AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene055605


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene055605.t1 MTR_4g065030 95.556 630 19 3 1 630 1 621 0.0 1214
MS.gene055605.t1 MTR_4g134500 31.660 518 279 13 147 629 37 514 3.67e-61 213
MS.gene055605.t1 MTR_3g073790 40.602 133 66 4 358 484 297 422 2.88e-16 82.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene055605.t1 AT3G12080 77.009 535 121 1 97 629 108 642 0.0 847
MS.gene055605.t1 AT3G12080 76.827 479 109 1 97 573 108 586 0.0 750
MS.gene055605.t1 AT5G39960 31.898 511 279 13 142 619 112 586 4.27e-59 209
MS.gene055605.t1 AT1G78010 33.533 167 97 5 358 524 320 472 4.51e-17 85.1

Find 154 sgRNAs with CRISPR-Local

Find 475 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAAACTTACCGGCGCTTTA+TGG 0.166917 4.3:-38972270 MS.gene055605:CDS
GAAAATGGAGGTTGGGGTTT+TGG 0.186784 4.3:+38978857 None:intergenic
CGAGGGAGTGAAATGAATTT+TGG 0.202176 4.3:+38978780 None:intergenic
CTTCTTGACCTTGTTTGTTC+GGG 0.230960 4.3:-38975601 MS.gene055605:CDS
TTATGCAGGTGTCTGAATTT+TGG 0.252199 4.3:-38976897 MS.gene055605:CDS
AGTCACCGGCGCTCAACTTC+GGG 0.258659 4.3:+38978733 None:intergenic
ATTCCAATATCAGCTATATC+AGG 0.278422 4.3:-38975640 MS.gene055605:CDS
GTTTATATGGCCGATCATAT+TGG 0.285141 4.3:-38977628 MS.gene055605:CDS
TTTATATGGCCGATCATATT+GGG 0.292903 4.3:-38977627 MS.gene055605:CDS
CGTTCAAATGCGGGATTTCC+TGG 0.294529 4.3:-38972236 MS.gene055605:CDS
GCTATTGATACTGAATTTAC+TGG 0.295189 4.3:-38975171 MS.gene055605:CDS
TCTTCTTGACCTTGTTTGTT+CGG 0.316702 4.3:-38975602 MS.gene055605:CDS
GTTACGAGGGACCGTTTATA+TGG 0.321880 4.3:-38977641 MS.gene055605:CDS
CCTCTTGGGTTTACTCCTCT+TGG 0.327553 4.3:+38978424 None:intergenic
ATAAAGCGCCGGTAAGTTTC+AGG 0.332302 4.3:+38972272 None:intergenic
AAAATCACAAACTACTGTTA+TGG 0.340708 4.3:-38977555 MS.gene055605:CDS
GATATAGCTGATATTGGAAT+TGG 0.341403 4.3:+38975643 None:intergenic
TGGAGCGGGAGAAGCTATTA+AGG 0.344382 4.3:+38978757 None:intergenic
GTCCCTGATATAGCTGATAT+TGG 0.355168 4.3:+38975637 None:intergenic
AGAAGCTTCGCTTACTTGAT+TGG 0.355390 4.3:-38973900 MS.gene055605:CDS
CATTATTTAATCGTCTCGTT+GGG 0.374320 4.3:-38977838 MS.gene055605:CDS
GTTCCAGCAATTTCAATTGT+TGG 0.384187 4.3:-38975285 MS.gene055605:CDS
CTACCAACAATTGAAATTGC+TGG 0.387235 4.3:+38975282 None:intergenic
TGCTCTTGTCATTGAGGCCA+TGG 0.390813 4.3:-38974222 MS.gene055605:CDS
CCACCTCGTGTCCTGGGAGG+AGG 0.391395 4.3:+38972514 None:intergenic
AAGTCACCGGCGCTCAACTT+CGG 0.391437 4.3:+38978732 None:intergenic
CTGCGCCACAAAAGCCGAAT+GGG 0.392579 4.3:+38972209 None:intergenic
TTCCATCTTATTGATACTGC+TGG 0.393997 4.3:-38974341 MS.gene055605:CDS
GCTATATCAGGGACTGGAAC+TGG 0.396661 4.3:-38975628 MS.gene055605:CDS
GAAGCTTCGCTTACTTGATT+GGG 0.397877 4.3:-38973899 MS.gene055605:CDS
AACTACTGTTATGGAAGATC+TGG 0.412261 4.3:-38977546 MS.gene055605:CDS
CGGTGACTTACCAGAGGAAT+TGG 0.414468 4.3:-38978718 MS.gene055605:CDS
TCTTCTTGCAGGCTGCTATA+AGG 0.414886 4.3:-38972337 MS.gene055605:intron
AAGAAACAAACCTGGCCATC+TGG 0.421017 4.3:+38975147 None:intergenic
GCATTATTTAATCGTCTCGT+TGG 0.421033 4.3:-38977839 MS.gene055605:CDS
ATCCTTGGGAGAAGATTGTC+AGG 0.421979 4.3:+38977896 None:intergenic
CTCCCAAGGATTGCTATTGT+TGG 0.425375 4.3:-38977884 MS.gene055605:CDS
TTATTGATACTGCTGGAATC+AGG 0.432717 4.3:-38974334 MS.gene055605:CDS
GGAATGAGAAAATGGAGGTT+GGG 0.433084 4.3:+38978850 None:intergenic
AAAAGTCATGTCAAGGAAAC+GGG 0.444676 4.3:-38978455 MS.gene055605:CDS
GCTCAACTTCGGGGTGGAGC+GGG 0.447333 4.3:+38978743 None:intergenic
CTAGAGAGGCAGCTGTTGCC+AGG 0.449493 4.3:-38977481 MS.gene055605:CDS
CGAAGAATTGAAGTCGAAAA+CGG 0.451851 4.3:+38978816 None:intergenic
GTTTATTCTACTGCTCTAGC+TGG 0.453196 4.3:-38973868 MS.gene055605:CDS
CTCAATCATTGACGGCATCC+TGG 0.454478 4.3:+38977463 None:intergenic
GGGGTGGTGTAGTAAGAGAT+GGG 0.457201 4.3:+38978879 None:intergenic
GGGTGGTGTAGTAAGAGATG+GGG 0.461187 4.3:+38978880 None:intergenic
CATGGCTTGTATCACTGAAC+AGG 0.463425 4.3:-38974204 MS.gene055605:intron
TCAACCAGGAAAATGATAAC+AGG 0.466627 4.3:+38977410 None:intergenic
AGAAGCAAAGGAAGTTGCGC+TGG 0.467989 4.3:-38978616 MS.gene055605:CDS
CGCTCAACTTCGGGGTGGAG+CGG 0.468260 4.3:+38978742 None:intergenic
GGTGGTGTAGTAAGAGATGG+GGG 0.470366 4.3:+38978881 None:intergenic
GAAAAGTCATGTCAAGGAAA+CGG 0.471972 4.3:-38978456 MS.gene055605:CDS
CTTCCAACAATAGCAATCCT+TGG 0.473216 4.3:+38977881 None:intergenic
GGTGTTGTGGAATGAGAAAA+TGG 0.474235 4.3:+38978842 None:intergenic
AGGACAACTGTAGCCTCAGC+TGG 0.475841 4.3:-38974308 MS.gene055605:CDS
ATCGTGCATTTCGTGCTATT+AGG 0.481079 4.3:-38974259 MS.gene055605:CDS
TGTTGTTGCTCTTGTCATTG+AGG 0.482868 4.3:-38974228 MS.gene055605:CDS
TGGAATGAGAAAATGGAGGT+TGG 0.486033 4.3:+38978849 None:intergenic
GCAATTGTGGTGGATGAGCC+TGG 0.491923 4.3:-38977665 MS.gene055605:CDS
TTGGGGAGATCATGAATTCA+TGG 0.494938 4.3:-38977609 MS.gene055605:CDS
AATATGATCGGCCATATAAA+CGG 0.499928 4.3:+38977630 None:intergenic
AATGCTGACTTGCCAACGTT+CGG 0.500836 4.3:+38977857 None:intergenic
AGAGCAGTAGAATAAACTAC+TGG 0.504818 4.3:+38973874 None:intergenic
GCTTGTCTCTCAATCATTGA+CGG 0.508653 4.3:+38977455 None:intergenic
AAGCAGCTGCGTTCAAATGC+GGG 0.509783 4.3:-38972245 MS.gene055605:CDS
TTCCAGCAGTATCAATAAGA+TGG 0.510717 4.3:+38974339 None:intergenic
AACATCAACATCGTCGTCAT+CGG 0.512150 4.3:+38978653 None:intergenic
TCACGTGTAGTGCCACTGAT+GGG 0.516984 4.3:+38975195 None:intergenic
TTGACAAAGAACACAAATGT+AGG 0.519280 4.3:+38972311 None:intergenic
AGCTGCCTCTCTAGAGGCAA+GGG 0.519693 4.3:+38977490 None:intergenic
TTCCAACAATAGCAATCCTT+GGG 0.521853 4.3:+38977882 None:intergenic
CTGATGTGGAGATTGCTGAT+TGG 0.522257 4.3:-38976990 MS.gene055605:CDS
GGTAATTCAACCAATTCCTC+TGG 0.524585 4.3:+38978708 None:intergenic
ATACTGCTGGAATCAGGAAA+AGG 0.527410 4.3:-38974328 MS.gene055605:CDS
TATTAGTACAACCATCGGTA+TGG 0.528394 4.3:-38977522 MS.gene055605:CDS
TGCCGCTAGTGAAGTCGAAA+AGG 0.533764 4.3:-38972602 MS.gene055605:CDS
AGATCATGAATTCATGGTGG+TGG 0.535411 4.3:-38977603 MS.gene055605:CDS
GAATGAGAAAATGGAGGTTG+GGG 0.538855 4.3:+38978851 None:intergenic
AAACGGTCCCTCGTAACTCC+AGG 0.539185 4.3:+38977647 None:intergenic
TCTTCTTCAACAAGATTCTG+TGG 0.540464 4.3:+38975315 None:intergenic
TCCACGGAAAAGAATTATGC+AGG 0.541274 4.3:-38976911 MS.gene055605:CDS
TTTATTCTACTGCTCTAGCT+GGG 0.544938 4.3:-38973867 MS.gene055605:CDS
GAATTCATGGTGGTGGACAC+TGG 0.545232 4.3:-38977596 MS.gene055605:CDS
ATCACGTGTAGTGCCACTGA+TGG 0.547783 4.3:+38975194 None:intergenic
TATATTGAATCAAGTAGTGC+GGG 0.547969 4.3:-38972554 MS.gene055605:CDS
CAGCTGCCTCTCTAGAGGCA+AGG 0.553340 4.3:+38977489 None:intergenic
CTCTGTTGTACTTCCAGCTG+AGG 0.557066 4.3:+38974295 None:intergenic
ATATCAGCTATATCAGGGAC+TGG 0.557388 4.3:-38975634 MS.gene055605:CDS
ATTGTTGGTAGACCAAATGT+TGG 0.558878 4.3:-38975270 MS.gene055605:CDS
ATTTACTGGACCAGATGGCC+AGG 0.560626 4.3:-38975157 MS.gene055605:intron
TTCCTTTCTATAGGGAAACA+AGG 0.561241 4.3:-38977687 MS.gene055605:intron
GAGACAAGCGATTGCAGCTG+TGG 0.563565 4.3:-38977441 MS.gene055605:CDS
TTCTTGACCTTGTTTGTTCG+GGG 0.568021 4.3:-38975600 MS.gene055605:CDS
AAGGAGAGATCAAGAAGACT+TGG 0.568230 4.3:-38972583 MS.gene055605:CDS
GTCACCGGCGCTCAACTTCG+GGG 0.571389 4.3:+38978734 None:intergenic
ATAGGGAAACAAGGCAATTG+TGG 0.571734 4.3:-38977678 MS.gene055605:intron
TCGAAAACGGAAGGGTGTTG+TGG 0.572801 4.3:+38978829 None:intergenic
GCTGCGCCACAAAAGCCGAA+TGG 0.572990 4.3:+38972208 None:intergenic
CAATTACCTGACCATCAACC+AGG 0.573204 4.3:+38977396 None:intergenic
AGGTCTAACAGCAGCTGATG+TGG 0.573463 4.3:-38977004 MS.gene055605:CDS
GGGAGAAGCTATTAAGGCGA+GGG 0.578363 4.3:+38978763 None:intergenic
TGCGCTCGAGCGAGAAGCAA+AGG 0.578688 4.3:-38978628 MS.gene055605:CDS
CAATTCCTCTGGTAAGTCAC+CGG 0.588112 4.3:+38978719 None:intergenic
CATGATCTCCCCAATATGAT+CGG 0.588215 4.3:+38977618 None:intergenic
TTCCAATATCAGCTATATCA+GGG 0.592136 4.3:-38975639 MS.gene055605:CDS
GCTGCTTCTCCATAAAGCGC+CGG 0.593937 4.3:+38972261 None:intergenic
TTCGGGGTTACAGAAAGTTG+AGG 0.594089 4.3:-38975584 MS.gene055605:intron
ACTGAATTTACTGGACCAGA+TGG 0.596187 4.3:-38975162 MS.gene055605:CDS
TCCACCCCGAAGTTGAGCGC+CGG 0.597785 4.3:-38978738 MS.gene055605:CDS
GAATTGAAGTCGAAAACGGA+AGG 0.597838 4.3:+38978820 None:intergenic
AGATGAGAAAAGTCATGTCA+AGG 0.598043 4.3:-38978462 MS.gene055605:CDS
AGTACAACCATCGGTATGGA+TGG 0.602800 4.3:-38977518 MS.gene055605:CDS
TGCGCCACAAAAGCCGAATG+GGG 0.608074 4.3:+38972210 None:intergenic
TTTGAATGCACTGGTTGGTG+AGG 0.611008 4.3:-38975235 MS.gene055605:CDS
CGGGAGAAGCTATTAAGGCG+AGG 0.611229 4.3:+38978762 None:intergenic
GGCAACAGCTGCCTCTCTAG+AGG 0.612746 4.3:+38977484 None:intergenic
GAAGCAGCTGCGTTCAAATG+CGG 0.613645 4.3:-38972246 MS.gene055605:CDS
TTATATGGCCGATCATATTG+GGG 0.614014 4.3:-38977626 MS.gene055605:CDS
TCCCTGACAATCTTCTCCCA+AGG 0.616707 4.3:-38977898 MS.gene055605:CDS
ATTATTTAATCGTCTCGTTG+GGG 0.616931 4.3:-38977837 MS.gene055605:intron
TCTGTAACCCCGAACAAACA+AGG 0.618188 4.3:+38975593 None:intergenic
TTAACAAGTGCGAATCTCCA+CGG 0.620781 4.3:-38976927 MS.gene055605:CDS
GGGAAACAAGGCAATTGTGG+TGG 0.621300 4.3:-38977675 MS.gene055605:CDS
CTATATTGAATCAAGTAGTG+CGG 0.622529 4.3:-38972555 MS.gene055605:CDS
AAGCCTCCTCCCAGGACACG+AGG 0.622603 4.3:-38972517 MS.gene055605:CDS
GTGTGATCGTTGTAAACAAG+TGG 0.623122 4.3:-38973981 MS.gene055605:CDS
AGGTGGGAGAGATATGTCAT+TGG 0.626554 4.3:+38978915 None:intergenic
CTGGATATTAGTACAACCAT+CGG 0.631405 4.3:-38977527 MS.gene055605:CDS
TTTCCACCTCGTGTCCTGGG+AGG 0.635703 4.3:+38972511 None:intergenic
CTGTTCAGTGATACAAGCCA+TGG 0.639138 4.3:+38974205 None:intergenic
CCTCCTCCCAGGACACGAGG+TGG 0.641204 4.3:-38972514 MS.gene055605:CDS
TATTCCCCTTGCCTCTAGAG+AGG 0.646020 4.3:-38977495 MS.gene055605:CDS
GCGTGTTTACTATTGCACTC+AGG 0.647063 4.3:-38972482 MS.gene055605:intron
AGGACTACAAGATAGCTGAA+AGG 0.648241 4.3:-38974026 MS.gene055605:CDS
GGGAATACCATCCATACCGA+TGG 0.648577 4.3:+38977511 None:intergenic
ACCGGCGCTCAACTTCGGGG+TGG 0.652768 4.3:+38978737 None:intergenic
ACAATAGTCAGCCCCATCAG+TGG 0.654353 4.3:-38975207 MS.gene055605:CDS
GCGCCACAAAAGCCGAATGG+GGG 0.663468 4.3:+38972211 None:intergenic
GGATGAGCCTGGAGTTACGA+GGG 0.666716 4.3:-38977654 MS.gene055605:CDS
TGGATGAGCCTGGAGTTACG+AGG 0.670954 4.3:-38977655 MS.gene055605:CDS
GCTGCCTCTCTAGAGGCAAG+GGG 0.673323 4.3:+38977491 None:intergenic
TGTGATCGTTGTAAACAAGT+GGG 0.679644 4.3:-38973980 MS.gene055605:CDS
TTCATGGTGGTGGACACTGG+TGG 0.685487 4.3:-38977593 MS.gene055605:CDS
CACGTGTAGTGCCACTGATG+GGG 0.686204 4.3:+38975196 None:intergenic
ATTGTTGGAAGACCGAACGT+TGG 0.687597 4.3:-38977869 MS.gene055605:CDS
AATTGAAGTCGAAAACGGAA+GGG 0.697608 4.3:+38978821 None:intergenic
ACAAAGAACACAAATGTAGG+CGG 0.698786 4.3:+38972314 None:intergenic
GAGCGCCGGTGACTTACCAG+AGG 0.703696 4.3:-38978724 MS.gene055605:CDS
CCAAGAGGAGTAAACCCAAG+AGG 0.704933 4.3:-38978424 MS.gene055605:CDS
CTCAGCTGGAAGTACAACAG+AGG 0.713750 4.3:-38974294 MS.gene055605:CDS
TCCTTGGGAGAAGATTGTCA+GGG 0.736124 4.3:+38977897 None:intergenic
GGGAGATCATGAATTCATGG+TGG 0.762942 4.3:-38977606 MS.gene055605:CDS
GTTGTGGAATGAGAAAATGG+AGG 0.768861 4.3:+38978845 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATTCAATATATTGATAA+TGG - chr4.3:38975992-38976011 MS.gene055605:intron 10.0%
!! TCAATTAAATATACAAATTT+AGG + chr4.3:38977467-38977486 None:intergenic 10.0%
!!! ATTTTTTTTATAATCGATTT+TGG - chr4.3:38975053-38975072 MS.gene055605:intron 10.0%
!! AAAAAAAATCTGAATGATTA+TGG + chr4.3:38977008-38977027 None:intergenic 15.0%
!! AACTATTTCATATATCTTAA+AGG - chr4.3:38977032-38977051 MS.gene055605:intron 15.0%
!! AAGAGATTGAAAATAAATTA+GGG - chr4.3:38973121-38973140 MS.gene055605:intron 15.0%
!! AGAAGATAATTCAATATTTA+TGG + chr4.3:38975528-38975547 None:intergenic 15.0%
!! CTAAATTAAAGATTTATGAT+AGG + chr4.3:38977883-38977902 None:intergenic 15.0%
!! TGATTAATTTAATTATGATG+TGG - chr4.3:38974589-38974608 MS.gene055605:intron 15.0%
!!! ATTTAAGATATATCAAGTTT+TGG + chr4.3:38974344-38974363 None:intergenic 15.0%
!!! TTATTATTGTTTTGAACAAA+AGG - chr4.3:38978445-38978464 MS.gene055605:CDS 15.0%
!! AAAATTAATTTCACCAAAAC+AGG + chr4.3:38973313-38973332 None:intergenic 20.0%
!! AATAAGAATCAAGATAAAGT+AGG + chr4.3:38973757-38973776 None:intergenic 20.0%
!! AATACAAATTTGAACATACA+TGG - chr4.3:38977432-38977451 MS.gene055605:CDS 20.0%
!! ATAAGTTACCATAAAAATTG+AGG - chr4.3:38973045-38973064 MS.gene055605:intron 20.0%
!! ATGAATCAACAATTTATCAT+TGG + chr4.3:38975635-38975654 None:intergenic 20.0%
!! GAAGAGATTGAAAATAAATT+AGG - chr4.3:38973120-38973139 MS.gene055605:intron 20.0%
!! TATCAGATTATATACTATGT+TGG - chr4.3:38974527-38974546 MS.gene055605:intron 20.0%
!! TTTGGTTAATATTATGTTTG+AGG - chr4.3:38975071-38975090 MS.gene055605:intron 20.0%
!!! AAGTAATTTTGTAGTAAACT+TGG - chr4.3:38975128-38975147 MS.gene055605:intron 20.0%
!!! TGATAAATTGTTGATTCATT+TGG - chr4.3:38975636-38975655 MS.gene055605:CDS 20.0%
!!! TTCATTTTATGCTATACAAT+AGG - chr4.3:38975738-38975757 MS.gene055605:intron 20.0%
!!! TTGTTTTACAGTATTGATTT+TGG - chr4.3:38975025-38975044 MS.gene055605:intron 20.0%
!!! TTTTAATTCTGGTTACAATA+AGG - chr4.3:38976935-38976954 MS.gene055605:CDS 20.0%
!!! TTTTTTTTGAAGGACTAAAA+TGG - chr4.3:38978067-38978086 MS.gene055605:intron 20.0%
! AAAATCACAAACTACTGTTA+TGG - chr4.3:38973523-38973542 MS.gene055605:intron 25.0%
! AAACCACTCATAATACAAAT+AGG - chr4.3:38976141-38976160 MS.gene055605:intron 25.0%
! AACCACTCATAATACAAATA+GGG - chr4.3:38976142-38976161 MS.gene055605:intron 25.0%
! AACTAGTTACAAACAAAATG+TGG + chr4.3:38973074-38973093 None:intergenic 25.0%
! AAGTGTAAGTAAGAAAATCA+AGG + chr4.3:38975720-38975739 None:intergenic 25.0%
! ACAAATATGTATGCTTAAGA+AGG + chr4.3:38977398-38977417 None:intergenic 25.0%
! ACAATAAAAAATATCAGACC+TGG + chr4.3:38978392-38978411 None:intergenic 25.0%
! AGAAAAATGGAAAAAGATGA+AGG - chr4.3:38978896-38978915 MS.gene055605:CDS 25.0%
! AGTGTAAGTAAGAAAATCAA+GGG + chr4.3:38975719-38975738 None:intergenic 25.0%
! ATAAAGAAACTTCATTTCTC+TGG - chr4.3:38974854-38974873 MS.gene055605:intron 25.0%
! ATCAACAATTTATCATTGGT+AGG + chr4.3:38975631-38975650 None:intergenic 25.0%
! CAAATAGTTGCTAGTTAATT+TGG + chr4.3:38976508-38976527 None:intergenic 25.0%
! CAAATATGTATGCTTAAGAA+GGG + chr4.3:38977397-38977416 None:intergenic 25.0%
! CAAATTAACTAGCAACTATT+TGG - chr4.3:38976506-38976525 MS.gene055605:intron 25.0%
! CATTCAAAGAAAAAAGTTAC+TGG + chr4.3:38975968-38975987 None:intergenic 25.0%
! GAAAATCTTTGATTCATTGA+AGG - chr4.3:38977262-38977281 MS.gene055605:intron 25.0%
! GGTTAATGTTAAACTAAGTT+TGG - chr4.3:38974610-38974629 MS.gene055605:intron 25.0%
! GTGAAAATTTGTATCTTTGT+AGG - chr4.3:38977997-38978016 MS.gene055605:intron 25.0%
! TAATGATAATTATGCTGAAC+AGG - chr4.3:38974050-38974069 MS.gene055605:intron 25.0%
! TAATTATCATTACTGTCTTC+AGG + chr4.3:38974042-38974061 None:intergenic 25.0%
! TACTATCAAATTCATGGATA+CGG - chr4.3:38974379-38974398 MS.gene055605:intron 25.0%
! TAGAGACAAAAATCATTTGA+GGG + chr4.3:38977951-38977970 None:intergenic 25.0%
! TATGATAGGATACTAGATTT+GGG + chr4.3:38977869-38977888 None:intergenic 25.0%
! TCTAAATTTCATGTGCTAAA+TGG - chr4.3:38972825-38972844 MS.gene055605:intron 25.0%
! TTAGAGACAAAAATCATTTG+AGG + chr4.3:38977952-38977971 None:intergenic 25.0%
! TTATGATAGGATACTAGATT+TGG + chr4.3:38977870-38977889 None:intergenic 25.0%
! TTGTTATAAAAGAGAGGATA+GGG + chr4.3:38977777-38977796 None:intergenic 25.0%
! TTTCTCCATTGAATTATTTG+TGG - chr4.3:38973900-38973919 MS.gene055605:CDS 25.0%
!! AAATGTTGACAAGTAAGTTT+TGG - chr4.3:38977236-38977255 MS.gene055605:intron 25.0%
!! AAATTTCCTTTGTCATTTCT+GGG - chr4.3:38978169-38978188 MS.gene055605:intron 25.0%
!! AATTGTTTTCTAGGCAAAAT+TGG + chr4.3:38977371-38977390 None:intergenic 25.0%
!! AGTCTTTAAAGATGTGAATT+TGG - chr4.3:38977975-38977994 MS.gene055605:intron 25.0%
!! ATACTAACAATTTTCCTCTT+GGG + chr4.3:38972671-38972690 None:intergenic 25.0%
!! ATAGTTGTTTCCTTTCTATA+GGG - chr4.3:38973383-38973402 MS.gene055605:intron 25.0%
!! ATTAGTTTAGATGTTGACAA+AGG + chr4.3:38974497-38974516 None:intergenic 25.0%
!! ATTGTTTTCTAGGCAAAATT+GGG + chr4.3:38977370-38977389 None:intergenic 25.0%
!! ATTTTATGCTTTCAATACCA+TGG - chr4.3:38975278-38975297 MS.gene055605:CDS 25.0%
!! CGAATCTGTATTTTATTGAA+TGG - chr4.3:38977598-38977617 MS.gene055605:CDS 25.0%
!! CTAGTTAATTTGGTTAAATG+CGG + chr4.3:38976498-38976517 None:intergenic 25.0%
!! GGTATTGAAAGCATAAAATA+AGG + chr4.3:38975277-38975296 None:intergenic 25.0%
!! GGTTAATTCAACTTACATTT+TGG - chr4.3:38974631-38974650 MS.gene055605:intron 25.0%
!! TATACTAACAATTTTCCTCT+TGG + chr4.3:38972672-38972691 None:intergenic 25.0%
!! TATGGTATAAGGCTTTTAAT+TGG + chr4.3:38976377-38976396 None:intergenic 25.0%
!! TTTGTTATAAAAGAGAGGAT+AGG + chr4.3:38977778-38977797 None:intergenic 25.0%
!!! AATGTAGCTCATTTTTTACT+AGG - chr4.3:38974692-38974711 MS.gene055605:intron 25.0%
!!! AATTTAGTTCTCCAAAGATT+AGG - chr4.3:38977896-38977915 MS.gene055605:CDS 25.0%
!!! ATAAGGCTTTTAATTGGTTA+GGG + chr4.3:38976371-38976390 None:intergenic 25.0%
!!! ATTGGTAAGCTTTTAGAATT+TGG - chr4.3:38976671-38976690 MS.gene055605:intron 25.0%
!!! ATTTAGTTCTCCAAAGATTA+GGG - chr4.3:38977897-38977916 MS.gene055605:CDS 25.0%
!!! CAGTAACTTTTTTCTTTGAA+TGG - chr4.3:38975966-38975985 MS.gene055605:intron 25.0%
!!! CTGGTAACAATTTTTTTTGA+AGG - chr4.3:38978057-38978076 MS.gene055605:intron 25.0%
!!! GAGTTTTTGTTATAAAAGAG+AGG + chr4.3:38977783-38977802 None:intergenic 25.0%
!!! TATAAGGCTTTTAATTGGTT+AGG + chr4.3:38976372-38976391 None:intergenic 25.0%
!!! TTTTGATGGTTATCAATTAC+CGG - chr4.3:38973835-38973854 MS.gene055605:intron 25.0%
!!! TTTTGGGATCTTTTCTATTT+GGG - chr4.3:38978235-38978254 MS.gene055605:intron 25.0%
!!! TTTTTGGGATCTTTTCTATT+TGG - chr4.3:38978234-38978253 MS.gene055605:intron 25.0%
AAAATCAAGTTTGTCCTCAA+TGG + chr4.3:38975217-38975236 None:intergenic 30.0%
AAACTCTAAATTTGATCCTG+TGG + chr4.3:38978107-38978126 None:intergenic 30.0%
AACCCTATTTGTATTATGAG+TGG + chr4.3:38976147-38976166 None:intergenic 30.0%
AACTATTAAGAGGAAACATG+AGG + chr4.3:38974723-38974742 None:intergenic 30.0%
AATATGATCGGCCATATAAA+CGG + chr4.3:38973451-38973470 None:intergenic 30.0%
ACCAATTCACTATTACAATC+TGG + chr4.3:38976657-38976676 None:intergenic 30.0%
ACCAGATTGTAATAGTGAAT+TGG - chr4.3:38976653-38976672 MS.gene055605:intron 30.0%
AGATAAAGTAGGTACATACA+TGG + chr4.3:38973746-38973765 None:intergenic 30.0%
ATTAGAACATATGACACTTG+GGG + chr4.3:38975373-38975392 None:intergenic 30.0%
ATTATTTAATCGTCTCGTTG+GGG - chr4.3:38973241-38973260 MS.gene055605:intron 30.0%
ATTCCAATATCAGCTATATC+AGG - chr4.3:38975438-38975457 MS.gene055605:intron 30.0%
ATTCGTTCCCTTGAATTTAT+GGG + chr4.3:38977583-38977602 None:intergenic 30.0%
CATTATTTAATCGTCTCGTT+GGG - chr4.3:38973240-38973259 MS.gene055605:intron 30.0%
CATTGACAATGAGTAACTTT+AGG - chr4.3:38975556-38975575 MS.gene055605:intron 30.0%
CCTAAATTCTTTCACTTAGT+AGG + chr4.3:38972800-38972819 None:intergenic 30.0%
CCTACTAAGTGAAAGAATTT+AGG - chr4.3:38972797-38972816 MS.gene055605:intron 30.0%
CTATATTGAATCAAGTAGTG+CGG - chr4.3:38978523-38978542 MS.gene055605:intron 30.0%
CTGAAAGGATAGAAAAAGAA+GGG - chr4.3:38977067-38977086 MS.gene055605:intron 30.0%
GATAGAACCCATAAATTCAA+GGG - chr4.3:38977573-38977592 MS.gene055605:CDS 30.0%
GATATAGCTGATATTGGAAT+TGG + chr4.3:38975438-38975457 None:intergenic 30.0%
GATGACATTATAGTCTTTGA+AGG - chr4.3:38978028-38978047 MS.gene055605:intron 30.0%
GATTAAAACAAATTGATCCC+TGG + chr4.3:38975685-38975704 None:intergenic 30.0%
GATTAGAACATATGACACTT+GGG + chr4.3:38975374-38975393 None:intergenic 30.0%
GCTATGGTTAATGATATATC+AGG - chr4.3:38975406-38975425 MS.gene055605:intron 30.0%
GCTATTGATACTGAATTTAC+TGG - chr4.3:38975907-38975926 MS.gene055605:intron 30.0%
GTTAAAATTACGACTTATCC+AGG - chr4.3:38978371-38978390 MS.gene055605:intron 30.0%
GTTGTCTACTATCAAATTCA+TGG - chr4.3:38974373-38974392 MS.gene055605:intron 30.0%
TAAACATCATAAGTAGTCAC+TGG + chr4.3:38976553-38976572 None:intergenic 30.0%
TACTAGTATTTCTTGATGTG+TGG - chr4.3:38978140-38978159 MS.gene055605:intron 30.0%
TATATTGAATCAAGTAGTGC+GGG - chr4.3:38978524-38978543 MS.gene055605:intron 30.0%
TATCTAATCATACAGTCGAA+GGG - chr4.3:38976112-38976131 MS.gene055605:intron 30.0%
TGATAGAACCCATAAATTCA+AGG - chr4.3:38977572-38977591 MS.gene055605:CDS 30.0%
TGATTAGAACATATGACACT+TGG + chr4.3:38975375-38975394 None:intergenic 30.0%
TGCAAAGTCAAAACATTTCT+TGG + chr4.3:38976198-38976217 None:intergenic 30.0%
TGCTTGAGAAATTGTATGTA+GGG - chr4.3:38974743-38974762 MS.gene055605:intron 30.0%
TGGAAATGAACTTAAGAACT+TGG - chr4.3:38978208-38978227 MS.gene055605:intron 30.0%
TGGTACCACAAATAATTCAA+TGG + chr4.3:38973908-38973927 None:intergenic 30.0%
TGGTGAAAATGCAAAAGAAA+TGG - chr4.3:38977647-38977666 MS.gene055605:CDS 30.0%
TGTACTCATTTCCATTCTTT+GGG + chr4.3:38976041-38976060 None:intergenic 30.0%
TGTTATAAAAGAGAGGATAG+GGG + chr4.3:38977776-38977795 None:intergenic 30.0%
TTCCAATATCAGCTATATCA+GGG - chr4.3:38975439-38975458 MS.gene055605:intron 30.0%
TTCTCAAGCAAACTATTAAG+AGG + chr4.3:38974733-38974752 None:intergenic 30.0%
TTGACAAAGAACACAAATGT+AGG + chr4.3:38978770-38978789 None:intergenic 30.0%
TTGCTTGAGAAATTGTATGT+AGG - chr4.3:38974742-38974761 MS.gene055605:intron 30.0%
TTGTACTCATTTCCATTCTT+TGG + chr4.3:38976042-38976061 None:intergenic 30.0%
TTTATATGGCCGATCATATT+GGG - chr4.3:38973451-38973470 MS.gene055605:intron 30.0%
TTTGAGAAAATGACATGTGT+CGG - chr4.3:38972761-38972780 MS.gene055605:intron 30.0%
TTTGCACTTCTAAACTAGAA+TGG - chr4.3:38975185-38975204 MS.gene055605:CDS 30.0%
! AATTTCCTTTGTCATTTCTG+GGG - chr4.3:38978170-38978189 MS.gene055605:intron 30.0%
! ATAATGGAAAAGAGTACATG+TGG - chr4.3:38976008-38976027 MS.gene055605:intron 30.0%
! ATCTGATTTTCTAACTCATC+TGG + chr4.3:38972394-38972413 None:intergenic 30.0%
! CAGAGAATAAAGTATCCTAA+CGG - chr4.3:38977717-38977736 MS.gene055605:intron 30.0%
! CTATAGCTCTATATGGTATA+AGG + chr4.3:38976388-38976407 None:intergenic 30.0%
! GAAATTTCCTTTGTCATTTC+TGG - chr4.3:38978168-38978187 MS.gene055605:intron 30.0%
! GATAGTTGTTTCCTTTCTAT+AGG - chr4.3:38973382-38973401 MS.gene055605:intron 30.0%
!! AACTTTTTCCTGAAACTTAC+CGG - chr4.3:38978798-38978817 MS.gene055605:CDS 30.0%
!! AGCTACATTTTAACGCATAA+AGG + chr4.3:38974681-38974700 None:intergenic 30.0%
!! ATATCAAGTTTTGGTCCTAA+GGG + chr4.3:38974335-38974354 None:intergenic 30.0%
!! GATCTTTTCTATTTGGGTTT+GGG - chr4.3:38978241-38978260 MS.gene055605:intron 30.0%
!! TAAGGCTTTTAATTGGTTAG+GGG + chr4.3:38976370-38976389 None:intergenic 30.0%
!! TATATCAAGTTTTGGTCCTA+AGG + chr4.3:38974336-38974355 None:intergenic 30.0%
!!! CACAGATCTGTTTTTAATTC+TGG - chr4.3:38976924-38976943 MS.gene055605:CDS 30.0%
!!! GCGATTTTTACTTGTTTTGA+TGG - chr4.3:38973821-38973840 MS.gene055605:intron 30.0%
!!! GTTTTTTTTTTCCCTTCTTC+TGG - chr4.3:38978272-38978291 MS.gene055605:intron 30.0%
!!! TTAAGAACTTGGCTGTTTTT+GGG - chr4.3:38978219-38978238 MS.gene055605:intron 30.0%
!!! TTATCGATTTTCTCCTGTTT+TGG - chr4.3:38973297-38973316 MS.gene055605:intron 30.0%
!!! TTTTGAAATTTCGACGTGTT+TGG - chr4.3:38973331-38973350 MS.gene055605:intron 30.0%
AAAACCATCTTTGACATCGA+CGG + chr4.3:38974458-38974477 None:intergenic 35.0%
AAAAGTCATGTCAAGGAAAC+GGG - chr4.3:38972623-38972642 MS.gene055605:intron 35.0%
AACTAATCAGCTACTCACTT+AGG + chr4.3:38978424-38978443 None:intergenic 35.0%
AACTACTGTTATGGAAGATC+TGG - chr4.3:38973532-38973551 MS.gene055605:intron 35.0%
AATCAACAAGTTCGTTGCTA+TGG - chr4.3:38975390-38975409 MS.gene055605:intron 35.0%
AATTGAAGTCGAAAACGGAA+GGG + chr4.3:38972260-38972279 None:intergenic 35.0%
AATTTGATCCTGTGGAAAGT+AGG + chr4.3:38978099-38978118 None:intergenic 35.0%
ACAAAGAACACAAATGTAGG+CGG + chr4.3:38978767-38978786 None:intergenic 35.0%
ACATGATACATCCAGAAGAA+GGG + chr4.3:38978286-38978305 None:intergenic 35.0%
ACCAAGGACACAGAAAATAA+AGG - chr4.3:38976079-38976098 MS.gene055605:intron 35.0%
ACCATATAGAGCTATAGAAC+AGG - chr4.3:38976391-38976410 MS.gene055605:intron 35.0%
ACTAATCAGCTACTCACTTA+GGG + chr4.3:38978423-38978442 None:intergenic 35.0%
AGAATGGAAATGAGTACAAG+TGG - chr4.3:38976043-38976062 MS.gene055605:intron 35.0%
AGAGCAGTAGAATAAACTAC+TGG + chr4.3:38977207-38977226 None:intergenic 35.0%
AGATGAGAAAAGTCATGTCA+AGG - chr4.3:38972616-38972635 MS.gene055605:intron 35.0%
AGCATAAAATAAGGTTGTGC+AGG + chr4.3:38975268-38975287 None:intergenic 35.0%
AGGATAGAAAAAGAAGGGAA+AGG - chr4.3:38977072-38977091 MS.gene055605:intron 35.0%
AGGCATTACTGATGTAAATG+CGG - chr4.3:38976955-38976974 MS.gene055605:CDS 35.0%
ATGGCTCTTGGCTAAAAAAA+TGG + chr4.3:38976173-38976192 None:intergenic 35.0%
ATTTGATCCTGTGGAAAGTA+GGG + chr4.3:38978098-38978117 None:intergenic 35.0%
CATTAGCAATTGCAATGTAG+TGG - chr4.3:38977487-38977506 MS.gene055605:CDS 35.0%
CGAAGAATTGAAGTCGAAAA+CGG + chr4.3:38972265-38972284 None:intergenic 35.0%
CGTTAGGATACTTTATTCTC+TGG + chr4.3:38977719-38977738 None:intergenic 35.0%
CTACCAACAATTGAAATTGC+TGG + chr4.3:38975799-38975818 None:intergenic 35.0%
CTATCTAATCATACAGTCGA+AGG - chr4.3:38976111-38976130 MS.gene055605:intron 35.0%
CTGGATATTAGTACAACCAT+CGG - chr4.3:38973551-38973570 MS.gene055605:intron 35.0%
CTTCGACTGTATGATTAGAT+AGG + chr4.3:38976113-38976132 None:intergenic 35.0%
GAAAAGTCATGTCAAGGAAA+CGG - chr4.3:38972622-38972641 MS.gene055605:intron 35.0%
GATTCGTTCCCTTGAATTTA+TGG + chr4.3:38977584-38977603 None:intergenic 35.0%
GCATTATTTAATCGTCTCGT+TGG - chr4.3:38973239-38973258 MS.gene055605:intron 35.0%
GCTGAAAGGATAGAAAAAGA+AGG - chr4.3:38977066-38977085 MS.gene055605:intron 35.0%
GGATACTTTATTCTCTGGTT+AGG + chr4.3:38977714-38977733 None:intergenic 35.0%
GGTTATGTAATCACATGTGT+TGG - chr4.3:38972926-38972945 MS.gene055605:intron 35.0%
GTCAAAACATTTCTTGGCAA+TGG + chr4.3:38976192-38976211 None:intergenic 35.0%
GTTCCAGCAATTTCAATTGT+TGG - chr4.3:38975793-38975812 MS.gene055605:intron 35.0%
GTTTATATGGCCGATCATAT+TGG - chr4.3:38973450-38973469 MS.gene055605:intron 35.0%
TACATGATACATCCAGAAGA+AGG + chr4.3:38978287-38978306 None:intergenic 35.0%
TATGCTCAGACATAAGATCT+TGG - chr4.3:38974772-38974791 MS.gene055605:intron 35.0%
TATGTTATCTGTGGCAAGAT+TGG + chr4.3:38973928-38973947 None:intergenic 35.0%
TATTAGTACAACCATCGGTA+TGG - chr4.3:38973556-38973575 MS.gene055605:intron 35.0%
TCAACCAGGAAAATGATAAC+AGG + chr4.3:38973671-38973690 None:intergenic 35.0%
TCTTCTTCAACAAGATTCTG+TGG + chr4.3:38975766-38975785 None:intergenic 35.0%
TGGCTCTTGGCTAAAAAAAT+GGG + chr4.3:38976172-38976191 None:intergenic 35.0%
TGTCATAACACCCTAATCTT+TGG + chr4.3:38977910-38977929 None:intergenic 35.0%
TGTGATCGTTGTAAACAAGT+GGG - chr4.3:38977098-38977117 MS.gene055605:intron 35.0%
TTATATGGCCGATCATATTG+GGG - chr4.3:38973452-38973471 MS.gene055605:intron 35.0%
TTATTGATACTGCTGGAATC+AGG - chr4.3:38976744-38976763 MS.gene055605:intron 35.0%
TTCCAACAATAGCAATCCTT+GGG + chr4.3:38973199-38973218 None:intergenic 35.0%
TTCCAGCAGTATCAATAAGA+TGG + chr4.3:38976742-38976761 None:intergenic 35.0%
TTCCATCTTATTGATACTGC+TGG - chr4.3:38976737-38976756 MS.gene055605:intron 35.0%
TTCCTTTCTATAGGGAAACA+AGG - chr4.3:38973391-38973410 MS.gene055605:intron 35.0%
TTTAGATGTTGACAAAGGTG+AGG + chr4.3:38974492-38974511 None:intergenic 35.0%
TTTATTCTACTGCTCTAGCT+GGG - chr4.3:38977211-38977230 MS.gene055605:intron 35.0%
! AAGTAGCATTTTGAATGCAC+TGG - chr4.3:38975834-38975853 MS.gene055605:intron 35.0%
! ATCACCTGTTATCATTTTCC+TGG - chr4.3:38973664-38973683 MS.gene055605:intron 35.0%
! ATGTTTTGTCTCGTATGTTC+AGG + chr4.3:38974936-38974955 None:intergenic 35.0%
! ATTGTCTCTGCAGAATTTTG+TGG - chr4.3:38977540-38977559 MS.gene055605:CDS 35.0%
! ATTGTTGGTAGACCAAATGT+TGG - chr4.3:38975808-38975827 MS.gene055605:intron 35.0%
! CATTACTGTCTTCAGGTTAT+TGG + chr4.3:38974035-38974054 None:intergenic 35.0%
! CTTCTGATGTTTTCTTCACA+TGG - chr4.3:38974308-38974327 MS.gene055605:CDS 35.0%
! GAAGGGAGAAATTGTTTTCT+AGG + chr4.3:38977380-38977399 None:intergenic 35.0%
! GTGGCAATATTTTGTTAGGA+GGG + chr4.3:38977806-38977825 None:intergenic 35.0%
! GTTAGGAGTTCTAGTAACTT+TGG + chr4.3:38977678-38977697 None:intergenic 35.0%
! GTTATCATTTTCCTGGTTGA+TGG - chr4.3:38973671-38973690 MS.gene055605:intron 35.0%
! TAGTCTTTGAAGGACTAATC+TGG - chr4.3:38978038-38978057 MS.gene055605:intron 35.0%
! TCTTCTTGACCTTGTTTGTT+CGG - chr4.3:38975476-38975495 MS.gene055605:intron 35.0%
! TGACGTGGCAATATTTTGTT+AGG + chr4.3:38977810-38977829 None:intergenic 35.0%
! TGGCAATATTTTGTTAGGAG+GGG + chr4.3:38977805-38977824 None:intergenic 35.0%
! TGTATCATGTAACTAGTCTG+TGG - chr4.3:38978296-38978315 MS.gene055605:intron 35.0%
! TGTGGCTACCTCAATTTTTA+TGG + chr4.3:38973056-38973075 None:intergenic 35.0%
! TTATGCAGGTGTCTGAATTT+TGG - chr4.3:38974181-38974200 MS.gene055605:intron 35.0%
! TTTTCATCACCATACAACCA+GGG - chr4.3:38975665-38975684 MS.gene055605:intron 35.0%
! TTTTTCATCACCATACAACC+AGG - chr4.3:38975664-38975683 MS.gene055605:intron 35.0%
!! CTTAAGAACTTGGCTGTTTT+TGG - chr4.3:38978218-38978237 MS.gene055605:intron 35.0%
!! GAGCTTTCGTCTATTTTGAA+TGG - chr4.3:38973153-38973172 MS.gene055605:intron 35.0%
!! GGATCTTTTCTATTTGGGTT+TGG - chr4.3:38978240-38978259 MS.gene055605:intron 35.0%
!!! ATGCTACTTTTGCCAACATT+TGG + chr4.3:38975823-38975842 None:intergenic 35.0%
!!! CTTTTAGAATTTGGTTCAGC+AGG - chr4.3:38976680-38976699 MS.gene055605:intron 35.0%
!!! GCAGTCTGCTGATTTTTATT+TGG + chr4.3:38977132-38977151 None:intergenic 35.0%
!!! GTGTGTTGAGTTGAGAATTT+TGG + chr4.3:38975155-38975174 None:intergenic 35.0%
!!! TAGAATGGTTTTGACCATTG+AGG - chr4.3:38975200-38975219 MS.gene055605:CDS 35.0%
!!! TTATCTCGCGTTTTGACTAT+CGG - chr4.3:38972499-38972518 MS.gene055605:CDS 35.0%
AAAAGCTTCGAAGATTCAGC+CGG + chr4.3:38973873-38973892 None:intergenic 40.0%
AAACGGGTAAAAACTCCAAG+AGG - chr4.3:38972639-38972658 MS.gene055605:intron 40.0%
AAAGTTGTTAACACGCCGTT+AGG + chr4.3:38977735-38977754 None:intergenic 40.0%
AACATCAACATCGTCGTCAT+CGG + chr4.3:38972428-38972447 None:intergenic 40.0%
AAGGAGAGATCAAGAAGACT+TGG - chr4.3:38978495-38978514 MS.gene055605:intron 40.0%
ACAGTATAACCACTCAACCA+TGG + chr4.3:38975298-38975317 None:intergenic 40.0%
ACTCATTGACACGTTGATGT+TGG - chr4.3:38972905-38972924 MS.gene055605:intron 40.0%
ACTCGACACTTTGGTTGATT+TGG + chr4.3:38976247-38976266 None:intergenic 40.0%
ACTGAATTTACTGGACCAGA+TGG - chr4.3:38975916-38975935 MS.gene055605:intron 40.0%
AGAAGCTTCGCTTACTTGAT+TGG - chr4.3:38977178-38977197 MS.gene055605:intron 40.0%
AGATCATGAATTCATGGTGG+TGG - chr4.3:38973475-38973494 MS.gene055605:intron 40.0%
AGCCAGGATATCAGAGTTAA+GGG + chr4.3:38976288-38976307 None:intergenic 40.0%
AGGACTACAAGATAGCTGAA+AGG - chr4.3:38977052-38977071 MS.gene055605:intron 40.0%
AGGTACATACATGGAAGAGA+AGG + chr4.3:38973737-38973756 None:intergenic 40.0%
AGTGTCAAGACCAAGTTCTA+CGG + chr4.3:38974261-38974280 None:intergenic 40.0%
ATACTGCTGGAATCAGGAAA+AGG - chr4.3:38976750-38976769 MS.gene055605:intron 40.0%
ATAGGGAAACAAGGCAATTG+TGG - chr4.3:38973400-38973419 MS.gene055605:intron 40.0%
ATATCAGCTATATCAGGGAC+TGG - chr4.3:38975444-38975463 MS.gene055605:intron 40.0%
ATCCCAATTGATGTGGAGAA+TGG + chr4.3:38977842-38977861 None:intergenic 40.0%
CAAATTGATCCCTGGTTGTA+TGG + chr4.3:38975677-38975696 None:intergenic 40.0%
CAGGTATTTACACCATTCGA+CGG - chr4.3:38978615-38978634 MS.gene055605:CDS 40.0%
CATGATCTCCCCAATATGAT+CGG + chr4.3:38973463-38973482 None:intergenic 40.0%
CATTACTGATGTAAATGCGG+TGG - chr4.3:38976958-38976977 MS.gene055605:CDS 40.0%
CTAATCAGCTACTCACTTAG+GGG + chr4.3:38978422-38978441 None:intergenic 40.0%
CTTCATTTCTCTGGCTGATT+TGG - chr4.3:38974863-38974882 MS.gene055605:intron 40.0%
CTTCCAACAATAGCAATCCT+TGG + chr4.3:38973200-38973219 None:intergenic 40.0%
CTTTCAATACCATGGTTGAG+TGG - chr4.3:38975286-38975305 MS.gene055605:CDS 40.0%
GAAGCTTCGCTTACTTGATT+GGG - chr4.3:38977179-38977198 MS.gene055605:intron 40.0%
GAATGAGAAAATGGAGGTTG+GGG + chr4.3:38972230-38972249 None:intergenic 40.0%
GAATTGAAGTCGAAAACGGA+AGG + chr4.3:38972261-38972280 None:intergenic 40.0%
GATAATTATGCTGAACAGGC+AGG - chr4.3:38974054-38974073 MS.gene055605:intron 40.0%
GCTTGTCTCTCAATCATTGA+CGG + chr4.3:38973626-38973645 None:intergenic 40.0%
GGAATGAGAAAATGGAGGTT+GGG + chr4.3:38972231-38972250 None:intergenic 40.0%
GGTAATTCAACCAATTCCTC+TGG + chr4.3:38972373-38972392 None:intergenic 40.0%
GGTTAAATGCGGTGTCTTTA+AGG + chr4.3:38976487-38976506 None:intergenic 40.0%
GTCACCAAAAGAAACAAACC+TGG + chr4.3:38975942-38975961 None:intergenic 40.0%
GTCCCTGATATAGCTGATAT+TGG + chr4.3:38975444-38975463 None:intergenic 40.0%
GTGCACAACTATGTTATCTG+TGG + chr4.3:38973937-38973956 None:intergenic 40.0%
GTGTGATCGTTGTAAACAAG+TGG - chr4.3:38977097-38977116 MS.gene055605:intron 40.0%
GTTGTGGAATGAGAAAATGG+AGG + chr4.3:38972236-38972255 None:intergenic 40.0%
GTTTATTCTACTGCTCTAGC+TGG - chr4.3:38977210-38977229 MS.gene055605:intron 40.0%
TAAACCACCAACGTTTGGAT+GGG + chr4.3:38976612-38976631 None:intergenic 40.0%
TCCACGGAAAAGAATTATGC+AGG - chr4.3:38974167-38974186 MS.gene055605:intron 40.0%
TCCCAATTGATGTGGAGAAT+GGG + chr4.3:38977841-38977860 None:intergenic 40.0%
TGACAAAACACCGTAGAACT+TGG - chr4.3:38974248-38974267 MS.gene055605:CDS 40.0%
TGATGGTTATCAATTACCGG+TGG - chr4.3:38973838-38973857 MS.gene055605:intron 40.0%
TGGAATGAGAAAATGGAGGT+TGG + chr4.3:38972232-38972251 None:intergenic 40.0%
TGTTGTTGCTCTTGTCATTG+AGG - chr4.3:38976850-38976869 MS.gene055605:intron 40.0%
TTAACAAGTGCGAATCTCCA+CGG - chr4.3:38974151-38974170 MS.gene055605:intron 40.0%
TTGATCCCCAGAAATGACAA+AGG + chr4.3:38978178-38978197 None:intergenic 40.0%
TTGGGGAGATCATGAATTCA+TGG - chr4.3:38973469-38973488 MS.gene055605:intron 40.0%
! AAAATGGAGGTTGGGGTTTT+GGG + chr4.3:38972223-38972242 None:intergenic 40.0%
! ACAACTATGAAGCACTCACA+CGG - chr4.3:38972732-38972751 MS.gene055605:intron 40.0%
! ACCTGCATAATTCTTTTCCG+TGG + chr4.3:38974171-38974190 None:intergenic 40.0%
! ATCGTGCATTTCGTGCTATT+AGG - chr4.3:38976819-38976838 MS.gene055605:intron 40.0%
! CGAGGGAGTGAAATGAATTT+TGG + chr4.3:38972301-38972320 None:intergenic 40.0%
! CGTGGCAATATTTTGTTAGG+AGG + chr4.3:38977807-38977826 None:intergenic 40.0%
! CTTCTTGACCTTGTTTGTTC+GGG - chr4.3:38975477-38975496 MS.gene055605:intron 40.0%
! GCCTGTTCTATAGCTCTATA+TGG + chr4.3:38976395-38976414 None:intergenic 40.0%
! GGTGTTGTGGAATGAGAAAA+TGG + chr4.3:38972239-38972258 None:intergenic 40.0%
! GTAACTAGTCTGTGGTTGAT+AGG - chr4.3:38978304-38978323 MS.gene055605:intron 40.0%
! GTAATCACATGTGTTGGTGT+TGG - chr4.3:38972932-38972951 MS.gene055605:intron 40.0%
! GTAGTCACTGGATTTTTCTG+TGG + chr4.3:38976541-38976560 None:intergenic 40.0%
! TAAATGCGGTGTCTTTAAGG+TGG + chr4.3:38976484-38976503 None:intergenic 40.0%
! TTCTTGACCTTGTTTGTTCG+GGG - chr4.3:38975478-38975497 MS.gene055605:intron 40.0%
! TTTTCTTCACATGGTCCCTT+AGG - chr4.3:38974317-38974336 MS.gene055605:CDS 40.0%
!! AAATGCGGTGTCTTTAAGGT+GGG + chr4.3:38976483-38976502 None:intergenic 40.0%
!! AGCATTTTGAATGCACTGGT+TGG - chr4.3:38975838-38975857 MS.gene055605:intron 40.0%
!! ATCCAAACGTTGGTGGTTTA+CGG - chr4.3:38976612-38976631 MS.gene055605:intron 40.0%
!! ATGGCCAGGTTTGTTTCTTT+TGG - chr4.3:38975935-38975954 MS.gene055605:intron 40.0%
!! CTTTTGACGAGAAGAAGTGT+GGG - chr4.3:38972991-38973010 MS.gene055605:intron 40.0%
!! GACACTTTGGTTGATTTGGA+AGG + chr4.3:38976243-38976262 None:intergenic 40.0%
!! GTTGACAAGTAAGTTTTGGC+TGG - chr4.3:38977240-38977259 MS.gene055605:intron 40.0%
!! GTTTTTCAATGTGCCTCAAC+TGG - chr4.3:38974401-38974420 MS.gene055605:intron 40.0%
!! TAATTGGTTAGGGGCATCAA+TGG + chr4.3:38976361-38976380 None:intergenic 40.0%
!! TGCCTTGTTTCCCTATAGAA+AGG + chr4.3:38973396-38973415 None:intergenic 40.0%
!! TGGCACTGATTCATAAACCA+AGG - chr4.3:38976063-38976082 MS.gene055605:intron 40.0%
!!! CTGTGGTTGATAGGTTTTCT+TGG - chr4.3:38978313-38978332 MS.gene055605:intron 40.0%
!!! GCCTTTATTTTCTGTGTCCT+TGG + chr4.3:38976083-38976102 None:intergenic 40.0%
!!! TTGTTGTTTTCATCTCAGCC+AGG + chr4.3:38976304-38976323 None:intergenic 40.0%
AAACCACCAACGTTTGGATG+GGG + chr4.3:38976611-38976630 None:intergenic 45.0%
AAGAAACAAACCTGGCCATC+TGG + chr4.3:38975934-38975953 None:intergenic 45.0%
ACGTGTCAGATATCAGACAC+TGG - chr4.3:38972963-38972982 MS.gene055605:intron 45.0%
AGAGCGTAAAGCTCAACTGA+AGG + chr4.3:38978660-38978679 None:intergenic 45.0%
AGCTCAACTGAAGGAACTCA+TGG + chr4.3:38978651-38978670 None:intergenic 45.0%
AGTACAACCATCGGTATGGA+TGG - chr4.3:38973560-38973579 MS.gene055605:intron 45.0%
ATCCTTGGGAGAAGATTGTC+AGG + chr4.3:38973185-38973204 None:intergenic 45.0%
ATTGTTGGAAGACCGAACGT+TGG - chr4.3:38973209-38973228 MS.gene055605:intron 45.0%
CAAACAATTCACGCCAGTTG+AGG + chr4.3:38974417-38974436 None:intergenic 45.0%
CAATTACCTGACCATCAACC+AGG + chr4.3:38973685-38973704 None:intergenic 45.0%
CAATTCCTCTGGTAAGTCAC+CGG + chr4.3:38972362-38972381 None:intergenic 45.0%
CACTGATAAAGCTTACCCGA+GGG + chr4.3:38974208-38974227 None:intergenic 45.0%
CAGCCAGGATATCAGAGTTA+AGG + chr4.3:38976289-38976308 None:intergenic 45.0%
CATTTCTTGGCAATGGCTCT+TGG + chr4.3:38976185-38976204 None:intergenic 45.0%
CCAGGATATCAGAGTTAAGG+GGG + chr4.3:38976286-38976305 None:intergenic 45.0%
CCCAATTGATGTGGAGAATG+GGG + chr4.3:38977840-38977859 None:intergenic 45.0%
CCCCATTCTCCACATCAATT+GGG - chr4.3:38977837-38977856 MS.gene055605:intron 45.0%
CTGATGTGGAGATTGCTGAT+TGG - chr4.3:38974088-38974107 MS.gene055605:intron 45.0%
CTGCAAGAAGACATCTGGTA+AGG + chr4.3:38978732-38978751 None:intergenic 45.0%
CTGTTCAGTGATACAAGCCA+TGG + chr4.3:38976876-38976895 None:intergenic 45.0%
CTTACCAGATGTCTTCTTGC+AGG - chr4.3:38978730-38978749 MS.gene055605:CDS 45.0%
GCCAGGATATCAGAGTTAAG+GGG + chr4.3:38976287-38976306 None:intergenic 45.0%
GCGTGTTTACTATTGCACTC+AGG - chr4.3:38978596-38978615 MS.gene055605:CDS 45.0%
GCTCAACTGAAGGAACTCAT+GGG + chr4.3:38978650-38978669 None:intergenic 45.0%
GGCGTGAATTGTTTGCGTAT+CGG - chr4.3:38974422-38974441 MS.gene055605:intron 45.0%
GGGAGATCATGAATTCATGG+TGG - chr4.3:38973472-38973491 MS.gene055605:intron 45.0%
GTAAACCACCAACGTTTGGA+TGG + chr4.3:38976613-38976632 None:intergenic 45.0%
GTTACGAGGGACCGTTTATA+TGG - chr4.3:38973437-38973456 MS.gene055605:intron 45.0%
TATCAGTGGAGGATACATGC+TGG - chr4.3:38974220-38974239 MS.gene055605:CDS 45.0%
TCCCCATTCTCCACATCAAT+TGG - chr4.3:38977836-38977855 MS.gene055605:intron 45.0%
TCCTTGGGAGAAGATTGTCA+GGG + chr4.3:38973184-38973203 None:intergenic 45.0%
TCTGTAACCCCGAACAAACA+AGG + chr4.3:38975488-38975507 None:intergenic 45.0%
TCTTCTTGCAGGCTGCTATA+AGG - chr4.3:38978741-38978760 MS.gene055605:CDS 45.0%
TGAAACTTACCGGCGCTTTA+TGG - chr4.3:38978808-38978827 MS.gene055605:CDS 45.0%
TGAGCTCAAGAGCTCTACAT+TGG - chr4.3:38977627-38977646 MS.gene055605:CDS 45.0%
TGATTTCGCACTCGACACTT+TGG + chr4.3:38976256-38976275 None:intergenic 45.0%
TTCGGGGTTACAGAAAGTTG+AGG - chr4.3:38975494-38975513 MS.gene055605:intron 45.0%
TTGACCGTCGATGTCAAAGA+TGG - chr4.3:38974451-38974470 MS.gene055605:intron 45.0%
! AAATGGAGGTTGGGGTTTTG+GGG + chr4.3:38972222-38972241 None:intergenic 45.0%
! CATGGCTTGTATCACTGAAC+AGG - chr4.3:38976874-38976893 MS.gene055605:intron 45.0%
! CGACGTGTTTGGAATCTGAA+TGG - chr4.3:38973342-38973361 MS.gene055605:intron 45.0%
! CGTGTTTGGAATCTGAATGG+TGG - chr4.3:38973345-38973364 MS.gene055605:intron 45.0%
! CTCCCAAGGATTGCTATTGT+TGG - chr4.3:38973194-38973213 MS.gene055605:intron 45.0%
! CTCCTTTTCGACTTCACTAG+CGG + chr4.3:38978481-38978500 None:intergenic 45.0%
! GAAAATGGAGGTTGGGGTTT+TGG + chr4.3:38972224-38972243 None:intergenic 45.0%
! GCTTTTGACGAGAAGAAGTG+TGG - chr4.3:38972990-38973009 MS.gene055605:intron 45.0%
! GGGCTTTATCCCAATTGATG+TGG + chr4.3:38977849-38977868 None:intergenic 45.0%
! GTGGTACTGAACCCAAAGAA+TGG - chr4.3:38976027-38976046 MS.gene055605:intron 45.0%
! TAACTTTTAAGCCTCCTCCC+AGG - chr4.3:38978553-38978572 MS.gene055605:intron 45.0%
! TGTTTTCCCCATCCAAACGT+TGG - chr4.3:38976602-38976621 MS.gene055605:intron 45.0%
!! AATGCGGTGTCTTTAAGGTG+GGG + chr4.3:38976482-38976501 None:intergenic 45.0%
!! AATGCTGACTTGCCAACGTT+CGG + chr4.3:38973224-38973243 None:intergenic 45.0%
!! ATAAAGCGCCGGTAAGTTTC+AGG + chr4.3:38978809-38978828 None:intergenic 45.0%
!! GTGTCTGAATTTTGGTCCCT+CGG - chr4.3:38974189-38974208 MS.gene055605:intron 45.0%
!! TAGGAGCATTAGCTCTGGTT+AGG + chr4.3:38977695-38977714 None:intergenic 45.0%
!! TGTCTGAATTTTGGTCCCTC+GGG - chr4.3:38974190-38974209 MS.gene055605:intron 45.0%
!! TTTGAATGCACTGGTTGGTG+AGG - chr4.3:38975843-38975862 MS.gene055605:intron 45.0%
!!! CATTTTCCTGGTTGATGGTC+AGG - chr4.3:38973676-38973695 MS.gene055605:intron 45.0%
!! AATATAATGAATATATAAAA+AGG - chr4.3:38973779-38973798 MS.gene055605:intron 5.0%
!! TTATATAATATATAATTACT+TGG - chr4.3:38978686-38978705 MS.gene055605:CDS 5.0%
AAGCAGCTGCGTTCAAATGC+GGG - chr4.3:38978833-38978852 MS.gene055605:CDS 50.0%
ACAATAGTCAGCCCCATCAG+TGG - chr4.3:38975871-38975890 MS.gene055605:intron 50.0%
AGAAGCAAAGGAAGTTGCGC+TGG - chr4.3:38972462-38972481 MS.gene055605:intron 50.0%
AGCAGCACAAAAAGATCCCC+AGG - chr4.3:38976330-38976349 MS.gene055605:intron 50.0%
AGCCGTAAACCACCAACGTT+TGG + chr4.3:38976617-38976636 None:intergenic 50.0%
AGGACACGAGGTGGAAAAAG+AGG - chr4.3:38978573-38978592 MS.gene055605:intron 50.0%
AGGTCTAACAGCAGCTGATG+TGG - chr4.3:38974074-38974093 MS.gene055605:intron 50.0%
ATTTACTGGACCAGATGGCC+AGG - chr4.3:38975921-38975940 MS.gene055605:intron 50.0%
CCAAGAGGAGTAAACCCAAG+AGG - chr4.3:38972654-38972673 MS.gene055605:intron 50.0%
CCACTGATAAAGCTTACCCG+AGG + chr4.3:38974209-38974228 None:intergenic 50.0%
CCCCCTTAACTCTGATATCC+TGG - chr4.3:38976283-38976302 MS.gene055605:intron 50.0%
CCTCTTGGGTTTACTCCTCT+TGG + chr4.3:38972657-38972676 None:intergenic 50.0%
CGGTGACTTACCAGAGGAAT+TGG - chr4.3:38972360-38972379 MS.gene055605:intron 50.0%
CGTTCAAATGCGGGATTTCC+TGG - chr4.3:38978842-38978861 MS.gene055605:CDS 50.0%
CTCAATCATTGACGGCATCC+TGG + chr4.3:38973618-38973637 None:intergenic 50.0%
CTCTGTTGTACTTCCAGCTG+AGG + chr4.3:38976786-38976805 None:intergenic 50.0%
GAAGCAGCTGCGTTCAAATG+CGG - chr4.3:38978832-38978851 MS.gene055605:CDS 50.0%
GAATGGGGATAGTAGTGACG+TGG + chr4.3:38977825-38977844 None:intergenic 50.0%
GATTTCCTGGTACCCCCATT+CGG - chr4.3:38978855-38978874 MS.gene055605:CDS 50.0%
GCTATATCAGGGACTGGAAC+TGG - chr4.3:38975450-38975469 MS.gene055605:intron 50.0%
GGACACGAGGTGGAAAAAGA+GGG - chr4.3:38978574-38978593 MS.gene055605:intron 50.0%
GGCATCAATGGTTATGCCTG+GGG + chr4.3:38976349-38976368 None:intergenic 50.0%
GGGAAACAAGGCAATTGTGG+TGG - chr4.3:38973403-38973422 MS.gene055605:intron 50.0%
GGGAATACCATCCATACCGA+TGG + chr4.3:38973570-38973589 None:intergenic 50.0%
GGGAGAAGCTATTAAGGCGA+GGG + chr4.3:38972318-38972337 None:intergenic 50.0%
GGGCATCAATGGTTATGCCT+GGG + chr4.3:38976350-38976369 None:intergenic 50.0%
GGGGTGGTGTAGTAAGAGAT+GGG + chr4.3:38972202-38972221 None:intergenic 50.0%
GGGTGGTGTAGTAAGAGATG+GGG + chr4.3:38972201-38972220 None:intergenic 50.0%
GGTGGTGTAGTAAGAGATGG+GGG + chr4.3:38972200-38972219 None:intergenic 50.0%
GTGGCGCAGCAGAAGAAAAA+TGG - chr4.3:38978883-38978902 MS.gene055605:CDS 50.0%
GTGTAGTAAGAGATGGGGGT+GGG + chr4.3:38972196-38972215 None:intergenic 50.0%
TCCCTGACAATCTTCTCCCA+AGG - chr4.3:38973180-38973199 MS.gene055605:intron 50.0%
TGCCGCTAGTGAAGTCGAAA+AGG - chr4.3:38978476-38978495 MS.gene055605:intron 50.0%
TGCTCTTGTCATTGAGGCCA+TGG - chr4.3:38976856-38976875 MS.gene055605:intron 50.0%
TGGAGCGGGAGAAGCTATTA+AGG + chr4.3:38972324-38972343 None:intergenic 50.0%
TGGGGATCAAGTGATGCACA+TGG - chr4.3:38978188-38978207 MS.gene055605:intron 50.0%
TGTAGTAAGAGATGGGGGTG+GGG + chr4.3:38972195-38972214 None:intergenic 50.0%
TTTCCCCATCCAAACGTTGG+TGG - chr4.3:38976605-38976624 MS.gene055605:intron 50.0%
! ATCACGTGTAGTGCCACTGA+TGG + chr4.3:38975887-38975906 None:intergenic 50.0%
! CCTCGGGTAAGCTTTATCAG+TGG - chr4.3:38974206-38974225 MS.gene055605:CDS 50.0%
! CGGGTAAGCTTTATCAGTGG+AGG - chr4.3:38974209-38974228 MS.gene055605:CDS 50.0%
! CTCAGCTGGAAGTACAACAG+AGG - chr4.3:38976784-38976803 MS.gene055605:intron 50.0%
! CTTTTTCCACCTCGTGTCCT+GGG + chr4.3:38978573-38978592 None:intergenic 50.0%
! TATTCCCCTTGCCTCTAGAG+AGG - chr4.3:38973583-38973602 MS.gene055605:intron 50.0%
! TCACGTGTAGTGCCACTGAT+GGG + chr4.3:38975886-38975905 None:intergenic 50.0%
! TCTTTTTCCACCTCGTGTCC+TGG + chr4.3:38978574-38978593 None:intergenic 50.0%
!! AATGGAGGTTGGGGTTTTGG+GGG + chr4.3:38972221-38972240 None:intergenic 50.0%
!! CTGGTTAGGAGCATTAGCTC+TGG + chr4.3:38977700-38977719 None:intergenic 50.0%
!! GAATTCATGGTGGTGGACAC+TGG - chr4.3:38973482-38973501 MS.gene055605:intron 50.0%
!! TCGAAAACGGAAGGGTGTTG+TGG + chr4.3:38972252-38972271 None:intergenic 50.0%
AAACGGTCCCTCGTAACTCC+AGG + chr4.3:38973434-38973453 None:intergenic 55.0%
AAGTCACCGGCGCTCAACTT+CGG + chr4.3:38972349-38972368 None:intergenic 55.0%
AGGACAACTGTAGCCTCAGC+TGG - chr4.3:38976770-38976789 MS.gene055605:intron 55.0%
CAGTGGAGGATACATGCTGG+AGG - chr4.3:38974223-38974242 MS.gene055605:CDS 55.0%
CGGGAGAAGCTATTAAGGCG+AGG + chr4.3:38972319-38972338 None:intergenic 55.0%
CTGCGCCACAAAAGCCGAAT+GGG + chr4.3:38978872-38978891 None:intergenic 55.0%
GAGACAAGCGATTGCAGCTG+TGG - chr4.3:38973637-38973656 MS.gene055605:intron 55.0%
GCAGCCTGCAAGAAGACATC+TGG + chr4.3:38978737-38978756 None:intergenic 55.0%
GCTGCTTCTCCATAAAGCGC+CGG + chr4.3:38978820-38978839 None:intergenic 55.0%
GGATGAGCCTGGAGTTACGA+GGG - chr4.3:38973424-38973443 MS.gene055605:intron 55.0%
GGGGGTGGTGTAGTAAGAGA+TGG + chr4.3:38972203-38972222 None:intergenic 55.0%
GGGTAAGCACTACCGTCGAA+TGG + chr4.3:38978630-38978649 None:intergenic 55.0%
GGTGTAGTAAGAGATGGGGG+TGG + chr4.3:38972197-38972216 None:intergenic 55.0%
TGCGCCACAAAAGCCGAATG+GGG + chr4.3:38978871-38978890 None:intergenic 55.0%
TGGATGAGCCTGGAGTTACG+AGG - chr4.3:38973423-38973442 MS.gene055605:intron 55.0%
! AGCTGCCTCTCTAGAGGCAA+GGG + chr4.3:38973591-38973610 None:intergenic 55.0%
! CACGTGTAGTGCCACTGATG+GGG + chr4.3:38975885-38975904 None:intergenic 55.0%
! GGGGCATCAATGGTTATGCC+TGG + chr4.3:38976351-38976370 None:intergenic 55.0%
! GTACCCCCATTCGGCTTTTG+TGG - chr4.3:38978864-38978883 MS.gene055605:CDS 55.0%
! TTACCGGTGGTTCTGCAGTC+CGG - chr4.3:38973851-38973870 MS.gene055605:intron 55.0%
!! AAAAGCCGAATGGGGGTACC+AGG + chr4.3:38978863-38978882 None:intergenic 55.0%
!! CGGTGTCTTTAAGGTGGGGA+GGG + chr4.3:38976478-38976497 None:intergenic 55.0%
!! GCAATTGTGGTGGATGAGCC+TGG - chr4.3:38973413-38973432 MS.gene055605:intron 55.0%
!! TTCATGGTGGTGGACACTGG+TGG - chr4.3:38973485-38973504 MS.gene055605:intron 55.0%
AGTCACCGGCGCTCAACTTC+GGG + chr4.3:38972348-38972367 None:intergenic 60.0%
CTAGAGAGGCAGCTGTTGCC+AGG - chr4.3:38973597-38973616 MS.gene055605:intron 60.0%
GCGCCACAAAAGCCGAATGG+GGG + chr4.3:38978870-38978889 None:intergenic 60.0%
GCTGCGCCACAAAAGCCGAA+TGG + chr4.3:38978873-38978892 None:intergenic 60.0%
GGCAACAGCTGCCTCTCTAG+AGG + chr4.3:38973597-38973616 None:intergenic 60.0%
GGCGACACCCTACTTTCCAC+AGG - chr4.3:38978088-38978107 MS.gene055605:intron 60.0%
TGCGCTCGAGCGAGAAGCAA+AGG - chr4.3:38972450-38972469 MS.gene055605:intron 60.0%
TTTCCACCTCGTGTCCTGGG+AGG + chr4.3:38978570-38978589 None:intergenic 60.0%
! AGATGGGGGTGGGGAAGTGT+AGG + chr4.3:38972186-38972205 None:intergenic 60.0%
! CAGCTGCCTCTCTAGAGGCA+AGG + chr4.3:38973592-38973611 None:intergenic 60.0%
! GCTGCCTCTCTAGAGGCAAG+GGG + chr4.3:38973590-38973609 None:intergenic 60.0%
!! GCGGTGTCTTTAAGGTGGGG+AGG + chr4.3:38976479-38976498 None:intergenic 60.0%
AAGCCTCCTCCCAGGACACG+AGG - chr4.3:38978561-38978580 MS.gene055605:intron 65.0%
CAGCCGGACTGCAGAACCAC+CGG + chr4.3:38973857-38973876 None:intergenic 65.0%
CGCTCAACTTCGGGGTGGAG+CGG + chr4.3:38972339-38972358 None:intergenic 65.0%
GCTCAACTTCGGGGTGGAGC+GGG + chr4.3:38972338-38972357 None:intergenic 65.0%
GTCACCGGCGCTCAACTTCG+GGG + chr4.3:38972347-38972366 None:intergenic 65.0%
TCCACCCCGAAGTTGAGCGC+CGG - chr4.3:38972340-38972359 MS.gene055605:intron 65.0%
TCCTTCGACTCCCTCACCCC+CGG - chr4.3:38976432-38976451 MS.gene055605:intron 65.0%
! GGGGGTGGGGAAGTGTAGGT+GGG + chr4.3:38972182-38972201 None:intergenic 65.0%
! TGGGGGTGGGGAAGTGTAGG+TGG + chr4.3:38972183-38972202 None:intergenic 65.0%
!! GAGCGCCGGTGACTTACCAG+AGG - chr4.3:38972354-38972373 MS.gene055605:intron 65.0%
!!! GGAGGTTGGGGTTTTGGGGG+TGG + chr4.3:38972218-38972237 None:intergenic 65.0%
ACCGGCGCTCAACTTCGGGG+TGG + chr4.3:38972344-38972363 None:intergenic 70.0%
CCACCTCGTGTCCTGGGAGG+AGG + chr4.3:38978567-38978586 None:intergenic 70.0%
CCTCCTCCCAGGACACGAGG+TGG - chr4.3:38978564-38978583 MS.gene055605:intron 70.0%
CCCTCACCCCCGGCCACCAA+GGG - chr4.3:38976442-38976461 MS.gene055605:intron 75.0%
GCCGGGGGTGAGGGAGTCGA+AGG + chr4.3:38976436-38976455 None:intergenic 75.0%
TCCCTCACCCCCGGCCACCA+AGG - chr4.3:38976441-38976460 MS.gene055605:intron 75.0%
! CCCTTGGTGGCCGGGGGTGA+GGG + chr4.3:38976445-38976464 None:intergenic 75.0%
!! GCCCTTGGTGGCCGGGGGTG+AGG + chr4.3:38976446-38976465 None:intergenic 80.0%


Chromosome Type Strat End Strand Name
chr4.3 gene 38972166 38978934 38972166 ID=MS.gene055605
chr4.3 mRNA 38972166 38978934 38972166 ID=MS.gene055605.t1;Parent=MS.gene055605
chr4.3 exon 38978580 38978934 38978580 ID=MS.gene055605.t1.exon1;Parent=MS.gene055605.t1
chr4.3 CDS 38978580 38978934 38978580 ID=cds.MS.gene055605.t1;Parent=MS.gene055605.t1
chr4.3 exon 38978418 38978485 38978418 ID=MS.gene055605.t1.exon2;Parent=MS.gene055605.t1
chr4.3 CDS 38978418 38978485 38978418 ID=cds.MS.gene055605.t1;Parent=MS.gene055605.t1
chr4.3 exon 38977838 38977921 38977838 ID=MS.gene055605.t1.exon3;Parent=MS.gene055605.t1
chr4.3 CDS 38977838 38977921 38977838 ID=cds.MS.gene055605.t1;Parent=MS.gene055605.t1
chr4.3 exon 38977403 38977696 38977403 ID=MS.gene055605.t1.exon4;Parent=MS.gene055605.t1
chr4.3 CDS 38977403 38977696 38977403 ID=cds.MS.gene055605.t1;Parent=MS.gene055605.t1
chr4.3 exon 38976889 38977028 38976889 ID=MS.gene055605.t1.exon5;Parent=MS.gene055605.t1
chr4.3 CDS 38976889 38977028 38976889 ID=cds.MS.gene055605.t1;Parent=MS.gene055605.t1
chr4.3 exon 38975585 38975672 38975585 ID=MS.gene055605.t1.exon6;Parent=MS.gene055605.t1
chr4.3 CDS 38975585 38975672 38975585 ID=cds.MS.gene055605.t1;Parent=MS.gene055605.t1
chr4.3 exon 38975158 38975340 38975158 ID=MS.gene055605.t1.exon7;Parent=MS.gene055605.t1
chr4.3 CDS 38975158 38975340 38975158 ID=cds.MS.gene055605.t1;Parent=MS.gene055605.t1
chr4.3 exon 38974205 38974366 38974205 ID=MS.gene055605.t1.exon8;Parent=MS.gene055605.t1
chr4.3 CDS 38974205 38974366 38974205 ID=cds.MS.gene055605.t1;Parent=MS.gene055605.t1
chr4.3 exon 38973853 38974046 38973853 ID=MS.gene055605.t1.exon9;Parent=MS.gene055605.t1
chr4.3 CDS 38973853 38974046 38973853 ID=cds.MS.gene055605.t1;Parent=MS.gene055605.t1
chr4.3 exon 38972483 38972633 38972483 ID=MS.gene055605.t1.exon10;Parent=MS.gene055605.t1
chr4.3 CDS 38972483 38972633 38972483 ID=cds.MS.gene055605.t1;Parent=MS.gene055605.t1
chr4.3 exon 38972166 38972348 38972166 ID=MS.gene055605.t1.exon11;Parent=MS.gene055605.t1
chr4.3 CDS 38972166 38972348 38972166 ID=cds.MS.gene055605.t1;Parent=MS.gene055605.t1
Gene Sequence

>MS.gene055605

ATGACATATCTCTCCCACCTACACTTCCCCACCCCCATCTCTTACTACACCACCCCCAAAACCCCAACCTCCATTTTCTCATTCCACAACACCCTTCCGTTTTCGACTTCAATTCTTCGCTCACTTTCTCAACCAAAATTCATTTCACTCCCTCGCCTTAATAGCTTCTCCCGCTCCACCCCGAAGTTGAGCGCCGGTGACTTACCAGAGGAATTGGTTGAATTACCAGATGAGTTAGAAAATCAGATTGATGATTATTCCGATGACGACGATGTTGATGTTGTTGCGCTCGAGCGAGAAGCAAAGGAAGTTGCGCTGGAGTATTCAAGCTCTTTATCTCGCGTTTTGACTATCGGTGAGATTCTTTGCTTCATTCGTAGTTAATTGAGTTTTTATTTATTTTTGCACTCTTCAATAATTATCTTTTTTTCTGTGTTTCATGATTTCAGAAGATGAGAAAAGTCATGTCAAGGAAACGGGTAAAAACTCCAAGAGGAGTAAACCCAAGAGGAAAATTGTTAGTATATTCTTCAACTTATCAAATTCTACTCTCTATTCAATGCTTAACAACTATGAAGCACTCACACGGTAATAATTTGAGAAAATGACATGTGTCGGTGTCGTGTTTGTGCCTACTAAGTGAAAGAATTTAGGATACTTCTAAATTTCATGTGCTAAATGGCAAAACGCGACAATGTGATTAATAGCTACAAATAACAGACACAGACACTAGAAAGACACTCATTGACACGTTGATGTTGGTTATGTAATCACATGTGTTGGTGTTGGATATCGACACGTGTCAGATATCAGACACTGGACACGCTTTTGACGAGAAGAAGTGTGGGTGCTACATAGATTGATATATAGACTGATATCATAAGTTACCATAAAAATTGAGGTAGCCACATTTTGTTTGTAACTAGTTAGAGCTTGAATTATTATTTTATTTTTGAAGAGATTGAAAATAAATTAGGGTTATTTGCTGAGCTTTCGTCTATTTTGAATGGTAGATCCCTGACAATCTTCTCCCAAGGATTGCTATTGTTGGAAGACCGAACGTTGGCAAGTCAGCATTATTTAATCGTCTCGTTGGGGTATTGAATGTTTTTTAATAGCTTTGTTTTTTTCTTATCGATTTTCTCCTGTTTTGGTGAAATTAATTTTTTGAAATTTCGACGTGTTTGGAATCTGAATGGTGGAAGCGATTTCTTACGATAGTTGTTTCCTTTCTATAGGGAAACAAGGCAATTGTGGTGGATGAGCCTGGAGTTACGAGGGACCGTTTATATGGCCGATCATATTGGGGAGATCATGAATTCATGGTGGTGGACACTGGTGGTGTTCTCACTGTTTCAAAATCACAAACTACTGTTATGGAAGATCTGGATATTAGTACAACCATCGGTATGGATGGTATTCCCCTTGCCTCTAGAGAGGCAGCTGTTGCCAGGATGCCGTCAATGATTGAGAGACAAGCGATTGCAGCTGTGGAAGAATCACCTGTTATCATTTTCCTGGTTGATGGTCAGGTAATTGTTTGTTTGCATATAAAATCTTATGTTTTTCCTTCTCTTCCATGTATGTACCTACTTTATCTTGATTCTTATTTTAATATAATGAATATATAAAAAGGATAACAAGATATTTAAAAAGCGATTTTTACTTGTTTTGATGGTTATCAATTACCGGTGGTTCTGCAGTCCGGCTGAATCTTCGAAGCTTTTAGTTGTTTTTCTCCATTGAATTATTTGTGGTACCAATCTTGCCACAGATAACATAGTTGTGCACTATCAAAATGAGATAACAGTTTTTGTTGTTCATACTTGTTAAGTGCATGATATGATAAACTTTTTCTTGAATCTACCAATAACCTGAAGACAGTAATGATAATTATGCTGAACAGGCAGGTCTAACAGCAGCTGATGTGGAGATTGCTGATTGGCTACGTAAAAACTACTCAAATAAAAGTATCATTCTCGCAGTTAACAAGTGCGAATCTCCACGGAAAAGAATTATGCAGGTGTCTGAATTTTGGTCCCTCGGGTAAGCTTTATCAGTGGAGGATACATGCTGGAGGTGTGACAAAACACCGTAGAACTTGGTCTTGACACTTAACTACTTTAAAAAAAAAATGCATGTCTTCTGATGTTTTCTTCACATGGTCCCTTAGGACCAAAACTTGATATATCTTAAATTGTTATTTCGTTGTCTACTATCAAATTCATGGATACGGTTTTTCAATGTGCCTCAACTGGCGTGAATTGTTTGCGTATCGGTTTCAATTGACCGTCGATGTCAAAGATGGTTTTGAACACACTTACCTCACCTTTGTCAACATCTAAACTAATTCTTTAGAGATATCAGATTATATACTATGTTGGCGCGACAGTTAATTCTTTTTAATAACTAGCTAGTTCGAGTGATTAATTTAATTATGATGTGGTTAATGTTAAACTAAGTTTGGTTAATTCAACTTACATTTTGGTAAATTTAAAAAACTATAGAATCACCTTTATGCGTTAAAATGTAGCTCATTTTTTACTAGGTGCATCCTCATGTTTCCTCTTAATAGTTTGCTTGAGAAATTGTATGTAGGGTGTAACTATGCTCAGACATAAGATCTTGGTTATCTTGTTATATATTCATGTGATGTAGATACAAGATATTACAGCTATTACATATTTAATAAAGAAACTTCATTTCTCTGGCTGATTTGGACGTTTTAGAAGTCATATAATTGTTGATGTTTAACATCTTGATACATCCTGAACATACGAGACAAAACATTGTCACACATTGCGTCTGACAATTAAGTGTTATTTGAAGAGCAACTGTTAAACTTCATTTTGAATGATCTTGTTTTACAGTATTGATTTTGGTTAACATTTTTTTTATAATCGATTTTGGTTAATATTATGTTTGAGGTGAAGTGATATATTTTTGAAATGATTTATATTAAAAGTAATTTTGTAGTAAACTTGGTCCAAAATTCTCAACTCAACACACAAGCAAAATTTTTGCACTTCTAAACTAGAATGGTTTTGACCATTGAGGACAAACTTGATTTTGATATAAAACATCAAATGATATTTTTTTCCTGCACAACCTTATTTTATGCTTTCAATACCATGGTTGAGTGGTTATACTGTTACTGCAAACATATAGTGCAAAGCTCTTGCATCATGTTGTCTACTGATGCTTCCCCAAGTGTCATATGTTCTAATCAACAAGTTCGTTGCTATGGTTAATGATATATCAGGTTAGAACCAATTCCAATATCAGCTATATCAGGGACTGGAACTGGAGATCTTCTTGACCTTGTTTGTTCGGGGTTACAGAAAGTTGAGGTTTGTTTTCCATAAATATTGAATTATCTTCTGCATGTATCATTGACAATGAGTAACTTTAGGTGATACTTTATATTGTGTAGCAGATTGATTTGACTATATTATACATTCACCTACCAATGATAAATTGTTGATTCATTTGGAAGCATTTTTCATCACCATACAACCAGGGATCAATTTGTTTTAATCTGATTTTGAAACCCTTGATTTTCTTACTTACACTTCATTTTATGCTATACAATAGGAGCCACAGAATCTTGTTGAAGAAGAAGATTATGTTCCAGCAATTTCAATTGTTGGTAGACCAAATGTTGGCAAAAGTAGCATTTTGAATGCACTGGTTGGTGAGGATAGAACAATAGTCAGCCCCATCAGTGGCACTACACGTGATGCTATTGATACTGAATTTACTGGACCAGATGGCCAGGTTTGTTTCTTTTGGTGACTAACCAGTAACTTTTTTCTTTGAATGGCAAAAAATTCAATATATTGATAATGGAAAAGAGTACATGTGGTACTGAACCCAAAGAATGGAAATGAGTACAAGTGGCACTGATTCATAAACCAAGGACACAGAAAATAAAGGCACAAAAACCTATCTAATCATACAGTCGAAGGGATTAACAAACCACTCATAATACAAATAGGGTTGTCCCATTTTTTTAGCCAAGAGCCATTGCCAAGAAATGTTTTGACTTTGCAGAAAAAATAAACTCATTACGTGCCTTCCAAATCAACCAAAGTGTCGAGTGCGAAATCAGCAATAGCCCCCTTAACTCTGATATCCTGGCTGAGATGAAAACAACAACTCTTTAGCAGCACAAAAAGATCCCCAGGCATAACCATTGATGCCCCTAACCAATTAAAAGCCTTATACCATATAGAGCTATAGAACAGGCATTTTGCAAAGAGATGTTCCTTCGACTCCCTCACCCCCGGCCACCAAGGGCATGGTGGTTCCCTCCCCACCTTAAAGACACCGCATTTAACCAAATTAACTAGCAACTATTTGGTCTCTAGTGCCACAGAAAAATCCAGTGACTACTTATGATGTTTAGATATTTTGCAAGAAAGAAACTTTGATAATGTTTTCCCCATCCAAACGTTGGTGGTTTACGGCTGTATACTTTTGAACTTACCAGATTGTAATAGTGAATTGGTAAGCTTTTAGAATTTGGTTCAGCAGGATAATAATAATTTTTTATTTTCTTTCTCTAGAAGTTCCATCTTATTGATACTGCTGGAATCAGGAAAAGGACAACTGTAGCCTCAGCTGGAAGTACAACAGAGGCTTTGTCAGTGAATCGTGCATTTCGTGCTATTAGGCGTTCTGATGTTGTTGCTCTTGTCATTGAGGCCATGGCTTGTATCACTGAACAGGTTCGCAATAAATGCTATTGTAGATGAACACAGATCTGTTTTTAATTCTGGTTACAATAAGGCATTACTGATGTAAATGCGGTGGCAGTTGTTTAATAATTAATATTGTCCATAATCATTCAGATTTTTTTTACGAAACTATTTCATATATCTTAAAGGACTACAAGATAGCTGAAAGGATAGAAAAAGAAGGGAAAGGTTGTGTGATCGTTGTAAACAAGTGGGATACAATACCAAATAAAAATCAGCAGACTGCTTTATACTATGAGCAAGATGTCAGAGAGAAGCTTCGCTTACTTGATTGGGCTCCAGTAGTTTATTCTACTGCTCTAGCTGGGCAAAATGTTGACAAGTAAGTTTTGGCTGGAAAATCTTTGATTCATTGAAGGTGCACACTGCTTAGTATTTTTTTTTTTTGTTTGTTGAAAAAGTATTGCATAGTATGTTAATTTCATGCTTTCTTTGAAATCTCCCAATTTTGCCTAGAAAACAATTTCTCCCTTCTTAAGCATACATATTTGTAAACAAATACAACAAATACAAATTTGAACATACATGGTGAATGATTCCTAAATTTGTATATTTAATTGACATTAGCAATTGCAATGTAGTGGTAATAGTAGACTTTATGTTCTAGTCAAATCATTGTCTCTGCAGAATTTTGTGGAGAGTAAATTGATAGAACCCATAAATTCAAGGGAACGAATCTGTATTTTATTGAATGGTAAAGATGAGCTCAAGAGCTCTACATTGGTGAAAATGCAAAAGAAATGGATAAACCAAAGTTACTAGAACTCCTAACCAGAGCTAATGCTCCTAACCAGAGAATAAAGTATCCTAACGGCGTGTTAACAACTTTCTAAGTGCTTTACTAACTCCCCTATCCTCTCTTTTATAACAAAAACTCCCCTCCTAACAAAATATTGCCACGTCACTACTATCCCCATTCTCCACATCAATTGGGATAAAGCCCAAATCTAGTATCCTATCATAAATCTTTAATTTAGTTCTCCAAAGATTAGGGTGTTATGACATTTGATATGAGAATGTAGCCCTCAAATGATTTTTGTCTCTAAATTAGTCTTTAAAGATGTGAATTTGGTGAAAATTTGTATCTTTGTAGGACTAATATGATGACATTATAGTCTTTGAAGGACTAATCTGGTAACAATTTTTTTTGAAGGACTAAAATGGCGACACCCTACTTTCCACAGGATCAAATTTAGAGTTTATTCTTTTTTATATACTAGTATTTCTTGATGTGTGGTAAAAGAAATTTCCTTTGTCATTTCTGGGGATCAAGTGATGCACATGGAAATGAACTTAAGAACTTGGCTGTTTTTGGGATCTTTTCTATTTGGGTTTGGGCAAACTGTGTTTTTTTTTTCCCTTCTTCTGGATGTATCATGTAACTAGTCTGTGGTTGATAGGTTTTCTTGGATTTAGACAATAACTTTGTATTATAATTTATAAATGTTAAAATTACGACTTATCCAGGTCTGATATTTTTTATTGTTGCTAATCCCCTAAGTGAGTAGCTGATTAGTTATTATTATTGTTTTGAACAAAAGGATCATTGTTGCCGCTAGTGAAGTCGAAAAGGAGAGATCAAGAAGACTTGGTACTTCTATATTGAATCAAGTAGTGCGGGAAGCAGTAACTTTTAAGCCTCCTCCCAGGACACGAGGTGGAAAAAGAGGGCGTGTTTACTATTGCACTCAGGTATTTACACCATTCGACGGTAGTGCTTACCCATGAGTTCCTTCAGTTGAGCTTTACGCTCTTATAAATTATATAATATATAATTACTTGGTATCTTGTATGTTCTCAGTTCCTTACCAGATGTCTTCTTGCAGGCTGCTATAAGGCCGCCTACATTTGTGTTCTTTGTCAATGATGCAAAACTTTTTCCTGAAACTTACCGGCGCTTTATGGAGAAGCAGCTGCGTTCAAATGCGGGATTTCCTGGTACCCCCATTCGGCTTTTGTGGCGCAGCAGAAGAAAAATGGAAAAAGATGAAGGTCAGTATTTATTTTAA

Protein sequence

>MS.gene055605.t1

MTYLSHLHFPTPISYYTTPKTPTSIFSFHNTLPFSTSILRSLSQPKFISLPRLNSFSRSTPKLSAGDLPEELVELPDELENQIDDYSDDDDVDVVALEREAKEVALEYSSSLSRVLTIEDEKSHVKETGKNSKRSKPKRKIIPDNLLPRIAIVGRPNVGKSALFNRLVGGNKAIVVDEPGVTRDRLYGRSYWGDHEFMVVDTGGVLTVSKSQTTVMEDLDISTTIGMDGIPLASREAAVARMPSMIERQAIAAVEESPVIIFLVDGQAGLTAADVEIADWLRKNYSNKSIILAVNKCESPRKRIMQVSEFWSLGLEPIPISAISGTGTGDLLDLVCSGLQKVEEPQNLVEEEDYVPAISIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPDGQKFHLIDTAGIRKRTTVASAGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQDYKIAERIEKEGKGCVIVVNKWDTIPNKNQQTALYYEQDVREKLRLLDWAPVVYSTALAGQNVDKIIVAASEVEKERSRRLGTSILNQVVREAVTFKPPPRTRGGKRGRVYYCTQAAIRPPTFVFFVNDAKLFPETYRRFMEKQLRSNAGFPGTPIRLLWRSRRKMEKDEGQYLF