Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058708.t1 | XP_003624125.2 | 95.7 | 564 | 17 | 1 | 1 | 564 | 1 | 557 | 2.70E-301 | 1043.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058708.t1 | Q8L718 | 44.4 | 495 | 246 | 4 | 69 | 563 | 58 | 523 | 2.2e-110 | 401.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058708.t1 | G7KQL5 | 95.7 | 564 | 17 | 1 | 1 | 564 | 1 | 557 | 2.0e-301 | 1043.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050752 | MS.gene058708 | -0.80188 | 7.31E-49 | -1.69E-46 |
| MS.gene051003 | MS.gene058708 | -0.825565 | 4.37E-54 | -1.69E-46 |
| MS.gene051848 | MS.gene058708 | 0.803508 | 3.37E-49 | -1.69E-46 |
| MS.gene054403 | MS.gene058708 | -0.805659 | 1.20E-49 | -1.69E-46 |
| MS.gene055513 | MS.gene058708 | -0.801162 | 1.03E-48 | -1.69E-46 |
| MS.gene056776 | MS.gene058708 | -0.808515 | 2.98E-50 | -1.69E-46 |
| MS.gene058708 | MS.gene05985 | 0.800643 | 1.31E-48 | -1.69E-46 |
| MS.gene058708 | MS.gene059901 | 0.806365 | 8.52E-50 | -1.69E-46 |
| MS.gene058708 | MS.gene060932 | -0.81494 | 1.19E-51 | -1.69E-46 |
| MS.gene058708 | MS.gene061100 | -0.818112 | 2.32E-52 | -1.69E-46 |
| MS.gene058708 | MS.gene061707 | -0.805753 | 1.15E-49 | -1.69E-46 |
| MS.gene058708 | MS.gene064969 | -0.812122 | 4.97E-51 | -1.69E-46 |
| MS.gene058708 | MS.gene065460 | -0.80344 | 3.48E-49 | -1.69E-46 |
| MS.gene058708 | MS.gene066906 | 0.841326 | 5.09E-58 | -1.69E-46 |
| MS.gene058708 | MS.gene07339 | -0.802627 | 5.13E-49 | -1.69E-46 |
| MS.gene058708 | MS.gene073670 | -0.817209 | 3.71E-52 | -1.69E-46 |
| MS.gene058708 | MS.gene08470 | -0.830317 | 3.14E-55 | -1.69E-46 |
| MS.gene058708 | MS.gene08922 | -0.800575 | 1.35E-48 | -1.69E-46 |
| MS.gene058708 | MS.gene20886 | -0.819985 | 8.71E-53 | -1.69E-46 |
| MS.gene058708 | MS.gene22769 | 0.803711 | 3.06E-49 | -1.69E-46 |
| MS.gene058708 | MS.gene30479 | -0.81654 | 5.25E-52 | -1.69E-46 |
| MS.gene058708 | MS.gene31862 | -0.813908 | 2.02E-51 | -1.69E-46 |
| MS.gene058708 | MS.gene33177 | -0.803795 | 2.94E-49 | -1.69E-46 |
| MS.gene058708 | MS.gene35499 | -0.800557 | 1.36E-48 | -1.69E-46 |
| MS.gene058708 | MS.gene45374 | -0.818612 | 1.79E-52 | -1.69E-46 |
| MS.gene058708 | MS.gene48841 | -0.833753 | 4.45E-56 | -1.69E-46 |
| MS.gene058708 | MS.gene51184 | 0.946542 | 3.78E-105 | -1.69E-46 |
| MS.gene058708 | MS.gene51704 | -0.80349 | 3.40E-49 | -1.69E-46 |
| MS.gene058708 | MS.gene52592 | 0.80691 | 6.54E-50 | -1.69E-46 |
| MS.gene058708 | MS.gene53070 | -0.834564 | 2.79E-56 | -1.69E-46 |
| MS.gene058708 | MS.gene54377 | -0.813585 | 2.38E-51 | -1.69E-46 |
| MS.gene058708 | MS.gene54380 | -0.809664 | 1.69E-50 | -1.69E-46 |
| MS.gene058708 | MS.gene57783 | -0.801158 | 1.03E-48 | -1.69E-46 |
| MS.gene058708 | MS.gene58284 | -0.808781 | 2.62E-50 | -1.69E-46 |
| MS.gene058708 | MS.gene58486 | 0.833026 | 6.75E-56 | -1.69E-46 |
| MS.gene058708 | MS.gene59417 | -0.803775 | 2.97E-49 | -1.69E-46 |
| MS.gene058708 | MS.gene59539 | -0.81827 | 2.14E-52 | -1.69E-46 |
| MS.gene058708 | MS.gene68188 | -0.816789 | 4.61E-52 | -1.69E-46 |
| MS.gene058708 | MS.gene68653 | -0.802887 | 4.53E-49 | -1.69E-46 |
| MS.gene058708 | MS.gene68654 | -0.80858 | 2.89E-50 | -1.69E-46 |
| MS.gene058708 | MS.gene70154 | -0.804149 | 2.48E-49 | -1.69E-46 |
| MS.gene058708 | MS.gene70314 | -0.809641 | 1.71E-50 | -1.69E-46 |
| MS.gene058708 | MS.gene71945 | -0.803875 | 2.83E-49 | -1.69E-46 |
| MS.gene058708 | MS.gene71994 | -0.815894 | 7.32E-52 | -1.69E-46 |
| MS.gene058708 | MS.gene76635 | -0.83197 | 1.23E-55 | -1.69E-46 |
| MS.gene058708 | MS.gene79120 | -0.813967 | 1.96E-51 | -1.69E-46 |
| MS.gene058708 | MS.gene79599 | 0.802545 | 5.33E-49 | -1.69E-46 |
| MS.gene058708 | MS.gene82269 | -0.801853 | 7.40E-49 | -1.69E-46 |
| MS.gene058708 | MS.gene83473 | -0.803548 | 3.31E-49 | -1.69E-46 |
| MS.gene058708 | MS.gene95157 | 0.800433 | 1.44E-48 | -1.69E-46 |
| MS.gene058708 | MS.gene97030 | -0.802829 | 4.66E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058708.t1 | MTR_7g079500 | 95.745 | 564 | 17 | 1 | 1 | 564 | 1 | 557 | 0.0 | 1100 |
| MS.gene058708.t1 | MTR_4g107330 | 27.799 | 259 | 163 | 10 | 74 | 327 | 120 | 359 | 1.31e-16 | 82.8 |
| MS.gene058708.t1 | MTR_4g089105 | 25.617 | 324 | 200 | 11 | 76 | 390 | 104 | 395 | 9.27e-16 | 80.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058708.t1 | AT3G44370 | 46.358 | 453 | 221 | 5 | 101 | 553 | 123 | 553 | 1.69e-137 | 411 |
| MS.gene058708.t1 | AT1G65080 | 46.482 | 469 | 227 | 5 | 96 | 563 | 78 | 523 | 7.43e-131 | 392 |
| MS.gene058708.t1 | AT3G44370 | 45.309 | 437 | 217 | 5 | 117 | 553 | 13 | 427 | 7.45e-128 | 382 |
| MS.gene058708.t1 | AT2G46470 | 28.736 | 261 | 156 | 10 | 75 | 327 | 121 | 359 | 5.41e-16 | 80.9 |
| MS.gene058708.t1 | AT5G62050 | 25.667 | 300 | 198 | 11 | 40 | 327 | 70 | 356 | 3.24e-12 | 69.3 |
Find 132 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTGCAAAGTTGGGGTTAC+TGG | 0.210318 | 7.4:-26402285 | MS.gene058708:CDS |
| TATTGCAGGGTGGTGCTTTA+TGG | 0.216934 | 7.4:-26405207 | MS.gene058708:intron |
| TACAGCTCTTTACATGATTC+TGG | 0.217023 | 7.4:-26400253 | MS.gene058708:intron |
| TTCAATCATAGGTTTCTTAA+AGG | 0.218621 | 7.4:+26404417 | None:intergenic |
| TTTCATTAGCTTTCACTTGC+TGG | 0.236727 | 7.4:-26401394 | MS.gene058708:intron |
| TTCTAAAACACCGCCTTTAC+TGG | 0.237797 | 7.4:-26402222 | MS.gene058708:CDS |
| ACCAAAGCTCGCAAGTATTC+AGG | 0.244458 | 7.4:+26401743 | None:intergenic |
| GAGAAAATTCTGTTAAATTC+TGG | 0.264895 | 7.4:+26405182 | None:intergenic |
| ATCAGAGGTCTCTCCTACTT+TGG | 0.269333 | 7.4:+26400119 | None:intergenic |
| GAATCCTTTCACGATCTTAC+TGG | 0.269706 | 7.4:-26408964 | MS.gene058708:CDS |
| CTTTGAAAGAGTTGCAAATA+TGG | 0.275220 | 7.4:-26400423 | MS.gene058708:CDS |
| ACTTGTTCTTCTTTGTCCTT+TGG | 0.304662 | 7.4:-26408220 | MS.gene058708:CDS |
| TCTTCACTATGTTATTGTTC+AGG | 0.315846 | 7.4:-26405119 | MS.gene058708:intron |
| TCTGTTACCGTTTATTGTTC+AGG | 0.318587 | 7.4:-26407408 | MS.gene058708:intron |
| TCCTGTGTTTCTTCAATCAT+AGG | 0.321666 | 7.4:+26404406 | None:intergenic |
| CGTTTGCTAGCGGGATCTTC+AGG | 0.330108 | 7.4:+26400395 | None:intergenic |
| TGCAGGGGAGCCAACTCTAT+TGG | 0.352062 | 7.4:-26402743 | MS.gene058708:intron |
| CCGGCTGCCCTTGCAAAGTT+GGG | 0.353729 | 7.4:-26402293 | MS.gene058708:CDS |
| GCACATGATACTCACATTTA+GGG | 0.357382 | 7.4:+26408157 | None:intergenic |
| TTATCGCTACTATTTAGAAA+TGG | 0.359283 | 7.4:+26401964 | None:intergenic |
| GAGAGTGAGGTGTGAAAGGA+TGG | 0.365807 | 7.4:+26409175 | None:intergenic |
| CCCTGAATACTTGCGAGCTT+TGG | 0.367101 | 7.4:-26401744 | MS.gene058708:CDS |
| TAGTTCATTAACGCTAGTTC+AGG | 0.372738 | 7.4:-26402712 | MS.gene058708:intron |
| ATGGTTTGCTGCTGCTTGCC+AGG | 0.374798 | 7.4:-26400361 | MS.gene058708:intron |
| AACTAGCGTTAATGAACTAT+TGG | 0.375640 | 7.4:+26402716 | None:intergenic |
| AACTATAATTTCGTCTACTT+TGG | 0.379950 | 7.4:-26408250 | MS.gene058708:CDS |
| GAGAAAGGCGGTGGGAATGG+AGG | 0.385786 | 7.4:+26407509 | None:intergenic |
| GTCAGTATCCGGTTCGTTGT+TGG | 0.389209 | 7.4:+26409098 | None:intergenic |
| GGTGTGAAAGGATGGGGAAA+TGG | 0.401260 | 7.4:+26409183 | None:intergenic |
| CCATTCCCACCGCCTTTCTC+AGG | 0.403627 | 7.4:-26407506 | MS.gene058708:CDS |
| TCGTGTGGATGTTTAGCATA+AGG | 0.406304 | 7.4:-26405777 | MS.gene058708:CDS |
| CTCTGGATTCACCTGAGAAA+TGG | 0.408648 | 7.4:-26402139 | MS.gene058708:CDS |
| TATCGCTACTATTTAGAAAT+GGG | 0.409486 | 7.4:+26401965 | None:intergenic |
| GAAAAGCCAATGAAAGCTAT+AGG | 0.414505 | 7.4:+26404097 | None:intergenic |
| TTTGATTCTTTCATCCCAAT+GGG | 0.420061 | 7.4:-26401341 | MS.gene058708:CDS |
| TCAGAGGTCTCTCCTACTTT+GGG | 0.421098 | 7.4:+26400120 | None:intergenic |
| TCTAAAACACCGCCTTTACT+GGG | 0.421619 | 7.4:-26402221 | MS.gene058708:CDS |
| TCAAACTCTTCTGGATCAGT+TGG | 0.423716 | 7.4:+26401367 | None:intergenic |
| AATGAAATGACGGCACGAAC+GGG | 0.425578 | 7.4:+26408991 | None:intergenic |
| TCCGGCTGCCCTTGCAAAGT+TGG | 0.426350 | 7.4:-26402294 | MS.gene058708:CDS |
| TTCAGGAGAAATAGTTTCCT+TGG | 0.432614 | 7.4:+26402169 | None:intergenic |
| GAAAGGCGGTGGGAATGGAG+GGG | 0.435640 | 7.4:+26407511 | None:intergenic |
| ACATTGCCTATAGCTTTCAT+TGG | 0.436523 | 7.4:-26404103 | MS.gene058708:CDS |
| GGATGGGGAAATGGAGAAGG+GGG | 0.437314 | 7.4:+26409192 | None:intergenic |
| GCACTTTGCTCTTAGAAATC+CGG | 0.441029 | 7.4:-26402312 | MS.gene058708:CDS |
| ACAGAGGACATGTTCTCTAT+AGG | 0.442064 | 7.4:+26402107 | None:intergenic |
| AAAGGCGGTGGGAATGGAGG+GGG | 0.442947 | 7.4:+26407512 | None:intergenic |
| CACACACGTGCTTTCTCCAC+TGG | 0.444127 | 7.4:-26409126 | MS.gene058708:CDS |
| GTAGGAGAGTGAGGTGTGAA+AGG | 0.444282 | 7.4:+26409171 | None:intergenic |
| TTCTCCTGAAAAGAACCCTC+TGG | 0.446877 | 7.4:-26402156 | MS.gene058708:CDS |
| TTTACATGATTCTGGACAAA+AGG | 0.448616 | 7.4:-26400245 | MS.gene058708:CDS |
| TTCTGCATGGCAGGGAAAGA+AGG | 0.449768 | 7.4:-26400462 | MS.gene058708:intron |
| TGTGTCACCTGAACAATAAA+CGG | 0.452001 | 7.4:+26407401 | None:intergenic |
| CCCAACTTTGCAAGGGCAGC+CGG | 0.456125 | 7.4:+26402293 | None:intergenic |
| AACAGAGGCCACGCGTATGA+AGG | 0.456666 | 7.4:+26407425 | None:intergenic |
| AGAAAGGCGGTGGGAATGGA+GGG | 0.460344 | 7.4:+26407510 | None:intergenic |
| AAAGGCAATACCAGCCCATT+GGG | 0.461843 | 7.4:+26401327 | None:intergenic |
| AGACCTAACGAGTCAGTATC+CGG | 0.464023 | 7.4:+26409087 | None:intergenic |
| TTTAGAAGCATCAGTTTCCT+TGG | 0.464612 | 7.4:+26402238 | None:intergenic |
| AAGGTCGTGAATGGCGGAGA+AGG | 0.465191 | 7.4:+26409253 | None:intergenic |
| TTCAGAATCTCAGAGTGAAC+CGG | 0.471184 | 7.4:+26409057 | None:intergenic |
| CTCTTTCCTGAGAAAGGCGG+TGG | 0.471632 | 7.4:+26407500 | None:intergenic |
| AAATAATAGCGTTTGCTAGC+GGG | 0.477479 | 7.4:+26400386 | None:intergenic |
| CCAAAGCTCGCAAGTATTCA+GGG | 0.479493 | 7.4:+26401744 | None:intergenic |
| GAGTGAGGTGTGAAAGGATG+GGG | 0.479912 | 7.4:+26409177 | None:intergenic |
| TGGCTCTTCCAACAACGAAC+CGG | 0.482250 | 7.4:-26409106 | MS.gene058708:CDS |
| CCTGAGAAAGGCGGTGGGAA+TGG | 0.482544 | 7.4:+26407506 | None:intergenic |
| GCAGTACTACAAGCGATACT+TGG | 0.487468 | 7.4:-26404134 | MS.gene058708:intron |
| AAAGCAGAGGTAGGAGAGTG+AGG | 0.497731 | 7.4:+26409162 | None:intergenic |
| AGGATGGGGAAATGGAGAAG+GGG | 0.499317 | 7.4:+26409191 | None:intergenic |
| AAAGGATGGGGAAATGGAGA+AGG | 0.501975 | 7.4:+26409189 | None:intergenic |
| TGAAGACCAGCCATCAGAAA+AGG | 0.502911 | 7.4:+26405136 | None:intergenic |
| ATTCTTTCATCCCAATGGGC+TGG | 0.503593 | 7.4:-26401337 | MS.gene058708:CDS |
| TAGCATAAGGAGGATGTCAC+TGG | 0.507595 | 7.4:-26405764 | MS.gene058708:CDS |
| TGGTATTGCCTTTGAACGAC+AGG | 0.508364 | 7.4:-26401317 | MS.gene058708:intron |
| ATATAACTCTTTCCTGAGAA+AGG | 0.513710 | 7.4:+26407494 | None:intergenic |
| CCAGTAACCCCAACTTTGCA+AGG | 0.514235 | 7.4:+26402285 | None:intergenic |
| AAGGATGGGGAAATGGAGAA+GGG | 0.515103 | 7.4:+26409190 | None:intergenic |
| ATACAGATTAGCACTTGATA+AGG | 0.516704 | 7.4:-26401768 | MS.gene058708:intron |
| CAAAGGCAATACCAGCCCAT+TGG | 0.522360 | 7.4:+26401326 | None:intergenic |
| GAACCGGATACTGACTCGTT+AGG | 0.522380 | 7.4:-26409090 | MS.gene058708:CDS |
| GAAGAGAAGAGAAAAGCAGT+TGG | 0.524530 | 7.4:-26407452 | MS.gene058708:CDS |
| GAGAAGTTTGGATACGTGAC+AGG | 0.525922 | 7.4:+26409217 | None:intergenic |
| CAATGAAATGACGGCACGAA+CGG | 0.527263 | 7.4:+26408990 | None:intergenic |
| CAAACTCTTCTGGATCAGTT+GGG | 0.547306 | 7.4:+26401368 | None:intergenic |
| AAGGGAGCGGAGCGCCGCCG+TGG | 0.547423 | 7.4:+26409272 | None:intergenic |
| TCGTCAAATAGCAGCTTCCA+AGG | 0.548353 | 7.4:-26402255 | MS.gene058708:CDS |
| TCACTTCACCTGTCGTTCAA+AGG | 0.549805 | 7.4:+26401309 | None:intergenic |
| AAAACAATCGCTGATAGTGC+AGG | 0.550855 | 7.4:-26409036 | MS.gene058708:CDS |
| AGAGTGAGGTGTGAAAGGAT+GGG | 0.552625 | 7.4:+26409176 | None:intergenic |
| CTCGTTAGGTCTCGACTCGC+CGG | 0.554878 | 7.4:-26409076 | MS.gene058708:CDS |
| ATGTCACTGGATGGTCACCC+TGG | 0.556874 | 7.4:-26405751 | MS.gene058708:CDS |
| GAAGTGAAGAAGGTCGTGAA+TGG | 0.559596 | 7.4:+26409244 | None:intergenic |
| GTGAATGGCGGAGAAGGGAG+CGG | 0.567846 | 7.4:+26409259 | None:intergenic |
| ACGATCTTACTGGATTTCCA+TGG | 0.568273 | 7.4:-26408954 | MS.gene058708:intron |
| CGGCTGCCCTTGCAAAGTTG+GGG | 0.568863 | 7.4:-26402292 | MS.gene058708:CDS |
| AGGTCGTGAATGGCGGAGAA+GGG | 0.572019 | 7.4:+26409254 | None:intergenic |
| CTTTGAGCGTGCAATATCAA+AGG | 0.572614 | 7.4:-26401666 | MS.gene058708:intron |
| ACAGAGGCCACGCGTATGAA+GGG | 0.572665 | 7.4:+26407426 | None:intergenic |
| GACAGGTAGAGAAGTGAAGA+AGG | 0.573250 | 7.4:+26409234 | None:intergenic |
| AGAATAACTTACTTTAGCAA+AGG | 0.577211 | 7.4:+26401928 | None:intergenic |
| CTAGTGATCTTGCCCAAAGT+AGG | 0.578319 | 7.4:-26400132 | MS.gene058708:CDS |
| TTCGTTGTTGGAAGAGCCAG+TGG | 0.578885 | 7.4:+26409110 | None:intergenic |
| TATTGGTAATCCAATAGAGT+TGG | 0.582552 | 7.4:+26402733 | None:intergenic |
| AAATCCAGTAAGATCGTGAA+AGG | 0.588677 | 7.4:+26408960 | None:intergenic |
| GCGTCGAGAAAAGCAGAGGT+AGG | 0.597258 | 7.4:+26409153 | None:intergenic |
| TCCGCCGTCAATGGCAACCA+CGG | 0.597430 | 7.4:-26409289 | None:intergenic |
| ACCTATGATTGAAGAAACAC+AGG | 0.599445 | 7.4:-26404407 | MS.gene058708:CDS |
| TTGGATGCCCTTCATACGCG+TGG | 0.607722 | 7.4:-26407433 | MS.gene058708:CDS |
| TGAAAGAGTTGCAAATATGG+AGG | 0.608553 | 7.4:-26400420 | MS.gene058708:CDS |
| GGATTCGAGCAATGAAATGA+CGG | 0.609500 | 7.4:+26408981 | None:intergenic |
| CTAAAACACCGCCTTTACTG+GGG | 0.609566 | 7.4:-26402220 | MS.gene058708:CDS |
| TAAAACACCGCCTTTACTGG+GGG | 0.609921 | 7.4:-26402219 | MS.gene058708:CDS |
| GTGAAGAAGGTCGTGAATGG+CGG | 0.623350 | 7.4:+26409247 | None:intergenic |
| TGTGGATGTTTAGCATAAGG+AGG | 0.625186 | 7.4:-26405774 | MS.gene058708:CDS |
| ATTTCTCAGGTGAATCCAGA+GGG | 0.628396 | 7.4:+26402141 | None:intergenic |
| AGCCTTACACAATCAAAACC+AGG | 0.631417 | 7.4:+26405733 | None:intergenic |
| AAAATAATAGCGTTTGCTAG+CGG | 0.631693 | 7.4:+26400385 | None:intergenic |
| TAGCACAACAGCAGCTACCA+AGG | 0.646137 | 7.4:-26402186 | MS.gene058708:CDS |
| CATTTCTCAGGTGAATCCAG+AGG | 0.648928 | 7.4:+26402140 | None:intergenic |
| CAGTAACCCCAACTTTGCAA+GGG | 0.649154 | 7.4:+26402286 | None:intergenic |
| GCCTTACACAATCAAAACCA+GGG | 0.659867 | 7.4:+26405734 | None:intergenic |
| ATAAGGAGGATGTCACTGGA+TGG | 0.661619 | 7.4:-26405760 | MS.gene058708:CDS |
| ACTCTTCTGGATCAGTTGGG+AGG | 0.664251 | 7.4:+26401371 | None:intergenic |
| CAGTGGAGAAAGCACGTGTG+TGG | 0.666279 | 7.4:+26409127 | None:intergenic |
| TCTTTCCTGAGAAAGGCGGT+GGG | 0.676220 | 7.4:+26407501 | None:intergenic |
| GCCGTCAATGGCAACCACGG+CGG | 0.685166 | 7.4:-26409286 | None:intergenic |
| CACAGTGGTCAGTTCTACAG+AGG | 0.694925 | 7.4:+26402091 | None:intergenic |
| AGAGTTATATACGTCAGATG+CGG | 0.699233 | 7.4:-26407481 | MS.gene058708:CDS |
| TAACTCTTTCCTGAGAAAGG+CGG | 0.699719 | 7.4:+26407497 | None:intergenic |
| GAACGCGTCGAGAAAAGCAG+AGG | 0.699841 | 7.4:+26409149 | None:intergenic |
| TGAACAATAAACGGTAACAG+AGG | 0.705831 | 7.4:+26407410 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 26400120 | 26409301 | 26400120 | ID=MS.gene058708 |
| chr7.4 | mRNA | 26400120 | 26409301 | 26400120 | ID=MS.gene058708.t1;Parent=MS.gene058708 |
| chr7.4 | exon | 26408955 | 26409301 | 26408955 | ID=MS.gene058708.t1.exon1;Parent=MS.gene058708.t1 |
| chr7.4 | CDS | 26408955 | 26409301 | 26408955 | ID=cds.MS.gene058708.t1;Parent=MS.gene058708.t1 |
| chr7.4 | exon | 26408172 | 26408278 | 26408172 | ID=MS.gene058708.t1.exon2;Parent=MS.gene058708.t1 |
| chr7.4 | CDS | 26408172 | 26408278 | 26408172 | ID=cds.MS.gene058708.t1;Parent=MS.gene058708.t1 |
| chr7.4 | exon | 26407409 | 26407536 | 26407409 | ID=MS.gene058708.t1.exon3;Parent=MS.gene058708.t1 |
| chr7.4 | CDS | 26407409 | 26407536 | 26407409 | ID=cds.MS.gene058708.t1;Parent=MS.gene058708.t1 |
| chr7.4 | exon | 26405741 | 26405812 | 26405741 | ID=MS.gene058708.t1.exon4;Parent=MS.gene058708.t1 |
| chr7.4 | CDS | 26405741 | 26405812 | 26405741 | ID=cds.MS.gene058708.t1;Parent=MS.gene058708.t1 |
| chr7.4 | exon | 26405120 | 26405221 | 26405120 | ID=MS.gene058708.t1.exon5;Parent=MS.gene058708.t1 |
| chr7.4 | CDS | 26405120 | 26405221 | 26405120 | ID=cds.MS.gene058708.t1;Parent=MS.gene058708.t1 |
| chr7.4 | exon | 26404384 | 26404443 | 26404384 | ID=MS.gene058708.t1.exon6;Parent=MS.gene058708.t1 |
| chr7.4 | CDS | 26404384 | 26404443 | 26404384 | ID=cds.MS.gene058708.t1;Parent=MS.gene058708.t1 |
| chr7.4 | exon | 26404087 | 26404152 | 26404087 | ID=MS.gene058708.t1.exon7;Parent=MS.gene058708.t1 |
| chr7.4 | CDS | 26404087 | 26404152 | 26404087 | ID=cds.MS.gene058708.t1;Parent=MS.gene058708.t1 |
| chr7.4 | exon | 26402713 | 26402760 | 26402713 | ID=MS.gene058708.t1.exon8;Parent=MS.gene058708.t1 |
| chr7.4 | CDS | 26402713 | 26402760 | 26402713 | ID=cds.MS.gene058708.t1;Parent=MS.gene058708.t1 |
| chr7.4 | exon | 26402094 | 26402333 | 26402094 | ID=MS.gene058708.t1.exon9;Parent=MS.gene058708.t1 |
| chr7.4 | CDS | 26402094 | 26402333 | 26402094 | ID=cds.MS.gene058708.t1;Parent=MS.gene058708.t1 |
| chr7.4 | exon | 26401940 | 26401995 | 26401940 | ID=MS.gene058708.t1.exon10;Parent=MS.gene058708.t1 |
| chr7.4 | CDS | 26401940 | 26401995 | 26401940 | ID=cds.MS.gene058708.t1;Parent=MS.gene058708.t1 |
| chr7.4 | exon | 26401667 | 26401784 | 26401667 | ID=MS.gene058708.t1.exon11;Parent=MS.gene058708.t1 |
| chr7.4 | CDS | 26401667 | 26401784 | 26401667 | ID=cds.MS.gene058708.t1;Parent=MS.gene058708.t1 |
| chr7.4 | exon | 26401318 | 26401407 | 26401318 | ID=MS.gene058708.t1.exon12;Parent=MS.gene058708.t1 |
| chr7.4 | CDS | 26401318 | 26401407 | 26401318 | ID=cds.MS.gene058708.t1;Parent=MS.gene058708.t1 |
| chr7.4 | exon | 26400362 | 26400471 | 26400362 | ID=MS.gene058708.t1.exon13;Parent=MS.gene058708.t1 |
| chr7.4 | CDS | 26400362 | 26400471 | 26400362 | ID=cds.MS.gene058708.t1;Parent=MS.gene058708.t1 |
| chr7.4 | exon | 26400120 | 26400270 | 26400120 | ID=MS.gene058708.t1.exon14;Parent=MS.gene058708.t1 |
| chr7.4 | CDS | 26400120 | 26400270 | 26400120 | ID=cds.MS.gene058708.t1;Parent=MS.gene058708.t1 |
| Gene Sequence |
| Protein sequence |
