AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene48528


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene48528.t1 MTR_7g015770 95.322 342 16 0 1 342 1 342 0.0 680
MS.gene48528.t1 MTR_2g038510 48.596 356 163 6 3 342 1 352 7.43e-104 326
MS.gene48528.t1 MTR_5g021080 34.844 353 201 8 3 337 1 342 3.06e-52 186
MS.gene48528.t1 MTR_7g015810 86.598 97 5 1 1 89 1 97 2.89e-50 163
MS.gene48528.t1 MTR_7g015720 71.429 98 27 1 42 139 22 118 8.62e-43 145
MS.gene48528.t1 MTR_4g073840 30.809 383 216 9 3 345 1 374 1.58e-40 152
MS.gene48528.t1 MTR_3g055830 29.692 357 224 8 8 341 3 355 2.59e-40 151
MS.gene48528.t1 MTR_1g078190 29.296 355 225 6 3 336 1 350 3.03e-39 148
MS.gene48528.t1 MTR_3g056635 29.014 355 231 4 3 336 1 355 2.84e-38 144
MS.gene48528.t1 MTR_5g027910 25.634 355 252 6 3 347 1 353 2.93e-38 145
MS.gene48528.t1 MTR_3g456030 28.814 354 226 7 3 336 1 348 4.02e-38 145
MS.gene48528.t1 MTR_3g056590 27.451 357 234 7 3 336 1 355 4.48e-38 145
MS.gene48528.t1 MTR_5g027810 27.933 358 239 5 3 347 1 352 1.12e-37 144
MS.gene48528.t1 MTR_3g455910 28.045 353 232 7 3 336 1 350 7.42e-37 141
MS.gene48528.t1 MTR_5g027860 27.809 356 237 5 3 347 1 347 1.47e-36 140
MS.gene48528.t1 MTR_3g055870 28.857 350 225 9 7 336 2 347 3.75e-36 139
MS.gene48528.t1 MTR_3g012090 25.414 362 249 7 3 345 1 360 5.89e-36 139
MS.gene48528.t1 MTR_3g011390 26.891 357 238 5 3 336 1 357 3.97e-35 136
MS.gene48528.t1 MTR_3g012310 27.978 361 238 7 3 343 1 359 1.22e-34 135
MS.gene48528.t1 MTR_5g027870 24.786 351 248 5 8 346 5 351 1.30e-34 135
MS.gene48528.t1 MTR_1g016210 26.184 359 237 7 3 336 1 356 4.16e-33 130
MS.gene48528.t1 MTR_3g056585 28.693 352 227 6 3 336 1 346 1.35e-32 129
MS.gene48528.t1 MTR_3g011270 27.119 354 238 6 3 336 1 354 1.37e-32 129
MS.gene48528.t1 MTR_5g027900 25.714 350 230 5 3 336 1 336 5.02e-32 127
MS.gene48528.t1 MTR_3g055720 27.500 360 228 7 3 336 1 353 6.36e-32 127
MS.gene48528.t1 MTR_3g012240 26.829 369 240 10 3 345 48 412 1.52e-31 125
MS.gene48528.t1 MTR_3g011300 26.870 361 231 6 3 336 1 355 7.12e-31 124
MS.gene48528.t1 MTR_3g011420 26.479 355 240 5 3 336 1 355 1.26e-30 123
MS.gene48528.t1 MTR_3g011280 27.298 359 232 8 3 336 1 355 1.86e-30 122
MS.gene48528.t1 MTR_3g069210 27.557 352 229 8 3 336 1 344 9.19e-30 120
MS.gene48528.t1 MTR_3g011480 27.072 362 241 8 3 343 1 360 1.10e-29 120
MS.gene48528.t1 MTR_3g012060 27.095 358 233 8 3 336 1 354 1.11e-29 120
MS.gene48528.t1 MTR_7g078640 28.571 350 212 12 12 336 14 350 1.43e-29 120
MS.gene48528.t1 MTR_7g078300 28.857 350 211 12 12 336 14 350 1.48e-29 120
MS.gene48528.t1 MTR_5g072250 26.571 350 227 9 3 336 1 336 2.57e-29 119
MS.gene48528.t1 MTR_3g011460 27.248 367 236 11 3 344 1 361 3.61e-29 119
MS.gene48528.t1 MTR_3g086070 26.590 346 227 10 3 336 1 331 5.93e-29 118
MS.gene48528.t1 MTR_6g046440 26.404 356 234 12 3 345 1 341 8.04e-29 118
MS.gene48528.t1 MTR_0144s0060 25.872 344 230 9 3 336 1 329 4.08e-28 115
MS.gene48528.t1 MTR_0691s0020 26.158 367 240 8 3 344 1 361 5.27e-28 115
MS.gene48528.t1 MTR_6g047450 27.168 346 230 10 3 339 1 333 6.00e-28 115
MS.gene48528.t1 MTR_0133s0030 26.361 349 224 11 3 336 1 331 7.63e-28 115
MS.gene48528.t1 MTR_6g046130 25.948 343 231 8 3 336 1 329 9.51e-28 114
MS.gene48528.t1 MTR_5g072340 25.501 349 233 7 3 336 1 337 1.25e-27 114
MS.gene48528.t1 MTR_3g012050 25.143 350 239 6 3 336 1 343 2.50e-27 113
MS.gene48528.t1 MTR_1g078490 27.966 354 224 12 3 336 1 343 5.50e-27 112
MS.gene48528.t1 MTR_5g070490 26.136 352 226 9 3 336 1 336 8.45e-27 112
MS.gene48528.t1 MTR_0133s0020 26.513 347 224 11 3 336 1 329 9.98e-27 112
MS.gene48528.t1 MTR_3g056380 26.087 368 238 9 6 347 7 366 1.03e-26 111
MS.gene48528.t1 MTR_5g070960 25.215 349 234 7 3 336 1 337 1.27e-26 111
MS.gene48528.t1 MTR_3g011370 25.627 359 238 8 3 336 1 355 1.60e-26 111
MS.gene48528.t1 MTR_3g056360 27.052 329 220 6 23 336 8 331 1.68e-26 111
MS.gene48528.t1 MTR_3g056190 27.485 342 230 7 13 336 21 362 1.97e-26 110
MS.gene48528.t1 MTR_5g071310 25.072 347 232 10 3 336 1 332 2.16e-26 110
MS.gene48528.t1 MTR_0256s0050 27.044 318 206 9 3 308 1 304 4.59e-26 110
MS.gene48528.t1 MTR_0425s0020 26.685 356 228 8 3 339 9 350 5.32e-26 109
MS.gene48528.t1 MTR_3g056310 26.087 345 234 5 13 336 13 357 5.90e-26 109
MS.gene48528.t1 MTR_3g056410 26.911 327 219 6 25 336 1 322 5.99e-26 109
MS.gene48528.t1 MTR_3g056320 24.507 355 241 5 5 336 11 361 6.28e-26 109
MS.gene48528.t1 MTR_3g056620 26.136 352 221 8 13 336 21 361 7.41e-26 109
MS.gene48528.t1 MTR_5g071800 24.355 349 236 8 3 336 1 336 8.67e-26 108
MS.gene48528.t1 MTR_5g037450 26.667 360 223 11 3 336 1 345 1.10e-25 108
MS.gene48528.t1 MTR_6g452490 27.479 353 214 9 6 336 8 340 1.16e-25 108
MS.gene48528.t1 MTR_3g019340 25.868 317 211 6 39 336 15 326 1.43e-25 108
MS.gene48528.t1 MTR_3g022300 26.685 356 228 8 3 339 9 350 1.58e-25 108
MS.gene48528.t1 MTR_7g071940 25.852 352 222 11 3 336 1 331 1.79e-25 108
MS.gene48528.t1 MTR_5g071670 24.207 347 234 8 3 336 1 331 1.81e-25 108
MS.gene48528.t1 MTR_4g055630 25.284 352 229 9 3 336 1 336 3.43e-25 107
MS.gene48528.t1 MTR_3g012270 22.254 355 251 6 5 336 11 363 3.57e-25 107
MS.gene48528.t1 MTR_4g119195 26.062 353 220 9 12 336 14 353 3.61e-25 107
MS.gene48528.t1 MTR_8g010440 26.571 350 223 9 6 337 8 341 3.88e-25 107
MS.gene48528.t1 MTR_3g056200 25.352 355 230 7 5 336 13 355 4.14e-25 107
MS.gene48528.t1 MTR_6g046480 25.000 348 229 10 3 336 1 330 4.64e-25 107
MS.gene48528.t1 MTR_3g014080 31.090 312 180 12 44 336 50 345 5.21e-25 106
MS.gene48528.t1 MTR_4g119195 26.062 353 220 9 12 336 14 353 5.27e-25 106
MS.gene48528.t1 MTR_3g014080 31.090 312 180 12 44 336 50 345 5.35e-25 106
MS.gene48528.t1 MTR_3g012250 22.222 360 247 5 4 336 10 363 5.38e-25 106
MS.gene48528.t1 MTR_5g070470 26.074 349 230 8 3 336 1 336 5.80e-25 106
MS.gene48528.t1 MTR_3g070590 29.373 303 183 10 47 340 53 333 5.94e-25 106
MS.gene48528.t1 MTR_3g027420 27.035 344 227 10 3 340 9 334 7.66e-25 106
MS.gene48528.t1 MTR_3g033110 29.814 322 200 10 32 340 40 348 7.70e-25 106
MS.gene48528.t1 MTR_1g022380 24.929 353 224 11 3 336 1 331 8.39e-25 106
MS.gene48528.t1 MTR_3g027200 26.211 351 236 6 3 339 9 350 1.12e-24 105
MS.gene48528.t1 MTR_5g035300 23.433 367 243 12 3 346 1 352 1.13e-24 104
MS.gene48528.t1 MTR_5g035480 25.410 366 228 12 3 340 1 349 1.17e-24 105
MS.gene48528.t1 MTR_3g071130 29.373 303 183 10 47 340 53 333 1.23e-24 105
MS.gene48528.t1 MTR_3g028040 29.814 322 199 9 33 340 41 349 2.00e-24 105
MS.gene48528.t1 MTR_5g071823 25.215 349 233 9 3 336 1 336 2.67e-24 104
MS.gene48528.t1 MTR_5g071850 25.215 349 233 9 3 336 1 336 2.67e-24 104
MS.gene48528.t1 MTR_6g046930 25.291 344 231 10 3 336 1 328 2.67e-24 104
MS.gene48528.t1 MTR_1g030770 27.826 345 212 11 12 336 14 341 3.11e-24 104
MS.gene48528.t1 MTR_3g032500 29.321 324 190 11 35 336 43 349 3.13e-24 104
MS.gene48528.t1 MTR_3g023030 26.111 360 236 9 3 342 9 358 3.15e-24 104
MS.gene48528.t1 MTR_3g023030 26.111 360 236 9 3 342 9 358 3.48e-24 104
MS.gene48528.t1 MTR_1g037610 29.179 329 195 10 33 340 40 351 3.71e-24 104
MS.gene48528.t1 MTR_3g022130 26.822 343 218 9 3 339 9 324 3.77e-24 104
MS.gene48528.t1 MTR_3g435740 29.102 323 201 11 32 340 85 393 3.88e-24 104
MS.gene48528.t1 MTR_5g072140 26.062 353 225 10 3 336 1 336 4.60e-24 103
MS.gene48528.t1 MTR_3g031940 28.221 326 195 10 33 336 41 349 5.97e-24 103
MS.gene48528.t1 MTR_3g011280 25.905 359 205 8 3 336 1 323 6.36e-24 103
MS.gene48528.t1 MTR_5g071780 24.789 355 227 9 3 336 1 336 7.80e-24 103
MS.gene48528.t1 MTR_3g022600 26.211 351 236 7 3 339 9 350 8.57e-24 103
MS.gene48528.t1 MTR_0230s0010 27.586 348 226 12 3 338 1 334 9.93e-24 102
MS.gene48528.t1 MTR_4g050790 23.513 353 226 9 4 336 1 329 1.18e-23 102
MS.gene48528.t1 MTR_3g032370 28.793 323 193 10 33 336 39 343 1.53e-23 102
MS.gene48528.t1 MTR_3g015500 23.513 353 226 9 4 336 39 367 1.63e-23 102
MS.gene48528.t1 MTR_3g033860 29.102 323 180 10 43 340 51 349 2.54e-23 101
MS.gene48528.t1 MTR_3g032340 28.834 326 194 9 33 336 41 350 2.56e-23 101
MS.gene48528.t1 MTR_3g021170 27.445 317 203 9 32 340 35 332 2.80e-23 101
MS.gene48528.t1 MTR_8g036195 25.501 349 226 10 3 335 1 331 3.08e-23 101
MS.gene48528.t1 MTR_8g027540 26.301 346 227 11 6 335 8 341 3.14e-23 101
MS.gene48528.t1 MTR_5g071470 24.642 349 235 8 3 336 1 336 4.02e-23 101
MS.gene48528.t1 MTR_3g014320 28.869 336 187 13 33 340 40 351 4.43e-23 101
MS.gene48528.t1 MTR_3g032150 28.797 316 200 8 34 336 40 343 4.51e-23 101
MS.gene48528.t1 MTR_3g011360 26.184 359 206 10 3 336 1 325 4.84e-23 100
MS.gene48528.t1 MTR_3g030960 28.614 332 182 11 33 336 41 345 5.32e-23 100
MS.gene48528.t1 MTR_3g032200 27.864 323 196 9 35 336 43 349 6.17e-23 100
MS.gene48528.t1 MTR_6g052760 27.011 348 228 12 3 338 1 334 6.51e-23 100
MS.gene48528.t1 MTR_5g035240 23.706 367 241 12 3 346 1 351 7.19e-23 100
MS.gene48528.t1 MTR_3g030980 28.614 332 182 11 33 336 41 345 7.50e-23 100
MS.gene48528.t1 MTR_4g050410 28.532 361 219 15 2 340 5 348 1.18e-22 99.8
MS.gene48528.t1 MTR_3g032960 29.231 325 189 11 33 336 41 345 1.52e-22 99.4
MS.gene48528.t1 MTR_8g038570 28.308 325 203 11 33 336 41 356 1.62e-22 99.4
MS.gene48528.t1 MTR_5g071220 23.496 349 239 8 3 336 1 336 1.68e-22 99.4
MS.gene48528.t1 MTR_5g071220 23.496 349 239 8 3 336 1 336 1.85e-22 99.4
MS.gene48528.t1 MTR_5g071570 24.000 350 237 9 3 336 1 337 2.04e-22 99.0
MS.gene48528.t1 MTR_0511s0020 27.586 348 226 12 3 338 1 334 3.48e-22 98.6
MS.gene48528.t1 MTR_3g435720 28.395 324 193 11 33 336 41 345 4.90e-22 98.2
MS.gene48528.t1 MTR_8g011300 25.634 355 217 10 6 336 8 339 4.94e-22 97.8
MS.gene48528.t1 MTR_1g047800 27.221 349 216 13 3 336 10 335 5.70e-22 97.8
MS.gene48528.t1 MTR_3g032800 27.964 329 188 12 33 336 41 345 7.98e-22 97.4
MS.gene48528.t1 MTR_3g022230 26.685 356 222 11 3 336 9 347 8.99e-22 97.4
MS.gene48528.t1 MTR_0065s0100 24.642 349 232 8 6 336 8 343 1.08e-21 97.1
MS.gene48528.t1 MTR_3g033240 27.928 333 183 12 33 336 41 345 1.28e-21 96.7
MS.gene48528.t1 MTR_3g033130 28.205 312 194 14 33 336 41 330 1.44e-21 96.7
MS.gene48528.t1 MTR_3g019040 28.086 324 196 10 33 336 40 346 1.61e-21 96.3
MS.gene48528.t1 MTR_3g027250 26.415 318 205 8 33 339 35 334 1.77e-21 96.3
MS.gene48528.t1 MTR_3g033380 28.313 332 183 12 35 336 43 349 2.05e-21 96.3
MS.gene48528.t1 MTR_3g032760 30.263 304 181 11 49 336 57 345 2.22e-21 95.9
MS.gene48528.t1 MTR_5g076840 26.271 354 220 10 12 336 14 355 2.33e-21 95.9
MS.gene48528.t1 MTR_3g014510 27.744 328 201 10 33 340 40 351 2.75e-21 95.9
MS.gene48528.t1 MTR_8g038590 28.024 339 190 12 33 340 41 356 2.79e-21 95.9
MS.gene48528.t1 MTR_3g021100 27.692 325 201 9 33 343 36 340 2.97e-21 95.5
MS.gene48528.t1 MTR_3g026660 22.161 361 244 9 3 341 1 346 3.34e-21 95.5
MS.gene48528.t1 MTR_3g014390 28.086 324 195 10 33 336 40 345 3.49e-21 95.5
MS.gene48528.t1 MTR_3g015560 24.363 353 223 10 4 336 1 329 3.57e-21 95.1
MS.gene48528.t1 MTR_3g055740 27.632 228 145 5 3 213 1 225 3.65e-21 95.1
MS.gene48528.t1 MTR_1g090673 24.762 315 218 8 26 333 534 836 4.03e-21 95.5
MS.gene48528.t1 MTR_3g034380 28.707 317 189 11 43 340 51 349 4.20e-21 95.1
MS.gene48528.t1 MTR_3g026660 22.161 361 244 9 3 341 1 346 4.68e-21 95.1
MS.gene48528.t1 MTR_3g027470 33.166 199 119 4 148 340 70 260 5.09e-21 94.7
MS.gene48528.t1 MTR_3g018930 25.767 326 201 10 33 336 42 348 7.21e-21 94.4
MS.gene48528.t1 MTR_3g015550 24.294 354 224 11 3 336 37 366 7.44e-21 94.4
MS.gene48528.t1 MTR_3g018930 25.767 326 201 10 33 336 42 348 7.86e-21 94.4
MS.gene48528.t1 MTR_2g063777 26.807 332 196 11 33 340 41 349 1.33e-20 93.6
MS.gene48528.t1 MTR_0005s0200 26.433 314 183 10 47 336 73 362 1.41e-20 93.6
MS.gene48528.t1 MTR_3g015550 24.363 353 223 11 4 336 1 329 1.51e-20 93.6
MS.gene48528.t1 MTR_1g023600 24.716 352 228 11 3 336 1 333 1.58e-20 93.6
MS.gene48528.t1 MTR_3g033080 28.173 323 202 13 33 340 41 348 1.75e-20 93.2
MS.gene48528.t1 MTR_2g078070 24.789 355 226 9 6 336 8 345 1.76e-20 93.2
MS.gene48528.t1 MTR_7g091550 26.087 368 232 12 1 336 1 360 2.04e-20 93.2
MS.gene48528.t1 MTR_2g039010 26.543 324 209 10 35 341 13 324 2.25e-20 91.3
MS.gene48528.t1 MTR_4g094540 25.789 380 225 15 4 344 1 362 3.03e-20 92.4
MS.gene48528.t1 MTR_3g022790 25.382 327 205 9 33 340 35 341 4.78e-20 92.0
MS.gene48528.t1 MTR_3g023320 26.074 349 226 11 3 336 1 332 4.80e-20 92.0
MS.gene48528.t1 MTR_3g034460 28.797 316 174 11 61 348 52 344 4.88e-20 92.0
MS.gene48528.t1 MTR_7g078790 28.247 308 197 10 44 344 50 340 6.22e-20 91.7
MS.gene48528.t1 MTR_3g014360 28.829 333 176 13 33 340 40 336 6.59e-20 91.7
MS.gene48528.t1 MTR_2g038760 26.710 307 200 7 49 341 60 355 7.18e-20 91.7
MS.gene48528.t1 MTR_3g034430 27.301 326 182 11 43 340 51 349 7.48e-20 91.7
MS.gene48528.t1 MTR_3g021340 26.543 324 196 10 33 340 36 333 7.67e-20 91.3
MS.gene48528.t1 MTR_3g032110 27.879 330 188 10 33 336 41 346 7.78e-20 91.3
MS.gene48528.t1 MTR_1g090690 23.548 310 219 7 28 333 672 967 9.92e-20 91.3
MS.gene48528.t1 MTR_3g056630 25.379 264 160 6 3 250 1 243 1.20e-19 87.4
MS.gene48528.t1 MTR_8g011550 25.072 347 222 10 6 331 8 337 1.55e-19 90.5
MS.gene48528.t1 MTR_3g035960 26.888 331 209 9 30 343 38 352 2.32e-19 90.1
MS.gene48528.t1 MTR_6g046570 27.195 353 222 14 3 336 1 337 2.97e-19 89.7
MS.gene48528.t1 MTR_1g090680 24.465 327 211 12 26 333 583 892 3.61e-19 89.4
MS.gene48528.t1 MTR_7g491180 25.562 356 222 11 14 336 16 361 4.00e-19 89.0
MS.gene48528.t1 MTR_7g091190 25.562 356 222 11 14 336 16 361 4.00e-19 89.0
MS.gene48528.t1 MTR_3g035940 28.435 313 199 9 44 343 52 352 5.76e-19 89.0
MS.gene48528.t1 MTR_3g022400 26.282 312 205 7 34 340 36 327 6.41e-19 88.6
MS.gene48528.t1 MTR_3g022400 26.923 312 203 8 34 340 36 327 6.46e-19 88.6
MS.gene48528.t1 MTR_0002s0090 27.129 317 198 9 44 343 52 352 6.98e-19 88.6
MS.gene48528.t1 MTR_3g035500 27.129 317 198 9 44 343 52 352 6.98e-19 88.6
MS.gene48528.t1 MTR_6g046550 25.352 355 198 13 3 336 1 309 9.42e-19 87.8
MS.gene48528.t1 MTR_3g035480 27.742 310 191 9 44 336 52 345 1.20e-18 87.8
MS.gene48528.t1 MTR_3g015260 24.768 323 198 10 38 336 47 348 1.34e-18 87.8
MS.gene48528.t1 MTR_6g046620 24.845 322 193 9 3 313 1 284 1.37e-18 87.8
MS.gene48528.t1 MTR_8g030860 26.205 332 197 12 33 336 41 352 1.55e-18 87.4
MS.gene48528.t1 MTR_3g015260 24.768 323 198 10 38 336 47 348 1.67e-18 87.4
MS.gene48528.t1 MTR_5g039570 22.478 347 220 9 3 336 1 311 1.73e-18 87.0
MS.gene48528.t1 MTR_0003s0170 30.049 203 120 7 33 232 39 222 2.41e-18 84.0
MS.gene48528.t1 MTR_3g014470 29.373 303 171 12 33 312 40 322 2.51e-18 86.7
MS.gene48528.t1 MTR_8g011180 24.929 353 226 11 3 332 1 337 2.98e-18 86.7
MS.gene48528.t1 MTR_3g452130 25.581 215 147 5 18 219 14 228 4.46e-18 82.4
MS.gene48528.t1 MTR_5g035530 30.928 194 121 4 148 336 35 220 5.01e-18 85.9
MS.gene48528.t1 MTR_0002s0110 27.129 317 198 9 44 343 52 352 7.42e-18 85.5
MS.gene48528.t1 MTR_3g035840 27.950 322 181 14 44 339 52 348 8.35e-18 84.7
MS.gene48528.t1 MTR_8g106550 26.129 310 193 8 47 334 25 320 9.85e-18 85.1
MS.gene48528.t1 MTR_3g055930 23.117 385 250 11 3 346 1 380 1.17e-17 84.7
MS.gene48528.t1 MTR_3g455940 28.512 242 161 5 103 336 10 247 1.37e-17 84.3
MS.gene48528.t1 MTR_5g034770 21.488 363 229 10 3 341 1 331 1.41e-17 84.7
MS.gene48528.t1 MTR_3g056610 25.352 355 194 10 25 347 1 316 1.76e-17 84.0
MS.gene48528.t1 MTR_3g011620 30.769 195 123 5 152 341 169 356 2.53e-17 84.0
MS.gene48528.t1 MTR_5g035280 23.450 371 236 11 3 345 1 351 2.74e-17 83.6
MS.gene48528.t1 MTR_3g025360 25.893 336 208 9 34 340 36 359 2.84e-17 83.6
MS.gene48528.t1 MTR_2g038900 26.623 308 199 9 49 341 49 344 2.91e-17 83.6
MS.gene48528.t1 MTR_3g020890 26.959 319 207 11 33 344 41 340 2.94e-17 83.6
MS.gene48528.t1 MTR_8g011320 25.234 321 196 8 6 321 8 289 3.08e-17 83.6
MS.gene48528.t1 MTR_3g455900 29.949 197 134 3 148 341 42 237 4.38e-17 82.8
MS.gene48528.t1 MTR_4g119140 25.850 294 163 8 12 279 14 278 7.54e-17 82.0
MS.gene48528.t1 MTR_8g011170 26.453 344 196 12 12 332 14 323 9.10e-17 82.0
MS.gene48528.t1 MTR_3g015280 23.362 351 229 9 4 336 1 329 1.49e-16 81.3
MS.gene48528.t1 MTR_3g022920 26.948 308 195 9 34 336 36 318 1.80e-16 81.3
MS.gene48528.t1 MTR_2g038930 30.811 185 114 4 161 341 7 181 1.93e-16 81.3
MS.gene48528.t1 MTR_7g078630 24.746 295 185 8 72 341 7 289 2.54e-16 80.9
MS.gene48528.t1 MTR_3g018980 26.687 326 198 13 33 336 40 346 2.73e-16 80.5
MS.gene48528.t1 MTR_3g055710 29.508 183 127 1 156 336 9 191 2.95e-16 80.5
MS.gene48528.t1 MTR_3g018980 26.687 326 198 13 33 336 40 346 3.19e-16 80.5
MS.gene48528.t1 MTR_0267s0070 26.994 326 183 14 44 336 51 354 3.26e-16 80.5
MS.gene48528.t1 MTR_5g037500 21.607 361 246 10 3 341 1 346 3.73e-16 80.1
MS.gene48528.t1 MTR_2g039090 24.058 345 223 12 3 336 10 326 5.71e-16 79.7
MS.gene48528.t1 MTR_3g022570 24.432 352 213 10 26 336 29 368 5.81e-16 79.7
MS.gene48528.t1 MTR_1g037730 27.673 318 186 10 44 336 52 350 6.70e-16 78.6
MS.gene48528.t1 MTR_7g091140 24.581 358 223 11 14 336 16 361 9.10e-16 79.3
MS.gene48528.t1 MTR_5g095910 26.404 356 219 12 5 335 8 345 1.10e-15 79.0
MS.gene48528.t1 MTR_5g040900 23.171 328 194 11 3 308 1 292 1.37e-15 78.6
MS.gene48528.t1 MTR_7g091200 24.781 343 208 12 21 336 23 342 1.43e-15 78.6
MS.gene48528.t1 MTR_8g445980 25.926 351 228 11 3 336 7 342 1.89e-15 78.2
MS.gene48528.t1 MTR_1g047910 24.798 371 230 12 3 336 1 359 2.38e-15 77.8
MS.gene48528.t1 MTR_7g021000 25.000 352 226 11 3 340 9 336 2.56e-15 77.8
MS.gene48528.t1 MTR_7g091110 25.000 356 211 13 21 336 23 362 2.81e-15 77.4
MS.gene48528.t1 MTR_3g021400 26.316 323 189 12 34 340 30 319 2.99e-15 77.4
MS.gene48528.t1 MTR_7g021000 25.155 322 207 9 33 340 35 336 3.21e-15 77.4
MS.gene48528.t1 MTR_3g014040 28.302 318 184 10 44 336 52 350 3.55e-15 77.4
MS.gene48528.t1 MTR_2g014840 34.177 158 90 5 182 335 195 342 4.06e-15 77.0
MS.gene48528.t1 MTR_5g036460 32.948 173 104 5 163 335 205 365 6.08e-15 76.6
MS.gene48528.t1 MTR_4g019360 28.723 188 113 3 161 341 133 306 6.13e-15 76.6
MS.gene48528.t1 MTR_6g084550 25.378 331 193 11 33 343 41 337 7.86e-15 76.3
MS.gene48528.t1 MTR_7g013560 25.788 349 215 13 7 331 9 337 9.50e-15 75.9
MS.gene48528.t1 MTR_8g011280 29.897 194 115 6 148 332 21 202 1.01e-14 75.9
MS.gene48528.t1 MTR_3g021380 24.762 315 197 9 33 340 39 320 1.39e-14 75.5
MS.gene48528.t1 MTR_2g014730 25.071 351 206 12 5 335 8 321 1.40e-14 75.5
MS.gene48528.t1 MTR_3g013700 26.111 180 131 1 159 336 41 220 1.43e-14 75.1
MS.gene48528.t1 MTR_6g016420 28.125 192 126 6 156 342 151 335 1.45e-14 75.5
MS.gene48528.t1 MTR_6g016420 28.125 192 126 6 156 342 151 335 1.62e-14 75.1
MS.gene48528.t1 MTR_3g056615 26.957 230 139 6 4 211 14 236 1.78e-14 73.2
MS.gene48528.t1 MTR_2g014820 26.479 355 217 13 5 335 8 342 2.16e-14 74.7
MS.gene48528.t1 MTR_3g022870 25.478 314 218 7 32 340 31 333 2.17e-14 75.1
MS.gene48528.t1 MTR_3g022870 25.478 314 218 7 32 340 31 333 2.44e-14 74.7
MS.gene48528.t1 MTR_3g019000 24.465 327 210 12 28 340 38 341 3.75e-14 74.3
MS.gene48528.t1 MTR_3g056300 33.333 153 93 3 186 336 137 282 4.79e-14 73.6
MS.gene48528.t1 MTR_7g491190 24.490 343 190 12 21 336 23 323 8.12e-14 73.2
MS.gene48528.t1 MTR_1g028720 30.899 178 113 6 159 334 72 241 1.05e-13 72.8
MS.gene48528.t1 MTR_3g022060 28.834 163 102 4 148 304 96 250 1.13e-13 72.8
MS.gene48528.t1 MTR_3g007190 29.091 165 100 3 187 336 103 265 1.44e-13 72.4
MS.gene48528.t1 MTR_8g011590 28.502 207 131 6 134 332 23 220 2.13e-13 71.6
MS.gene48528.t1 MTR_7g091660 26.102 295 175 10 3 282 1 267 5.23e-13 70.1
MS.gene48528.t1 MTR_6g052455 31.313 198 121 8 148 338 36 225 6.68e-13 70.5
MS.gene48528.t1 MTR_1g022070 30.387 181 105 4 160 335 96 260 1.21e-12 69.3
MS.gene48528.t1 MTR_4g021690 24.242 330 206 9 28 336 26 332 1.88e-12 68.9
MS.gene48528.t1 MTR_5g035230 21.127 355 223 10 3 336 1 319 2.27e-12 68.2
MS.gene48528.t1 MTR_3g455860 34.831 89 53 1 3 86 1 89 4.59e-12 62.0
MS.gene48528.t1 MTR_8g020790 31.373 153 90 3 185 335 475 614 1.17e-11 66.6
MS.gene48528.t1 MTR_5g037460 27.320 194 130 5 148 336 34 221 1.17e-11 66.2
MS.gene48528.t1 MTR_5g037590 30.928 194 118 6 152 336 128 314 2.52e-11 65.5
MS.gene48528.t1 MTR_3g456060 35.294 85 50 1 8 87 3 87 2.76e-11 60.5
MS.gene48528.t1 MTR_8g011600 31.056 161 98 4 176 332 20 171 3.64e-11 64.7
MS.gene48528.t1 MTR_4g022480 25.152 330 203 9 28 336 26 332 5.74e-11 64.3
MS.gene48528.t1 MTR_4g022460 22.865 363 236 9 3 344 1 340 6.46e-11 64.3
MS.gene48528.t1 MTR_6g016430 25.740 338 203 11 26 342 27 337 7.37e-11 63.9
MS.gene48528.t1 MTR_0603s0010 26.804 194 107 6 161 341 244 415 7.75e-11 63.9
MS.gene48528.t1 MTR_6g052750 27.317 205 131 7 3 197 1 197 8.51e-11 61.2
MS.gene48528.t1 MTR_3g019080 32.911 158 89 5 155 306 187 333 8.83e-11 63.9
MS.gene48528.t1 MTR_3g058870 28.205 195 134 4 145 339 182 370 9.93e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene48528.t1 AT1G50180 39.828 349 193 5 3 341 1 342 1.54e-81 265
MS.gene48528.t1 AT1G58390 36.888 347 202 7 3 340 1 339 4.01e-65 221
MS.gene48528.t1 AT1G58390 36.888 347 202 7 3 340 1 339 4.01e-65 221
MS.gene48528.t1 AT1G58410 35.380 342 207 7 7 340 3 338 8.44e-64 218
MS.gene48528.t1 AT1G58410 35.380 342 207 7 7 340 3 338 1.50e-63 217
MS.gene48528.t1 AT1G58410 35.380 342 207 7 7 340 3 338 1.50e-63 217
MS.gene48528.t1 AT1G58410 35.380 342 207 7 7 340 3 338 1.50e-63 217
MS.gene48528.t1 AT5G43470 34.957 349 208 8 3 341 1 340 2.60e-63 216
MS.gene48528.t1 AT5G43470 34.957 349 208 8 3 341 1 340 2.60e-63 216
MS.gene48528.t1 AT5G43470 34.957 349 208 8 3 341 1 340 2.60e-63 216
MS.gene48528.t1 AT5G43470 34.957 349 208 8 3 341 1 340 2.60e-63 216
MS.gene48528.t1 AT1G58400 34.006 347 215 7 3 341 1 341 6.34e-61 210
MS.gene48528.t1 AT1G58400 34.006 347 215 7 3 341 1 341 6.34e-61 210
MS.gene48528.t1 AT5G48620 34.384 349 210 8 3 341 1 340 2.63e-60 208
MS.gene48528.t1 AT5G48620 34.384 349 210 8 3 341 1 340 2.63e-60 208
MS.gene48528.t1 AT5G48620 34.384 349 210 8 3 341 1 340 2.63e-60 208
MS.gene48528.t1 AT5G48620 34.384 349 210 8 3 341 1 340 2.63e-60 208
MS.gene48528.t1 AT5G48620 34.384 349 210 8 3 341 1 340 2.63e-60 208
MS.gene48528.t1 AT5G48620 34.384 349 210 8 3 341 1 340 2.63e-60 208
MS.gene48528.t1 AT1G59780 34.125 337 207 7 1 336 4 326 1.01e-58 204
MS.gene48528.t1 AT1G59780 34.328 335 205 7 3 336 1 321 1.03e-58 204
MS.gene48528.t1 AT1G53350 32.948 346 215 6 3 340 1 337 3.54e-58 202
MS.gene48528.t1 AT1G58807 34.195 348 210 8 3 340 1 339 5.85e-58 201
MS.gene48528.t1 AT1G59124 34.195 348 210 8 3 340 1 339 5.85e-58 201
MS.gene48528.t1 AT5G35450 33.136 338 211 6 3 333 1 330 1.80e-57 200
MS.gene48528.t1 AT5G35450 33.136 338 211 6 3 333 1 330 1.80e-57 200
MS.gene48528.t1 AT1G58848 34.195 348 210 8 3 340 1 339 1.84e-57 201
MS.gene48528.t1 AT1G59218 34.195 348 210 8 3 340 1 339 1.84e-57 201
MS.gene48528.t1 AT1G59218 34.195 348 210 8 3 340 1 339 1.84e-57 201
MS.gene48528.t1 AT1G59218 34.195 348 210 8 3 340 1 339 1.84e-57 201
MS.gene48528.t1 AT1G58848 34.195 348 210 8 3 340 1 339 1.84e-57 201
MS.gene48528.t1 AT1G58807 34.195 348 210 8 3 340 1 339 1.87e-57 201
MS.gene48528.t1 AT1G59124 34.195 348 210 8 3 340 1 339 1.87e-57 201
MS.gene48528.t1 AT1G58400 32.853 347 209 7 3 341 1 331 2.27e-57 200
MS.gene48528.t1 AT3G46530 34.302 344 212 5 3 336 1 340 3.56e-55 193
MS.gene48528.t1 AT1G58602 33.046 348 218 8 3 340 1 343 1.36e-52 187
MS.gene48528.t1 AT1G58602 33.046 348 218 8 3 340 1 343 1.36e-52 187
MS.gene48528.t1 AT3G46710 31.792 346 214 6 3 336 1 336 2.34e-47 171
MS.gene48528.t1 AT3G46730 33.140 344 217 6 3 336 1 341 6.99e-45 164
MS.gene48528.t1 AT1G59620 36.548 197 118 2 144 340 12 201 1.40e-38 146
MS.gene48528.t1 AT3G07040 28.011 357 231 5 3 338 1 352 1.79e-37 143
MS.gene48528.t1 AT1G10920 35.294 204 125 3 144 347 25 221 8.80e-37 140
MS.gene48528.t1 AT1G10920 35.294 204 125 3 144 347 25 221 8.80e-37 140
MS.gene48528.t1 AT1G10920 35.294 204 125 3 144 347 25 221 8.80e-37 140
MS.gene48528.t1 AT3G50950 28.611 360 211 12 3 340 1 336 6.93e-34 132
MS.gene48528.t1 AT3G50950 28.611 360 211 12 3 340 1 336 6.93e-34 132
MS.gene48528.t1 AT3G14470 24.922 321 213 10 33 336 39 348 5.54e-16 79.7
MS.gene48528.t1 AT3G14470 24.922 321 213 10 33 336 39 348 5.54e-16 79.7
MS.gene48528.t1 AT1G61310 21.829 339 222 10 11 335 15 324 2.76e-14 74.7
MS.gene48528.t1 AT1G61180 21.829 339 222 11 11 335 13 322 6.86e-14 73.2
MS.gene48528.t1 AT1G61180 21.829 339 222 11 11 335 13 322 8.64e-14 73.2
MS.gene48528.t1 AT1G61190 21.575 292 194 8 51 335 60 323 7.31e-13 70.1
MS.gene48528.t1 AT1G61190 21.575 292 194 8 51 335 60 323 8.08e-13 70.1
MS.gene48528.t1 AT1G61190 21.575 292 194 8 51 335 60 323 8.08e-13 70.1
MS.gene48528.t1 AT1G61190 21.575 292 194 8 51 335 60 323 1.17e-12 69.7
MS.gene48528.t1 AT1G61300 28.105 153 97 4 187 335 68 211 9.20e-12 66.6
MS.gene48528.t1 AT1G61300 28.105 153 97 4 187 335 68 211 9.24e-12 66.6
MS.gene48528.t1 AT5G63020 31.410 156 88 6 187 335 181 324 1.26e-11 66.2
MS.gene48528.t1 AT1G12220 28.000 150 101 3 187 335 62 205 3.52e-11 65.1
MS.gene48528.t1 AT1G12220 28.000 150 101 3 187 335 183 326 3.87e-11 65.1
MS.gene48528.t1 AT1G12220 28.000 150 101 3 187 335 183 326 3.87e-11 65.1
MS.gene48528.t1 AT5G43740 26.554 177 120 4 157 332 150 317 5.53e-11 64.3
MS.gene48528.t1 AT5G43740 26.554 177 120 4 157 332 150 317 5.53e-11 64.3

Find 64 sgRNAs with CRISPR-Local

Find 74 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATCTCATCTCTCTCTTCTT+TGG 0.233488 7.2:-82106803 None:intergenic
TCCTGAAAATGAAACTTTGA+TGG 0.348103 7.2:-82106332 None:intergenic
TGTCAAATGGTTTATATTTG+TGG 0.348236 7.2:+82106622 MS.gene48528:CDS
AGAGGATGCAATGCTTCTTA+AGG 0.349442 7.2:+82106206 MS.gene48528:CDS
AGGAGGGACAATAATGTTAA+TGG 0.362537 7.2:+82106072 None:intergenic
ATGGTTTATATTTGTGGAAT+GGG 0.374037 7.2:+82106628 MS.gene48528:CDS
ACCCTCAAAGTGTCGCCTAA+TGG 0.375718 7.2:-82106698 None:intergenic
TTTATCATTATAGTTCCATT+AGG 0.384537 7.2:+82106683 MS.gene48528:CDS
GAACATGAGAGATGAAGAAT+TGG 0.385700 7.2:+82106828 MS.gene48528:CDS
ATTTGTGGAATGGGCGGTCT+AGG 0.403035 7.2:+82106637 MS.gene48528:CDS
TTCCATTAGGCGACACTTTG+AGG 0.404936 7.2:+82106696 MS.gene48528:CDS
TCTTAAATGCAGAAGATAGT+TGG 0.410767 7.2:+82107046 MS.gene48528:CDS
GTGGTGAGACTATAAAGAAT+TGG 0.417078 7.2:+82106254 MS.gene48528:CDS
AAGAGGCCAGCTTGTTGAAT+GGG 0.421540 7.2:+82106146 MS.gene48528:CDS
ACAAGCTGGCCTCTTCAATC+AGG 0.424479 7.2:-82106138 None:intergenic
GAGGATGCAATGCTTCTTAA+GGG 0.431521 7.2:+82106207 MS.gene48528:CDS
ACATATGGAGCAACGATACT+TGG 0.439495 7.2:+82106905 MS.gene48528:CDS
TGGTTCATGAAGCAAGCCTT+TGG 0.449801 7.2:-82107019 None:intergenic
AATGGTTTATATTTGTGGAA+TGG 0.450612 7.2:+82106627 MS.gene48528:CDS
CTAAGGCATGATCACAAAGT+TGG 0.454604 7.2:+82106376 MS.gene48528:CDS
TGATCGTCTTGGATGACATA+TGG 0.454692 7.2:+82106890 MS.gene48528:CDS
TCCATTAGGCGACACTTTGA+GGG 0.456423 7.2:+82106697 MS.gene48528:CDS
GAAAATGTGTTTGATCGTCT+TGG 0.460719 7.2:+82106879 MS.gene48528:CDS
AAAGGCTTGCTTCATGAACC+AGG 0.462557 7.2:+82107021 MS.gene48528:CDS
AGCAATCCTTTCAATTGTAA+AGG 0.463880 7.2:-82106110 None:intergenic
TCAAGATCAACATTGTCAAA+TGG 0.464973 7.2:+82106609 MS.gene48528:CDS
TTACCCGGATCATCTTTAGT+TGG 0.467934 7.2:-82107093 None:intergenic
AAGAAGAGAGAGATGAGATT+AGG 0.469912 7.2:+82106806 MS.gene48528:CDS
GAAGAGGCCAGCTTGTTGAA+TGG 0.475789 7.2:+82106145 MS.gene48528:CDS
CTTAAATGCAGAAGATAGTT+GGG 0.477073 7.2:+82107047 MS.gene48528:CDS
AATTGCAAATTGAACTAAAG+AGG 0.489347 7.2:+82106188 MS.gene48528:CDS
TGACTCCTTTCTACAAACTA+AGG 0.493469 7.2:+82106359 MS.gene48528:CDS
ACAAGAAGTTTACAAACATA+CGG 0.508739 7.2:+82106439 MS.gene48528:CDS
ATGCAATAGAAGAGAGGTAT+GGG 0.516655 7.2:+82106747 MS.gene48528:CDS
GGTCACTGTAGGGTTGGATA+AGG 0.518449 7.2:+82106555 MS.gene48528:CDS
TTGTGTCCTTTACAATTGAA+AGG 0.519770 7.2:+82106104 MS.gene48528:CDS
TCATGCCTTAGTTTGTAGAA+AGG 0.530527 7.2:-82106364 None:intergenic
AATGCAATAGAAGAGAGGTA+TGG 0.537735 7.2:+82106746 MS.gene48528:CDS
TGAAGAGGTCACTGTAGGGT+TGG 0.544160 7.2:+82106549 MS.gene48528:CDS
GTGGTTGAAGAGGTCACTGT+AGG 0.545414 7.2:+82106544 MS.gene48528:CDS
GCTGAGAGAAAGCAGGATGA+AGG 0.545967 7.2:+82106232 MS.gene48528:CDS
TTATTCTCATGTGGTTGAAG+AGG 0.557129 7.2:+82106534 MS.gene48528:CDS
AATAGAAGAGAGGTATGGGA+GGG 0.562729 7.2:+82106751 MS.gene48528:CDS
TCTTCTGCATTTAAGAACCC+TGG 0.566027 7.2:-82107039 None:intergenic
TAAGGACATAAAGAAAGTTG+TGG 0.566647 7.2:+82106573 MS.gene48528:CDS
TTTCCAACTAAAGATGATCC+GGG 0.568370 7.2:+82107090 MS.gene48528:CDS
CATATGGAGCAACGATACTT+GGG 0.573306 7.2:+82106906 MS.gene48528:CDS
TGCTGACCTCCTGATTGAAG+AGG 0.577147 7.2:+82106129 MS.gene48528:CDS
ACATAAAGAAAGTTGTGGAA+TGG 0.578466 7.2:+82106578 MS.gene48528:CDS
AAGGGATGCTGAGAGAAAGC+AGG 0.597879 7.2:+82106225 MS.gene48528:CDS
AGCTGGCCTCTTCAATCAGG+AGG 0.599071 7.2:-82106135 None:intergenic
ACTTACCCCATTCAACAAGC+TGG 0.601963 7.2:-82106152 None:intergenic
AAAATTAGCTTATGATGCTG+AGG 0.613815 7.2:+82106291 MS.gene48528:CDS
CAATAGAAGAGAGGTATGGG+AGG 0.616974 7.2:+82106750 MS.gene48528:CDS
AGACACAGAGGCAATTGAGA+TGG 0.618493 7.2:+82106509 MS.gene48528:CDS
GAGATGGTCTTATTCTCATG+TGG 0.623407 7.2:+82106525 MS.gene48528:CDS
TCATCACATGTAGATTCCAA+AGG 0.630961 7.2:+82107003 MS.gene48528:CDS
TAAGATTCAAGTATATTACC+CGG 0.631586 7.2:-82107108 None:intergenic
AGAGGCCAGCTTGTTGAATG+GGG 0.639055 7.2:+82106147 MS.gene48528:CDS
TGGTTGAAGAGGTCACTGTA+GGG 0.647211 7.2:+82106545 MS.gene48528:CDS
GTTTATATTTGTGGAATGGG+CGG 0.648482 7.2:+82106631 MS.gene48528:CDS
AAGGCTTGCTTCATGAACCA+GGG 0.661283 7.2:+82107022 MS.gene48528:CDS
GAGAGAAAGCAGGATGAAGG+TGG 0.707454 7.2:+82106235 MS.gene48528:CDS
ACTTTGTGATTGAGACACAG+AGG 0.744846 7.2:+82106497 MS.gene48528:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAATACAAAGAGTAAGA+TGG + chr7.2:82106954-82106973 MS.gene48528:CDS 20.0%
!! TTTATCATTATAGTTCCATT+AGG + chr7.2:82106683-82106702 MS.gene48528:CDS 20.0%
!!! CAATTTGCAATTTTTTGATT+TGG - chr7.2:82106180-82106199 None:intergenic 20.0%
!!! TTACTCTTTGTATTTTTTGA+TGG - chr7.2:82106952-82106971 None:intergenic 20.0%
! AATGGTTTATATTTGTGGAA+TGG + chr7.2:82106627-82106646 MS.gene48528:CDS 25.0%
! AATTGCAAATTGAACTAAAG+AGG + chr7.2:82106188-82106207 MS.gene48528:CDS 25.0%
! ACAAGAAGTTTACAAACATA+CGG + chr7.2:82106439-82106458 MS.gene48528:CDS 25.0%
! ATGGTTTATATTTGTGGAAT+GGG + chr7.2:82106628-82106647 MS.gene48528:CDS 25.0%
! TAAGATTCAAGTATATTACC+CGG - chr7.2:82107111-82107130 None:intergenic 25.0%
! TGTCAAATGGTTTATATTTG+TGG + chr7.2:82106622-82106641 MS.gene48528:CDS 25.0%
!!! CTTTGTATTTTTTGATGGAA+AGG - chr7.2:82106947-82106966 None:intergenic 25.0%
ACATAAAGAAAGTTGTGGAA+TGG + chr7.2:82106578-82106597 MS.gene48528:CDS 30.0%
AGCAATCCTTTCAATTGTAA+AGG - chr7.2:82106113-82106132 None:intergenic 30.0%
CTTAAATGCAGAAGATAGTT+GGG + chr7.2:82107047-82107066 MS.gene48528:CDS 30.0%
TAAGGACATAAAGAAAGTTG+TGG + chr7.2:82106573-82106592 MS.gene48528:CDS 30.0%
TCAAAAATGCAATAGAAGAG+AGG + chr7.2:82106741-82106760 MS.gene48528:CDS 30.0%
TCAAGATCAACATTGTCAAA+TGG + chr7.2:82106609-82106628 MS.gene48528:CDS 30.0%
TCCTGAAAATGAAACTTTGA+TGG - chr7.2:82106335-82106354 None:intergenic 30.0%
TCTTAAATGCAGAAGATAGT+TGG + chr7.2:82107046-82107065 MS.gene48528:CDS 30.0%
TTGTGTCCTTTACAATTGAA+AGG + chr7.2:82106104-82106123 MS.gene48528:CDS 30.0%
! AAAATTAGCTTATGATGCTG+AGG + chr7.2:82106291-82106310 MS.gene48528:CDS 30.0%
! CAGCATCATAAGCTAATTTT+CGG - chr7.2:82106291-82106310 None:intergenic 30.0%
! TTTTCCAACTAAAGATGATC+CGG + chr7.2:82107089-82107108 MS.gene48528:CDS 30.0%
AAGAAGAGAGAGATGAGATT+AGG + chr7.2:82106806-82106825 MS.gene48528:CDS 35.0%
AATCTCATCTCTCTCTTCTT+TGG - chr7.2:82106806-82106825 None:intergenic 35.0%
AATGCAATAGAAGAGAGGTA+TGG + chr7.2:82106746-82106765 MS.gene48528:CDS 35.0%
GAAAATGTGTTTGATCGTCT+TGG + chr7.2:82106879-82106898 MS.gene48528:CDS 35.0%
GAACATGAGAGATGAAGAAT+TGG + chr7.2:82106828-82106847 MS.gene48528:CDS 35.0%
GTGGTGAGACTATAAAGAAT+TGG + chr7.2:82106254-82106273 MS.gene48528:CDS 35.0%
GTTTATATTTGTGGAATGGG+CGG + chr7.2:82106631-82106650 MS.gene48528:CDS 35.0%
TCATCACATGTAGATTCCAA+AGG + chr7.2:82107003-82107022 MS.gene48528:CDS 35.0%
TGACTCCTTTCTACAAACTA+AGG + chr7.2:82106359-82106378 MS.gene48528:CDS 35.0%
TTATTCTCATGTGGTTGAAG+AGG + chr7.2:82106534-82106553 MS.gene48528:CDS 35.0%
TTTCCAACTAAAGATGATCC+GGG + chr7.2:82107090-82107109 MS.gene48528:CDS 35.0%
! ATGCAATAGAAGAGAGGTAT+GGG + chr7.2:82106747-82106766 MS.gene48528:CDS 35.0%
! GCCATCAAAGTTTCATTTTC+AGG + chr7.2:82106331-82106350 MS.gene48528:CDS 35.0%
!! TCATGCCTTAGTTTGTAGAA+AGG - chr7.2:82106367-82106386 None:intergenic 35.0%
!!! GTATTTTTTGATGGAAAGGC+TGG - chr7.2:82106943-82106962 None:intergenic 35.0%
ACATATGGAGCAACGATACT+TGG + chr7.2:82106905-82106924 MS.gene48528:CDS 40.0%
ACTTTGTGATTGAGACACAG+AGG + chr7.2:82106497-82106516 MS.gene48528:CDS 40.0%
AGAGGATGCAATGCTTCTTA+AGG + chr7.2:82106206-82106225 MS.gene48528:CDS 40.0%
CATATGGAGCAACGATACTT+GGG + chr7.2:82106906-82106925 MS.gene48528:CDS 40.0%
CTAAGGCATGATCACAAAGT+TGG + chr7.2:82106376-82106395 MS.gene48528:CDS 40.0%
GAGGATGCAATGCTTCTTAA+GGG + chr7.2:82106207-82106226 MS.gene48528:CDS 40.0%
TCTTCTGCATTTAAGAACCC+TGG - chr7.2:82107042-82107061 None:intergenic 40.0%
TGATCGTCTTGGATGACATA+TGG + chr7.2:82106890-82106909 MS.gene48528:CDS 40.0%
TTACCCGGATCATCTTTAGT+TGG - chr7.2:82107096-82107115 None:intergenic 40.0%
! AATAGAAGAGAGGTATGGGA+GGG + chr7.2:82106751-82106770 MS.gene48528:CDS 40.0%
!! ACACTTTGAGGGTTTTGCTT+GGG + chr7.2:82106708-82106727 MS.gene48528:CDS 40.0%
!! GAGATGGTCTTATTCTCATG+TGG + chr7.2:82106525-82106544 MS.gene48528:CDS 40.0%
ACTTACCCCATTCAACAAGC+TGG - chr7.2:82106155-82106174 None:intergenic 45.0%
AGACACAGAGGCAATTGAGA+TGG + chr7.2:82106509-82106528 MS.gene48528:CDS 45.0%
TCCATTAGGCGACACTTTGA+GGG + chr7.2:82106697-82106716 MS.gene48528:CDS 45.0%
TGGTTCATGAAGCAAGCCTT+TGG - chr7.2:82107022-82107041 None:intergenic 45.0%
TGGTTGAAGAGGTCACTGTA+GGG + chr7.2:82106545-82106564 MS.gene48528:CDS 45.0%
TTCCATTAGGCGACACTTTG+AGG + chr7.2:82106696-82106715 MS.gene48528:CDS 45.0%
! AAAGGCTTGCTTCATGAACC+AGG + chr7.2:82107021-82107040 MS.gene48528:CDS 45.0%
! AAGGCTTGCTTCATGAACCA+GGG + chr7.2:82107022-82107041 MS.gene48528:CDS 45.0%
! CAATAGAAGAGAGGTATGGG+AGG + chr7.2:82106750-82106769 MS.gene48528:CDS 45.0%
!! AAGAGGCCAGCTTGTTGAAT+GGG + chr7.2:82106146-82106165 MS.gene48528:CDS 45.0%
!! GACACTTTGAGGGTTTTGCT+TGG + chr7.2:82106707-82106726 MS.gene48528:CDS 45.0%
AAGGGATGCTGAGAGAAAGC+AGG + chr7.2:82106225-82106244 MS.gene48528:CDS 50.0%
ATTTGTGGAATGGGCGGTCT+AGG + chr7.2:82106637-82106656 MS.gene48528:CDS 50.0%
GAGAGAAAGCAGGATGAAGG+TGG + chr7.2:82106235-82106254 MS.gene48528:CDS 50.0%
GCTGAGAGAAAGCAGGATGA+AGG + chr7.2:82106232-82106251 MS.gene48528:CDS 50.0%
GGTCACTGTAGGGTTGGATA+AGG + chr7.2:82106555-82106574 MS.gene48528:CDS 50.0%
GTGGTTGAAGAGGTCACTGT+AGG + chr7.2:82106544-82106563 MS.gene48528:CDS 50.0%
TGAAGAGGTCACTGTAGGGT+TGG + chr7.2:82106549-82106568 MS.gene48528:CDS 50.0%
TGCTGACCTCCTGATTGAAG+AGG + chr7.2:82106129-82106148 MS.gene48528:CDS 50.0%
! ACAAGCTGGCCTCTTCAATC+AGG - chr7.2:82106141-82106160 None:intergenic 50.0%
!! ACCCTCAAAGTGTCGCCTAA+TGG - chr7.2:82106701-82106720 None:intergenic 50.0%
!! AGAGGCCAGCTTGTTGAATG+GGG + chr7.2:82106147-82106166 MS.gene48528:CDS 50.0%
!! GAAGAGGCCAGCTTGTTGAA+TGG + chr7.2:82106145-82106164 MS.gene48528:CDS 50.0%
! AGCTGGCCTCTTCAATCAGG+AGG - chr7.2:82106138-82106157 None:intergenic 55.0%


Chromosome Type Strat End Strand Name
chr7.2 gene 82106085 82107131 82106085 ID=MS.gene48528
chr7.2 mRNA 82106085 82107131 82106085 ID=MS.gene48528.t1;Parent=MS.gene48528
chr7.2 exon 82106085 82107131 82106085 ID=MS.gene48528.t1.exon1;Parent=MS.gene48528.t1
chr7.2 CDS 82106085 82107131 82106085 ID=cds.MS.gene48528.t1;Parent=MS.gene48528.t1
Gene Sequence

>MS.gene48528

ATGTTAATGGTTGAGTCAGTTGTGTCCTTTACAATTGAAAGGATTGCTGACCTCCTGATTGAAGAGGCCAGCTTGTTGAATGGGGTAAGTGACCAAATCAAAAAATTGCAAATTGAACTAAAGAGGATGCAATGCTTCTTAAGGGATGCTGAGAGAAAGCAGGATGAAGGTGGTGAGACTATAAAGAATTGGATATCTGAGATCCGAAAATTAGCTTATGATGCTGAGGATGTGATTGAAACTTATGCCATCAAAGTTTCATTTTCAGGAGCAATGACTCCTTTCTACAAACTAAGGCATGATCACAAAGTTGGAAACAAGATTATATCTATTAATTCTCAAATAGCAGATCTTACAAGAAGTTTACAAACATACGGTTTGACTGCAACAACAAGAGACAATGAAGAATCACACTTTGTGATTGAGACACAGAGGCAATTGAGATGGTCTTATTCTCATGTGGTTGAAGAGGTCACTGTAGGGTTGGATAAGGACATAAAGAAAGTTGTGGAATGGCTACTAAATCAAGATCAACATTGTCAAATGGTTTATATTTGTGGAATGGGCGGTCTAGGTAAAACAACACTTGCTAAAAATGTTTATCATTATAGTTCCATTAGGCGACACTTTGAGGGTTTTGCTTGGGCATATATATCTCAAAAATGCAATAGAAGAGAGGTATGGGAGGGAATTTTACTTCAGCTTACTACTTCGTCTTCCAAAGAAGAGAGAGATGAGATTAGGAACATGAGAGATGAAGAATTGGCAAAAAAGTTGTACAAAGTTCAACAAGAGAAAATGTGTTTGATCGTCTTGGATGACATATGGAGCAACGATACTTGGGATATTTTAAGTCCAGCCTTTCCATCAAAAAATACAAAGAGTAAGATGGTTTTTACATCACGAAATAAAGCAGTCTCATCACATGTAGATTCCAAAGGCTTGCTTCATGAACCAGGGTTCTTAAATGCAGAAGATAGTTGGGCGTTGTTTCAGAAGAAAGCTTTTCCAACTAAAGATGATCCGGGTAATATACTTGAATCTTAA

Protein sequence

>MS.gene48528.t1

MLMVESVVSFTIERIADLLIEEASLLNGVSDQIKKLQIELKRMQCFLRDAERKQDEGGETIKNWISEIRKLAYDAEDVIETYAIKVSFSGAMTPFYKLRHDHKVGNKIISINSQIADLTRSLQTYGLTATTRDNEESHFVIETQRQLRWSYSHVVEEVTVGLDKDIKKVVEWLLNQDQHCQMVYICGMGGLGKTTLAKNVYHYSSIRRHFEGFAWAYISQKCNRREVWEGILLQLTTSSSKEERDEIRNMRDEELAKKLYKVQQEKMCLIVLDDIWSNDTWDILSPAFPSKNTKSKMVFTSRNKAVSSHVDSKGLLHEPGFLNAEDSWALFQKKAFPTKDDPGNILES