Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48276.t1 | XP_003608884.1 | 96.4 | 112 | 4 | 0 | 46 | 157 | 80 | 191 | 1.50E-54 | 222.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48276.t1 | P47923 | 94.6 | 112 | 6 | 0 | 46 | 157 | 80 | 191 | 8.7e-56 | 218.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48276.t1 | B7FMP6 | 96.4 | 112 | 4 | 0 | 46 | 157 | 80 | 191 | 1.1e-54 | 222.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049182 | MS.gene48276 | -0.851439 | 8.87E-61 | -1.69E-46 |
| MS.gene050165 | MS.gene48276 | 0.815748 | 7.89E-52 | -1.69E-46 |
| MS.gene050333 | MS.gene48276 | 0.834622 | 2.69E-56 | -1.69E-46 |
| MS.gene05087 | MS.gene48276 | 0.832864 | 7.41E-56 | -1.69E-46 |
| MS.gene051579 | MS.gene48276 | -0.813338 | 2.69E-51 | -1.69E-46 |
| MS.gene052040 | MS.gene48276 | -0.810647 | 1.04E-50 | -1.69E-46 |
| MS.gene054635 | MS.gene48276 | -0.816419 | 5.58E-52 | -1.69E-46 |
| MS.gene054638 | MS.gene48276 | 0.803644 | 3.16E-49 | -1.69E-46 |
| MS.gene055204 | MS.gene48276 | -0.802355 | 5.84E-49 | -1.69E-46 |
| MS.gene055634 | MS.gene48276 | 0.862472 | 4.95E-64 | -1.69E-46 |
| MS.gene055638 | MS.gene48276 | 0.800527 | 1.38E-48 | -1.69E-46 |
| MS.gene055849 | MS.gene48276 | 0.807115 | 5.92E-50 | -1.69E-46 |
| MS.gene057148 | MS.gene48276 | 0.96931 | 6.19E-130 | -1.69E-46 |
| MS.gene059026 | MS.gene48276 | 0.839924 | 1.18E-57 | -1.69E-46 |
| MS.gene060337 | MS.gene48276 | -0.806919 | 6.51E-50 | -1.69E-46 |
| MS.gene060522 | MS.gene48276 | -0.806284 | 8.86E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48276.t1 | MTR_4g104030 | 96.429 | 112 | 4 | 0 | 46 | 157 | 80 | 191 | 4.07e-76 | 228 |
| MS.gene48276.t1 | MTR_8g007235 | 68.807 | 109 | 34 | 0 | 49 | 157 | 3 | 111 | 9.17e-51 | 160 |
| MS.gene48276.t1 | MTR_8g099450 | 57.658 | 111 | 47 | 0 | 47 | 157 | 83 | 193 | 3.17e-45 | 149 |
| MS.gene48276.t1 | MTR_8g021233 | 28.571 | 98 | 70 | 0 | 47 | 144 | 70 | 167 | 7.26e-11 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48276.t1 | AT5G63310 | 85.714 | 112 | 16 | 0 | 46 | 157 | 81 | 192 | 2.11e-66 | 203 |
| MS.gene48276.t1 | AT4G09320 | 65.455 | 110 | 38 | 0 | 48 | 157 | 1 | 110 | 3.52e-50 | 159 |
| MS.gene48276.t1 | AT4G11010 | 58.559 | 111 | 46 | 0 | 47 | 157 | 87 | 197 | 2.18e-45 | 150 |
| MS.gene48276.t1 | AT4G23900 | 56.757 | 111 | 48 | 0 | 47 | 157 | 86 | 196 | 3.74e-43 | 144 |
| MS.gene48276.t1 | AT4G23895 | 56.757 | 111 | 48 | 0 | 47 | 157 | 316 | 426 | 1.01e-40 | 143 |
| MS.gene48276.t1 | AT1G17410 | 38.095 | 105 | 62 | 1 | 49 | 150 | 33 | 137 | 4.62e-16 | 72.4 |
| MS.gene48276.t1 | AT1G17410 | 39.000 | 100 | 58 | 1 | 54 | 150 | 1 | 100 | 9.92e-16 | 70.9 |
| MS.gene48276.t1 | AT1G17410 | 39.560 | 91 | 55 | 0 | 54 | 144 | 1 | 91 | 2.55e-15 | 69.3 |
Find 54 sgRNAs with CRISPR-Local
Find 303 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCGGGCCCCGTTGTGTCTA+TGG | 0.249639 | 8.1:+20414693 | MS.gene48276:CDS |
| CCATCAGCACGTAAGCTTAT+AGG | 0.269590 | 8.1:+20414826 | MS.gene48276:CDS |
| GGAAGAAAGACTTCTGATTT+AGG | 0.280449 | 8.1:-20414648 | None:intergenic |
| ATATACTTACATGAAATAAT+AGG | 0.281609 | 8.1:-20411781 | None:intergenic |
| TTCCATTTGCTGCAGCTCTA+TGG | 0.293061 | 8.1:+20416084 | MS.gene48276:CDS |
| AGTTGACCAGACTTATATTA+TGG | 0.331268 | 8.1:+20413121 | MS.gene48276:CDS |
| AGGTGGGTGAAATTATTTCT+AGG | 0.357399 | 8.1:+20413285 | MS.gene48276:intron |
| ATTTGCAGCCCCTCCACTCT+TGG | 0.366637 | 8.1:-20411934 | None:intergenic |
| GGAGACTTTGCTGTTGAAAC+AGG | 0.369768 | 8.1:+20414889 | MS.gene48276:CDS |
| CTGATTGACTATATTACTTC+GGG | 0.369900 | 8.1:+20414676 | MS.gene48276:CDS |
| CCTCCACTCTTGGCCACCTC+AGG | 0.392969 | 8.1:-20411924 | None:intergenic |
| AACCATAGAGCTGCAGCAAA+TGG | 0.406290 | 8.1:-20416086 | None:intergenic |
| GTAATATAGTCAATCAGCTT+AGG | 0.409337 | 8.1:-20414670 | None:intergenic |
| TATTTCTAGGTTTGAGAAGA+AGG | 0.414911 | 8.1:+20413298 | MS.gene48276:CDS |
| TATACTTACATGAAATAATA+GGG | 0.419351 | 8.1:-20411780 | None:intergenic |
| TGCTGCAGCTCTATGGTTCA+AGG | 0.433624 | 8.1:+20416091 | MS.gene48276:CDS |
| GCAGAACCAGGCACAATAAG+AGG | 0.440871 | 8.1:+20414868 | MS.gene48276:CDS |
| GTTTATTATTCTCTTAGCCA+TGG | 0.442524 | 8.1:-20416149 | None:intergenic |
| AAGTCTCCTCTTATTGTGCC+TGG | 0.451702 | 8.1:-20414874 | None:intergenic |
| CAACATTAACCAGCAAATAC+AGG | 0.453147 | 8.1:-20411748 | None:intergenic |
| TGCAAGGCTTGGGAGGGTGT+TGG | 0.459104 | 8.1:+20414796 | MS.gene48276:intron |
| AGTTATACCATAGACACAAC+GGG | 0.464995 | 8.1:-20414700 | None:intergenic |
| GCTGATTGACTATATTACTT+CGG | 0.470279 | 8.1:+20414675 | MS.gene48276:CDS |
| AAGACCACGTTGCACGCCAT+CGG | 0.478860 | 8.1:-20413150 | None:intergenic |
| GTTTCACCATAATATAAGTC+TGG | 0.480267 | 8.1:-20413127 | None:intergenic |
| TAATATAGTCAATCAGCTTA+GGG | 0.480624 | 8.1:-20414669 | None:intergenic |
| GCAAATGCAGAGTGTGATAG+AGG | 0.490730 | 8.1:+20411951 | MS.gene48276:CDS |
| AGACCACGTTGCACGCCATC+GGG | 0.491598 | 8.1:-20413149 | None:intergenic |
| TTATGTTTGCAAGGCTTGGG+AGG | 0.497838 | 8.1:+20414789 | MS.gene48276:intron |
| CTGAGGTGGCCAAGAGTGGA+GGG | 0.501828 | 8.1:+20411925 | MS.gene48276:CDS |
| CTGTATTTGCTGGTTAATGT+TGG | 0.502303 | 8.1:+20411749 | MS.gene48276:CDS |
| ATTTCTAGGTTTGAGAAGAA+GGG | 0.506715 | 8.1:+20413299 | MS.gene48276:CDS |
| ATTCTCTTAGCCATGGATGT+AGG | 0.509659 | 8.1:-20416142 | None:intergenic |
| CTTAGCCATGGATGTAGGAC+AGG | 0.510478 | 8.1:-20416137 | None:intergenic |
| TAGCCTGAGGTGGCCAAGAG+TGG | 0.519401 | 8.1:+20411921 | MS.gene48276:intron |
| ATGGTTTCAGGAGCATTACA+AGG | 0.519469 | 8.1:+20414624 | MS.gene48276:intron |
| CCTATAAGCTTACGTGCTGA+TGG | 0.530791 | 8.1:-20414826 | None:intergenic |
| TATGTTTGCAAGGCTTGGGA+GGG | 0.532452 | 8.1:+20414790 | MS.gene48276:intron |
| AGGAAGGCGAATTATGTGAA+TGG | 0.560837 | 8.1:+20416111 | MS.gene48276:CDS |
| CCTGAGGTGGCCAAGAGTGG+AGG | 0.567614 | 8.1:+20411924 | MS.gene48276:CDS |
| GTGCCTGGTTCTGCTTGCAG+AGG | 0.569047 | 8.1:-20414859 | None:intergenic |
| AATCCTCTGCAAGCAGAACC+AGG | 0.581765 | 8.1:+20414856 | MS.gene48276:CDS |
| GGACTCCTGTCCTACATCCA+TGG | 0.592922 | 8.1:+20416132 | MS.gene48276:CDS |
| CAGAGTGTGATAGAGGAATG+TGG | 0.602269 | 8.1:+20411958 | MS.gene48276:CDS |
| TATATTATGGTGAAACCCGA+TGG | 0.602776 | 8.1:+20413134 | MS.gene48276:CDS |
| TGAGGTGGCCAAGAGTGGAG+GGG | 0.609261 | 8.1:+20411926 | MS.gene48276:CDS |
| AGAGTGTGATAGAGGAATGT+GGG | 0.609562 | 8.1:+20411959 | MS.gene48276:CDS |
| ATGCTCTAAAGAATTAGCTG+AGG | 0.624258 | 8.1:+20413352 | MS.gene48276:CDS |
| ACTTTGCTGTTGAAACAGGA+AGG | 0.628376 | 8.1:+20414893 | MS.gene48276:CDS |
| GCAGCTCTATGGTTCAAGGA+AGG | 0.644056 | 8.1:+20416095 | MS.gene48276:CDS |
| GAGTTATACCATAGACACAA+CGG | 0.655073 | 8.1:-20414701 | None:intergenic |
| AAACCCGATGGCGTGCAACG+TGG | 0.663446 | 8.1:+20413146 | MS.gene48276:CDS |
| ATGGATAGCATAGCCTGAGG+TGG | 0.670586 | 8.1:+20411911 | MS.gene48276:intron |
| GTTATACCATAGACACAACG+GGG | 0.788135 | 8.1:-20414699 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATTTAAATTATTAAATT+TGG | - | chr8.1:20412085-20412104 | None:intergenic | 0.0% |
| !! | TTATTATTAAATTTCACAAT+TGG | - | chr8.1:20412445-20412464 | None:intergenic | 10.0% |
| !! | ATAAATGCTAAAATAGAAAA+AGG | - | chr8.1:20415439-20415458 | None:intergenic | 15.0% |
| !! | ATATACTTACATGAAATAAT+AGG | - | chr8.1:20411784-20411803 | None:intergenic | 15.0% |
| !! | TATACTTACATGAAATAATA+GGG | - | chr8.1:20411783-20411802 | None:intergenic | 15.0% |
| !! | TTCAATATATTACATTGATA+TGG | + | chr8.1:20413489-20413508 | MS.gene48276:intron | 15.0% |
| !!! | CATATTCTTATTTTTTTGAA+GGG | + | chr8.1:20411834-20411853 | MS.gene48276:intron | 15.0% |
| !!! | TCATATTCTTATTTTTTTGA+AGG | + | chr8.1:20411833-20411852 | MS.gene48276:intron | 15.0% |
| !! | AAAAAAAATCTATTGACAGA+CGG | + | chr8.1:20412515-20412534 | MS.gene48276:intron | 20.0% |
| !! | AACTAAATATCGACAAAATA+AGG | - | chr8.1:20415971-20415990 | None:intergenic | 20.0% |
| !! | AAGAAAAATATAAGTTGCAA+AGG | + | chr8.1:20415890-20415909 | MS.gene48276:intron | 20.0% |
| !! | AGAAAAATATAAGTTGCAAA+GGG | + | chr8.1:20415891-20415910 | MS.gene48276:intron | 20.0% |
| !! | CCTGCTAATATATAAATTAA+CGG | - | chr8.1:20415190-20415209 | None:intergenic | 20.0% |
| !! | CTATCGATATAATGTTAAAA+TGG | + | chr8.1:20412164-20412183 | MS.gene48276:intron | 20.0% |
| !! | GAAACAAAAATTGAAGTTTA+AGG | + | chr8.1:20413233-20413252 | MS.gene48276:intron | 20.0% |
| !! | TGACTTATTGTGATTATTTA+TGG | + | chr8.1:20414605-20414624 | MS.gene48276:intron | 20.0% |
| !! | TGCATAGATTGAATTTATTT+AGG | - | chr8.1:20413914-20413933 | None:intergenic | 20.0% |
| !!! | ATGTTTTTTTTTTAATGTGC+AGG | + | chr8.1:20413094-20413113 | MS.gene48276:intron | 20.0% |
| !!! | ATTATCCTTTTCAAAAAAGT+TGG | - | chr8.1:20412560-20412579 | None:intergenic | 20.0% |
| !!! | ATTATTATGAAAAGCACAAT+TGG | - | chr8.1:20413550-20413569 | None:intergenic | 20.0% |
| !!! | CATTTTAACATTATATCGAT+AGG | - | chr8.1:20412166-20412185 | None:intergenic | 20.0% |
| !!! | TAATTGTTGTTTTGTTGAAT+TGG | + | chr8.1:20413259-20413278 | MS.gene48276:intron | 20.0% |
| !!! | TATGTGACTATATTTCTTTT+AGG | - | chr8.1:20412286-20412305 | None:intergenic | 20.0% |
| !!! | TGCTTTTATTCATTTAATGA+GGG | - | chr8.1:20414257-20414276 | None:intergenic | 20.0% |
| !!! | TGTCAATAGATTTTTTTTCA+AGG | - | chr8.1:20412513-20412532 | None:intergenic | 20.0% |
| !!! | TTATCCTTTTCAAAAAAGTT+GGG | - | chr8.1:20412559-20412578 | None:intergenic | 20.0% |
| !!! | TTATTATGAAAAGCACAATT+GGG | - | chr8.1:20413549-20413568 | None:intergenic | 20.0% |
| !!! | TTTTGTCGATATTTAGTTAT+AGG | + | chr8.1:20415973-20415992 | MS.gene48276:intron | 20.0% |
| ! | AAAAAAATTCCTGTATTTGC+TGG | + | chr8.1:20411739-20411758 | MS.gene48276:CDS | 25.0% |
| ! | AAAAATATAAGTTGCAAAGG+GGG | + | chr8.1:20415893-20415912 | MS.gene48276:intron | 25.0% |
| ! | AAGTAGAAGATGAAAAAAGA+TGG | - | chr8.1:20412933-20412952 | None:intergenic | 25.0% |
| ! | ACTAGAAAAAGAGTTCATTA+TGG | + | chr8.1:20411892-20411911 | MS.gene48276:intron | 25.0% |
| ! | AGAATCAAGATAAGATTCAT+AGG | + | chr8.1:20414962-20414981 | MS.gene48276:intron | 25.0% |
| ! | AGTAAGAAACCATGAAAATA+TGG | - | chr8.1:20414478-20414497 | None:intergenic | 25.0% |
| ! | AGTAGAAGATGAAAAAAGAT+GGG | - | chr8.1:20412932-20412951 | None:intergenic | 25.0% |
| ! | CATGAAAATATGGATACAAT+TGG | - | chr8.1:20414468-20414487 | None:intergenic | 25.0% |
| ! | CCAATTTAATAGATTACTAC+AGG | - | chr8.1:20414192-20414211 | None:intergenic | 25.0% |
| ! | CCGTAAAAGAAATTAAAGTT+CGG | + | chr8.1:20412355-20412374 | MS.gene48276:intron | 25.0% |
| ! | CCGTTAATTTATATATTAGC+AGG | + | chr8.1:20415187-20415206 | MS.gene48276:intron | 25.0% |
| ! | CCTGTAGTAATCTATTAAAT+TGG | + | chr8.1:20414189-20414208 | MS.gene48276:intron | 25.0% |
| ! | GAAAAATATAAGTTGCAAAG+GGG | + | chr8.1:20415892-20415911 | MS.gene48276:intron | 25.0% |
| ! | GAATCAAGATAAGATTCATA+GGG | + | chr8.1:20414963-20414982 | MS.gene48276:intron | 25.0% |
| ! | TAAGTCTACTCTATATCATA+TGG | - | chr8.1:20414504-20414523 | None:intergenic | 25.0% |
| ! | TAATATAGTCAATCAGCTTA+GGG | - | chr8.1:20414672-20414691 | None:intergenic | 25.0% |
| ! | TTAAAGAATCACAGTATTAC+AGG | - | chr8.1:20416051-20416070 | None:intergenic | 25.0% |
| ! | TTATAAACTTATGCTGAAGA+GGG | - | chr8.1:20415520-20415539 | None:intergenic | 25.0% |
| ! | TTCATTTAATGAGGGTTAAT+AGG | - | chr8.1:20414249-20414268 | None:intergenic | 25.0% |
| ! | TTCTTGTACTATCAAGTTTA+TGG | - | chr8.1:20414096-20414115 | None:intergenic | 25.0% |
| ! | TTGTGATTATTTATGGTTTC+AGG | + | chr8.1:20414612-20414631 | MS.gene48276:intron | 25.0% |
| ! | TTTATAAACTTATGCTGAAG+AGG | - | chr8.1:20415521-20415540 | None:intergenic | 25.0% |
| !! | ACTAGTTTAAGTTTAGACAA+GGG | - | chr8.1:20412253-20412272 | None:intergenic | 25.0% |
| !! | ATACAATTGGATTTTGTAAC+TGG | - | chr8.1:20414455-20414474 | None:intergenic | 25.0% |
| !! | ATATCGATAGGTTTTTCTTA+GGG | - | chr8.1:20412154-20412173 | None:intergenic | 25.0% |
| !! | CAATTGTATCCATATTTTCA+TGG | + | chr8.1:20414466-20414485 | MS.gene48276:intron | 25.0% |
| !! | GTGCTTTTATTCATTTAATG+AGG | - | chr8.1:20414258-20414277 | None:intergenic | 25.0% |
| !! | TAATTTCTTTTACGGTCTTT+TGG | - | chr8.1:20412350-20412369 | None:intergenic | 25.0% |
| !! | TATATCGATAGGTTTTTCTT+AGG | - | chr8.1:20412155-20412174 | None:intergenic | 25.0% |
| !!! | AAGAAGGGTTTTAAGTTAAT+TGG | + | chr8.1:20413314-20413333 | MS.gene48276:CDS | 25.0% |
| !!! | AAGATCTTTTAAGATACTTC+CGG | + | chr8.1:20413662-20413681 | MS.gene48276:intron | 25.0% |
| !!! | AGCAAATACAGGAATTTTTT+TGG | - | chr8.1:20411740-20411759 | None:intergenic | 25.0% |
| !!! | CCGAACTTTAATTTCTTTTA+CGG | - | chr8.1:20412358-20412377 | None:intergenic | 25.0% |
| !!! | GTTAATTTGCTATTTACACA+TGG | + | chr8.1:20414581-20414600 | MS.gene48276:intron | 25.0% |
| !!! | TGACTATATTTCTTTTAGGT+AGG | - | chr8.1:20412282-20412301 | None:intergenic | 25.0% |
| !!! | TTGTTTTGTTGAATTGGTTT+AGG | + | chr8.1:20413265-20413284 | MS.gene48276:intron | 25.0% |
| AAACCTCTTGTGTAAAAAAC+AGG | + | chr8.1:20415347-20415366 | MS.gene48276:intron | 30.0% | |
| AACCTCTTGTGTAAAAAACA+GGG | + | chr8.1:20415348-20415367 | MS.gene48276:intron | 30.0% | |
| AACTATACTCAATCCTTTCA+TGG | - | chr8.1:20414384-20414403 | None:intergenic | 30.0% | |
| AATAACAAGCTATACCTTAG+AGG | - | chr8.1:20413724-20413743 | None:intergenic | 30.0% | |
| ACACAAACGAGTTAAATTTC+AGG | - | chr8.1:20415623-20415642 | None:intergenic | 30.0% | |
| ACTATCTATCTATTGACAAG+CGG | + | chr8.1:20412485-20412504 | MS.gene48276:intron | 30.0% | |
| AGAGTCAACAATCTTATTGA+TGG | - | chr8.1:20413578-20413597 | None:intergenic | 30.0% | |
| AGTTGACCAGACTTATATTA+TGG | + | chr8.1:20413121-20413140 | MS.gene48276:CDS | 30.0% | |
| ATAACAAGCTATACCTTAGA+GGG | - | chr8.1:20413723-20413742 | None:intergenic | 30.0% | |
| ATGAACTTCACAATATGTCA+TGG | - | chr8.1:20414308-20414327 | None:intergenic | 30.0% | |
| ATTTAGAAGGAAATGCAGAA+AGG | - | chr8.1:20412909-20412928 | None:intergenic | 30.0% | |
| CACTTCAATTTCATATGTTC+TGG | + | chr8.1:20413192-20413211 | MS.gene48276:intron | 30.0% | |
| CATATTGTGAAGTTCATTCA+AGG | + | chr8.1:20414311-20414330 | MS.gene48276:intron | 30.0% | |
| CTAAGATAGGTATAGGTATA+CGG | + | chr8.1:20413963-20413982 | MS.gene48276:intron | 30.0% | |
| CTGATTGACTATATTACTTC+GGG | + | chr8.1:20414676-20414695 | MS.gene48276:CDS | 30.0% | |
| CTTATCTTGATTCTTGACTA+AGG | - | chr8.1:20414956-20414975 | None:intergenic | 30.0% | |
| CTTGACAAAATTACAAACTC+TGG | - | chr8.1:20415558-20415577 | None:intergenic | 30.0% | |
| GAAAAAAGATGGGATTTAGA+AGG | - | chr8.1:20412922-20412941 | None:intergenic | 30.0% | |
| GCTGATTGACTATATTACTT+CGG | + | chr8.1:20414675-20414694 | MS.gene48276:CDS | 30.0% | |
| GTAATATAGTCAATCAGCTT+AGG | - | chr8.1:20414673-20414692 | None:intergenic | 30.0% | |
| GTTTCACCATAATATAAGTC+TGG | - | chr8.1:20413130-20413149 | None:intergenic | 30.0% | |
| TAAGATAGGTATAGGTATAC+GGG | + | chr8.1:20413964-20413983 | MS.gene48276:intron | 30.0% | |
| TAGAATTCCCAAAAAAGTTG+TGG | + | chr8.1:20415488-20415507 | MS.gene48276:intron | 30.0% | |
| TCTGAATATGTTTCCATGAA+AGG | + | chr8.1:20414368-20414387 | MS.gene48276:intron | 30.0% | |
| TGAACTTAGTGCTAAAAGAT+AGG | - | chr8.1:20411812-20411831 | None:intergenic | 30.0% | |
| TTTGGCAGGAATATTATTCA+TGG | + | chr8.1:20415040-20415059 | MS.gene48276:intron | 30.0% | |
| ! | AAGATCTTGTGATGAACTTT+TGG | + | chr8.1:20415022-20415041 | MS.gene48276:intron | 30.0% |
| ! | AATTGGATTTTGTAACTGGA+TGG | - | chr8.1:20414451-20414470 | None:intergenic | 30.0% |
| ! | ATCCTTTTCGTTGCATTTAT+TGG | - | chr8.1:20415136-20415155 | None:intergenic | 30.0% |
| ! | ATTTCTAGGTTTGAGAAGAA+GGG | + | chr8.1:20413299-20413318 | MS.gene48276:CDS | 30.0% |
| ! | TCCTTTTCGTTGCATTTATT+GGG | - | chr8.1:20415135-20415154 | None:intergenic | 30.0% |
| ! | TTTGTTGAATTGGTTTAGGT+GGG | + | chr8.1:20413269-20413288 | MS.gene48276:intron | 30.0% |
| !! | GACTAGTTTAAGTTTAGACA+AGG | - | chr8.1:20412254-20412273 | None:intergenic | 30.0% |
| !! | TATTTCTAGGTTTGAGAAGA+AGG | + | chr8.1:20413298-20413317 | MS.gene48276:CDS | 30.0% |
| !! | TTTTGTTGAATTGGTTTAGG+TGG | + | chr8.1:20413268-20413287 | MS.gene48276:intron | 30.0% |
| !!! | CTAATTATGGGTTTTAGGTA+GGG | + | chr8.1:20414142-20414161 | MS.gene48276:intron | 30.0% |
| !!! | GTCTATTCCACAACTTTTTT+GGG | - | chr8.1:20415498-20415517 | None:intergenic | 30.0% |
| !!! | TTGTCCCAACTTTTTTGAAA+AGG | + | chr8.1:20412552-20412571 | MS.gene48276:intron | 30.0% |
| !!! | TTTCTGGTTTTATGTTTGCA+AGG | + | chr8.1:20414780-20414799 | MS.gene48276:intron | 30.0% |
| AATCCAAACTACTCAAAGAG+AGG | + | chr8.1:20412751-20412770 | MS.gene48276:intron | 35.0% | |
| ACAAGAAAGTCTCTTCAAGA+TGG | + | chr8.1:20414109-20414128 | MS.gene48276:intron | 35.0% | |
| ACCCAATAAATGCAACGAAA+AGG | + | chr8.1:20415131-20415150 | MS.gene48276:intron | 35.0% | |
| AGAGATGAAACATGAATGTC+AGG | + | chr8.1:20414062-20414081 | MS.gene48276:intron | 35.0% | |
| AGGAAGAAGAAGAAGAGAAA+TGG | + | chr8.1:20412771-20412790 | MS.gene48276:intron | 35.0% | |
| AGTTATACCATAGACACAAC+GGG | - | chr8.1:20414703-20414722 | None:intergenic | 35.0% | |
| AGTTTGTAAAGGAGAATGAC+AGG | + | chr8.1:20413465-20413484 | MS.gene48276:intron | 35.0% | |
| ATACGAGAGAAGCAATTAAG+TGG | - | chr8.1:20413017-20413036 | None:intergenic | 35.0% | |
| ATCCGCAAAATATACCTCAA+GGG | + | chr8.1:20411985-20412004 | MS.gene48276:intron | 35.0% | |
| ATTTGTCCTAGAAACAACCT+TGG | + | chr8.1:20415267-20415286 | MS.gene48276:intron | 35.0% | |
| CAACATTAACCAGCAAATAC+AGG | - | chr8.1:20411751-20411770 | None:intergenic | 35.0% | |
| CAACGAGATTGATCATTGAA+TGG | + | chr8.1:20415929-20415948 | MS.gene48276:intron | 35.0% | |
| CAATCTATGCAACAACAAGA+TGG | + | chr8.1:20413923-20413942 | MS.gene48276:intron | 35.0% | |
| CAATCTCGTTGTATCTAAGA+TGG | - | chr8.1:20415920-20415939 | None:intergenic | 35.0% | |
| CAATTGGAGAGGAACTAAAT+GGG | + | chr8.1:20413853-20413872 | MS.gene48276:intron | 35.0% | |
| CCTACCTAAAACCCATAATT+AGG | - | chr8.1:20414144-20414163 | None:intergenic | 35.0% | |
| CTCTTTGAGTAGTTTGGATT+TGG | - | chr8.1:20412751-20412770 | None:intergenic | 35.0% | |
| CTGAATCATGACACTATAAG+AGG | - | chr8.1:20415107-20415126 | None:intergenic | 35.0% | |
| CTTGTGTAAAAAACAGGGTA+AGG | + | chr8.1:20415353-20415372 | MS.gene48276:intron | 35.0% | |
| GAGATGAAACATGAATGTCA+GGG | + | chr8.1:20414063-20414082 | MS.gene48276:intron | 35.0% | |
| GAGTGTTAACAATACCACTA+TGG | - | chr8.1:20413699-20413718 | None:intergenic | 35.0% | |
| GAGTTATACCATAGACACAA+CGG | - | chr8.1:20414704-20414723 | None:intergenic | 35.0% | |
| GCACAAGTTGTATAAACTGT+TGG | + | chr8.1:20415758-20415777 | MS.gene48276:intron | 35.0% | |
| GGAAGAAAGACTTCTGATTT+AGG | - | chr8.1:20414651-20414670 | None:intergenic | 35.0% | |
| GTTATTGTCATGTGACTGAA+AGG | + | chr8.1:20415302-20415321 | MS.gene48276:intron | 35.0% | |
| GTTTGTAAAGGAGAATGACA+GGG | + | chr8.1:20413466-20413485 | MS.gene48276:intron | 35.0% | |
| TAAAACCCATAATTAGGCCA+TGG | - | chr8.1:20414138-20414157 | None:intergenic | 35.0% | |
| TACCTGTTGAATGTACTTTC+TGG | + | chr8.1:20414764-20414783 | MS.gene48276:intron | 35.0% | |
| TACGAGAGAAGCAATTAAGT+GGG | - | chr8.1:20413016-20413035 | None:intergenic | 35.0% | |
| TAGTATCCCATTCTCAATGA+GGG | + | chr8.1:20414731-20414750 | MS.gene48276:intron | 35.0% | |
| TATATTATGGTGAAACCCGA+TGG | + | chr8.1:20413134-20413153 | MS.gene48276:CDS | 35.0% | |
| TATCCGCAAAATATACCTCA+AGG | + | chr8.1:20411984-20412003 | MS.gene48276:intron | 35.0% | |
| TCAATTGGAGAGGAACTAAA+TGG | + | chr8.1:20413852-20413871 | MS.gene48276:intron | 35.0% | |
| TCTTGTGTTTGTGTTTGAGT+TGG | - | chr8.1:20412860-20412879 | None:intergenic | 35.0% | |
| TGCAGCAAATGGAAATAACT+GGG | - | chr8.1:20416078-20416097 | None:intergenic | 35.0% | |
| ! | AAAATATACCTCAAGGGCAT+TGG | + | chr8.1:20411991-20412010 | MS.gene48276:intron | 35.0% |
| ! | AACCAGAAAGTACATTCAAC+AGG | - | chr8.1:20414769-20414788 | None:intergenic | 35.0% |
| ! | AGGTGGGTGAAATTATTTCT+AGG | + | chr8.1:20413285-20413304 | MS.gene48276:intron | 35.0% |
| ! | ATGGCCTAATTATGGGTTTT+AGG | + | chr8.1:20414137-20414156 | MS.gene48276:intron | 35.0% |
| ! | ATTCATAGGGTGTGTTTTTC+TGG | + | chr8.1:20414976-20414995 | MS.gene48276:intron | 35.0% |
| ! | CTGTATTTGCTGGTTAATGT+TGG | + | chr8.1:20411749-20411768 | MS.gene48276:CDS | 35.0% |
| ! | GTCTTGTCTTTTATGCAGAT+TGG | - | chr8.1:20413892-20413911 | None:intergenic | 35.0% |
| ! | GTTTTATGTTTGCAAGGCTT+GGG | + | chr8.1:20414786-20414805 | MS.gene48276:intron | 35.0% |
| ! | TTGGCATGCATAAGCATTTT+AGG | + | chr8.1:20415724-20415743 | MS.gene48276:intron | 35.0% |
| !! | ATGCTCTAAAGAATTAGCTG+AGG | + | chr8.1:20413352-20413371 | MS.gene48276:CDS | 35.0% |
| !! | TAAGATTGTTGACTCTTAGC+AGG | + | chr8.1:20413582-20413601 | MS.gene48276:intron | 35.0% |
| !! | TTATTTTACCAATGCCCTTG+AGG | - | chr8.1:20412002-20412021 | None:intergenic | 35.0% |
| !! | TTTCTTGTTGTTACGACACA+GGG | + | chr8.1:20413439-20413458 | MS.gene48276:intron | 35.0% |
| !!! | AGGTATGGGTTTTGTTCAAA+AGG | - | chr8.1:20415829-20415848 | None:intergenic | 35.0% |
| !!! | CCTAATTATGGGTTTTAGGT+AGG | + | chr8.1:20414141-20414160 | MS.gene48276:intron | 35.0% |
| !!! | GGTCTATTCCACAACTTTTT+TGG | - | chr8.1:20415499-20415518 | None:intergenic | 35.0% |
| !!! | GTGTTTTTCTGGTTGATTTG+AGG | + | chr8.1:20414987-20415006 | MS.gene48276:intron | 35.0% |
| !!! | TACCCTGTTTTTTACACAAG+AGG | - | chr8.1:20415353-20415372 | None:intergenic | 35.0% |
| !!! | TTACACAAGAGGTTTTTTCC+TGG | - | chr8.1:20415342-20415361 | None:intergenic | 35.0% |
| !!! | TTGCTTCTTTTTCGGTAACA+GGG | - | chr8.1:20415787-20415806 | None:intergenic | 35.0% |
| !!! | TTTTAAGATACTTCCGGATC+AGG | + | chr8.1:20413668-20413687 | MS.gene48276:intron | 35.0% |
| !!! | TTTTCTTGTTGTTACGACAC+AGG | + | chr8.1:20413438-20413457 | MS.gene48276:intron | 35.0% |
| AAACCCAACAGTGTAAAGAG+TGG | + | chr8.1:20415857-20415876 | MS.gene48276:intron | 40.0% | |
| AAACTCTGGATTCTACTAGC+AGG | - | chr8.1:20415544-20415563 | None:intergenic | 40.0% | |
| AAGAAGAGAAATGGAAGCCA+TGG | + | chr8.1:20412780-20412799 | MS.gene48276:intron | 40.0% | |
| ACACACAATTCTGCGAACAT+AGG | - | chr8.1:20415646-20415665 | None:intergenic | 40.0% | |
| ACACAGGGTTCAGTTTGTAA+AGG | + | chr8.1:20413454-20413473 | MS.gene48276:intron | 40.0% | |
| ACGAGAGAAGCAATTAAGTG+GGG | - | chr8.1:20413015-20413034 | None:intergenic | 40.0% | |
| ACTAAAAGCTCCACCAATAC+CGG | + | chr8.1:20412979-20412998 | MS.gene48276:intron | 40.0% | |
| AGAAGAGAAATGGAAGCCAT+GGG | + | chr8.1:20412781-20412800 | MS.gene48276:intron | 40.0% | |
| AGAAGCAACGACTAATGAGA+TGG | - | chr8.1:20412229-20412248 | None:intergenic | 40.0% | |
| AGAGTGTGATAGAGGAATGT+GGG | + | chr8.1:20411959-20411978 | MS.gene48276:CDS | 40.0% | |
| AGGAAGGCGAATTATGTGAA+TGG | + | chr8.1:20416111-20416130 | MS.gene48276:CDS | 40.0% | |
| AGTGCACTAAAACTCCAACA+GGG | - | chr8.1:20415410-20415429 | None:intergenic | 40.0% | |
| ATAACTTTACCGTTGCACCA+AGG | - | chr8.1:20415287-20415306 | None:intergenic | 40.0% | |
| ATGCTCATCAAAGCAAACTG+TGG | - | chr8.1:20415462-20415481 | None:intergenic | 40.0% | |
| ATTATGGATAGCATAGCCTG+AGG | + | chr8.1:20411908-20411927 | MS.gene48276:intron | 40.0% | |
| CAACCACTCTTTACACTGTT+GGG | - | chr8.1:20415863-20415882 | None:intergenic | 40.0% | |
| CACTATGGTATATCCTGATC+CGG | - | chr8.1:20413684-20413703 | None:intergenic | 40.0% | |
| CATTGAGAATGGGATACTAG+TGG | - | chr8.1:20414730-20414749 | None:intergenic | 40.0% | |
| CCAATTGAACACCCTTACAA+TGG | - | chr8.1:20413840-20413859 | None:intergenic | 40.0% | |
| CTAGTATCCCATTCTCAATG+AGG | + | chr8.1:20414730-20414749 | MS.gene48276:intron | 40.0% | |
| CTGAAGAGACACTGTTGTAA+GGG | + | chr8.1:20413761-20413780 | MS.gene48276:intron | 40.0% | |
| CTGCAGCAAATGGAAATAAC+TGG | - | chr8.1:20416079-20416098 | None:intergenic | 40.0% | |
| CTTCCTCTCTTTGAGTAGTT+TGG | - | chr8.1:20412757-20412776 | None:intergenic | 40.0% | |
| GAGTAGTTTGGATTTGGATG+TGG | - | chr8.1:20412745-20412764 | None:intergenic | 40.0% | |
| GCAGAATTGTGTGTAAGTGT+GGG | + | chr8.1:20415652-20415671 | MS.gene48276:intron | 40.0% | |
| GGATACCATGGCCTAATTAT+GGG | + | chr8.1:20414130-20414149 | MS.gene48276:intron | 40.0% | |
| GTAACTGGATGGTTGGAATT+AGG | - | chr8.1:20414440-20414459 | None:intergenic | 40.0% | |
| GTGAAACCCTCATTGAGAAT+GGG | - | chr8.1:20414740-20414759 | None:intergenic | 40.0% | |
| GTTATACCATAGACACAACG+GGG | - | chr8.1:20414702-20414721 | None:intergenic | 40.0% | |
| TAAGGCTACACCAAAATGGT+GGG | + | chr8.1:20415371-20415390 | MS.gene48276:intron | 40.0% | |
| TCTCTTCAAGATGGATACCA+TGG | + | chr8.1:20414118-20414137 | MS.gene48276:intron | 40.0% | |
| TCTGAAGAGACACTGTTGTA+AGG | + | chr8.1:20413760-20413779 | MS.gene48276:intron | 40.0% | |
| TGGATACCATGGCCTAATTA+TGG | + | chr8.1:20414129-20414148 | MS.gene48276:intron | 40.0% | |
| TGTGAAACCCTCATTGAGAA+TGG | - | chr8.1:20414741-20414760 | None:intergenic | 40.0% | |
| TTGTTAACACTCTCCCTCTA+AGG | + | chr8.1:20413707-20413726 | MS.gene48276:intron | 40.0% | |
| ! | AAGGAAATGCAGAAAGGTGT+TGG | - | chr8.1:20412903-20412922 | None:intergenic | 40.0% |
| ! | CTTTACACTGTTGGGTTTTG+TGG | - | chr8.1:20415855-20415874 | None:intergenic | 40.0% |
| ! | GGATTTTGTAACTGGATGGT+TGG | - | chr8.1:20414447-20414466 | None:intergenic | 40.0% |
| ! | TAGAAACAACCTTGGTGCAA+CGG | + | chr8.1:20415275-20415294 | MS.gene48276:intron | 40.0% |
| ! | TATTGGTGGAGCTTTTAGTG+CGG | - | chr8.1:20412978-20412997 | None:intergenic | 40.0% |
| ! | TCTTGTGATGAACTTTTGGC+AGG | + | chr8.1:20415026-20415045 | MS.gene48276:intron | 40.0% |
| ! | TGCCCTTGAGGTATATTTTG+CGG | - | chr8.1:20411990-20412009 | None:intergenic | 40.0% |
| !! | AAGCATTTTAGGTGATGCAC+AGG | + | chr8.1:20415735-20415754 | MS.gene48276:intron | 40.0% |
| !! | ACACGCTCTAAGATAGGTAT+AGG | + | chr8.1:20413956-20413975 | MS.gene48276:intron | 40.0% |
| !! | ACTTTGCTGTTGAAACAGGA+AGG | + | chr8.1:20414893-20414912 | MS.gene48276:CDS | 40.0% |
| !! | AGCATTTTAGGTGATGCACA+GGG | + | chr8.1:20415736-20415755 | MS.gene48276:intron | 40.0% |
| !! | AGGAAATGCAGAAAGGTGTT+GGG | - | chr8.1:20412902-20412921 | None:intergenic | 40.0% |
| !! | ATGGTTTCAGGAGCATTACA+AGG | + | chr8.1:20414624-20414643 | MS.gene48276:intron | 40.0% |
| !! | CCATTGTAAGGGTGTTCAAT+TGG | + | chr8.1:20413837-20413856 | MS.gene48276:intron | 40.0% |
| !! | GCTCACTGTTGCTTCTTTTT+CGG | - | chr8.1:20415795-20415814 | None:intergenic | 40.0% |
| !! | GGTTTTATGTTTGCAAGGCT+TGG | + | chr8.1:20414785-20414804 | MS.gene48276:intron | 40.0% |
| !! | TGTGTTTGTGTTTGAGTTGG+TGG | - | chr8.1:20412857-20412876 | None:intergenic | 40.0% |
| !! | TGTTGGAGTTTTAGTGCACT+GGG | + | chr8.1:20415410-20415429 | MS.gene48276:intron | 40.0% |
| !! | TTCTGGTTGATTTGAGGATG+TGG | + | chr8.1:20414993-20415012 | MS.gene48276:intron | 40.0% |
| !!! | GTTGCTTCTTTTTCGGTAAC+AGG | - | chr8.1:20415788-20415807 | None:intergenic | 40.0% |
| AACCATAGAGCTGCAGCAAA+TGG | - | chr8.1:20416089-20416108 | None:intergenic | 45.0% | |
| AAGTCTCCTCTTATTGTGCC+TGG | - | chr8.1:20414877-20414896 | None:intergenic | 45.0% | |
| AGGGTAAGGCTACACCAAAA+TGG | + | chr8.1:20415367-20415386 | MS.gene48276:intron | 45.0% | |
| AGTCAATCTGTGGTGAGAAG+GGG | + | chr8.1:20413987-20414006 | MS.gene48276:intron | 45.0% | |
| CAGAGTGTGATAGAGGAATG+TGG | + | chr8.1:20411958-20411977 | MS.gene48276:CDS | 45.0% | |
| CAGTGCACTAAAACTCCAAC+AGG | - | chr8.1:20415411-20415430 | None:intergenic | 45.0% | |
| CCATCAGCACGTAAGCTTAT+AGG | + | chr8.1:20414826-20414845 | MS.gene48276:CDS | 45.0% | |
| CCTATAAGCTTACGTGCTGA+TGG | - | chr8.1:20414829-20414848 | None:intergenic | 45.0% | |
| CGCAGAATTGTGTGTAAGTG+TGG | + | chr8.1:20415651-20415670 | MS.gene48276:intron | 45.0% | |
| CGGATCAGGATATACCATAG+TGG | + | chr8.1:20413682-20413701 | MS.gene48276:intron | 45.0% | |
| GAAAATGGCGAGCGTGAAAT+AGG | + | chr8.1:20415076-20415095 | MS.gene48276:intron | 45.0% | |
| GAAACATGAATGTCAGGGTC+TGG | + | chr8.1:20414068-20414087 | MS.gene48276:intron | 45.0% | |
| GAGAAGCAATTAAGTGGGGA+AGG | - | chr8.1:20413011-20413030 | None:intergenic | 45.0% | |
| GAGTCAATCTGTGGTGAGAA+GGG | + | chr8.1:20413986-20414005 | MS.gene48276:intron | 45.0% | |
| GCAAATGCAGAGTGTGATAG+AGG | + | chr8.1:20411951-20411970 | MS.gene48276:CDS | 45.0% | |
| GCAACCACTCTTTACACTGT+TGG | - | chr8.1:20415864-20415883 | None:intergenic | 45.0% | |
| GCTGTTGAAACAGGAAGGTA+AGG | + | chr8.1:20414898-20414917 | MS.gene48276:intron | 45.0% | |
| GGAACGACAAAAAGAGAGAC+AGG | + | chr8.1:20414163-20414182 | MS.gene48276:intron | 45.0% | |
| GTAAGGCTACACCAAAATGG+TGG | + | chr8.1:20415370-20415389 | MS.gene48276:intron | 45.0% | |
| TAAGTGGGGAAGGAAAATGC+CGG | - | chr8.1:20413001-20413020 | None:intergenic | 45.0% | |
| TATGTTTGCAAGGCTTGGGA+GGG | + | chr8.1:20414790-20414809 | MS.gene48276:intron | 45.0% | |
| TCATGTGACTGAAAGGTCAC+AGG | + | chr8.1:20415309-20415328 | MS.gene48276:intron | 45.0% | |
| TTATGTTTGCAAGGCTTGGG+AGG | + | chr8.1:20414789-20414808 | MS.gene48276:intron | 45.0% | |
| ! | AAGGAAAATGCCGGTATTGG+TGG | - | chr8.1:20412992-20413011 | None:intergenic | 45.0% |
| ! | ACTGTTGTAAGGGTGTGCAA+TGG | + | chr8.1:20413771-20413790 | MS.gene48276:intron | 45.0% |
| ! | CATCTCTTTTTGCTCTGCTC+TGG | - | chr8.1:20414049-20414068 | None:intergenic | 45.0% |
| ! | GCTTTTAGTGCGGATGGTTT+TGG | - | chr8.1:20412968-20412987 | None:intergenic | 45.0% |
| ! | TTCCATTTGCTGCAGCTCTA+TGG | + | chr8.1:20416084-20416103 | MS.gene48276:CDS | 45.0% |
| !! | AAAATGGTGGGACCCCTTTT+CGG | + | chr8.1:20415383-20415402 | MS.gene48276:intron | 45.0% |
| !! | AAATGCAGAAAGGTGTTGGG+TGG | - | chr8.1:20412899-20412918 | None:intergenic | 45.0% |
| !! | ATTTCACGCTCGCCATTTTC+AGG | - | chr8.1:20415076-20415095 | None:intergenic | 45.0% |
| !! | CTGTTGGAGTTTTAGTGCAC+TGG | + | chr8.1:20415409-20415428 | MS.gene48276:intron | 45.0% |
| !! | GAGCAAACACGCTCTAAGAT+AGG | + | chr8.1:20413950-20413969 | MS.gene48276:intron | 45.0% |
| !! | GGAGACTTTGCTGTTGAAAC+AGG | + | chr8.1:20414889-20414908 | MS.gene48276:CDS | 45.0% |
| !! | GTAAGGGTGTTCAATTGGAG+AGG | + | chr8.1:20413842-20413861 | MS.gene48276:intron | 45.0% |
| !! | GTTGCACCAAGGTTGTTTCT+AGG | - | chr8.1:20415276-20415295 | None:intergenic | 45.0% |
| !! | TACACTGTTGGGTTTTGTGG+TGG | - | chr8.1:20415852-20415871 | None:intergenic | 45.0% |
| !! | TTTCACGCTCGCCATTTTCA+GGG | - | chr8.1:20415075-20415094 | None:intergenic | 45.0% |
| AACTCCAACAGGGTCCGAAA+AGG | - | chr8.1:20415400-20415419 | None:intergenic | 50.0% | |
| AAGGTCACAGGTTCAAGTCC+AGG | + | chr8.1:20415321-20415340 | MS.gene48276:intron | 50.0% | |
| AATCCTCTGCAAGCAGAACC+AGG | + | chr8.1:20414856-20414875 | MS.gene48276:CDS | 50.0% | |
| ACTCCAACAGGGTCCGAAAA+GGG | - | chr8.1:20415399-20415418 | None:intergenic | 50.0% | |
| ATCTGTGGTGAGAAGGGGAT+TGG | + | chr8.1:20413992-20414011 | MS.gene48276:intron | 50.0% | |
| ATGGATAGCATAGCCTGAGG+TGG | + | chr8.1:20411911-20411930 | MS.gene48276:intron | 50.0% | |
| CAGTGTAAAGAGTGGTTGCG+AGG | + | chr8.1:20415865-20415884 | MS.gene48276:intron | 50.0% | |
| CTGTCCTACATCCATGGCTA+AGG | + | chr8.1:20416138-20416157 | MS.gene48276:CDS | 50.0% | |
| GAGGCGTGATGCAGTTGTAA+GGG | + | chr8.1:20413796-20413815 | MS.gene48276:intron | 50.0% | |
| GCAGAACCAGGCACAATAAG+AGG | + | chr8.1:20414868-20414887 | MS.gene48276:CDS | 50.0% | |
| GCAGCTCTATGGTTCAAGGA+AGG | + | chr8.1:20416095-20416114 | MS.gene48276:CDS | 50.0% | |
| GGAGTCAATCTGTGGTGAGA+AGG | + | chr8.1:20413985-20414004 | MS.gene48276:intron | 50.0% | |
| GGGAAGGAAAATGCCGGTAT+TGG | - | chr8.1:20412995-20413014 | None:intergenic | 50.0% | |
| GGTATACGGGAGTCAATCTG+TGG | + | chr8.1:20413977-20413996 | MS.gene48276:intron | 50.0% | |
| TCAGGATCACTCTTCGCTGT+TGG | - | chr8.1:20415605-20415624 | None:intergenic | 50.0% | |
| TGCTGCAGCTCTATGGTTCA+AGG | + | chr8.1:20416091-20416110 | MS.gene48276:CDS | 50.0% | |
| TGGCGAGCGTGAAATAGGTA+AGG | + | chr8.1:20415081-20415100 | MS.gene48276:intron | 50.0% | |
| TTACAATGGCACCTCAGCTG+TGG | - | chr8.1:20413826-20413845 | None:intergenic | 50.0% | |
| ! | GAAAAGGGGTCCCACCATTT+TGG | - | chr8.1:20415384-20415403 | None:intergenic | 50.0% |
| ! | GTTGTAAGGGTGTGCAATGG+CGG | + | chr8.1:20413774-20413793 | MS.gene48276:intron | 50.0% |
| !! | ACAGCTGAGGTGCCATTGTA+AGG | + | chr8.1:20413825-20413844 | MS.gene48276:intron | 50.0% |
| !! | ACTGTTGGGTTTTGTGGTGG+AGG | - | chr8.1:20415849-20415868 | None:intergenic | 50.0% |
| !! | CAGCTGAGGTGCCATTGTAA+GGG | + | chr8.1:20413826-20413845 | MS.gene48276:intron | 50.0% |
| !! | GGGTTTTGTGGTGGAGGTAT+GGG | - | chr8.1:20415843-20415862 | None:intergenic | 50.0% |
| !! | TGGGTTTTGTGGTGGAGGTA+TGG | - | chr8.1:20415844-20415863 | None:intergenic | 50.0% |
| !! | TGTTTGAGTTGGTGGTGCGT+AGG | - | chr8.1:20412849-20412868 | None:intergenic | 50.0% |
| !!! | AGTGCGGATGGTTTTGGCAT+AGG | - | chr8.1:20412962-20412981 | None:intergenic | 50.0% |
| AAGACCACGTTGCACGCCAT+CGG | - | chr8.1:20413153-20413172 | None:intergenic | 55.0% | |
| ATTTGCAGCCCCTCCACTCT+TGG | - | chr8.1:20411937-20411956 | None:intergenic | 55.0% | |
| CTCCAACAGGGTCCGAAAAG+GGG | - | chr8.1:20415398-20415417 | None:intergenic | 55.0% | |
| GGACTCCTGTCCTACATCCA+TGG | + | chr8.1:20416132-20416151 | MS.gene48276:CDS | 55.0% | |
| GGCAGTGACAGCCCTGAAAA+TGG | + | chr8.1:20415061-20415080 | MS.gene48276:intron | 55.0% | |
| ! | GAAGCCATGGGCGTGTTTTG+CGG | + | chr8.1:20412793-20412812 | MS.gene48276:intron | 55.0% |
| ! | GGAGGCGTGATGCAGTTGTA+AGG | + | chr8.1:20413795-20413814 | MS.gene48276:intron | 55.0% |
| ! | GGTGGAGCTTTTAGTGCGGA+TGG | - | chr8.1:20412974-20412993 | None:intergenic | 55.0% |
| AAACCCGATGGCGTGCAACG+TGG | + | chr8.1:20413146-20413165 | MS.gene48276:CDS | 60.0% | |
| AGACCACGTTGCACGCCATC+GGG | - | chr8.1:20413152-20413171 | None:intergenic | 60.0% | |
| CTGAGGTGGCCAAGAGTGGA+GGG | + | chr8.1:20411925-20411944 | MS.gene48276:CDS | 60.0% | |
| GCTTCCGCAAAACACGCCCA+TGG | - | chr8.1:20412800-20412819 | None:intergenic | 60.0% | |
| TAGCCTGAGGTGGCCAAGAG+TGG | + | chr8.1:20411921-20411940 | MS.gene48276:intron | 60.0% | |
| TGAGGTGGCCAAGAGTGGAG+GGG | + | chr8.1:20411926-20411945 | MS.gene48276:CDS | 60.0% | |
| TTCGGGCCCCGTTGTGTCTA+TGG | + | chr8.1:20414693-20414712 | MS.gene48276:CDS | 60.0% | |
| ! | GACCCCTTTTCGGACCCTGT+TGG | + | chr8.1:20415393-20415412 | MS.gene48276:intron | 60.0% |
| ! | GTAAGGGTGTGCAATGGCGG+AGG | + | chr8.1:20413777-20413796 | MS.gene48276:intron | 60.0% |
| ! | TGCAAGGCTTGGGAGGGTGT+TGG | + | chr8.1:20414796-20414815 | MS.gene48276:intron | 60.0% |
| !! | GTGCCTGGTTCTGCTTGCAG+AGG | - | chr8.1:20414862-20414881 | None:intergenic | 60.0% |
| !! | GTTGGTGGTGCGTAGGAGAG+AGG | - | chr8.1:20412842-20412861 | None:intergenic | 60.0% |
| CCTCCACTCTTGGCCACCTC+AGG | - | chr8.1:20411927-20411946 | None:intergenic | 65.0% | |
| CCTGAGGTGGCCAAGAGTGG+AGG | + | chr8.1:20411924-20411943 | MS.gene48276:CDS | 65.0% | |
| ! | GTAAGGGCACGCCACAGCTG+AGG | + | chr8.1:20413812-20413831 | MS.gene48276:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 20411716 | 20416158 | 20411716 | ID=MS.gene48276 |
| chr8.1 | mRNA | 20411716 | 20416158 | 20411716 | ID=MS.gene48276.t1;Parent=MS.gene48276 |
| chr8.1 | exon | 20411716 | 20411793 | 20411716 | ID=MS.gene48276.t1.exon1;Parent=MS.gene48276.t1 |
| chr8.1 | CDS | 20411716 | 20411793 | 20411716 | ID=cds.MS.gene48276.t1;Parent=MS.gene48276.t1 |
| chr8.1 | exon | 20411924 | 20411980 | 20411924 | ID=MS.gene48276.t1.exon2;Parent=MS.gene48276.t1 |
| chr8.1 | CDS | 20411924 | 20411980 | 20411924 | ID=cds.MS.gene48276.t1;Parent=MS.gene48276.t1 |
| chr8.1 | exon | 20413116 | 20413172 | 20413116 | ID=MS.gene48276.t1.exon3;Parent=MS.gene48276.t1 |
| chr8.1 | CDS | 20413116 | 20413172 | 20413116 | ID=cds.MS.gene48276.t1;Parent=MS.gene48276.t1 |
| chr8.1 | exon | 20413287 | 20413373 | 20413287 | ID=MS.gene48276.t1.exon4;Parent=MS.gene48276.t1 |
| chr8.1 | CDS | 20413287 | 20413373 | 20413287 | ID=cds.MS.gene48276.t1;Parent=MS.gene48276.t1 |
| chr8.1 | exon | 20414634 | 20414714 | 20414634 | ID=MS.gene48276.t1.exon5;Parent=MS.gene48276.t1 |
| chr8.1 | CDS | 20414634 | 20414714 | 20414634 | ID=cds.MS.gene48276.t1;Parent=MS.gene48276.t1 |
| chr8.1 | exon | 20414802 | 20414914 | 20414802 | ID=MS.gene48276.t1.exon6;Parent=MS.gene48276.t1 |
| chr8.1 | CDS | 20414802 | 20414914 | 20414802 | ID=cds.MS.gene48276.t1;Parent=MS.gene48276.t1 |
| chr8.1 | exon | 20416080 | 20416158 | 20416080 | ID=MS.gene48276.t1.exon7;Parent=MS.gene48276.t1 |
| chr8.1 | CDS | 20416080 | 20416158 | 20416080 | ID=cds.MS.gene48276.t1;Parent=MS.gene48276.t1 |
| Gene Sequence |
| Protein sequence |
