Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22464.t1 | XP_003625583.1 | 93 | 611 | 42 | 1 | 1 | 611 | 1 | 610 | 1.60E-230 | 808.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22464.t1 | Q9ZQC5 | 36.2 | 625 | 339 | 7 | 1 | 609 | 1 | 581 | 2.4e-57 | 224.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22464.t1 | G7L1R0 | 93.0 | 611 | 42 | 1 | 1 | 611 | 1 | 610 | 1.2e-230 | 808.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049418 | MS.gene22464 | 0.847533 | 1.09E-59 | -1.69E-46 |
| MS.gene049660 | MS.gene22464 | 0.817901 | 2.59E-52 | -1.69E-46 |
| MS.gene049697 | MS.gene22464 | 0.823118 | 1.65E-53 | -1.69E-46 |
| MS.gene04985 | MS.gene22464 | 0.812079 | 5.08E-51 | -1.69E-46 |
| MS.gene049989 | MS.gene22464 | 0.893017 | 9.29E-75 | -1.69E-46 |
| MS.gene050297 | MS.gene22464 | 0.840785 | 7.06E-58 | -1.69E-46 |
| MS.gene050310 | MS.gene22464 | 0.802657 | 5.06E-49 | -1.69E-46 |
| MS.gene05054 | MS.gene22464 | 0.817402 | 3.36E-52 | -1.69E-46 |
| MS.gene050648 | MS.gene22464 | 0.824479 | 7.89E-54 | -1.69E-46 |
| MS.gene051067 | MS.gene22464 | 0.804842 | 1.78E-49 | -1.69E-46 |
| MS.gene051094 | MS.gene22464 | 0.813454 | 2.54E-51 | -1.69E-46 |
| MS.gene051263 | MS.gene22464 | 0.832517 | 9.03E-56 | -1.69E-46 |
| MS.gene051423 | MS.gene22464 | 0.813288 | 2.76E-51 | -1.69E-46 |
| MS.gene051478 | MS.gene22464 | 0.807108 | 5.94E-50 | -1.69E-46 |
| MS.gene051629 | MS.gene22464 | 0.856768 | 2.57E-62 | -1.69E-46 |
| MS.gene051816 | MS.gene22464 | 0.838487 | 2.79E-57 | -1.69E-46 |
| MS.gene051955 | MS.gene22464 | 0.801419 | 9.09E-49 | -1.69E-46 |
| MS.gene052367 | MS.gene22464 | 0.840054 | 1.10E-57 | -1.69E-46 |
| MS.gene053348 | MS.gene22464 | 0.830861 | 2.31E-55 | -1.69E-46 |
| MS.gene053416 | MS.gene22464 | 0.858706 | 6.85E-63 | -1.69E-46 |
| MS.gene053417 | MS.gene22464 | 0.861651 | 8.83E-64 | -1.69E-46 |
| MS.gene053929 | MS.gene22464 | 0.823535 | 1.31E-53 | -1.69E-46 |
| MS.gene054551 | MS.gene22464 | 0.806185 | 9.30E-50 | -1.69E-46 |
| MS.gene054593 | MS.gene22464 | 0.800275 | 1.56E-48 | -1.69E-46 |
| MS.gene055308 | MS.gene22464 | 0.810527 | 1.10E-50 | -1.69E-46 |
| MS.gene055957 | MS.gene22464 | 0.842342 | 2.74E-58 | -1.69E-46 |
| MS.gene056041 | MS.gene22464 | 0.861472 | 1.00E-63 | -1.69E-46 |
| MS.gene056042 | MS.gene22464 | 0.849048 | 4.15E-60 | -1.69E-46 |
| MS.gene056169 | MS.gene22464 | 0.801626 | 8.24E-49 | -1.69E-46 |
| MS.gene056228 | MS.gene22464 | 0.87068 | 1.22E-66 | -1.69E-46 |
| MS.gene05640 | MS.gene22464 | 0.802549 | 5.32E-49 | -1.69E-46 |
| MS.gene056526 | MS.gene22464 | 0.863673 | 2.10E-64 | -1.69E-46 |
| MS.gene056528 | MS.gene22464 | 0.812281 | 4.59E-51 | -1.69E-46 |
| MS.gene057458 | MS.gene22464 | 0.802459 | 5.55E-49 | -1.69E-46 |
| MS.gene058196 | MS.gene22464 | 0.84402 | 9.79E-59 | -1.69E-46 |
| MS.gene058197 | MS.gene22464 | 0.868088 | 8.46E-66 | -1.69E-46 |
| MS.gene058198 | MS.gene22464 | 0.865028 | 7.95E-65 | -1.69E-46 |
| MS.gene058827 | MS.gene22464 | 0.83241 | 9.60E-56 | -1.69E-46 |
| MS.gene058828 | MS.gene22464 | 0.808677 | 2.75E-50 | -1.69E-46 |
| MS.gene059300 | MS.gene22464 | 0.890384 | 1.03E-73 | -1.69E-46 |
| MS.gene059553 | MS.gene22464 | 0.826934 | 2.07E-54 | -1.69E-46 |
| MS.gene060473 | MS.gene22464 | 0.869883 | 2.22E-66 | -1.69E-46 |
| MS.gene060492 | MS.gene22464 | 0.806209 | 9.19E-50 | -1.69E-46 |
| MS.gene060565 | MS.gene22464 | 0.857671 | 1.39E-62 | -1.69E-46 |
| MS.gene06057 | MS.gene22464 | 0.858437 | 8.24E-63 | -1.69E-46 |
| MS.gene06093 | MS.gene22464 | 0.820419 | 6.93E-53 | -1.69E-46 |
| MS.gene061099 | MS.gene22464 | 0.823748 | 1.17E-53 | -1.69E-46 |
| MS.gene061260 | MS.gene22464 | 0.836373 | 9.72E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene31961 | MS.gene22464 | PPI |
| MS.gene93135 | MS.gene22464 | PPI |
| MS.gene54155 | MS.gene22464 | PPI |
| MS.gene39455 | MS.gene22464 | PPI |
| MS.gene015702 | MS.gene22464 | PPI |
| MS.gene029217 | MS.gene22464 | PPI |
| MS.gene23912 | MS.gene22464 | PPI |
| MS.gene065074 | MS.gene22464 | PPI |
| MS.gene22464 | MS.gene064148 | PPI |
| MS.gene037356 | MS.gene22464 | PPI |
| MS.gene68625 | MS.gene22464 | PPI |
| MS.gene39229 | MS.gene22464 | PPI |
| MS.gene50208 | MS.gene22464 | PPI |
| MS.gene034650 | MS.gene22464 | PPI |
| MS.gene063692 | MS.gene22464 | PPI |
| MS.gene33795 | MS.gene22464 | PPI |
| MS.gene008635 | MS.gene22464 | PPI |
| MS.gene05775 | MS.gene22464 | PPI |
| MS.gene03912 | MS.gene22464 | PPI |
| MS.gene048551 | MS.gene22464 | PPI |
| MS.gene029219 | MS.gene22464 | PPI |
| MS.gene22464 | MS.gene56986 | PPI |
| MS.gene26785 | MS.gene22464 | PPI |
| MS.gene020474 | MS.gene22464 | PPI |
| MS.gene57038 | MS.gene22464 | PPI |
| MS.gene22464 | MS.gene76250 | PPI |
| MS.gene009801 | MS.gene22464 | PPI |
| MS.gene31930 | MS.gene22464 | PPI |
| MS.gene030154 | MS.gene22464 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22464.t1 | MTR_7g100730 | 95.090 | 611 | 29 | 1 | 1 | 611 | 1 | 610 | 0.0 | 1066 |
| MS.gene22464.t1 | MTR_1g066850 | 61.156 | 623 | 193 | 7 | 1 | 611 | 1 | 586 | 0.0 | 638 |
| MS.gene22464.t1 | MTR_7g061150 | 95.604 | 364 | 15 | 1 | 248 | 611 | 1 | 363 | 0.0 | 636 |
| MS.gene22464.t1 | MTR_4g461060 | 44.833 | 629 | 314 | 7 | 1 | 608 | 1 | 617 | 1.93e-145 | 435 |
| MS.gene22464.t1 | MTR_4g461060 | 46.021 | 578 | 283 | 5 | 51 | 608 | 46 | 614 | 2.62e-142 | 427 |
| MS.gene22464.t1 | MTR_2g093260 | 41.232 | 422 | 218 | 9 | 195 | 608 | 83 | 482 | 1.54e-70 | 236 |
| MS.gene22464.t1 | MTR_2g093240 | 42.857 | 112 | 30 | 2 | 499 | 610 | 3 | 80 | 2.10e-17 | 77.8 |
| MS.gene22464.t1 | MTR_2g093250 | 45.098 | 102 | 52 | 2 | 309 | 410 | 112 | 209 | 2.89e-14 | 73.2 |
| MS.gene22464.t1 | MTR_5g007350 | 28.107 | 338 | 178 | 12 | 3 | 305 | 22 | 329 | 3.20e-12 | 70.1 |
| MS.gene22464.t1 | MTR_4g478190 | 27.124 | 306 | 193 | 11 | 11 | 290 | 11 | 312 | 5.40e-11 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22464.t1 | AT2G37080 | 48.418 | 632 | 252 | 14 | 1 | 610 | 1 | 580 | 9.50e-161 | 473 |
| MS.gene22464.t1 | AT2G37080 | 48.265 | 634 | 252 | 15 | 1 | 610 | 1 | 582 | 7.24e-159 | 468 |
| MS.gene22464.t1 | AT2G37080 | 48.265 | 634 | 252 | 15 | 1 | 610 | 1 | 582 | 7.24e-159 | 468 |
| MS.gene22464.t1 | AT5G60210 | 39.448 | 616 | 310 | 10 | 1 | 608 | 1 | 561 | 5.47e-108 | 336 |
| MS.gene22464.t1 | AT5G60210 | 39.448 | 616 | 310 | 10 | 1 | 608 | 1 | 561 | 5.47e-108 | 336 |
| MS.gene22464.t1 | AT5G60210 | 39.448 | 616 | 310 | 10 | 1 | 608 | 1 | 561 | 5.47e-108 | 336 |
| MS.gene22464.t1 | AT5G60210 | 39.448 | 616 | 310 | 10 | 1 | 608 | 1 | 561 | 5.47e-108 | 336 |
| MS.gene22464.t1 | AT5G60210 | 38.789 | 611 | 311 | 10 | 6 | 608 | 30 | 585 | 4.50e-104 | 327 |
| MS.gene22464.t1 | AT5G60210 | 38.789 | 611 | 311 | 10 | 6 | 608 | 30 | 585 | 4.50e-104 | 327 |
| MS.gene22464.t1 | AT3G53350 | 38.655 | 357 | 171 | 15 | 1 | 336 | 1 | 330 | 8.43e-46 | 167 |
| MS.gene22464.t1 | AT3G53350 | 36.415 | 357 | 103 | 12 | 261 | 610 | 154 | 393 | 6.91e-36 | 139 |
| MS.gene22464.t1 | AT3G53350 | 38.655 | 357 | 171 | 15 | 1 | 336 | 1 | 330 | 8.43e-46 | 167 |
| MS.gene22464.t1 | AT3G53350 | 36.415 | 357 | 103 | 12 | 261 | 610 | 154 | 393 | 6.91e-36 | 139 |
| MS.gene22464.t1 | AT3G53350 | 38.440 | 359 | 171 | 16 | 1 | 336 | 1 | 332 | 6.47e-44 | 162 |
| MS.gene22464.t1 | AT3G53350 | 32.704 | 477 | 182 | 15 | 145 | 610 | 47 | 395 | 2.78e-36 | 140 |
| MS.gene22464.t1 | AT3G53350 | 38.440 | 359 | 171 | 16 | 1 | 336 | 1 | 332 | 6.47e-44 | 162 |
| MS.gene22464.t1 | AT3G53350 | 32.704 | 477 | 182 | 15 | 145 | 610 | 47 | 395 | 2.78e-36 | 140 |
| MS.gene22464.t1 | AT3G53350 | 38.440 | 359 | 171 | 16 | 1 | 336 | 1 | 332 | 6.47e-44 | 162 |
| MS.gene22464.t1 | AT3G53350 | 32.704 | 477 | 182 | 15 | 145 | 610 | 47 | 395 | 2.78e-36 | 140 |
| MS.gene22464.t1 | AT3G53350 | 37.892 | 351 | 170 | 15 | 7 | 336 | 18 | 341 | 2.64e-41 | 155 |
| MS.gene22464.t1 | AT3G53350 | 35.955 | 356 | 106 | 11 | 261 | 610 | 165 | 404 | 1.52e-35 | 139 |
| MS.gene22464.t1 | AT3G53350 | 35.659 | 387 | 171 | 16 | 1 | 336 | 1 | 360 | 1.34e-39 | 150 |
| MS.gene22464.t1 | AT3G53350 | 35.955 | 356 | 106 | 11 | 261 | 610 | 184 | 423 | 4.03e-35 | 138 |
| MS.gene22464.t1 | AT3G53350 | 37.677 | 353 | 170 | 16 | 7 | 336 | 18 | 343 | 1.44e-39 | 150 |
| MS.gene22464.t1 | AT3G53350 | 32.773 | 476 | 183 | 15 | 145 | 610 | 58 | 406 | 8.18e-36 | 139 |
| MS.gene22464.t1 | AT3G53350 | 37.677 | 353 | 170 | 16 | 7 | 336 | 18 | 343 | 1.44e-39 | 150 |
| MS.gene22464.t1 | AT3G53350 | 32.773 | 476 | 183 | 15 | 145 | 610 | 58 | 406 | 8.18e-36 | 139 |
| MS.gene22464.t1 | AT1G78430 | 35.294 | 170 | 97 | 4 | 440 | 608 | 163 | 320 | 4.35e-16 | 80.1 |
| MS.gene22464.t1 | AT1G17140 | 35.028 | 177 | 95 | 7 | 440 | 608 | 176 | 340 | 1.17e-13 | 73.2 |
| MS.gene22464.t1 | AT1G17140 | 35.028 | 177 | 95 | 7 | 440 | 608 | 176 | 340 | 1.17e-13 | 73.2 |
Find 117 sgRNAs with CRISPR-Local
Find 202 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATTTCCTTTGGGACATTTC+TGG | 0.157878 | 7.1:+8270529 | None:intergenic |
| CAGGAAAATGAGGAGATAAA+TGG | 0.230127 | 7.1:-8268635 | MS.gene22464:CDS |
| TCACGAGCTTTAGAAGTAAT+TGG | 0.259559 | 7.1:-8268845 | MS.gene22464:CDS |
| TACAATCTTTACCTTGCTTT+TGG | 0.268708 | 7.1:+8271134 | None:intergenic |
| GTCTGATCATGCTCAGATTC+AGG | 0.282526 | 7.1:-8268948 | MS.gene22464:CDS |
| TCATCTGTGTCTTCTAAATA+AGG | 0.285675 | 7.1:+8267819 | None:intergenic |
| CAGAGTTGGAAGCCGAATTA+AGG | 0.288025 | 7.1:-8267992 | MS.gene22464:CDS |
| CAATTTATGTATTTCATTCA+TGG | 0.304232 | 7.1:+8269027 | None:intergenic |
| GTTTCAAATACCTCAGATAT+TGG | 0.308574 | 7.1:+8270364 | None:intergenic |
| GGTATCTTTCTTATGGGGTT+TGG | 0.312528 | 7.1:+8270433 | None:intergenic |
| TTGTAGCAGGTGATTTCCTT+TGG | 0.322465 | 7.1:+8270518 | None:intergenic |
| AACTTTCAATCTCCTTAATT+CGG | 0.325865 | 7.1:+8267980 | None:intergenic |
| ACTTTCGGACTCATGTCTTT+TGG | 0.331128 | 7.1:+8270412 | None:intergenic |
| AATCCATTGAGTGCTGCTTT+TGG | 0.335138 | 7.1:+8269068 | None:intergenic |
| CAACTGCTCTACTTCAGATT+TGG | 0.349820 | 7.1:+8268589 | None:intergenic |
| GACTAGCAAGGTTCAGGAAT+TGG | 0.351633 | 7.1:-8269344 | MS.gene22464:CDS |
| AACCTGCGTTCGTTTACTTT+CGG | 0.363041 | 7.1:+8270397 | None:intergenic |
| TAGTGAAGCTATCTCTGTTA+TGG | 0.380107 | 7.1:-8268909 | MS.gene22464:CDS |
| TTCTTGAAGTCGTGCTTCTT+CGG | 0.385930 | 7.1:+8269147 | None:intergenic |
| TATCCTCAAGATGGAGATAA+AGG | 0.393747 | 7.1:-8268186 | MS.gene22464:CDS |
| GAAGCGGACTAGCAAGGTTC+AGG | 0.395117 | 7.1:-8269350 | MS.gene22464:CDS |
| CAGAGTTTGGTGTCTTCAAC+TGG | 0.396120 | 7.1:+8270479 | None:intergenic |
| TTCTAATCTGCAATGTGCTC+TGG | 0.400148 | 7.1:+8268519 | None:intergenic |
| TTGGGACATTTCTGGAGCAT+TGG | 0.409864 | 7.1:+8270537 | None:intergenic |
| TGGCAAAATGCAAATGCAAT+TGG | 0.415697 | 7.1:-8268825 | MS.gene22464:CDS |
| GTTGTTAGTCTGAGAAAATT+CGG | 0.416762 | 7.1:+8268976 | None:intergenic |
| TGTAGCAGGTGATTTCCTTT+GGG | 0.418456 | 7.1:+8270519 | None:intergenic |
| TAGAAGTGCTTACGAACAAC+TGG | 0.419369 | 7.1:-8268501 | MS.gene22464:CDS |
| CTGAGAAAGTCCCTTTCCAT+TGG | 0.424088 | 7.1:+8268655 | None:intergenic |
| GACAAAACTTAGCTATGTAA+TGG | 0.430384 | 7.1:-8268087 | MS.gene22464:CDS |
| CTCAATGGATTCATCTGCTC+TGG | 0.431947 | 7.1:-8269056 | MS.gene22464:CDS |
| TACTTCTAAAGCTCGTGATT+CGG | 0.433669 | 7.1:+8268850 | None:intergenic |
| TCTTATGGGGTTTGGTGAGG+AGG | 0.433762 | 7.1:+8270441 | None:intergenic |
| GCCGAGTTAGAACCAGAGTT+TGG | 0.447004 | 7.1:+8270466 | None:intergenic |
| CAATGGAAAGGGACTTTCTC+AGG | 0.447323 | 7.1:-8268654 | MS.gene22464:CDS |
| TTCCTCTTGGTATCTTATCT+CGG | 0.450936 | 7.1:+8268547 | None:intergenic |
| AGGAAAATGAGGAGATAAAT+GGG | 0.455434 | 7.1:-8268634 | MS.gene22464:CDS |
| CGAACAGCTAGATGCTGCTC+AGG | 0.462034 | 7.1:-8268024 | MS.gene22464:CDS |
| ATCTCAATTGCTGAGTTTGT+CGG | 0.465945 | 7.1:-8268372 | MS.gene22464:CDS |
| TATGGGGTTTGGTGAGGAGG+AGG | 0.467777 | 7.1:+8270444 | None:intergenic |
| CTTTCTTATGGGGTTTGGTG+AGG | 0.468528 | 7.1:+8270438 | None:intergenic |
| AAAATCTCAAGCAAAATCCT+TGG | 0.473358 | 7.1:-8268711 | MS.gene22464:CDS |
| TGCTCTGGATGTATTCCTCT+TGG | 0.476597 | 7.1:+8268534 | None:intergenic |
| CTGAATTATACGAGGAATTG+AGG | 0.480140 | 7.1:-8268445 | MS.gene22464:CDS |
| AACAGCAAGGGCTGCAGAGA+AGG | 0.483686 | 7.1:-8268117 | MS.gene22464:CDS |
| GAGTTTGTCGGCGGAGAATG+AGG | 0.485321 | 7.1:-8268360 | MS.gene22464:CDS |
| AAAAGCAAGCCTGATGGAAA+AGG | 0.487342 | 7.1:-8268396 | MS.gene22464:CDS |
| AGAACTCAGTAAAATATCTC+AGG | 0.492404 | 7.1:-8269128 | MS.gene22464:CDS |
| CTGAGCAGCATCTAGCTGTT+CGG | 0.497006 | 7.1:+8268025 | None:intergenic |
| CTTTCTACCACCGGAAACAA+TGG | 0.502144 | 7.1:-8267912 | MS.gene22464:CDS |
| TAATTCAGCCTCTCTCTCAC+TGG | 0.507829 | 7.1:+8268460 | None:intergenic |
| AAGTCGTGCTTCTTCGGAAG+CGG | 0.510056 | 7.1:+8269153 | None:intergenic |
| ATGAAAAGCGATCTACTGAC+AGG | 0.512449 | 7.1:-8268319 | MS.gene22464:CDS |
| TTCAACTGGCGAGCAGTTCG+AGG | 0.516234 | 7.1:+8270493 | None:intergenic |
| ATCTCAAGCAAAATCCTTGG+AGG | 0.518596 | 7.1:-8268708 | MS.gene22464:CDS |
| CTTGACACTGATTCAACCAA+TGG | 0.522965 | 7.1:-8268671 | MS.gene22464:CDS |
| AACTTAACTCATCGGAGTCA+TGG | 0.524619 | 7.1:-8269273 | MS.gene22464:CDS |
| CAAGATGGAGATAAAGGAGT+TGG | 0.532655 | 7.1:-8268180 | MS.gene22464:CDS |
| ACTGTCCCTGTCAAAAGAGC+TGG | 0.533173 | 7.1:-8269206 | MS.gene22464:CDS |
| GCAGTTCGAGGAGTTGTAGC+AGG | 0.533468 | 7.1:+8270505 | None:intergenic |
| GGGACTTTCTCAGGAAAATG+AGG | 0.534716 | 7.1:-8268645 | MS.gene22464:CDS |
| AGAAAACAGTATCCTCAAGA+TGG | 0.537638 | 7.1:-8268195 | MS.gene22464:CDS |
| AGAGCAGTTGAAATCTGCAT+TGG | 0.538094 | 7.1:-8268576 | MS.gene22464:CDS |
| TGTCCAAAAGCAGCACTCAA+TGG | 0.543706 | 7.1:-8269071 | MS.gene22464:CDS |
| GACAGTGGAGACACTCCAAT+CGG | 0.544738 | 7.1:-8268789 | MS.gene22464:CDS |
| CACTGAAGAGGCTGTTGAGT+CGG | 0.545865 | 7.1:-8268144 | MS.gene22464:CDS |
| ATCAGAATCCAGTGAGAGAG+AGG | 0.548200 | 7.1:-8268468 | MS.gene22464:CDS |
| ACTGATTCAACCAATGGAAA+GGG | 0.548724 | 7.1:-8268665 | MS.gene22464:CDS |
| GGAAACAATGGAAAATGTGT+AGG | 0.557199 | 7.1:-8267900 | MS.gene22464:CDS |
| AGTTTGTCGGCGGAGAATGA+GGG | 0.561099 | 7.1:-8268359 | MS.gene22464:CDS |
| CACTGATTCAACCAATGGAA+AGG | 0.561480 | 7.1:-8268666 | MS.gene22464:CDS |
| ATGCTCAGATTCAGGACTTG+AGG | 0.568384 | 7.1:-8268940 | MS.gene22464:CDS |
| AAGGTCCGAAAACTGTTGAC+GGG | 0.568934 | 7.1:+8269177 | None:intergenic |
| ATGGAAGACAAAAGTTCAAG+AGG | 0.570660 | 7.1:-8269254 | MS.gene22464:CDS |
| GAAACAATGGAAAATGTGTA+GGG | 0.570873 | 7.1:-8267899 | MS.gene22464:CDS |
| TTGTTCCAACTCAAAAGCTA+AGG | 0.572666 | 7.1:+8268736 | None:intergenic |
| AAAGGTCCGAAAACTGTTGA+CGG | 0.573588 | 7.1:+8269176 | None:intergenic |
| ACCAAACTCTGGTTCTAACT+CGG | 0.577387 | 7.1:-8270467 | MS.gene22464:CDS |
| ACTCCTTTATCTCCATCTTG+AGG | 0.578972 | 7.1:+8268183 | None:intergenic |
| GCAGAATAAAATCACTGAAG+AGG | 0.581197 | 7.1:-8268156 | MS.gene22464:CDS |
| GAATTGAGGAAAGCTATAGC+TGG | 0.584443 | 7.1:-8268431 | MS.gene22464:CDS |
| TTTCCTCACAAGTTCCTCCA+AGG | 0.584609 | 7.1:+8268694 | None:intergenic |
| CAGTTGAAGACACCAAACTC+TGG | 0.589837 | 7.1:-8270478 | MS.gene22464:CDS |
| CTCAGGATCGAGATCGTGCA+TGG | 0.590550 | 7.1:-8269111 | MS.gene22464:CDS |
| TCAGGCTGCAAATTCAGAGT+TGG | 0.590572 | 7.1:-8268006 | MS.gene22464:CDS |
| TTAGAAGAAGCGGACTAGCA+AGG | 0.593878 | 7.1:-8269356 | MS.gene22464:intron |
| TAGCTATGTAATGGAAGAAG+CGG | 0.596332 | 7.1:-8268078 | MS.gene22464:CDS |
| TTGAGTCGGTTGAAACAGCA+AGG | 0.601134 | 7.1:-8268130 | MS.gene22464:CDS |
| AGAGCTAAAAGCAAGCCTGA+TGG | 0.601156 | 7.1:-8268402 | MS.gene22464:CDS |
| GTGCTTCTTCGGAAGCGGAA+AGG | 0.601435 | 7.1:+8269158 | None:intergenic |
| AGAAGATCTGAAGAGTGCTA+AGG | 0.601647 | 7.1:-8269299 | MS.gene22464:CDS |
| TAAGGATCAACTTAACTCAT+CGG | 0.603512 | 7.1:-8269281 | MS.gene22464:CDS |
| GCATCTATACTTTCTACCAC+CGG | 0.615034 | 7.1:-8267921 | MS.gene22464:CDS |
| TGCATGGCAATCTGAACTTG+AGG | 0.624261 | 7.1:-8269095 | MS.gene22464:CDS |
| AGAAGATTGGAGTGTTGTGG+AGG | 0.624386 | 7.1:-8267761 | MS.gene22464:CDS |
| GTTTGTCGGCGGAGAATGAG+GGG | 0.630308 | 7.1:-8268358 | MS.gene22464:CDS |
| TTATGCAGACACCAAAAGCA+AGG | 0.637953 | 7.1:-8271145 | MS.gene22464:intron |
| TGAAAGTTCAGTCTGATCAG+TGG | 0.639619 | 7.1:-8267965 | MS.gene22464:CDS |
| TCAATTGCTGAGTTTGTCGG+CGG | 0.644952 | 7.1:-8268369 | MS.gene22464:CDS |
| GTGGAGACACTCCAATCGGA+TGG | 0.646462 | 7.1:-8268785 | MS.gene22464:CDS |
| TGATCAGTGGAGAAAAGCAG+CGG | 0.646992 | 7.1:-8267952 | MS.gene22464:CDS |
| ATCACACAGTCCAATATCTG+AGG | 0.647969 | 7.1:-8270374 | MS.gene22464:intron |
| AATCCTTGGAGGAACTTGTG+AGG | 0.648483 | 7.1:-8268697 | MS.gene22464:CDS |
| TCAGATTCAGGACTTGAGGA+TGG | 0.651660 | 7.1:-8268936 | MS.gene22464:CDS |
| TCAGTGGAGAAAAGCAGCGG+AGG | 0.652899 | 7.1:-8267949 | MS.gene22464:CDS |
| TGAAGAAGATTGGAGTGTTG+TGG | 0.655720 | 7.1:-8267764 | MS.gene22464:CDS |
| GAAGACAAAAGTTCAAGAGG+AGG | 0.660033 | 7.1:-8269251 | MS.gene22464:CDS |
| GGATAAAAGTAACAGAAGAG+TGG | 0.662477 | 7.1:-8268057 | MS.gene22464:CDS |
| TGCCGAGATAAGATACCAAG+AGG | 0.662730 | 7.1:-8268549 | MS.gene22464:CDS |
| ATGCTCCAGAAATGTCCCAA+AGG | 0.664123 | 7.1:-8270534 | MS.gene22464:CDS |
| TGAAAAGCGATCTACTGACA+GGG | 0.672889 | 7.1:-8268318 | MS.gene22464:CDS |
| GTCCGAAAGTAAACGAACGC+AGG | 0.685794 | 7.1:-8270399 | MS.gene22464:CDS |
| GGAAACAGTAAATAAGACAG+TGG | 0.686379 | 7.1:-8268804 | MS.gene22464:CDS |
| AGATTTGGCAGAGATAAGCG+CGG | 0.695807 | 7.1:+8268604 | None:intergenic |
| TGAGTCGGTTGAAACAGCAA+GGG | 0.701089 | 7.1:-8268129 | MS.gene22464:CDS |
| TGGATACTGATGTTGCAGAG+TGG | 0.711923 | 7.1:-8268265 | MS.gene22464:CDS |
| GAGAGAGGCTGAATTATACG+AGG | 0.729149 | 7.1:-8268453 | MS.gene22464:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAATTAATCAATTAAGTT+GGG | + | chr7.1:8268688-8268707 | None:intergenic | 10.0% |
| !!! | GATGAATATTAAAAATATTT+TGG | + | chr7.1:8269144-8269163 | None:intergenic | 10.0% |
| !! | AAATATCAAATATAAGCAAA+TGG | + | chr7.1:8268847-8268866 | None:intergenic | 15.0% |
| !! | ATTTGTTTATTTATGCTAAT+TGG | - | chr7.1:8268313-8268332 | MS.gene22464:CDS | 15.0% |
| !! | CATAAATTAATCAATTAAGT+TGG | + | chr7.1:8268689-8268708 | None:intergenic | 15.0% |
| !!! | GATTAATTTATGAGTATTTT+TGG | - | chr7.1:8268697-8268716 | MS.gene22464:CDS | 15.0% |
| !!! | GTTCGTAAATTTTTTTTTTA+TGG | - | chr7.1:8269066-8269085 | MS.gene22464:CDS | 15.0% |
| !! | AAGAGATAATTATTATAACG+AGG | + | chr7.1:8268665-8268684 | None:intergenic | 20.0% |
| !! | ACTAAGAGAAGTTTATTTAA+AGG | + | chr7.1:8268044-8268063 | None:intergenic | 20.0% |
| !! | ACTTGTATAATGTATATGAA+TGG | - | chr7.1:8268182-8268201 | MS.gene22464:CDS | 20.0% |
| !! | AGAGATAATTATTATAACGA+GGG | + | chr7.1:8268664-8268683 | None:intergenic | 20.0% |
| !! | AGTAAATGAAACAAAAACAT+TGG | + | chr7.1:8268136-8268155 | None:intergenic | 20.0% |
| !! | ATAATAATAATTGAGTTCAG+AGG | + | chr7.1:8268556-8268575 | None:intergenic | 20.0% |
| !! | CAATTTATGTATTTCATTCA+TGG | + | chr7.1:8269865-8269884 | None:intergenic | 20.0% |
| !! | TAATAATAATTGAGTTCAGA+GGG | + | chr7.1:8268555-8268574 | None:intergenic | 20.0% |
| !! | TGGAATAATAACATTAAATG+TGG | - | chr7.1:8268717-8268736 | MS.gene22464:CDS | 20.0% |
| !! | TTTGTTTCATTTACTTAAGT+TGG | - | chr7.1:8268141-8268160 | MS.gene22464:CDS | 20.0% |
| !!! | ATGTTTTTGTTTTTCTTCTT+TGG | + | chr7.1:8271103-8271122 | None:intergenic | 20.0% |
| ! | AACTTTCAATCTCCTTAATT+CGG | + | chr7.1:8270912-8270931 | None:intergenic | 25.0% |
| ! | AGTATCTATCAATATCATCA+AGG | + | chr7.1:8269012-8269031 | None:intergenic | 25.0% |
| ! | ATCTTGAATTCATGTGAAAA+CGG | - | chr7.1:8268618-8268637 | MS.gene22464:CDS | 25.0% |
| ! | GAGATAATTATTATAACGAG+GGG | + | chr7.1:8268663-8268682 | None:intergenic | 25.0% |
| ! | GATAGATACTTATTGTTTAG+TGG | - | chr7.1:8269022-8269041 | MS.gene22464:CDS | 25.0% |
| ! | TATGGAAAAACTAAGAAATG+AGG | - | chr7.1:8269998-8270017 | MS.gene22464:intron | 25.0% |
| ! | TATTTGAGTCCAACAAATTT+AGG | - | chr7.1:8268862-8268881 | MS.gene22464:CDS | 25.0% |
| ! | TGAAATTGTAAAGTTAACTG+TGG | - | chr7.1:8267916-8267935 | MS.gene22464:CDS | 25.0% |
| ! | TGTCAAAACAAATTTGTGAA+GGG | - | chr7.1:8267986-8268005 | MS.gene22464:CDS | 25.0% |
| ! | TTGTCAAAACAAATTTGTGA+AGG | - | chr7.1:8267985-8268004 | MS.gene22464:CDS | 25.0% |
| !! | AAACTTCTCTTAGTTCTTAT+TGG | - | chr7.1:8268050-8268069 | MS.gene22464:CDS | 25.0% |
| !! | AACTTCTCTTAGTTCTTATT+GGG | - | chr7.1:8268051-8268070 | MS.gene22464:CDS | 25.0% |
| !! | TATTTATGCTAATTGGCTTA+TGG | - | chr7.1:8268320-8268339 | MS.gene22464:CDS | 25.0% |
| !! | TCTTTTGGTATCTTTCTTAT+GGG | + | chr7.1:8268465-8268484 | None:intergenic | 25.0% |
| !! | TTATAATGTGTCTCTTTTTC+TGG | - | chr7.1:8269508-8269527 | MS.gene22464:intron | 25.0% |
| !!! | TTCAGTTACTTTTTTCAACT+CGG | + | chr7.1:8270675-8270694 | None:intergenic | 25.0% |
| AAAAACATGCTGAAGAAGAT+TGG | - | chr7.1:8271115-8271134 | MS.gene22464:intron | 30.0% | |
| AAAATCTCAAGCAAAATCCT+TGG | - | chr7.1:8270178-8270197 | MS.gene22464:intron | 30.0% | |
| AGAACTCAGTAAAATATCTC+AGG | - | chr7.1:8269761-8269780 | MS.gene22464:intron | 30.0% | |
| AGGAAAATGAGGAGATAAAT+GGG | - | chr7.1:8270255-8270274 | MS.gene22464:intron | 30.0% | |
| GAAACAATGGAAAATGTGTA+GGG | - | chr7.1:8270990-8271009 | MS.gene22464:intron | 30.0% | |
| GACAAAACTTAGCTATGTAA+TGG | - | chr7.1:8270802-8270821 | MS.gene22464:intron | 30.0% | |
| GTTTCAAATACCTCAGATAT+TGG | + | chr7.1:8268528-8268547 | None:intergenic | 30.0% | |
| TAAGGATCAACTTAACTCAT+CGG | - | chr7.1:8269608-8269627 | MS.gene22464:intron | 30.0% | |
| TCATCTGTGTCTTCTAAATA+AGG | + | chr7.1:8271073-8271092 | None:intergenic | 30.0% | |
| ! | CTTTTGCTAATAATGTGGAT+GGG | - | chr7.1:8268941-8268960 | MS.gene22464:CDS | 30.0% |
| ! | CTTTTGGTATCTTTCTTATG+GGG | + | chr7.1:8268464-8268483 | None:intergenic | 30.0% |
| ! | GTCTTTTGGTATCTTTCTTA+TGG | + | chr7.1:8268466-8268485 | None:intergenic | 30.0% |
| ! | GTTGTTAGTCTGAGAAAATT+CGG | + | chr7.1:8269916-8269935 | None:intergenic | 30.0% |
| ! | TACAATCTTTACCTTGCTTT+TGG | + | chr7.1:8267758-8267777 | None:intergenic | 30.0% |
| ! | TACACATTTTCCATTGTTTC+CGG | + | chr7.1:8270990-8271009 | None:intergenic | 30.0% |
| ! | TCTTTTGCTAATAATGTGGA+TGG | - | chr7.1:8268940-8268959 | MS.gene22464:CDS | 30.0% |
| !! | AAAAGAGTGCCTAAATTTGT+TGG | + | chr7.1:8268874-8268893 | None:intergenic | 30.0% |
| ACTTGACATTTAACCCACTT+GGG | - | chr7.1:8268747-8268766 | MS.gene22464:CDS | 35.0% | |
| AGAAAACAGTATCCTCAAGA+TGG | - | chr7.1:8270694-8270713 | MS.gene22464:intron | 35.0% | |
| AGTTAGGAGAATCAATCATC+CGG | + | chr7.1:8268249-8268268 | None:intergenic | 35.0% | |
| ATCTCAATTGCTGAGTTTGT+CGG | - | chr7.1:8270517-8270536 | MS.gene22464:CDS | 35.0% | |
| ATGGAAGACAAAAGTTCAAG+AGG | - | chr7.1:8269635-8269654 | MS.gene22464:intron | 35.0% | |
| CAAATATAAGCAAATGGCAC+CGG | + | chr7.1:8268841-8268860 | None:intergenic | 35.0% | |
| CAGGAAAATGAGGAGATAAA+TGG | - | chr7.1:8270254-8270273 | MS.gene22464:intron | 35.0% | |
| CTGAATTATACGAGGAATTG+AGG | - | chr7.1:8270444-8270463 | MS.gene22464:CDS | 35.0% | |
| GCAGAATAAAATCACTGAAG+AGG | - | chr7.1:8270733-8270752 | MS.gene22464:intron | 35.0% | |
| GGAAAATGTGTAGGGAAAAA+CGG | - | chr7.1:8270998-8271017 | MS.gene22464:intron | 35.0% | |
| GGAAACAATGGAAAATGTGT+AGG | - | chr7.1:8270989-8271008 | MS.gene22464:intron | 35.0% | |
| GGAAACAGTAAATAAGACAG+TGG | - | chr7.1:8270085-8270104 | MS.gene22464:intron | 35.0% | |
| GGATAAAAGTAACAGAAGAG+TGG | - | chr7.1:8270832-8270851 | MS.gene22464:intron | 35.0% | |
| TACTTGACATTTAACCCACT+TGG | - | chr7.1:8268746-8268765 | MS.gene22464:CDS | 35.0% | |
| TAGTGAAGCTATCTCTGTTA+TGG | - | chr7.1:8269980-8269999 | MS.gene22464:intron | 35.0% | |
| TATATGAATGGCGCTGTAAA+CGG | - | chr7.1:8268194-8268213 | MS.gene22464:CDS | 35.0% | |
| TATCCTCAAGATGGAGATAA+AGG | - | chr7.1:8270703-8270722 | MS.gene22464:intron | 35.0% | |
| TGCTGCAGAACTCAAAAAAA+TGG | - | chr7.1:8270604-8270623 | MS.gene22464:intron | 35.0% | |
| TGGCAAAATGCAAATGCAAT+TGG | - | chr7.1:8270064-8270083 | MS.gene22464:intron | 35.0% | |
| TTCCTCTTGGTATCTTATCT+CGG | + | chr7.1:8270345-8270364 | None:intergenic | 35.0% | |
| TTGATCACTTCAGTGTGTTA+TGG | - | chr7.1:8268268-8268287 | MS.gene22464:CDS | 35.0% | |
| TTGTTCCAACTCAAAAGCTA+AGG | + | chr7.1:8270156-8270175 | None:intergenic | 35.0% | |
| ! | ACTGATTCAACCAATGGAAA+GGG | - | chr7.1:8270224-8270243 | MS.gene22464:intron | 35.0% |
| ! | ATTGAGATTCCTTTTCCATC+AGG | + | chr7.1:8270505-8270524 | None:intergenic | 35.0% |
| ! | GCACTCTTTTGCTAATAATG+TGG | - | chr7.1:8268936-8268955 | MS.gene22464:CDS | 35.0% |
| ! | TAGCTATGTAATGGAAGAAG+CGG | - | chr7.1:8270811-8270830 | MS.gene22464:intron | 35.0% |
| ! | TATTATAACGAGGGGCATAT+TGG | + | chr7.1:8268655-8268674 | None:intergenic | 35.0% |
| !! | AGATCGCTTTTCATTGATAC+TGG | + | chr7.1:8270564-8270583 | None:intergenic | 35.0% |
| !! | TACTTCTAAAGCTCGTGATT+CGG | + | chr7.1:8270042-8270061 | None:intergenic | 35.0% |
| !! | TCACGAGCTTTAGAAGTAAT+TGG | - | chr7.1:8270044-8270063 | MS.gene22464:intron | 35.0% |
| !! | TTGCTTTTATACCATCCGAT+TGG | + | chr7.1:8270118-8270137 | None:intergenic | 35.0% |
| !!! | TGCTGATTTTAGTCATGAGA+TGG | + | chr7.1:8267825-8267844 | None:intergenic | 35.0% |
| !!! | TTTTCTGGCTTTAGAAGAAG+CGG | - | chr7.1:8269523-8269542 | MS.gene22464:intron | 35.0% |
| AAAAGCAAGCCTGATGGAAA+AGG | - | chr7.1:8270493-8270512 | MS.gene22464:CDS | 40.0% | |
| AAAGGTCCGAAAACTGTTGA+CGG | + | chr7.1:8269716-8269735 | None:intergenic | 40.0% | |
| AACCTGCGTTCGTTTACTTT+CGG | + | chr7.1:8268495-8268514 | None:intergenic | 40.0% | |
| AACTTAACTCATCGGAGTCA+TGG | - | chr7.1:8269616-8269635 | MS.gene22464:intron | 40.0% | |
| ACTCCTTTATCTCCATCTTG+AGG | + | chr7.1:8270709-8270728 | None:intergenic | 40.0% | |
| AGAGCAGTTGAAATCTGCAT+TGG | - | chr7.1:8270313-8270332 | MS.gene22464:intron | 40.0% | |
| ATCACACAGTCCAATATCTG+AGG | - | chr7.1:8268515-8268534 | MS.gene22464:CDS | 40.0% | |
| ATCTCAAGCAAAATCCTTGG+AGG | - | chr7.1:8270181-8270200 | MS.gene22464:intron | 40.0% | |
| ATGAAAAGCGATCTACTGAC+AGG | - | chr7.1:8270570-8270589 | MS.gene22464:intron | 40.0% | |
| ATGAGATGGCACAAAGAGAA+TGG | + | chr7.1:8267811-8267830 | None:intergenic | 40.0% | |
| CAACTGCTCTACTTCAGATT+TGG | + | chr7.1:8270303-8270322 | None:intergenic | 40.0% | |
| CAAGATCAAGTATGCTTGTG+TGG | - | chr7.1:8268109-8268128 | MS.gene22464:CDS | 40.0% | |
| CAAGATGGAGATAAAGGAGT+TGG | - | chr7.1:8270709-8270728 | MS.gene22464:intron | 40.0% | |
| CACACAAGCATACTTGATCT+TGG | + | chr7.1:8268111-8268130 | None:intergenic | 40.0% | |
| CACACTGAAGTGATCAAGTT+AGG | + | chr7.1:8268265-8268284 | None:intergenic | 40.0% | |
| CACTTCAGTGTGTTATGGTT+TGG | - | chr7.1:8268273-8268292 | MS.gene22464:CDS | 40.0% | |
| GAAGACAAAAGTTCAAGAGG+AGG | - | chr7.1:8269638-8269657 | MS.gene22464:intron | 40.0% | |
| GAATTGAGGAAAGCTATAGC+TGG | - | chr7.1:8270458-8270477 | MS.gene22464:CDS | 40.0% | |
| GCATCTATACTTTCTACCAC+CGG | - | chr7.1:8270968-8270987 | MS.gene22464:intron | 40.0% | |
| GGTATCTTTCTTATGGGGTT+TGG | + | chr7.1:8268459-8268478 | None:intergenic | 40.0% | |
| TGAAAAGCGATCTACTGACA+GGG | - | chr7.1:8270571-8270590 | MS.gene22464:intron | 40.0% | |
| TGAAAGTTCAGTCTGATCAG+TGG | - | chr7.1:8270924-8270943 | MS.gene22464:intron | 40.0% | |
| TGTAGCAGGTGATTTCCTTT+GGG | + | chr7.1:8268373-8268392 | None:intergenic | 40.0% | |
| TTCTAATCTGCAATGTGCTC+TGG | + | chr7.1:8270373-8270392 | None:intergenic | 40.0% | |
| TTCTTGAAGTCGTGCTTCTT+CGG | + | chr7.1:8269745-8269764 | None:intergenic | 40.0% | |
| TTGTAGCAGGTGATTTCCTT+TGG | + | chr7.1:8268374-8268393 | None:intergenic | 40.0% | |
| ! | ACATTTTCCATTGTTTCCGG+TGG | + | chr7.1:8270987-8271006 | None:intergenic | 40.0% |
| ! | ACTTTCGGACTCATGTCTTT+TGG | + | chr7.1:8268480-8268499 | None:intergenic | 40.0% |
| ! | AGAATCCCGTCAACAGTTTT+CGG | - | chr7.1:8269707-8269726 | MS.gene22464:intron | 40.0% |
| ! | ATTCTTCCAGCTCTTTTGAC+AGG | + | chr7.1:8269692-8269711 | None:intergenic | 40.0% |
| ! | GGTTAGTTAGACTTGCCTTA+TGG | - | chr7.1:8268962-8268981 | MS.gene22464:CDS | 40.0% |
| ! | TATGCTAATTGGCTTATGGC+TGG | - | chr7.1:8268324-8268343 | MS.gene22464:CDS | 40.0% |
| ! | TTCTTCCAGCTCTTTTGACA+GGG | + | chr7.1:8269691-8269710 | None:intergenic | 40.0% |
| !! | ACCAAACTCTGGTTCTAACT+CGG | - | chr7.1:8268422-8268441 | MS.gene22464:CDS | 40.0% |
| !! | AGAAGATCTGAAGAGTGCTA+AGG | - | chr7.1:8269590-8269609 | MS.gene22464:intron | 40.0% |
| !! | CAAGTCCTTAGCTTTTGAGT+TGG | - | chr7.1:8270148-8270167 | MS.gene22464:intron | 40.0% |
| !! | CACTGATTCAACCAATGGAA+AGG | - | chr7.1:8270223-8270242 | MS.gene22464:intron | 40.0% |
| !! | CTTGACACTGATTCAACCAA+TGG | - | chr7.1:8270218-8270237 | MS.gene22464:intron | 40.0% |
| !! | GATTTCCTTTGGGACATTTC+TGG | + | chr7.1:8268363-8268382 | None:intergenic | 40.0% |
| !! | TAGAAGTGCTTACGAACAAC+TGG | - | chr7.1:8270388-8270407 | MS.gene22464:CDS | 40.0% |
| !! | TGAAGAAGATTGGAGTGTTG+TGG | - | chr7.1:8271125-8271144 | MS.gene22464:intron | 40.0% |
| !!! | AATCCATTGAGTGCTGCTTT+TGG | + | chr7.1:8269824-8269843 | None:intergenic | 40.0% |
| AAGGTCCGAAAACTGTTGAC+GGG | + | chr7.1:8269715-8269734 | None:intergenic | 45.0% | |
| AATCCTTGGAGGAACTTGTG+AGG | - | chr7.1:8270192-8270211 | MS.gene22464:intron | 45.0% | |
| AGAGCTAAAAGCAAGCCTGA+TGG | - | chr7.1:8270487-8270506 | MS.gene22464:CDS | 45.0% | |
| AGATTTGGCAGAGATAAGCG+CGG | + | chr7.1:8270288-8270307 | None:intergenic | 45.0% | |
| ATCAGAATCCAGTGAGAGAG+AGG | - | chr7.1:8270421-8270440 | MS.gene22464:CDS | 45.0% | |
| ATGCTCAGATTCAGGACTTG+AGG | - | chr7.1:8269949-8269968 | MS.gene22464:intron | 45.0% | |
| ATGCTCCAGAAATGTCCCAA+AGG | - | chr7.1:8268355-8268374 | MS.gene22464:CDS | 45.0% | |
| CAATGGAAAGGGACTTTCTC+AGG | - | chr7.1:8270235-8270254 | MS.gene22464:intron | 45.0% | |
| CAGAGTTGGAAGCCGAATTA+AGG | - | chr7.1:8270897-8270916 | MS.gene22464:intron | 45.0% | |
| CAGTTGAAGACACCAAACTC+TGG | - | chr7.1:8268411-8268430 | MS.gene22464:CDS | 45.0% | |
| CTGAGAAAGTCCCTTTCCAT+TGG | + | chr7.1:8270237-8270256 | None:intergenic | 45.0% | |
| CTTTCTACCACCGGAAACAA+TGG | - | chr7.1:8270977-8270996 | MS.gene22464:intron | 45.0% | |
| GACATTTAACCCACTTGGGT+TGG | - | chr7.1:8268751-8268770 | MS.gene22464:CDS | 45.0% | |
| GACTAGCAAGGTTCAGGAAT+TGG | - | chr7.1:8269545-8269564 | MS.gene22464:intron | 45.0% | |
| GAGAGAGGCTGAATTATACG+AGG | - | chr7.1:8270436-8270455 | MS.gene22464:CDS | 45.0% | |
| GGGACTTTCTCAGGAAAATG+AGG | - | chr7.1:8270244-8270263 | MS.gene22464:intron | 45.0% | |
| GTCTGATCATGCTCAGATTC+AGG | - | chr7.1:8269941-8269960 | MS.gene22464:intron | 45.0% | |
| TAATTCAGCCTCTCTCTCAC+TGG | + | chr7.1:8270432-8270451 | None:intergenic | 45.0% | |
| TAGCGTTGCATAACTTCCTC+CGG | - | chr7.1:8268227-8268246 | MS.gene22464:CDS | 45.0% | |
| TAGGAGAATCAATCATCCGG+AGG | + | chr7.1:8268246-8268265 | None:intergenic | 45.0% | |
| TCAATTGCTGAGTTTGTCGG+CGG | - | chr7.1:8270520-8270539 | MS.gene22464:CDS | 45.0% | |
| TCAGATTCAGGACTTGAGGA+TGG | - | chr7.1:8269953-8269972 | MS.gene22464:intron | 45.0% | |
| TCAGGCTGCAAATTCAGAGT+TGG | - | chr7.1:8270883-8270902 | MS.gene22464:intron | 45.0% | |
| TGAGTCGGTTGAAACAGCAA+GGG | - | chr7.1:8270760-8270779 | MS.gene22464:intron | 45.0% | |
| TGATCAGTGGAGAAAAGCAG+CGG | - | chr7.1:8270937-8270956 | MS.gene22464:intron | 45.0% | |
| TGCATGGCAATCTGAACTTG+AGG | - | chr7.1:8269794-8269813 | MS.gene22464:intron | 45.0% | |
| TGCCGAGATAAGATACCAAG+AGG | - | chr7.1:8270340-8270359 | MS.gene22464:intron | 45.0% | |
| TGGATACTGATGTTGCAGAG+TGG | - | chr7.1:8270624-8270643 | MS.gene22464:intron | 45.0% | |
| TGTCCAAAAGCAGCACTCAA+TGG | - | chr7.1:8269818-8269837 | MS.gene22464:intron | 45.0% | |
| TTGAGTCGGTTGAAACAGCA+AGG | - | chr7.1:8270759-8270778 | MS.gene22464:intron | 45.0% | |
| TTTCCTCACAAGTTCCTCCA+AGG | + | chr7.1:8270198-8270217 | None:intergenic | 45.0% | |
| ! | CTCAATGGATTCATCTGCTC+TGG | - | chr7.1:8269833-8269852 | MS.gene22464:intron | 45.0% |
| ! | TGCTCTGGATGTATTCCTCT+TGG | + | chr7.1:8270358-8270377 | None:intergenic | 45.0% |
| !! | AGAAGATTGGAGTGTTGTGG+AGG | - | chr7.1:8271128-8271147 | MS.gene22464:intron | 45.0% |
| !! | CAGAGTTTGGTGTCTTCAAC+TGG | + | chr7.1:8268413-8268432 | None:intergenic | 45.0% |
| !! | CTTTCTTATGGGGTTTGGTG+AGG | + | chr7.1:8268454-8268473 | None:intergenic | 45.0% |
| !! | TTAGAAGAAGCGGACTAGCA+AGG | - | chr7.1:8269533-8269552 | MS.gene22464:intron | 45.0% |
| !! | TTGGGACATTTCTGGAGCAT+TGG | + | chr7.1:8268355-8268374 | None:intergenic | 45.0% |
| AAGTCGTGCTTCTTCGGAAG+CGG | + | chr7.1:8269739-8269758 | None:intergenic | 50.0% | |
| ACTGTCCCTGTCAAAAGAGC+TGG | - | chr7.1:8269683-8269702 | MS.gene22464:intron | 50.0% | |
| AGTTTGTCGGCGGAGAATGA+GGG | - | chr7.1:8270530-8270549 | MS.gene22464:CDS | 50.0% | |
| CACTGAAGAGGCTGTTGAGT+CGG | - | chr7.1:8270745-8270764 | MS.gene22464:intron | 50.0% | |
| CTGAGCAGCATCTAGCTGTT+CGG | + | chr7.1:8270867-8270886 | None:intergenic | 50.0% | |
| CTTGCCTTATGGAGCTATCG+CGG | - | chr7.1:8268973-8268992 | MS.gene22464:CDS | 50.0% | |
| GAATCGAACCTGAGACCTTG+CGG | + | chr7.1:8268815-8268834 | None:intergenic | 50.0% | |
| GACAGTGGAGACACTCCAAT+CGG | - | chr7.1:8270100-8270119 | MS.gene22464:intron | 50.0% | |
| GCCGAGTTAGAACCAGAGTT+TGG | + | chr7.1:8268426-8268445 | None:intergenic | 50.0% | |
| GTCCGAAAGTAAACGAACGC+AGG | - | chr7.1:8268490-8268509 | MS.gene22464:CDS | 50.0% | |
| GTCTCAGGTTCGATTCTCTC+CGG | - | chr7.1:8268819-8268838 | MS.gene22464:CDS | 50.0% | |
| TTAGCCGCGATAGCTCCATA+AGG | + | chr7.1:8268980-8268999 | None:intergenic | 50.0% | |
| !! | GTGGTATTGGCTTGGGTCTT+GGG | - | chr7.1:8268778-8268797 | MS.gene22464:CDS | 50.0% |
| !! | TCTTATGGGGTTTGGTGAGG+AGG | + | chr7.1:8268451-8268470 | None:intergenic | 50.0% |
| AACAGCAAGGGCTGCAGAGA+AGG | - | chr7.1:8270772-8270791 | MS.gene22464:intron | 55.0% | |
| AGACCCAAGCCAATACCACC+AGG | + | chr7.1:8268777-8268796 | None:intergenic | 55.0% | |
| CGAACAGCTAGATGCTGCTC+AGG | - | chr7.1:8270865-8270884 | MS.gene22464:intron | 55.0% | |
| CTCAGGATCGAGATCGTGCA+TGG | - | chr7.1:8269778-8269797 | MS.gene22464:intron | 55.0% | |
| GAGTTTGTCGGCGGAGAATG+AGG | - | chr7.1:8270529-8270548 | MS.gene22464:CDS | 55.0% | |
| GCAGTTCGAGGAGTTGTAGC+AGG | + | chr7.1:8268387-8268406 | None:intergenic | 55.0% | |
| GTGCTTCTTCGGAAGCGGAA+AGG | + | chr7.1:8269734-8269753 | None:intergenic | 55.0% | |
| GTGGAGACACTCCAATCGGA+TGG | - | chr7.1:8270104-8270123 | MS.gene22464:intron | 55.0% | |
| GTTTGTCGGCGGAGAATGAG+GGG | - | chr7.1:8270531-8270550 | MS.gene22464:CDS | 55.0% | |
| TCAGTGGAGAAAAGCAGCGG+AGG | - | chr7.1:8270940-8270959 | MS.gene22464:intron | 55.0% | |
| TTCAACTGGCGAGCAGTTCG+AGG | + | chr7.1:8268399-8268418 | None:intergenic | 55.0% | |
| !! | GAAGCGGACTAGCAAGGTTC+AGG | - | chr7.1:8269539-8269558 | MS.gene22464:intron | 55.0% |
| !! | GGTGGTATTGGCTTGGGTCT+TGG | - | chr7.1:8268777-8268796 | MS.gene22464:CDS | 55.0% |
| !! | TATGGGGTTTGGTGAGGAGG+AGG | + | chr7.1:8268448-8268467 | None:intergenic | 55.0% |
| !! | TGGCCTGGTGGTATTGGCTT+GGG | - | chr7.1:8268771-8268790 | MS.gene22464:CDS | 55.0% |
| !! | TTAACCCACTTGGGTTGGCC+TGG | - | chr7.1:8268756-8268775 | MS.gene22464:CDS | 55.0% |
| !! | TTGGCCTGGTGGTATTGGCT+TGG | - | chr7.1:8268770-8268789 | MS.gene22464:CDS | 55.0% |
| !! | TTGGGTTGGCCTGGTGGTAT+TGG | - | chr7.1:8268765-8268784 | MS.gene22464:CDS | 55.0% |
| ACCACCAGGCCAACCCAAGT+GGG | + | chr7.1:8268763-8268782 | None:intergenic | 60.0% | |
| TACCACCAGGCCAACCCAAG+TGG | + | chr7.1:8268764-8268783 | None:intergenic | 60.0% | |
| TCGAACCTGAGACCTTGCGG+AGG | + | chr7.1:8268812-8268831 | None:intergenic | 60.0% | |
| GTGCTCCTCCGCAAGGTCTC+AGG | - | chr7.1:8268804-8268823 | MS.gene22464:CDS | 65.0% | |
| ! | TGGGAGTGTGCTCCTCCGCA+AGG | - | chr7.1:8268797-8268816 | MS.gene22464:CDS | 65.0% |
| !! | ACCCACTTGGGTTGGCCTGG+TGG | - | chr7.1:8268759-8268778 | MS.gene22464:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 8267746 | 8271165 | 8267746 | ID=MS.gene22464 |
| chr7.1 | mRNA | 8267746 | 8271165 | 8267746 | ID=MS.gene22464.t1;Parent=MS.gene22464 |
| chr7.1 | exon | 8271146 | 8271165 | 8271146 | ID=MS.gene22464.t1.exon1;Parent=MS.gene22464.t1 |
| chr7.1 | CDS | 8271146 | 8271165 | 8271146 | ID=cds.MS.gene22464.t1;Parent=MS.gene22464.t1 |
| chr7.1 | exon | 8270375 | 8270561 | 8270375 | ID=MS.gene22464.t1.exon2;Parent=MS.gene22464.t1 |
| chr7.1 | CDS | 8270375 | 8270561 | 8270375 | ID=cds.MS.gene22464.t1;Parent=MS.gene22464.t1 |
| chr7.1 | exon | 8267746 | 8269374 | 8267746 | ID=MS.gene22464.t1.exon3;Parent=MS.gene22464.t1 |
| chr7.1 | CDS | 8267746 | 8269374 | 8267746 | ID=cds.MS.gene22464.t1;Parent=MS.gene22464.t1 |
| Gene Sequence |
| Protein sequence |
