Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45721.t1 | XP_013456369.1 | 95.3 | 548 | 25 | 1 | 1 | 547 | 1 | 548 | 8.50E-300 | 1038.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45721.t1 | Q9XIA4 | 71.2 | 500 | 140 | 2 | 48 | 543 | 48 | 547 | 1.3e-208 | 727.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45721.t1 | A0A072UX27 | 95.3 | 548 | 25 | 1 | 1 | 547 | 1 | 548 | 6.1e-300 | 1038.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050404 | MS.gene45721 | 0.839717 | 1.34E-57 | -1.69E-46 |
| MS.gene050406 | MS.gene45721 | 0.817743 | 2.82E-52 | -1.69E-46 |
| MS.gene050812 | MS.gene45721 | 0.836988 | 6.78E-57 | -1.69E-46 |
| MS.gene051171 | MS.gene45721 | 0.869456 | 3.06E-66 | -1.69E-46 |
| MS.gene051240 | MS.gene45721 | 0.811605 | 6.44E-51 | -1.69E-46 |
| MS.gene051242 | MS.gene45721 | 0.879489 | 1.19E-69 | -1.69E-46 |
| MS.gene051244 | MS.gene45721 | 0.882402 | 1.07E-70 | -1.69E-46 |
| MS.gene053330 | MS.gene45721 | 0.844558 | 7.02E-59 | -1.69E-46 |
| MS.gene053907 | MS.gene45721 | 0.813657 | 2.29E-51 | -1.69E-46 |
| MS.gene053971 | MS.gene45721 | 0.853591 | 2.16E-61 | -1.69E-46 |
| MS.gene055370 | MS.gene45721 | 0.82147 | 3.97E-53 | -1.69E-46 |
| MS.gene05553 | MS.gene45721 | 0.808977 | 2.38E-50 | -1.69E-46 |
| MS.gene055605 | MS.gene45721 | 0.832875 | 7.36E-56 | -1.69E-46 |
| MS.gene056305 | MS.gene45721 | 0.807178 | 5.74E-50 | -1.69E-46 |
| MS.gene056633 | MS.gene45721 | 0.875853 | 2.22E-68 | -1.69E-46 |
| MS.gene056664 | MS.gene45721 | 0.995512 | 5.12E-217 | -1.69E-46 |
| MS.gene056903 | MS.gene45721 | 0.827135 | 1.85E-54 | -1.69E-46 |
| MS.gene058233 | MS.gene45721 | 0.85036 | 1.79E-60 | -1.69E-46 |
| MS.gene058276 | MS.gene45721 | 0.841363 | 4.97E-58 | -1.69E-46 |
| MS.gene058743 | MS.gene45721 | 0.81431 | 1.64E-51 | -1.69E-46 |
| MS.gene058746 | MS.gene45721 | 0.886679 | 2.77E-72 | -1.69E-46 |
| MS.gene059512 | MS.gene45721 | 0.800446 | 1.44E-48 | -1.69E-46 |
| MS.gene059869 | MS.gene45721 | -0.800109 | 1.68E-48 | -1.69E-46 |
| MS.gene059894 | MS.gene45721 | 0.826001 | 3.45E-54 | -1.69E-46 |
| MS.gene060407 | MS.gene45721 | 0.883329 | 4.92E-71 | -1.69E-46 |
| MS.gene061231 | MS.gene45721 | 0.815159 | 1.07E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45721.t1 | MTR_4g069080 | 96.168 | 548 | 20 | 1 | 1 | 547 | 1 | 548 | 0.0 | 1088 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45721.t1 | AT1G49380 | 67.279 | 544 | 166 | 4 | 11 | 543 | 5 | 547 | 0.0 | 758 |
Find 130 sgRNAs with CRISPR-Local
Find 233 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCACACCATAAGGACCTTTC+TGG | 0.163357 | 4.4:-38461318 | None:intergenic |
| CTTGCAATGTTGGCCCTTCT+TGG | 0.176283 | 4.4:+38462351 | MS.gene45721:CDS |
| TCTAATTTGCCTTTGGCTAT+TGG | 0.216573 | 4.4:+38461376 | MS.gene45721:CDS |
| TTCTGGTTCTTTGAGCTTGC+TGG | 0.229099 | 4.4:-38461301 | None:intergenic |
| GACATGAATCTCTGTATTAA+AGG | 0.232537 | 4.4:-38463001 | None:intergenic |
| CAGAGCAAAGTTAGAGTTTC+CGG | 0.234060 | 4.4:+38464761 | MS.gene45721:CDS |
| AATGGAGATAAGAAACTTTA+TGG | 0.238655 | 4.4:+38463423 | MS.gene45721:CDS |
| GATGATGATTCAACTATTTC+AGG | 0.240407 | 4.4:-38464813 | None:intergenic |
| AGTGCAGCAGGGAGCTTTAA+AGG | 0.277235 | 4.4:+38462895 | MS.gene45721:CDS |
| TTATCTCCATTGATCTTTAG+AGG | 0.290427 | 4.4:-38463411 | None:intergenic |
| GATGATCTTCAGGGTAATTC+TGG | 0.298793 | 4.4:-38462254 | None:intergenic |
| CCTAACACAGGATGATCTTC+AGG | 0.304432 | 4.4:-38462264 | None:intergenic |
| GTGATACCATCATATCTTAA+AGG | 0.306162 | 4.4:-38463309 | None:intergenic |
| ATTTCCCTTCCTTATCATAA+AGG | 0.309945 | 4.4:-38464141 | None:intergenic |
| ACTCCAATCCGTCTGGTATA+TGG | 0.313882 | 4.4:-38463331 | None:intergenic |
| CACTCATCAAGGTTTCAAAA+AGG | 0.314179 | 4.4:+38462412 | MS.gene45721:CDS |
| TTGAGAAGACATTGATTCAT+AGG | 0.322099 | 4.4:-38461085 | None:intergenic |
| AGACGTCGGTACTATATTAA+TGG | 0.326408 | 4.4:+38462594 | MS.gene45721:CDS |
| CCTGAAGATCATCCTGTGTT+AGG | 0.327344 | 4.4:+38462264 | MS.gene45721:CDS |
| ATTGTCGTTGTTGATGCAAT+AGG | 0.332912 | 4.4:+38464220 | MS.gene45721:CDS |
| GATTCTCTCTAATTTGCCTT+TGG | 0.333030 | 4.4:+38461369 | MS.gene45721:CDS |
| TCATGTCAACAGATTCTCTA+TGG | 0.335451 | 4.4:+38463017 | MS.gene45721:CDS |
| GATGGGACAACAGTCGTTAT+TGG | 0.338022 | 4.4:+38464726 | MS.gene45721:CDS |
| GATAAGGAAGGGAAATTTGC+AGG | 0.341411 | 4.4:+38464148 | MS.gene45721:CDS |
| TTGTGTAAGTGCAGGCTATA+AGG | 0.342045 | 4.4:-38462380 | None:intergenic |
| TATAGCACTGCTGTTGATAA+TGG | 0.346092 | 4.4:+38462858 | MS.gene45721:CDS |
| TTGATTGGGAGCTTTGAATT+AGG | 0.356379 | 4.4:-38464181 | None:intergenic |
| TGTTAACTCTCCTGATGTTA+AGG | 0.369333 | 4.4:+38463467 | MS.gene45721:CDS |
| GTCAATTGTCCTTTATGATA+AGG | 0.380317 | 4.4:+38464132 | MS.gene45721:CDS |
| TCTGAGCCATCAATGTTGAT+TGG | 0.380893 | 4.4:-38464196 | None:intergenic |
| CTGAGCCATCAATGTTGATT+GGG | 0.384417 | 4.4:-38464195 | None:intergenic |
| AGGTTCAGTCACTGTGCCTC+AGG | 0.385654 | 4.4:+38462915 | MS.gene45721:CDS |
| ACCTATATTTCTTGCAATGT+TGG | 0.395976 | 4.4:+38462341 | MS.gene45721:CDS |
| GGTCAAGAAGTTGAGTAAAA+AGG | 0.404743 | 4.4:+38461339 | MS.gene45721:CDS |
| CCAGTTGTATATGCTGGATT+TGG | 0.416439 | 4.4:+38464376 | MS.gene45721:CDS |
| AAAACTCAGGTTTCTCGCCT+TGG | 0.423189 | 4.4:-38462227 | None:intergenic |
| GGTGCCATAGCCAAGTTATA+AGG | 0.424092 | 4.4:-38463390 | None:intergenic |
| AAGCTCCCAATCAACATTGA+TGG | 0.424320 | 4.4:+38464190 | MS.gene45721:CDS |
| AAGAACCAGAAAGGTCCTTA+TGG | 0.425770 | 4.4:+38461313 | MS.gene45721:CDS |
| TTGTCGTTGTTGATGCAATA+GGG | 0.434513 | 4.4:+38464221 | MS.gene45721:CDS |
| TGATACCATCATATCTTAAA+GGG | 0.444057 | 4.4:-38463308 | None:intergenic |
| GAGTAGTGGCTTGGACTTGA+AGG | 0.455565 | 4.4:+38464243 | MS.gene45721:CDS |
| GCCAACATTGCAAGAAATAT+AGG | 0.459699 | 4.4:-38462342 | None:intergenic |
| GACGTCGGTACTATATTAAT+GGG | 0.459990 | 4.4:+38462595 | MS.gene45721:CDS |
| TTCTCCTGTGTGAGTGGTGG+AGG | 0.465251 | 4.4:-38461253 | None:intergenic |
| GTTAACTCTCCTGATGTTAA+GGG | 0.468560 | 4.4:+38463468 | MS.gene45721:CDS |
| AGCAAGAGGTTCATCTCGTC+CGG | 0.469158 | 4.4:-38464780 | None:intergenic |
| ATGATGATTCAACTATTTCA+GGG | 0.471460 | 4.4:-38464812 | None:intergenic |
| GGAGGAACGTTAAGTGCAGC+AGG | 0.475028 | 4.4:+38462883 | MS.gene45721:CDS |
| AACTTCTTGACCACACCATA+AGG | 0.476566 | 4.4:-38461328 | None:intergenic |
| TCTATGGATTATTATGAAAG+TGG | 0.477182 | 4.4:+38463033 | MS.gene45721:CDS |
| TTAATATAGTACCGACGTCT+TGG | 0.478574 | 4.4:-38462591 | None:intergenic |
| CGATCTTTCCCTCTTGAACA+TGG | 0.481054 | 4.4:+38463245 | MS.gene45721:CDS |
| CTTTCCCTCTTGAACATGGA+TGG | 0.481191 | 4.4:+38463249 | MS.gene45721:CDS |
| TTTGAACAAGGGATGAAAAG+TGG | 0.482240 | 4.4:-38461113 | None:intergenic |
| AGTGCTATATGAACGCCAAC+AGG | 0.487373 | 4.4:-38462844 | None:intergenic |
| CCAAATCCAGCATATACAAC+TGG | 0.494043 | 4.4:-38464376 | None:intergenic |
| GCATATACAACTGGCACACC+AGG | 0.494175 | 4.4:-38464367 | None:intergenic |
| ACTTACATTCCCTTAACATC+AGG | 0.494664 | 4.4:-38463477 | None:intergenic |
| TTTGTTGTAGGAGATGTTCT+CGG | 0.496044 | 4.4:+38462946 | MS.gene45721:CDS |
| CTGAAATACTCCAATCCGTC+TGG | 0.496597 | 4.4:-38463338 | None:intergenic |
| CAGCTATTTATCTCATTCAC+AGG | 0.500481 | 4.4:+38464423 | MS.gene45721:CDS |
| CAATGAAGGACCTTATAACT+TGG | 0.502844 | 4.4:+38463380 | MS.gene45721:CDS |
| AAGATATGGGCTTTACAAGA+TGG | 0.504823 | 4.4:+38464708 | MS.gene45721:intron |
| TCTGTATTAAAGGCATCAGT+TGG | 0.505969 | 4.4:-38462991 | None:intergenic |
| AACACAACTTCCACTCATCA+AGG | 0.507125 | 4.4:+38462401 | MS.gene45721:CDS |
| GGAGATGTTCTCGGTCCTAC+CGG | 0.507387 | 4.4:+38462955 | MS.gene45721:CDS |
| ATAGCACTGCTGTTGATAAT+GGG | 0.512040 | 4.4:+38462859 | MS.gene45721:CDS |
| GGAGAGTTAACATCTCCAAC+AGG | 0.513280 | 4.4:-38463456 | None:intergenic |
| TGCAATAGGGAGTAGTGGCT+TGG | 0.516336 | 4.4:+38464234 | MS.gene45721:CDS |
| GGATTATAGGTATTCTTGAA+AGG | 0.517238 | 4.4:+38462778 | MS.gene45721:intron |
| ATTAATGGGAGCTGGATATG+AGG | 0.517838 | 4.4:+38462609 | MS.gene45721:CDS |
| CTATGGATTATTATGAAAGT+GGG | 0.518677 | 4.4:+38463034 | MS.gene45721:CDS |
| GGTGTGCCAGTTGTATATGC+TGG | 0.525293 | 4.4:+38464370 | MS.gene45721:CDS |
| ATTGTCCTTTATGATAAGGA+AGG | 0.526577 | 4.4:+38464136 | MS.gene45721:CDS |
| CAAATTCTCAAGGACAATGA+AGG | 0.527947 | 4.4:+38463366 | MS.gene45721:CDS |
| ATGGCACCTCTAAAGATCAA+TGG | 0.528038 | 4.4:+38463405 | MS.gene45721:CDS |
| GTCATTTATGCACTCTGCTG+AGG | 0.533358 | 4.4:+38462522 | MS.gene45721:CDS |
| GGTACTATATTAATGGGAGC+TGG | 0.536365 | 4.4:+38462601 | MS.gene45721:CDS |
| TCACCATATACCAGACGGAT+TGG | 0.537124 | 4.4:+38463328 | MS.gene45721:CDS |
| TTCAGCTCTGCAAATTCTCA+AGG | 0.537400 | 4.4:+38463356 | MS.gene45721:CDS |
| TGTGTCACATGATGTCTTTG+AGG | 0.540282 | 4.4:+38461059 | MS.gene45721:CDS |
| AACGACCCTTTAAGATATGA+TGG | 0.540927 | 4.4:+38463303 | MS.gene45721:CDS |
| ACGTCTTGGATTGATGCTCT+TGG | 0.547830 | 4.4:-38462577 | None:intergenic |
| GCCGGTCGGCTAGCTCCTGT+TGG | 0.547932 | 4.4:+38462829 | MS.gene45721:CDS |
| ATCTAAGCAAACTGATAGCA+TGG | 0.557916 | 4.4:+38464839 | MS.gene45721:CDS |
| TTGAACAAGGGATGAAAAGT+GGG | 0.557949 | 4.4:-38461112 | None:intergenic |
| TATAAGGGATGCACCAAGAA+GGG | 0.561371 | 4.4:-38462364 | None:intergenic |
| CTAACACAGGATGATCTTCA+GGG | 0.561639 | 4.4:-38462263 | None:intergenic |
| CTATAAGGGATGCACCAAGA+AGG | 0.562534 | 4.4:-38462365 | None:intergenic |
| TGTGTAAGTGCAGGCTATAA+GGG | 0.563934 | 4.4:-38462379 | None:intergenic |
| AGATATGGGCTTTACAAGAT+GGG | 0.567327 | 4.4:+38464709 | MS.gene45721:intron |
| CCACGAAAAGCATACAAAGT+TGG | 0.570654 | 4.4:-38462802 | None:intergenic |
| GCCAACAGGAGCTAGCCGAC+CGG | 0.571087 | 4.4:-38462830 | None:intergenic |
| CATAAAGGACAATTGACTGC+AGG | 0.571577 | 4.4:-38464126 | None:intergenic |
| CATGTTCAAGAGGGAAAGAT+CGG | 0.573438 | 4.4:-38463244 | None:intergenic |
| ATTAAAGGCATCAGTTGGAA+AGG | 0.574717 | 4.4:-38462986 | None:intergenic |
| TTGTCCTTTATGATAAGGAA+GGG | 0.575204 | 4.4:+38464137 | MS.gene45721:CDS |
| GCAAGCTCAAAGAACCAGAA+AGG | 0.582871 | 4.4:+38461304 | MS.gene45721:CDS |
| AGTTCTGTTGAATTTGAACA+AGG | 0.583852 | 4.4:-38461125 | None:intergenic |
| TGGATGGAAAAGAAGTAATG+AGG | 0.584497 | 4.4:+38463265 | MS.gene45721:CDS |
| GGGACAACAGTCGTTATTGG+AGG | 0.587821 | 4.4:+38464729 | MS.gene45721:CDS |
| TCATCATTCTCCTGTGTGAG+TGG | 0.588845 | 4.4:-38461259 | None:intergenic |
| TCATTCTCCTGTGTGAGTGG+TGG | 0.589165 | 4.4:-38461256 | None:intergenic |
| GGTTCAGTCACTGTGCCTCA+GGG | 0.589484 | 4.4:+38462916 | MS.gene45721:CDS |
| TGCAGTTGATGGTGAATGAG+AGG | 0.596112 | 4.4:-38461165 | None:intergenic |
| GTTGATGCAATAGGGAGTAG+TGG | 0.598418 | 4.4:+38464229 | MS.gene45721:CDS |
| TTCACCTCCACCACTCACAC+AGG | 0.605059 | 4.4:+38461249 | MS.gene45721:CDS |
| AGTTGGAAAGGAAAGAAAGC+CGG | 0.613737 | 4.4:-38462974 | None:intergenic |
| AGGACCTTATAACTTGGCTA+TGG | 0.614764 | 4.4:+38463386 | MS.gene45721:CDS |
| AACATTTCTCCAATAGCCAA+AGG | 0.619561 | 4.4:-38461385 | None:intergenic |
| TATGTTACGCAGACTGACCC+TGG | 0.626560 | 4.4:+38464349 | MS.gene45721:intron |
| GCAGTTGATGGTGAATGAGA+GGG | 0.632096 | 4.4:-38461164 | None:intergenic |
| TAATTCTGGAAATAAAACTC+AGG | 0.635294 | 4.4:-38462240 | None:intergenic |
| AAGTTGTGTTGTGTAAGTGC+AGG | 0.638222 | 4.4:-38462388 | None:intergenic |
| GGACAACAGTCGTTATTGGA+GGG | 0.644415 | 4.4:+38464730 | MS.gene45721:CDS |
| CCAGAAAGGTCCTTATGGTG+TGG | 0.650861 | 4.4:+38461318 | MS.gene45721:CDS |
| GAGAATGATGATATCAACAG+TGG | 0.661987 | 4.4:+38461271 | MS.gene45721:CDS |
| CTGCTGTTGATAATGGGTGG+AGG | 0.663763 | 4.4:+38462865 | MS.gene45721:CDS |
| TATGGATTATTATGAAAGTG+GGG | 0.664635 | 4.4:+38463035 | MS.gene45721:CDS |
| AATACATGTGATCAAAACCA+AGG | 0.672461 | 4.4:-38462314 | None:intergenic |
| TGGTATCACCATATACCAGA+CGG | 0.679132 | 4.4:+38463323 | MS.gene45721:CDS |
| GTTCTGTTGAATTTGAACAA+GGG | 0.681172 | 4.4:-38461124 | None:intergenic |
| GCACTGCTGTTGATAATGGG+TGG | 0.691436 | 4.4:+38462862 | MS.gene45721:CDS |
| GGATTATTATGAAAGTGGGG+AGG | 0.692179 | 4.4:+38463038 | MS.gene45721:CDS |
| CATATACAACTGGCACACCA+GGG | 0.701363 | 4.4:-38464366 | None:intergenic |
| GAGGAACGTTAAGTGCAGCA+GGG | 0.702940 | 4.4:+38462884 | MS.gene45721:CDS |
| GGAAAGGAAAGAAAGCCGGT+AGG | 0.713048 | 4.4:-38462970 | None:intergenic |
| AGAGCATCAATCCAAGACGT+CGG | 0.726779 | 4.4:+38462580 | MS.gene45721:CDS |
| ACAACAAAATTCAGACCCTG+AGG | 0.734369 | 4.4:-38462931 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAAGATATTTATAAAAAC+AGG | + | chr4.4:38461709-38461728 | MS.gene45721:intron | 10.0% |
| !!! | AAAAATCTTTTTTCTTTTAT+TGG | - | chr4.4:38463926-38463945 | None:intergenic | 10.0% |
| !!! | ATTTATAGATTTTTTTAAAG+AGG | + | chr4.4:38464536-38464555 | MS.gene45721:intron | 10.0% |
| !! | AATTAGATAATTGTAATAGT+TGG | + | chr4.4:38463895-38463914 | MS.gene45721:intron | 15.0% |
| !!! | AAAATGTAATTTTGGATTAT+AGG | + | chr4.4:38462765-38462784 | MS.gene45721:intron | 15.0% |
| !!! | AAAATTTTGAGAACTAAAAA+GGG | - | chr4.4:38461501-38461520 | None:intergenic | 15.0% |
| !!! | AAAGTATTCTTTTCAATATT+TGG | + | chr4.4:38463523-38463542 | MS.gene45721:intron | 15.0% |
| !!! | TAAAATTTTGAGAACTAAAA+AGG | - | chr4.4:38461502-38461521 | None:intergenic | 15.0% |
| !!! | TCTAATTAACAAAAGTATTA+TGG | - | chr4.4:38461735-38461754 | None:intergenic | 15.0% |
| !!! | TTTTAGTATATAATTGATCA+TGG | - | chr4.4:38464662-38464681 | None:intergenic | 15.0% |
| !!! | TTTTTCGTTTTATATGAAAT+TGG | + | chr4.4:38463071-38463090 | MS.gene45721:intron | 15.0% |
| !! | AAATTACAAATTAAGTGCAA+AGG | + | chr4.4:38463988-38464007 | MS.gene45721:intron | 20.0% |
| !! | AAATTATTCAAGTCTATTGT+TGG | - | chr4.4:38462732-38462751 | None:intergenic | 20.0% |
| !! | AACAAAATAGCAAAACAATA+AGG | - | chr4.4:38463178-38463197 | None:intergenic | 20.0% |
| !! | ATAAATGACTAAGATATGTT+TGG | - | chr4.4:38462107-38462126 | None:intergenic | 20.0% |
| !! | ATTAGCATATTGTCAAAATA+AGG | + | chr4.4:38463954-38463973 | MS.gene45721:intron | 20.0% |
| !! | TAAAAATGAGCAAATAACAT+TGG | + | chr4.4:38464613-38464632 | MS.gene45721:intron | 20.0% |
| !! | TATATAATTGATCATGGATA+AGG | - | chr4.4:38464656-38464675 | None:intergenic | 20.0% |
| !! | TTTGATCAATTGAAAGATAT+GGG | + | chr4.4:38464695-38464714 | MS.gene45721:intron | 20.0% |
| !!! | AATGTTATTTGCTCATTTTT+AGG | - | chr4.4:38464614-38464633 | None:intergenic | 20.0% |
| !!! | TAGTTCTCAAAATTTTACTT+AGG | + | chr4.4:38461505-38461524 | MS.gene45721:intron | 20.0% |
| !!! | TTAATTTTGATAAGTTCTCT+AGG | + | chr4.4:38463714-38463733 | MS.gene45721:intron | 20.0% |
| !!! | TTTAGATAAAAGTGTGTTTA+CGG | + | chr4.4:38461932-38461951 | MS.gene45721:intron | 20.0% |
| !!! | TTTTGATCAATTGAAAGATA+TGG | + | chr4.4:38464694-38464713 | MS.gene45721:intron | 20.0% |
| ! | AATGGAGATAAGAAACTTTA+TGG | + | chr4.4:38463423-38463442 | MS.gene45721:CDS | 25.0% |
| ! | AGTGACATAAACAACTTATT+TGG | + | chr4.4:38463603-38463622 | MS.gene45721:intron | 25.0% |
| ! | ATCAGATAATTGAAGTAGTT+AGG | + | chr4.4:38463859-38463878 | MS.gene45721:intron | 25.0% |
| ! | ATCGAATAAGCACTTAATTA+AGG | + | chr4.4:38463793-38463812 | MS.gene45721:intron | 25.0% |
| ! | ATGATGATTCAACTATTTCA+GGG | - | chr4.4:38464815-38464834 | None:intergenic | 25.0% |
| ! | GCTAACATATACTTATCATA+TGG | - | chr4.4:38461876-38461895 | None:intergenic | 25.0% |
| ! | GGGTGAACTTTAAATTATTA+TGG | + | chr4.4:38461797-38461816 | MS.gene45721:intron | 25.0% |
| ! | TAAATGAAAATAACCAGACT+TGG | - | chr4.4:38464281-38464300 | None:intergenic | 25.0% |
| ! | TAGATAATTGTAATAGTTGG+AGG | + | chr4.4:38463898-38463917 | MS.gene45721:intron | 25.0% |
| ! | TCACTAAAGACAAATTTCTA+TGG | + | chr4.4:38462188-38462207 | MS.gene45721:intron | 25.0% |
| ! | TCTATAAATGAAAGCAACAT+TGG | - | chr4.4:38464525-38464544 | None:intergenic | 25.0% |
| ! | TGATACCATCATATCTTAAA+GGG | - | chr4.4:38463311-38463330 | None:intergenic | 25.0% |
| !! | AATGACTTTTAGGCTATATT+TGG | + | chr4.4:38463580-38463599 | MS.gene45721:intron | 25.0% |
| !! | ATATACACTTTGACTTATTC+TGG | - | chr4.4:38463134-38463153 | None:intergenic | 25.0% |
| !! | ATGTTTTCGATTTATGTTAC+AGG | + | chr4.4:38463206-38463225 | MS.gene45721:intron | 25.0% |
| !! | CTATGGATTATTATGAAAGT+GGG | + | chr4.4:38463034-38463053 | MS.gene45721:CDS | 25.0% |
| !! | TAATTAAGGTATTCATCCAA+AGG | + | chr4.4:38463807-38463826 | MS.gene45721:intron | 25.0% |
| !! | TAATTCTGGAAATAAAACTC+AGG | - | chr4.4:38462243-38462262 | None:intergenic | 25.0% |
| !! | TATGGATTATTATGAAAGTG+GGG | + | chr4.4:38463035-38463054 | MS.gene45721:CDS | 25.0% |
| !! | TCTATGGATTATTATGAAAG+TGG | + | chr4.4:38463033-38463052 | MS.gene45721:CDS | 25.0% |
| !!! | ATTGCTTTTTTAATGGGTTT+GGG | + | chr4.4:38461412-38461431 | MS.gene45721:CDS | 25.0% |
| !!! | CGCATTTAAAATTGATTTTG+AGG | - | chr4.4:38462163-38462182 | None:intergenic | 25.0% |
| !!! | TTCACCATTGCTTTTTTAAT+GGG | + | chr4.4:38461406-38461425 | MS.gene45721:CDS | 25.0% |
| AAATAGTCAAGTGTGAATCA+TGG | - | chr4.4:38462648-38462667 | None:intergenic | 30.0% | |
| AATACATGTGATCAAAACCA+AGG | - | chr4.4:38462317-38462336 | None:intergenic | 30.0% | |
| AATGACTAAGATATGTTTGG+TGG | - | chr4.4:38462104-38462123 | None:intergenic | 30.0% | |
| ACCTATATTTCTTGCAATGT+TGG | + | chr4.4:38462341-38462360 | MS.gene45721:CDS | 30.0% | |
| AGTTCTGTTGAATTTGAACA+AGG | - | chr4.4:38461128-38461147 | None:intergenic | 30.0% | |
| ATATAGCCTAAAAGTCATTG+AGG | - | chr4.4:38463579-38463598 | None:intergenic | 30.0% | |
| ATCAAGGTTTCAAAAAGGTT+TGG | + | chr4.4:38462417-38462436 | MS.gene45721:intron | 30.0% | |
| ATTGTCCTTTATGATAAGGA+AGG | + | chr4.4:38464136-38464155 | MS.gene45721:CDS | 30.0% | |
| ATTTCCCTTCCTTATCATAA+AGG | - | chr4.4:38464144-38464163 | None:intergenic | 30.0% | |
| CAAACCCATTAAAAAAGCAA+TGG | - | chr4.4:38461413-38461432 | None:intergenic | 30.0% | |
| CAAGTAAAAAATCCTAACAC+AGG | - | chr4.4:38462279-38462298 | None:intergenic | 30.0% | |
| GACATGAATCTCTGTATTAA+AGG | - | chr4.4:38463004-38463023 | None:intergenic | 30.0% | |
| GATGATGATTCAACTATTTC+AGG | - | chr4.4:38464816-38464835 | None:intergenic | 30.0% | |
| GGATTATAGGTATTCTTGAA+AGG | + | chr4.4:38462778-38462797 | MS.gene45721:intron | 30.0% | |
| GTCAATTGTCCTTTATGATA+AGG | + | chr4.4:38464132-38464151 | MS.gene45721:CDS | 30.0% | |
| GTGATACCATCATATCTTAA+AGG | - | chr4.4:38463312-38463331 | None:intergenic | 30.0% | |
| GTTCTGTTGAATTTGAACAA+GGG | - | chr4.4:38461127-38461146 | None:intergenic | 30.0% | |
| TAAAGACAAATTTCTATGGC+AGG | + | chr4.4:38462192-38462211 | MS.gene45721:intron | 30.0% | |
| TAACATAAGCATTAGGCAAT+AGG | - | chr4.4:38464336-38464355 | None:intergenic | 30.0% | |
| TTATCTCCATTGATCTTTAG+AGG | - | chr4.4:38463414-38463433 | None:intergenic | 30.0% | |
| TTGTCCTTTATGATAAGGAA+GGG | + | chr4.4:38464137-38464156 | MS.gene45721:CDS | 30.0% | |
| ! | AATATTTTCACGTGAAAGTG+AGG | + | chr4.4:38461973-38461992 | MS.gene45721:intron | 30.0% |
| ! | GCGCTAACAAAATGTAATTT+TGG | + | chr4.4:38462757-38462776 | MS.gene45721:intron | 30.0% |
| ! | TAAGTATATGTTAGCTTCTG+TGG | + | chr4.4:38461881-38461900 | MS.gene45721:intron | 30.0% |
| ! | TTTTCTGTGTTCATAATGCT+TGG | + | chr4.4:38462452-38462471 | MS.gene45721:intron | 30.0% |
| !! | TTGAGAAGACATTGATTCAT+AGG | - | chr4.4:38461088-38461107 | None:intergenic | 30.0% |
| !!! | CATTGCTTTTTTAATGGGTT+TGG | + | chr4.4:38461411-38461430 | MS.gene45721:CDS | 30.0% |
| !!! | CTGTGTTAGGATTTTTTACT+TGG | + | chr4.4:38462277-38462296 | MS.gene45721:CDS | 30.0% |
| !!! | GTTCACCATTGCTTTTTTAA+TGG | + | chr4.4:38461405-38461424 | MS.gene45721:CDS | 30.0% |
| !!! | TAGGATTTTTTACTTGGAGA+TGG | + | chr4.4:38462283-38462302 | MS.gene45721:CDS | 30.0% |
| !!! | TATTCTTTCCCTTGTTTTTG+AGG | - | chr4.4:38461192-38461211 | None:intergenic | 30.0% |
| AACATTTCTCCAATAGCCAA+AGG | - | chr4.4:38461388-38461407 | None:intergenic | 35.0% | |
| AACTGCAACCTCAAAAACAA+GGG | + | chr4.4:38461181-38461200 | MS.gene45721:CDS | 35.0% | |
| AAGATATGGGCTTTACAAGA+TGG | + | chr4.4:38464708-38464727 | MS.gene45721:intron | 35.0% | |
| ACTTACATTCCCTTAACATC+AGG | - | chr4.4:38463480-38463499 | None:intergenic | 35.0% | |
| AGACGTCGGTACTATATTAA+TGG | + | chr4.4:38462594-38462613 | MS.gene45721:CDS | 35.0% | |
| AGATATGGGCTTTACAAGAT+GGG | + | chr4.4:38464709-38464728 | MS.gene45721:intron | 35.0% | |
| AGCCTTCGTAAATACTCTTT+AGG | - | chr4.4:38463650-38463669 | None:intergenic | 35.0% | |
| AGTCTAAAAATCACGATCGA+AGG | + | chr4.4:38462011-38462030 | MS.gene45721:intron | 35.0% | |
| ATCTAAGCAAACTGATAGCA+TGG | + | chr4.4:38464839-38464858 | MS.gene45721:CDS | 35.0% | |
| ATTATAGGCTAGGACTTGAT+AGG | + | chr4.4:38464017-38464036 | MS.gene45721:intron | 35.0% | |
| ATTGTCGTTGTTGATGCAAT+AGG | + | chr4.4:38464220-38464239 | MS.gene45721:CDS | 35.0% | |
| CAAATTCTCAAGGACAATGA+AGG | + | chr4.4:38463366-38463385 | MS.gene45721:CDS | 35.0% | |
| CAATGAAGGACCTTATAACT+TGG | + | chr4.4:38463380-38463399 | MS.gene45721:CDS | 35.0% | |
| CACTCATCAAGGTTTCAAAA+AGG | + | chr4.4:38462412-38462431 | MS.gene45721:CDS | 35.0% | |
| CAGCTATTTATCTCATTCAC+AGG | + | chr4.4:38464423-38464442 | MS.gene45721:CDS | 35.0% | |
| GACCATCTACGAAACAAATA+AGG | - | chr4.4:38462505-38462524 | None:intergenic | 35.0% | |
| GACGTCGGTACTATATTAAT+GGG | + | chr4.4:38462595-38462614 | MS.gene45721:CDS | 35.0% | |
| GAGAATGATGATATCAACAG+TGG | + | chr4.4:38461271-38461290 | MS.gene45721:CDS | 35.0% | |
| GCCAACATTGCAAGAAATAT+AGG | - | chr4.4:38462345-38462364 | None:intergenic | 35.0% | |
| GGTCAAGAAGTTGAGTAAAA+AGG | + | chr4.4:38461339-38461358 | MS.gene45721:CDS | 35.0% | |
| GTTAACTCTCCTGATGTTAA+GGG | + | chr4.4:38463468-38463487 | MS.gene45721:CDS | 35.0% | |
| TATCAAGTCCTAGCCTATAA+TGG | - | chr4.4:38464018-38464037 | None:intergenic | 35.0% | |
| TCATGTCAACAGATTCTCTA+TGG | + | chr4.4:38463017-38463036 | MS.gene45721:CDS | 35.0% | |
| TCCTCAAGTTTGTGAATTGT+GGG | + | chr4.4:38461777-38461796 | MS.gene45721:intron | 35.0% | |
| TGGATGGAAAAGAAGTAATG+AGG | + | chr4.4:38463265-38463284 | MS.gene45721:CDS | 35.0% | |
| TGTTAACTCTCCTGATGTTA+AGG | + | chr4.4:38463467-38463486 | MS.gene45721:CDS | 35.0% | |
| TTATGCATATGGCATTTGTC+TGG | - | chr4.4:38464581-38464600 | None:intergenic | 35.0% | |
| TTCCTCAAGTTTGTGAATTG+TGG | + | chr4.4:38461776-38461795 | MS.gene45721:intron | 35.0% | |
| TTGAACAAGGGATGAAAAGT+GGG | - | chr4.4:38461115-38461134 | None:intergenic | 35.0% | |
| TTGTCGTTGTTGATGCAATA+GGG | + | chr4.4:38464221-38464240 | MS.gene45721:CDS | 35.0% | |
| TTTGAACAAGGGATGAAAAG+TGG | - | chr4.4:38461116-38461135 | None:intergenic | 35.0% | |
| ! | GATTCTCTCTAATTTGCCTT+TGG | + | chr4.4:38461369-38461388 | MS.gene45721:CDS | 35.0% |
| ! | GCATTTCCTCAATGACTTTT+AGG | + | chr4.4:38463570-38463589 | MS.gene45721:intron | 35.0% |
| ! | GGTTTCAAAAAGGTTTGGTT+TGG | + | chr4.4:38462422-38462441 | MS.gene45721:intron | 35.0% |
| ! | TATAGCACTGCTGTTGATAA+TGG | + | chr4.4:38462858-38462877 | MS.gene45721:CDS | 35.0% |
| ! | TATGGTACTTTTCTACCTGT+TGG | + | chr4.4:38463441-38463460 | MS.gene45721:CDS | 35.0% |
| ! | TCTAATTTGCCTTTGGCTAT+TGG | + | chr4.4:38461376-38461395 | MS.gene45721:CDS | 35.0% |
| ! | TGAGTTTATTTGCTGACGTA+AGG | + | chr4.4:38461549-38461568 | MS.gene45721:intron | 35.0% |
| ! | TTTGTTGTAGGAGATGTTCT+CGG | + | chr4.4:38462946-38462965 | MS.gene45721:CDS | 35.0% |
| ! | TTTTCCATCCATGTTCAAGA+GGG | - | chr4.4:38463256-38463275 | None:intergenic | 35.0% |
| !! | AACGACCCTTTAAGATATGA+TGG | + | chr4.4:38463303-38463322 | MS.gene45721:CDS | 35.0% |
| !! | AAGCTTTGAAAACTGTTCCT+AGG | + | chr4.4:38463546-38463565 | MS.gene45721:intron | 35.0% |
| !! | AGCCTTATTTGTTTCGTAGA+TGG | + | chr4.4:38462500-38462519 | MS.gene45721:intron | 35.0% |
| !! | ATAGCACTGCTGTTGATAAT+GGG | + | chr4.4:38462859-38462878 | MS.gene45721:CDS | 35.0% |
| !! | ATTAAAGGCATCAGTTGGAA+AGG | - | chr4.4:38462989-38463008 | None:intergenic | 35.0% |
| !! | CACCTAAAGAGTATTTACGA+AGG | + | chr4.4:38463645-38463664 | MS.gene45721:intron | 35.0% |
| !! | TCTGTATTAAAGGCATCAGT+TGG | - | chr4.4:38462994-38463013 | None:intergenic | 35.0% |
| !! | TTAATATAGTACCGACGTCT+TGG | - | chr4.4:38462594-38462613 | None:intergenic | 35.0% |
| !! | TTGATTGGGAGCTTTGAATT+AGG | - | chr4.4:38464184-38464203 | None:intergenic | 35.0% |
| !!! | CTTTTTGAAACCTTGATGAG+TGG | - | chr4.4:38462414-38462433 | None:intergenic | 35.0% |
| AACACAACTTCCACTCATCA+AGG | + | chr4.4:38462401-38462420 | MS.gene45721:CDS | 40.0% | |
| AACTTCTTGACCACACCATA+AGG | - | chr4.4:38461331-38461350 | None:intergenic | 40.0% | |
| AAGAACCAGAAAGGTCCTTA+TGG | + | chr4.4:38461313-38461332 | MS.gene45721:CDS | 40.0% | |
| AAGCTCCCAATCAACATTGA+TGG | + | chr4.4:38464190-38464209 | MS.gene45721:CDS | 40.0% | |
| AAGGACTACCATTATAGGCT+AGG | + | chr4.4:38464007-38464026 | MS.gene45721:intron | 40.0% | |
| AAGTTGTGTTGTGTAAGTGC+AGG | - | chr4.4:38462391-38462410 | None:intergenic | 40.0% | |
| ACAACAAAATTCAGACCCTG+AGG | - | chr4.4:38462934-38462953 | None:intergenic | 40.0% | |
| ACCCACAATTCACAAACTTG+AGG | - | chr4.4:38461781-38461800 | None:intergenic | 40.0% | |
| AGGACCTTATAACTTGGCTA+TGG | + | chr4.4:38463386-38463405 | MS.gene45721:CDS | 40.0% | |
| AGGAGTCCTTAGTGAATGAT+TGG | + | chr4.4:38463827-38463846 | MS.gene45721:intron | 40.0% | |
| AGTCCTTAGTGAATGATTGG+GGG | + | chr4.4:38463830-38463849 | MS.gene45721:intron | 40.0% | |
| AGTTGGAAAGGAAAGAAAGC+CGG | - | chr4.4:38462977-38462996 | None:intergenic | 40.0% | |
| ATTAATGGGAGCTGGATATG+AGG | + | chr4.4:38462609-38462628 | MS.gene45721:CDS | 40.0% | |
| CAACTGCAACCTCAAAAACA+AGG | + | chr4.4:38461180-38461199 | MS.gene45721:CDS | 40.0% | |
| CAGAGCAAAGTTAGAGTTTC+CGG | + | chr4.4:38464761-38464780 | MS.gene45721:CDS | 40.0% | |
| CATAAAGGACAATTGACTGC+AGG | - | chr4.4:38464129-38464148 | None:intergenic | 40.0% | |
| CATGTTCAAGAGGGAAAGAT+CGG | - | chr4.4:38463247-38463266 | None:intergenic | 40.0% | |
| CCAAATCCAGCATATACAAC+TGG | - | chr4.4:38464379-38464398 | None:intergenic | 40.0% | |
| CCAGTTGTATATGCTGGATT+TGG | + | chr4.4:38464376-38464395 | MS.gene45721:CDS | 40.0% | |
| CTAACACAGGATGATCTTCA+GGG | - | chr4.4:38462266-38462285 | None:intergenic | 40.0% | |
| GAGTCCTTAGTGAATGATTG+GGG | + | chr4.4:38463829-38463848 | MS.gene45721:intron | 40.0% | |
| GATAAGGAAGGGAAATTTGC+AGG | + | chr4.4:38464148-38464167 | MS.gene45721:CDS | 40.0% | |
| GATGATCTTCAGGGTAATTC+TGG | - | chr4.4:38462257-38462276 | None:intergenic | 40.0% | |
| GCGTCGTCTAATTATGCATA+TGG | - | chr4.4:38464592-38464611 | None:intergenic | 40.0% | |
| GGAGTCCTTAGTGAATGATT+GGG | + | chr4.4:38463828-38463847 | MS.gene45721:intron | 40.0% | |
| GGATTATTATGAAAGTGGGG+AGG | + | chr4.4:38463038-38463057 | MS.gene45721:CDS | 40.0% | |
| GGTACTATATTAATGGGAGC+TGG | + | chr4.4:38462601-38462620 | MS.gene45721:CDS | 40.0% | |
| GTCTGCGTAACATAAGCATT+AGG | - | chr4.4:38464343-38464362 | None:intergenic | 40.0% | |
| GTGCAAAGGACTACCATTAT+AGG | + | chr4.4:38464002-38464021 | MS.gene45721:intron | 40.0% | |
| TAGGACTTGATAGGTCATTC+TGG | + | chr4.4:38464026-38464045 | MS.gene45721:intron | 40.0% | |
| TATAAGGGATGCACCAAGAA+GGG | - | chr4.4:38462367-38462386 | None:intergenic | 40.0% | |
| TCATTCACTAAGGACTCCTT+TGG | - | chr4.4:38463826-38463845 | None:intergenic | 40.0% | |
| TCTGAGCCATCAATGTTGAT+TGG | - | chr4.4:38464199-38464218 | None:intergenic | 40.0% | |
| TGGTATCACCATATACCAGA+CGG | + | chr4.4:38463323-38463342 | MS.gene45721:CDS | 40.0% | |
| TGTGTAAGTGCAGGCTATAA+GGG | - | chr4.4:38462382-38462401 | None:intergenic | 40.0% | |
| TGTGTCACATGATGTCTTTG+AGG | + | chr4.4:38461059-38461078 | MS.gene45721:CDS | 40.0% | |
| TTCAGCTCTGCAAATTCTCA+AGG | + | chr4.4:38463356-38463375 | MS.gene45721:CDS | 40.0% | |
| TTGTGTAAGTGCAGGCTATA+AGG | - | chr4.4:38462383-38462402 | None:intergenic | 40.0% | |
| ! | AGAGTATTTACGAAGGCTTG+TGG | + | chr4.4:38463652-38463671 | MS.gene45721:intron | 40.0% |
| ! | ATGGCACCTCTAAAGATCAA+TGG | + | chr4.4:38463405-38463424 | MS.gene45721:CDS | 40.0% |
| ! | CCAACTTTGTATGCTTTTCG+TGG | + | chr4.4:38462802-38462821 | MS.gene45721:CDS | 40.0% |
| ! | CCACGAAAAGCATACAAAGT+TGG | - | chr4.4:38462805-38462824 | None:intergenic | 40.0% |
| ! | CTGAGCCATCAATGTTGATT+GGG | - | chr4.4:38464198-38464217 | None:intergenic | 40.0% |
| ! | CTTTTCCATCCATGTTCAAG+AGG | - | chr4.4:38463257-38463276 | None:intergenic | 40.0% |
| !! | CAGGGTCTGAATTTTGTTGT+AGG | + | chr4.4:38462934-38462953 | MS.gene45721:CDS | 40.0% |
| !! | TGGAGATGGATTTTCTTCCT+TGG | + | chr4.4:38462297-38462316 | MS.gene45721:CDS | 40.0% |
| !!! | GTTTTTGAGGTTGCAGTTGA+TGG | - | chr4.4:38461179-38461198 | None:intergenic | 40.0% |
| AAAACTCAGGTTTCTCGCCT+TGG | - | chr4.4:38462230-38462249 | None:intergenic | 45.0% | |
| ACGTCTTGGATTGATGCTCT+TGG | - | chr4.4:38462580-38462599 | None:intergenic | 45.0% | |
| ACTCCAATCCGTCTGGTATA+TGG | - | chr4.4:38463334-38463353 | None:intergenic | 45.0% | |
| AGGCAATAGGTCAGTGACAA+AGG | - | chr4.4:38464323-38464342 | None:intergenic | 45.0% | |
| AGTGCTATATGAACGCCAAC+AGG | - | chr4.4:38462847-38462866 | None:intergenic | 45.0% | |
| CATATACAACTGGCACACCA+GGG | - | chr4.4:38464369-38464388 | None:intergenic | 45.0% | |
| CCTAACACAGGATGATCTTC+AGG | - | chr4.4:38462267-38462286 | None:intergenic | 45.0% | |
| CCTGAAGATCATCCTGTGTT+AGG | + | chr4.4:38462264-38462283 | MS.gene45721:CDS | 45.0% | |
| CGATCTTTCCCTCTTGAACA+TGG | + | chr4.4:38463245-38463264 | MS.gene45721:CDS | 45.0% | |
| CTATAAGGGATGCACCAAGA+AGG | - | chr4.4:38462368-38462387 | None:intergenic | 45.0% | |
| CTGAAATACTCCAATCCGTC+TGG | - | chr4.4:38463341-38463360 | None:intergenic | 45.0% | |
| CTTTCCCTCTTGAACATGGA+TGG | + | chr4.4:38463249-38463268 | MS.gene45721:CDS | 45.0% | |
| GATGGGACAACAGTCGTTAT+TGG | + | chr4.4:38464726-38464745 | MS.gene45721:CDS | 45.0% | |
| GCAAGCTCAAAGAACCAGAA+AGG | + | chr4.4:38461304-38461323 | MS.gene45721:CDS | 45.0% | |
| GGACAACAGTCGTTATTGGA+GGG | + | chr4.4:38464730-38464749 | MS.gene45721:CDS | 45.0% | |
| GGAGAGTTAACATCTCCAAC+AGG | - | chr4.4:38463459-38463478 | None:intergenic | 45.0% | |
| GTCATTGAGGAAATGCTCCT+AGG | - | chr4.4:38463566-38463585 | None:intergenic | 45.0% | |
| GTCATTTATGCACTCTGCTG+AGG | + | chr4.4:38462522-38462541 | MS.gene45721:CDS | 45.0% | |
| GTGTGAGATTAAGCCAAGTC+TGG | + | chr4.4:38464265-38464284 | MS.gene45721:intron | 45.0% | |
| GTTGATGCAATAGGGAGTAG+TGG | + | chr4.4:38464229-38464248 | MS.gene45721:CDS | 45.0% | |
| TCACCATATACCAGACGGAT+TGG | + | chr4.4:38463328-38463347 | MS.gene45721:CDS | 45.0% | |
| TCATCATTCTCCTGTGTGAG+TGG | - | chr4.4:38461262-38461281 | None:intergenic | 45.0% | |
| TCTCCCCCAATCATTCACTA+AGG | - | chr4.4:38463836-38463855 | None:intergenic | 45.0% | |
| ! | AGAGCATCAATCCAAGACGT+CGG | + | chr4.4:38462580-38462599 | MS.gene45721:CDS | 45.0% |
| ! | CAGGGATTTTGTCAAGCAAG+AGG | - | chr4.4:38464797-38464816 | None:intergenic | 45.0% |
| ! | GCAGGCACTTTTATTGACCA+AGG | + | chr4.4:38462210-38462229 | MS.gene45721:intron | 45.0% |
| ! | GGTGCCATAGCCAAGTTATA+AGG | - | chr4.4:38463393-38463412 | None:intergenic | 45.0% |
| ! | TATGCTTTTCGTGGACTTGC+CGG | + | chr4.4:38462811-38462830 | MS.gene45721:CDS | 45.0% |
| !! | GCAGTTGATGGTGAATGAGA+GGG | - | chr4.4:38461167-38461186 | None:intergenic | 45.0% |
| !! | TGCAGTTGATGGTGAATGAG+AGG | - | chr4.4:38461168-38461187 | None:intergenic | 45.0% |
| !! | TTCTGGTTCTTTGAGCTTGC+TGG | - | chr4.4:38461304-38461323 | None:intergenic | 45.0% |
| !!! | TTGAATTTTTTTTTTTTTTT+TGG | + | chr4.4:38461633-38461652 | MS.gene45721:intron | 5.0% |
| !!! | TTTTTATAAATATCTTAATT+AGG | - | chr4.4:38461708-38461727 | None:intergenic | 5.0% |
| AGCAAGAGGTTCATCTCGTC+CGG | - | chr4.4:38464783-38464802 | None:intergenic | 50.0% | |
| CCACACCATAAGGACCTTTC+TGG | - | chr4.4:38461321-38461340 | None:intergenic | 50.0% | |
| CCAGAAAGGTCCTTATGGTG+TGG | + | chr4.4:38461318-38461337 | MS.gene45721:CDS | 50.0% | |
| CTTGCAATGTTGGCCCTTCT+TGG | + | chr4.4:38462351-38462370 | MS.gene45721:CDS | 50.0% | |
| GAGGAACGTTAAGTGCAGCA+GGG | + | chr4.4:38462884-38462903 | MS.gene45721:CDS | 50.0% | |
| GCATATACAACTGGCACACC+AGG | - | chr4.4:38464370-38464389 | None:intergenic | 50.0% | |
| GGAAAGGAAAGAAAGCCGGT+AGG | - | chr4.4:38462973-38462992 | None:intergenic | 50.0% | |
| GGGACAACAGTCGTTATTGG+AGG | + | chr4.4:38464729-38464748 | MS.gene45721:CDS | 50.0% | |
| GGTGTGCCAGTTGTATATGC+TGG | + | chr4.4:38464370-38464389 | MS.gene45721:CDS | 50.0% | |
| TATGTTACGCAGACTGACCC+TGG | + | chr4.4:38464349-38464368 | MS.gene45721:intron | 50.0% | |
| TCATTCTCCTGTGTGAGTGG+TGG | - | chr4.4:38461259-38461278 | None:intergenic | 50.0% | |
| TGCAATAGGGAGTAGTGGCT+TGG | + | chr4.4:38464234-38464253 | MS.gene45721:CDS | 50.0% | |
| ! | AGTGCAGCAGGGAGCTTTAA+AGG | + | chr4.4:38462895-38462914 | MS.gene45721:CDS | 50.0% |
| ! | GAGTAGTGGCTTGGACTTGA+AGG | + | chr4.4:38464243-38464262 | MS.gene45721:CDS | 50.0% |
| !! | CTGCTGTTGATAATGGGTGG+AGG | + | chr4.4:38462865-38462884 | MS.gene45721:CDS | 50.0% |
| !! | GCACTGCTGTTGATAATGGG+TGG | + | chr4.4:38462862-38462881 | MS.gene45721:CDS | 50.0% |
| AGGTTCAGTCACTGTGCCTC+AGG | + | chr4.4:38462915-38462934 | MS.gene45721:CDS | 55.0% | |
| GGAGATGTTCTCGGTCCTAC+CGG | + | chr4.4:38462955-38462974 | MS.gene45721:CDS | 55.0% | |
| GGAGGAACGTTAAGTGCAGC+AGG | + | chr4.4:38462883-38462902 | MS.gene45721:CDS | 55.0% | |
| GGTTCAGTCACTGTGCCTCA+GGG | + | chr4.4:38462916-38462935 | MS.gene45721:CDS | 55.0% | |
| TTCACCTCCACCACTCACAC+AGG | + | chr4.4:38461249-38461268 | MS.gene45721:CDS | 55.0% | |
| TTCTCCTGTGTGAGTGGTGG+AGG | - | chr4.4:38461256-38461275 | None:intergenic | 55.0% | |
| ! | CTTTTCGTGGACTTGCCGGT+CGG | + | chr4.4:38462815-38462834 | MS.gene45721:CDS | 55.0% |
| GCCAACAGGAGCTAGCCGAC+CGG | - | chr4.4:38462833-38462852 | None:intergenic | 65.0% | |
| ! | GCCGGTCGGCTAGCTCCTGT+TGG | + | chr4.4:38462829-38462848 | MS.gene45721:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 38461058 | 38464869 | 38461058 | ID=MS.gene45721 |
| chr4.4 | mRNA | 38461058 | 38464869 | 38461058 | ID=MS.gene45721.t1;Parent=MS.gene45721 |
| chr4.4 | exon | 38461058 | 38461433 | 38461058 | ID=MS.gene45721.t1.exon1;Parent=MS.gene45721.t1 |
| chr4.4 | CDS | 38461058 | 38461433 | 38461058 | ID=cds.MS.gene45721.t1;Parent=MS.gene45721.t1 |
| chr4.4 | exon | 38462214 | 38462433 | 38462214 | ID=MS.gene45721.t1.exon2;Parent=MS.gene45721.t1 |
| chr4.4 | CDS | 38462214 | 38462433 | 38462214 | ID=cds.MS.gene45721.t1;Parent=MS.gene45721.t1 |
| chr4.4 | exon | 38462519 | 38462630 | 38462519 | ID=MS.gene45721.t1.exon3;Parent=MS.gene45721.t1 |
| chr4.4 | CDS | 38462519 | 38462630 | 38462519 | ID=cds.MS.gene45721.t1;Parent=MS.gene45721.t1 |
| chr4.4 | exon | 38462787 | 38463059 | 38462787 | ID=MS.gene45721.t1.exon4;Parent=MS.gene45721.t1 |
| chr4.4 | CDS | 38462787 | 38463059 | 38462787 | ID=cds.MS.gene45721.t1;Parent=MS.gene45721.t1 |
| chr4.4 | exon | 38463228 | 38463493 | 38463228 | ID=MS.gene45721.t1.exon5;Parent=MS.gene45721.t1 |
| chr4.4 | CDS | 38463228 | 38463493 | 38463228 | ID=cds.MS.gene45721.t1;Parent=MS.gene45721.t1 |
| chr4.4 | exon | 38464108 | 38464264 | 38464108 | ID=MS.gene45721.t1.exon6;Parent=MS.gene45721.t1 |
| chr4.4 | CDS | 38464108 | 38464264 | 38464108 | ID=cds.MS.gene45721.t1;Parent=MS.gene45721.t1 |
| chr4.4 | exon | 38464361 | 38464444 | 38464361 | ID=MS.gene45721.t1.exon7;Parent=MS.gene45721.t1 |
| chr4.4 | CDS | 38464361 | 38464444 | 38464361 | ID=cds.MS.gene45721.t1;Parent=MS.gene45721.t1 |
| chr4.4 | exon | 38464711 | 38464869 | 38464711 | ID=MS.gene45721.t1.exon8;Parent=MS.gene45721.t1 |
| chr4.4 | CDS | 38464711 | 38464869 | 38464711 | ID=cds.MS.gene45721.t1;Parent=MS.gene45721.t1 |
| Gene Sequence |
| Protein sequence |
