Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30905.t1 | XP_013468242.1 | 82.8 | 586 | 101 | 0 | 1 | 586 | 1 | 586 | 3.00E-125 | 459.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30905.t1 | Q9ZQC5 | 34.6 | 624 | 329 | 11 | 1 | 586 | 1 | 583 | 1.2e-29 | 132.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30905.t1 | A0A072VJQ3 | 82.8 | 586 | 101 | 0 | 1 | 586 | 1 | 586 | 2.1e-125 | 459.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049711 | MS.gene30905 | 0.820865 | 5.47E-53 | -1.69E-46 |
| MS.gene051719 | MS.gene30905 | 0.802101 | 6.58E-49 | -1.69E-46 |
| MS.gene051720 | MS.gene30905 | 0.822403 | 2.41E-53 | -1.69E-46 |
| MS.gene052732 | MS.gene30905 | 0.818639 | 1.76E-52 | -1.69E-46 |
| MS.gene053144 | MS.gene30905 | 0.840395 | 8.92E-58 | -1.69E-46 |
| MS.gene053536 | MS.gene30905 | 0.810998 | 8.72E-51 | -1.69E-46 |
| MS.gene053538 | MS.gene30905 | 0.809421 | 1.91E-50 | -1.69E-46 |
| MS.gene053581 | MS.gene30905 | 0.821785 | 3.36E-53 | -1.69E-46 |
| MS.gene054584 | MS.gene30905 | 0.85187 | 6.69E-61 | -1.69E-46 |
| MS.gene055465 | MS.gene30905 | 0.834437 | 3.00E-56 | -1.69E-46 |
| MS.gene055466 | MS.gene30905 | 0.81177 | 5.93E-51 | -1.69E-46 |
| MS.gene055468 | MS.gene30905 | 0.814848 | 1.25E-51 | -1.69E-46 |
| MS.gene055537 | MS.gene30905 | 0.848471 | 6.00E-60 | -1.69E-46 |
| MS.gene058087 | MS.gene30905 | 0.811862 | 5.66E-51 | -1.69E-46 |
| MS.gene058945 | MS.gene30905 | 0.814114 | 1.82E-51 | -1.69E-46 |
| MS.gene060519 | MS.gene30905 | 0.805115 | 1.56E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene020474 | MS.gene30905 | PPI |
| MS.gene57038 | MS.gene30905 | PPI |
| MS.gene009801 | MS.gene30905 | PPI |
| MS.gene030154 | MS.gene30905 | PPI |
| MS.gene015702 | MS.gene30905 | PPI |
| MS.gene029217 | MS.gene30905 | PPI |
| MS.gene30905 | MS.gene064148 | PPI |
| MS.gene31961 | MS.gene30905 | PPI |
| MS.gene063692 | MS.gene30905 | PPI |
| MS.gene93135 | MS.gene30905 | PPI |
| MS.gene30905 | MS.gene56986 | PPI |
| MS.gene54155 | MS.gene30905 | PPI |
| MS.gene048551 | MS.gene30905 | PPI |
| MS.gene39455 | MS.gene30905 | PPI |
| MS.gene029219 | MS.gene30905 | PPI |
| MS.gene23912 | MS.gene30905 | PPI |
| MS.gene065074 | MS.gene30905 | PPI |
| MS.gene037356 | MS.gene30905 | PPI |
| MS.gene68625 | MS.gene30905 | PPI |
| MS.gene39229 | MS.gene30905 | PPI |
| MS.gene50208 | MS.gene30905 | PPI |
| MS.gene034650 | MS.gene30905 | PPI |
| MS.gene33795 | MS.gene30905 | PPI |
| MS.gene008635 | MS.gene30905 | PPI |
| MS.gene05775 | MS.gene30905 | PPI |
| MS.gene30905 | MS.gene76250 | PPI |
| MS.gene03912 | MS.gene30905 | PPI |
| MS.gene26785 | MS.gene30905 | PPI |
| MS.gene31930 | MS.gene30905 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30905.t1 | MTR_1g066850 | 96.758 | 586 | 19 | 0 | 1 | 586 | 1 | 586 | 0.0 | 1122 |
| MS.gene30905.t1 | MTR_7g100730 | 62.219 | 622 | 187 | 7 | 1 | 586 | 1 | 610 | 0.0 | 638 |
| MS.gene30905.t1 | MTR_4g461060 | 44.374 | 631 | 289 | 9 | 1 | 583 | 1 | 617 | 1.06e-134 | 406 |
| MS.gene30905.t1 | MTR_4g461060 | 44.249 | 626 | 287 | 9 | 6 | 583 | 3 | 614 | 1.07e-132 | 401 |
| MS.gene30905.t1 | MTR_7g061150 | 63.102 | 374 | 94 | 5 | 245 | 586 | 2 | 363 | 1.38e-128 | 381 |
| MS.gene30905.t1 | MTR_2g093260 | 41.763 | 431 | 182 | 10 | 191 | 583 | 83 | 482 | 1.52e-69 | 233 |
| MS.gene30905.t1 | MTR_2g093240 | 35.088 | 114 | 39 | 2 | 473 | 586 | 3 | 81 | 6.99e-14 | 67.8 |
| MS.gene30905.t1 | MTR_5g007350 | 29.304 | 273 | 145 | 9 | 12 | 250 | 38 | 296 | 8.11e-14 | 75.1 |
| MS.gene30905.t1 | MTR_4g478190 | 27.829 | 327 | 190 | 11 | 7 | 287 | 8 | 334 | 8.40e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30905.t1 | AT2G37080 | 46.178 | 641 | 230 | 14 | 1 | 586 | 1 | 581 | 2.78e-146 | 435 |
| MS.gene30905.t1 | AT2G37080 | 46.034 | 643 | 230 | 15 | 1 | 586 | 1 | 583 | 2.75e-144 | 430 |
| MS.gene30905.t1 | AT2G37080 | 46.034 | 643 | 230 | 15 | 1 | 586 | 1 | 583 | 2.75e-144 | 430 |
| MS.gene30905.t1 | AT5G60210 | 39.350 | 615 | 287 | 12 | 1 | 583 | 1 | 561 | 5.09e-106 | 330 |
| MS.gene30905.t1 | AT5G60210 | 39.350 | 615 | 287 | 12 | 1 | 583 | 1 | 561 | 5.09e-106 | 330 |
| MS.gene30905.t1 | AT5G60210 | 39.350 | 615 | 287 | 12 | 1 | 583 | 1 | 561 | 5.09e-106 | 330 |
| MS.gene30905.t1 | AT5G60210 | 39.350 | 615 | 287 | 12 | 1 | 583 | 1 | 561 | 5.09e-106 | 330 |
| MS.gene30905.t1 | AT5G60210 | 38.689 | 610 | 288 | 12 | 6 | 583 | 30 | 585 | 2.25e-101 | 319 |
| MS.gene30905.t1 | AT5G60210 | 38.689 | 610 | 288 | 12 | 6 | 583 | 30 | 585 | 2.25e-101 | 319 |
| MS.gene30905.t1 | AT3G53350 | 37.730 | 326 | 150 | 11 | 1 | 300 | 1 | 299 | 1.80e-45 | 166 |
| MS.gene30905.t1 | AT3G53350 | 33.750 | 320 | 103 | 8 | 275 | 586 | 176 | 394 | 3.04e-30 | 123 |
| MS.gene30905.t1 | AT3G53350 | 37.730 | 326 | 150 | 11 | 1 | 300 | 1 | 299 | 1.80e-45 | 166 |
| MS.gene30905.t1 | AT3G53350 | 33.750 | 320 | 103 | 8 | 275 | 586 | 176 | 394 | 3.04e-30 | 123 |
| MS.gene30905.t1 | AT3G53350 | 37.500 | 328 | 150 | 12 | 1 | 300 | 1 | 301 | 1.70e-43 | 160 |
| MS.gene30905.t1 | AT3G53350 | 33.750 | 320 | 103 | 8 | 275 | 586 | 178 | 396 | 3.91e-30 | 122 |
| MS.gene30905.t1 | AT3G53350 | 37.500 | 328 | 150 | 12 | 1 | 300 | 1 | 301 | 1.70e-43 | 160 |
| MS.gene30905.t1 | AT3G53350 | 33.750 | 320 | 103 | 8 | 275 | 586 | 178 | 396 | 3.91e-30 | 122 |
| MS.gene30905.t1 | AT3G53350 | 37.500 | 328 | 150 | 12 | 1 | 300 | 1 | 301 | 1.70e-43 | 160 |
| MS.gene30905.t1 | AT3G53350 | 33.750 | 320 | 103 | 8 | 275 | 586 | 178 | 396 | 3.91e-30 | 122 |
| MS.gene30905.t1 | AT3G53350 | 37.188 | 320 | 148 | 11 | 7 | 300 | 18 | 310 | 1.11e-42 | 158 |
| MS.gene30905.t1 | AT3G53350 | 33.750 | 320 | 103 | 8 | 275 | 586 | 187 | 405 | 6.45e-30 | 122 |
| MS.gene30905.t1 | AT3G53350 | 36.957 | 322 | 148 | 12 | 7 | 300 | 18 | 312 | 6.79e-41 | 153 |
| MS.gene30905.t1 | AT3G53350 | 33.750 | 320 | 103 | 8 | 275 | 586 | 189 | 407 | 6.59e-30 | 122 |
| MS.gene30905.t1 | AT3G53350 | 36.957 | 322 | 148 | 12 | 7 | 300 | 18 | 312 | 6.79e-41 | 153 |
| MS.gene30905.t1 | AT3G53350 | 33.750 | 320 | 103 | 8 | 275 | 586 | 189 | 407 | 6.59e-30 | 122 |
| MS.gene30905.t1 | AT3G53350 | 34.551 | 356 | 150 | 12 | 1 | 300 | 1 | 329 | 1.93e-39 | 149 |
| MS.gene30905.t1 | AT3G53350 | 33.750 | 320 | 103 | 8 | 275 | 586 | 206 | 424 | 2.68e-29 | 120 |
| MS.gene30905.t1 | AT1G78430 | 38.418 | 177 | 93 | 4 | 411 | 586 | 162 | 323 | 1.42e-21 | 96.7 |
| MS.gene30905.t1 | AT1G17140 | 33.632 | 223 | 125 | 10 | 373 | 586 | 135 | 343 | 3.50e-14 | 74.7 |
| MS.gene30905.t1 | AT1G17140 | 33.632 | 223 | 125 | 10 | 373 | 586 | 135 | 343 | 3.50e-14 | 74.7 |
| MS.gene30905.t1 | AT5G16730 | 28.646 | 384 | 207 | 14 | 19 | 346 | 24 | 396 | 1.97e-11 | 67.4 |
Find 109 sgRNAs with CRISPR-Local
Find 171 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGTCCATTGAATGCTGTTTC+TGG | 0.148564 | 1.2:-50288840 | None:intergenic |
| GGCTACAACAATTCTATTAT+TGG | 0.202521 | 1.2:+50289987 | MS.gene30905:CDS |
| CTTTGTGTTGACTTGACATT+TGG | 0.212610 | 1.2:-50288296 | None:intergenic |
| ACATTTGGGCTCCTATCTTT+TGG | 0.249382 | 1.2:-50288281 | None:intergenic |
| TGCTGCACAGGCGTCGAATT+TGG | 0.249460 | 1.2:+50289830 | MS.gene30905:CDS |
| ACAACAATGTTGAAGAAAAT+TGG | 0.253316 | 1.2:+50290071 | MS.gene30905:CDS |
| GGAATCACAGCGGCAACTTC+TGG | 0.253438 | 1.2:+50288726 | MS.gene30905:CDS |
| TCTAGAAGAACGGAACAAAT+AGG | 0.282502 | 1.2:+50288551 | MS.gene30905:intron |
| AACAAATAGGGTACAAGAAT+TGG | 0.301512 | 1.2:+50288564 | MS.gene30905:CDS |
| TTAAAATGTACCTCAGATAT+TGG | 0.304349 | 1.2:-50288320 | None:intergenic |
| ATTTGAAGGAGATTTCTTTC+GGG | 0.319999 | 1.2:-50288177 | None:intergenic |
| TGAGTTGAAGGCAAGATTAT+TGG | 0.325711 | 1.2:+50289587 | MS.gene30905:CDS |
| AATTCGCTCATCTTCAGAAT+TGG | 0.329594 | 1.2:-50288755 | None:intergenic |
| TGGAGCTAGAGGCTGAATTA+AGG | 0.329640 | 1.2:+50289850 | MS.gene30905:CDS |
| TTCTAATCTGCAATGTGCTT+TGG | 0.333283 | 1.2:-50289413 | None:intergenic |
| GAGCAAACTTCAGGAGGATT+TGG | 0.333490 | 1.2:+50289230 | MS.gene30905:CDS |
| GATTTGAAGGAGATTTCTTT+CGG | 0.346603 | 1.2:-50288178 | None:intergenic |
| GCTGCTGCTATGATTTCTTC+TGG | 0.352673 | 1.2:+50289918 | MS.gene30905:CDS |
| AGAGTTAAGGGCACAATTGA+TGG | 0.353098 | 1.2:+50289530 | MS.gene30905:CDS |
| CTGACTCAGCATTGTCAATC+CGG | 0.380906 | 1.2:-50288942 | None:intergenic |
| AAGCCGATGTTGAAGAGTTA+AGG | 0.383364 | 1.2:+50289517 | MS.gene30905:CDS |
| TTTGTGTTGACTTGACATTT+GGG | 0.392895 | 1.2:-50288295 | None:intergenic |
| CTTTAGAGTTAGAGAAATCA+AGG | 0.395892 | 1.2:+50289178 | MS.gene30905:CDS |
| CAAATAAAACTCCAAAAGAT+AGG | 0.409278 | 1.2:+50288270 | MS.gene30905:CDS |
| GGAACTTGTGAGCAAACTTC+AGG | 0.419432 | 1.2:+50289221 | MS.gene30905:CDS |
| TCATCAGTTTCTTCTGCATA+AGG | 0.424746 | 1.2:-50290026 | None:intergenic |
| GAGGATTTGGTCAGTGGAGT+TGG | 0.426678 | 1.2:+50289243 | MS.gene30905:CDS |
| ATCTCCTCGCTTACCTGCAT+TGG | 0.427114 | 1.2:+50289269 | MS.gene30905:CDS |
| CTAGAAGAACGGAACAAATA+GGG | 0.430567 | 1.2:+50288552 | MS.gene30905:intron |
| AGAACTAAGGAAAATTTCTC+AGG | 0.434914 | 1.2:+50288780 | MS.gene30905:CDS |
| GTGAGCAGAAATGGTGCATC+AGG | 0.435653 | 1.2:+50288149 | MS.gene30905:intron |
| ACGACTGGAGAACACGAAAT+CGG | 0.446862 | 1.2:+50289446 | MS.gene30905:CDS |
| TTGCTTCCGCTGAGGCAGCA+AGG | 0.447445 | 1.2:+50289712 | MS.gene30905:CDS |
| GTGGAAACGCTCCGATTAGA+AGG | 0.448481 | 1.2:+50289123 | MS.gene30905:CDS |
| ATTGTCAATCCGGGTAGCTT+CGG | 0.452103 | 1.2:-50288932 | None:intergenic |
| CGAGCAGTCCGAGGATTTGA+AGG | 0.453421 | 1.2:-50288191 | None:intergenic |
| ATGCTGAGATTCAAGATTTG+AGG | 0.457146 | 1.2:+50288968 | MS.gene30905:CDS |
| AGCCGATGTTGAAGAGTTAA+GGG | 0.459023 | 1.2:+50289518 | MS.gene30905:CDS |
| TTTATCCATGTCAAGAGAGT+TGG | 0.461170 | 1.2:+50288702 | MS.gene30905:CDS |
| GCTCGCAAGACGAAGTCATC+AGG | 0.465959 | 1.2:+50288209 | MS.gene30905:CDS |
| GTTTCAGTTAAAGCTGAAGC+AGG | 0.470076 | 1.2:+50289336 | MS.gene30905:CDS |
| TAGTACAACTCAAATGCAAT+TGG | 0.474267 | 1.2:+50289083 | MS.gene30905:CDS |
| AGAATCTGAATCACAGGCAT+TGG | 0.474276 | 1.2:+50289053 | MS.gene30905:CDS |
| ATCCATGTCAAGAGAGTTGG+AGG | 0.474312 | 1.2:+50288705 | MS.gene30905:CDS |
| CAGTTACACGTGCTATCATT+CGG | 0.476141 | 1.2:-50289797 | None:intergenic |
| AGCAAGGGCCGCAGAGCGAG+AGG | 0.479702 | 1.2:+50289728 | MS.gene30905:CDS |
| TGCTTCCGCTGAGGCAGCAA+GGG | 0.480232 | 1.2:+50289713 | MS.gene30905:CDS |
| AGAGAACAATACACTTAAGA+TGG | 0.481927 | 1.2:+50289641 | MS.gene30905:CDS |
| CGTGTTCTCCAGTCGTTCAA+AGG | 0.483336 | 1.2:-50289439 | None:intergenic |
| TAGAAGTGCCTTTGAACGAC+TGG | 0.486503 | 1.2:+50289431 | MS.gene30905:CDS |
| ACTGAAAATGCAACTTGAAA+GGG | 0.492360 | 1.2:+50288900 | MS.gene30905:CDS |
| CAGACTGCCATTCTCGATCT+CGG | 0.499415 | 1.2:-50288804 | None:intergenic |
| TGCCCTTAACTCTTCAACAT+CGG | 0.502854 | 1.2:-50289520 | None:intergenic |
| AAACAAGCTCGGCTTTGAGC+CGG | 0.506146 | 1.2:-50289317 | None:intergenic |
| TTTCTCTAACTCTAAAGCTA+AGG | 0.508714 | 1.2:-50289172 | None:intergenic |
| AAGACAAGCTGAATTATATG+AGG | 0.509050 | 1.2:+50289479 | MS.gene30905:CDS |
| TGCGGCCCTTGCTGCCTCAG+CGG | 0.514799 | 1.2:-50289718 | None:intergenic |
| AGCTTTAACTGAAACAAGCT+CGG | 0.514900 | 1.2:-50289328 | None:intergenic |
| TAGAAAGCGAGGAGATAAAC+CGG | 0.516380 | 1.2:+50289298 | MS.gene30905:CDS |
| TAGTGATGTGGCTGAGTTGA+AGG | 0.519057 | 1.2:+50289575 | MS.gene30905:CDS |
| CTCAGGACCGAGATCGAGAA+TGG | 0.519589 | 1.2:+50288797 | MS.gene30905:CDS |
| CTTTCTACAACTTCCAATGC+AGG | 0.520191 | 1.2:-50289282 | None:intergenic |
| AACTGAAAATGCAACTTGAA+AGG | 0.523112 | 1.2:+50288899 | MS.gene30905:CDS |
| CTTCAGGAGGATTTGGTCAG+TGG | 0.532629 | 1.2:+50289237 | MS.gene30905:CDS |
| ATGAGCGAATTCAAGAACTA+AGG | 0.533335 | 1.2:+50288767 | MS.gene30905:CDS |
| AGGCTGAAGATGCAAAGAAT+CGG | 0.535803 | 1.2:+50288677 | MS.gene30905:CDS |
| CACGTGAATCCGAAGCTACC+CGG | 0.535832 | 1.2:+50288923 | MS.gene30905:CDS |
| GAAGAATAAAATCACGGATG+AGG | 0.536894 | 1.2:+50289686 | MS.gene30905:CDS |
| TGAAAGTTCAGTCAGATCAA+TGG | 0.538570 | 1.2:+50289877 | MS.gene30905:CDS |
| AGAAATCTCCTTCAAATCCT+CGG | 0.539368 | 1.2:+50288183 | MS.gene30905:CDS |
| CTAACTCTAAAGCTAAGGAT+TGG | 0.544112 | 1.2:-50289167 | None:intergenic |
| ATTTCTTCTGGAAACAACAA+TGG | 0.545987 | 1.2:+50289930 | MS.gene30905:CDS |
| TTGTAGAGAATCTGAATCAC+AGG | 0.546987 | 1.2:+50289047 | MS.gene30905:CDS |
| TTATTTGCTGGGTTTGAAGA+CGG | 0.550271 | 1.2:-50288254 | None:intergenic |
| AAGGTCTCAAGTAAACTCAC+TGG | 0.551394 | 1.2:+50289197 | MS.gene30905:CDS |
| TGAGGAGTTAGATGCTGCAC+AGG | 0.555058 | 1.2:+50289818 | MS.gene30905:CDS |
| TTTGTCTACCTCTAGAAGAA+CGG | 0.558111 | 1.2:+50288541 | MS.gene30905:intron |
| TGTCCAGAAACAGCATTCAA+TGG | 0.563463 | 1.2:+50288837 | MS.gene30905:CDS |
| ATCTGCATTGGATGCTGCCG+AGG | 0.566446 | 1.2:+50289368 | MS.gene30905:CDS |
| TAAGATGGAAATAAAGAGAG+AGG | 0.579267 | 1.2:+50289656 | MS.gene30905:CDS |
| TGACTCAGCATTGTCAATCC+GGG | 0.580031 | 1.2:-50288941 | None:intergenic |
| AGGGCAGTTAAAATCTGCAT+TGG | 0.583728 | 1.2:+50289356 | MS.gene30905:CDS |
| TGAAGAAAATTGGAGTGTTG+TGG | 0.584300 | 1.2:+50290081 | MS.gene30905:CDS |
| TTCGTCTTGCGAGCAGTCCG+AGG | 0.602923 | 1.2:-50288200 | None:intergenic |
| GTTAGAGAAGAATAAAATCA+CGG | 0.606698 | 1.2:+50289680 | MS.gene30905:CDS |
| TTCCTCCAACTCTCTTGACA+TGG | 0.607195 | 1.2:-50288707 | None:intergenic |
| GGGTACAAGAATTGGAGTCT+CGG | 0.608303 | 1.2:+50288572 | MS.gene30905:CDS |
| GGCGTCGAATTTGGAGCTAG+AGG | 0.618660 | 1.2:+50289839 | MS.gene30905:CDS |
| GTGATTCAGATTCTCTACAA+TGG | 0.621611 | 1.2:-50289044 | None:intergenic |
| CTCGTTCTGATATCTTACCT+CGG | 0.626347 | 1.2:-50289385 | None:intergenic |
| AGAATGGCAGTCTGAACTAG+AGG | 0.628151 | 1.2:+50288813 | MS.gene30905:CDS |
| ACTTGTGAGCAAACTTCAGG+AGG | 0.628772 | 1.2:+50289224 | MS.gene30905:CDS |
| TTTGAAGGAGATTTCTTTCG+GGG | 0.632584 | 1.2:-50288176 | None:intergenic |
| ACTTCCAATGCAGGTAAGCG+AGG | 0.632899 | 1.2:-50289273 | None:intergenic |
| TGAGATTCAAGATTTGAGGA+TGG | 0.636578 | 1.2:+50288972 | MS.gene30905:CDS |
| GTCTCAAGTAAACTCACTGG+AGG | 0.639006 | 1.2:+50289200 | MS.gene30905:CDS |
| TGAGGCTGTTGCTTCCGCTG+AGG | 0.639415 | 1.2:+50289704 | MS.gene30905:CDS |
| GAAGATAAAAGCTCAACATG+AGG | 0.639716 | 1.2:+50288657 | MS.gene30905:CDS |
| TTTCAGTTAAAGCTGAAGCA+GGG | 0.641574 | 1.2:+50289337 | MS.gene30905:CDS |
| AACACAAAGTCCAATATCTG+AGG | 0.651330 | 1.2:+50288310 | MS.gene30905:CDS |
| AAGTTCAGTCAGATCAATGG+AGG | 0.671435 | 1.2:+50289880 | MS.gene30905:CDS |
| AATGATAGCACGTGTAACTG+AGG | 0.673722 | 1.2:+50289800 | MS.gene30905:CDS |
| ATTGGAAGTTGTAGAAAGCG+AGG | 0.674711 | 1.2:+50289287 | MS.gene30905:CDS |
| TGGGTTTGAAGACGGCGAAG+CGG | 0.677416 | 1.2:-50288246 | None:intergenic |
| GGAAGCTGCAAATAAGACAG+TGG | 0.693575 | 1.2:+50289104 | MS.gene30905:CDS |
| TGTCAAAGCCTCTCGCTCTG+CGG | 0.698809 | 1.2:-50289736 | None:intergenic |
| AGAACTGGTTCACTTGACAG+TGG | 0.718014 | 1.2:+50289966 | MS.gene30905:CDS |
| TCATTTGCAAGATAGTGATG+TGG | 0.731331 | 1.2:+50289563 | MS.gene30905:CDS |
| GAGAGTTGGAGGAATCACAG+CGG | 0.814737 | 1.2:+50288716 | MS.gene30905:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTATACATTCTATTTAA+TGG | - | chr1.2:50287744-50287763 | None:intergenic | 10.0% |
| !!! | TTCAGATTTTTTTAAAAAAA+AGG | - | chr1.2:50287572-50287591 | None:intergenic | 10.0% |
| !! | AAACAATTGTAAATATTTCT+GGG | + | chr1.2:50287687-50287706 | MS.gene30905:intron | 15.0% |
| !! | AAACAACAATGGAAAAATTA+TGG | + | chr1.2:50289941-50289960 | MS.gene30905:CDS | 20.0% |
| !! | CAAACAATTGTAAATATTTC+TGG | + | chr1.2:50287686-50287705 | MS.gene30905:intron | 20.0% |
| !! | TCCTGTTTATGAAAAATATT+TGG | + | chr1.2:50287891-50287910 | MS.gene30905:intron | 20.0% |
| !! | TGGTTGTACTATAATTTATA+AGG | + | chr1.2:50287538-50287557 | MS.gene30905:intron | 20.0% |
| !!! | ATTATTTCTTCAGATTTCTT+TGG | - | chr1.2:50287782-50287801 | None:intergenic | 20.0% |
| !!! | ATTGTTGTATTTTTCTTCTT+AGG | - | chr1.2:50290059-50290078 | None:intergenic | 20.0% |
| !!! | TTTTCTTATAAGTAGTGAAT+AGG | - | chr1.2:50287839-50287858 | None:intergenic | 20.0% |
| ! | AATTATATAGGGTCTAAATG+AGG | + | chr1.2:50287484-50287503 | MS.gene30905:intron | 25.0% |
| ! | AATTGCAAAGATGAAAAATG+AGG | + | chr1.2:50289017-50289036 | MS.gene30905:CDS | 25.0% |
| ! | AATTTACACATATCACAATG+AGG | - | chr1.2:50288066-50288085 | None:intergenic | 25.0% |
| ! | ACAACAATGTTGAAGAAAAT+TGG | + | chr1.2:50290071-50290090 | MS.gene30905:CDS | 25.0% |
| ! | ATTATATAGGGTCTAAATGA+GGG | + | chr1.2:50287485-50287504 | MS.gene30905:intron | 25.0% |
| ! | CAAATAAAACTCCAAAAGAT+AGG | + | chr1.2:50288270-50288289 | MS.gene30905:CDS | 25.0% |
| ! | GAAATTACCAATAATCACAA+TGG | - | chr1.2:50288371-50288390 | None:intergenic | 25.0% |
| ! | GGAATAAATAACTAGATACT+TGG | + | chr1.2:50288402-50288421 | MS.gene30905:intron | 25.0% |
| ! | GTCTTCAGTCAAATTATATA+GGG | + | chr1.2:50287473-50287492 | MS.gene30905:intron | 25.0% |
| ! | GTTAGAGAAGAATAAAATCA+CGG | + | chr1.2:50289680-50289699 | MS.gene30905:CDS | 25.0% |
| ! | TATATAATTTGACTGAAGAC+AGG | - | chr1.2:50287473-50287492 | None:intergenic | 25.0% |
| ! | TCAATTCCATGAATACAAAT+AGG | - | chr1.2:50287607-50287626 | None:intergenic | 25.0% |
| ! | TCACTACTTATAAGAAAACT+AGG | + | chr1.2:50287841-50287860 | MS.gene30905:intron | 25.0% |
| ! | TGCAAATTTCTTGAATAGAA+TGG | - | chr1.2:50288006-50288025 | None:intergenic | 25.0% |
| ! | TGTCTTCAGTCAAATTATAT+AGG | + | chr1.2:50287472-50287491 | MS.gene30905:intron | 25.0% |
| ! | TTAAAATGTACCTCAGATAT+TGG | - | chr1.2:50288323-50288342 | None:intergenic | 25.0% |
| !! | AAATATTGTCGTTTCATAGA+AGG | - | chr1.2:50287929-50287948 | None:intergenic | 25.0% |
| !! | AATATTGTCGTTTCATAGAA+GGG | - | chr1.2:50287928-50287947 | None:intergenic | 25.0% |
| !! | CTATGAAACGACAATATTTT+GGG | + | chr1.2:50287930-50287949 | MS.gene30905:intron | 25.0% |
| !! | GCCAAATATTTTTCATAAAC+AGG | - | chr1.2:50287895-50287914 | None:intergenic | 25.0% |
| !! | TAAGCATGTTGATTGAAATA+TGG | + | chr1.2:50288120-50288139 | MS.gene30905:intron | 25.0% |
| !! | TCTATGAAACGACAATATTT+TGG | + | chr1.2:50287929-50287948 | MS.gene30905:intron | 25.0% |
| !! | TGTGATTATTGGTAATTTCA+TGG | + | chr1.2:50288372-50288391 | MS.gene30905:intron | 25.0% |
| !!! | CTTATTTTATTCAGTAGGTT+TGG | + | chr1.2:50287518-50287537 | MS.gene30905:intron | 25.0% |
| !!! | TTGCTCTTATTTTATTCAGT+AGG | + | chr1.2:50287513-50287532 | MS.gene30905:intron | 25.0% |
| AACAAATAGGGTACAAGAAT+TGG | + | chr1.2:50288564-50288583 | MS.gene30905:CDS | 30.0% | |
| AACTGAAAATGCAACTTGAA+AGG | + | chr1.2:50288899-50288918 | MS.gene30905:CDS | 30.0% | |
| AAGACAAGCTGAATTATATG+AGG | + | chr1.2:50289479-50289498 | MS.gene30905:CDS | 30.0% | |
| ACTCCTTGTAAGTCATATTT+CGG | + | chr1.2:50287639-50287658 | MS.gene30905:intron | 30.0% | |
| ACTGAAAATGCAACTTGAAA+GGG | + | chr1.2:50288900-50288919 | MS.gene30905:CDS | 30.0% | |
| AGAACTAAGGAAAATTTCTC+AGG | + | chr1.2:50288780-50288799 | MS.gene30905:CDS | 30.0% | |
| AGAGAACAATACACTTAAGA+TGG | + | chr1.2:50289641-50289660 | MS.gene30905:CDS | 30.0% | |
| ATCTACACAAGAAGAGTTAT+AGG | - | chr1.2:50287982-50288001 | None:intergenic | 30.0% | |
| ATTTGAAGGAGATTTCTTTC+GGG | - | chr1.2:50288180-50288199 | None:intergenic | 30.0% | |
| GATTTGAAGGAGATTTCTTT+CGG | - | chr1.2:50288181-50288200 | None:intergenic | 30.0% | |
| GGCTACAACAATTCTATTAT+TGG | + | chr1.2:50289987-50290006 | MS.gene30905:CDS | 30.0% | |
| TAAGATGGAAATAAAGAGAG+AGG | + | chr1.2:50289656-50289675 | MS.gene30905:CDS | 30.0% | |
| TAGAGGCAATATATTCATGA+AGG | - | chr1.2:50288443-50288462 | None:intergenic | 30.0% | |
| TAGTACAACTCAAATGCAAT+TGG | + | chr1.2:50289083-50289102 | MS.gene30905:CDS | 30.0% | |
| TTACCACAATATGATTCATC+AGG | - | chr1.2:50287810-50287829 | None:intergenic | 30.0% | |
| TTACCGAAATATGACTTACA+AGG | - | chr1.2:50287645-50287664 | None:intergenic | 30.0% | |
| TTTGAGCCTATTTGTATTCA+TGG | + | chr1.2:50287598-50287617 | MS.gene30905:intron | 30.0% | |
| ! | AGCTTTTATCTTCAATGACT+CGG | - | chr1.2:50288650-50288669 | None:intergenic | 30.0% |
| ! | ATGCTGCAAAAGTATGAAAT+AGG | - | chr1.2:50287438-50287457 | None:intergenic | 30.0% |
| ! | ATTTCTTCTGGAAACAACAA+TGG | + | chr1.2:50289930-50289949 | MS.gene30905:CDS | 30.0% |
| ! | CATGTTGATTGAAATATGGT+TGG | + | chr1.2:50288124-50288143 | MS.gene30905:intron | 30.0% |
| ! | CATTCTATTTAATGGACCAA+AGG | - | chr1.2:50287736-50287755 | None:intergenic | 30.0% |
| !! | ATATTTCTGGGATCTAATTG+AGG | + | chr1.2:50287699-50287718 | MS.gene30905:intron | 30.0% |
| !! | CTTTAGAGTTAGAGAAATCA+AGG | + | chr1.2:50289178-50289197 | MS.gene30905:CDS | 30.0% |
| !! | GGATTGTCTTGTTTCTTTAT+TGG | + | chr1.2:50287955-50287974 | MS.gene30905:intron | 30.0% |
| !! | TTAGATTTTGCTATGCATAG+AGG | - | chr1.2:50288460-50288479 | None:intergenic | 30.0% |
| !! | TTTCTCTAACTCTAAAGCTA+AGG | - | chr1.2:50289175-50289194 | None:intergenic | 30.0% |
| !! | TTTGTGTTGACTTGACATTT+GGG | - | chr1.2:50288298-50288317 | None:intergenic | 30.0% |
| !!! | CTTTTGGAGTTTTATTTGCT+GGG | - | chr1.2:50288268-50288287 | None:intergenic | 30.0% |
| !!! | TCTTTTGGAGTTTTATTTGC+TGG | - | chr1.2:50288269-50288288 | None:intergenic | 30.0% |
| AACACAAAGTCCAATATCTG+AGG | + | chr1.2:50288310-50288329 | MS.gene30905:CDS | 35.0% | |
| AATAATCACAATGGCACCAA+AGG | - | chr1.2:50288362-50288381 | None:intergenic | 35.0% | |
| AATTCGCTCATCTTCAGAAT+TGG | - | chr1.2:50288758-50288777 | None:intergenic | 35.0% | |
| AGAAATCTCCTTCAAATCCT+CGG | + | chr1.2:50288183-50288202 | MS.gene30905:CDS | 35.0% | |
| AGAGGTAGACAAAAATGTCA+AGG | - | chr1.2:50288534-50288553 | None:intergenic | 35.0% | |
| ATGAGCGAATTCAAGAACTA+AGG | + | chr1.2:50288767-50288786 | MS.gene30905:CDS | 35.0% | |
| ATGCTGAGATTCAAGATTTG+AGG | + | chr1.2:50288968-50288987 | MS.gene30905:CDS | 35.0% | |
| CTAGAAGAACGGAACAAATA+GGG | + | chr1.2:50288552-50288571 | MS.gene30905:intron | 35.0% | |
| GAAGAATAAAATCACGGATG+AGG | + | chr1.2:50289686-50289705 | MS.gene30905:CDS | 35.0% | |
| GAAGATAAAAGCTCAACATG+AGG | + | chr1.2:50288657-50288676 | MS.gene30905:CDS | 35.0% | |
| GGAAAAATTATGGAGAGAAC+TGG | + | chr1.2:50289951-50289970 | MS.gene30905:CDS | 35.0% | |
| GTGATTCAGATTCTCTACAA+TGG | - | chr1.2:50289047-50289066 | None:intergenic | 35.0% | |
| GTTCCTATAAGACTTACCTT+TGG | + | chr1.2:50288343-50288362 | MS.gene30905:intron | 35.0% | |
| TATTTGTTCCGTTCTTCTAG+AGG | - | chr1.2:50288552-50288571 | None:intergenic | 35.0% | |
| TCATCAGTTTCTTCTGCATA+AGG | - | chr1.2:50290029-50290048 | None:intergenic | 35.0% | |
| TCATTTGCAAGATAGTGATG+TGG | + | chr1.2:50289563-50289582 | MS.gene30905:CDS | 35.0% | |
| TCTAGAAGAACGGAACAAAT+AGG | + | chr1.2:50288551-50288570 | MS.gene30905:intron | 35.0% | |
| TGAAAGTTCAGTCAGATCAA+TGG | + | chr1.2:50289877-50289896 | MS.gene30905:CDS | 35.0% | |
| TGAGATTCAAGATTTGAGGA+TGG | + | chr1.2:50288972-50288991 | MS.gene30905:CDS | 35.0% | |
| TGGTAATTTCATGGATGCAT+TGG | + | chr1.2:50288381-50288400 | MS.gene30905:intron | 35.0% | |
| TGTCCTGATGAATCATATTG+TGG | + | chr1.2:50287804-50287823 | MS.gene30905:intron | 35.0% | |
| TTCTAATCTGCAATGTGCTT+TGG | - | chr1.2:50289416-50289435 | None:intergenic | 35.0% | |
| TTGTAGAGAATCTGAATCAC+AGG | + | chr1.2:50289047-50289066 | MS.gene30905:CDS | 35.0% | |
| TTTATCCATGTCAAGAGAGT+TGG | + | chr1.2:50288702-50288721 | MS.gene30905:CDS | 35.0% | |
| TTTCAGTTAAAGCTGAAGCA+GGG | + | chr1.2:50289337-50289356 | MS.gene30905:CDS | 35.0% | |
| TTTGAAGGAGATTTCTTTCG+GGG | - | chr1.2:50288179-50288198 | None:intergenic | 35.0% | |
| ! | AGCTTTAACTGAAACAAGCT+CGG | - | chr1.2:50289331-50289350 | None:intergenic | 35.0% |
| ! | CAAGTTGCATTTTCAGTTTC+TGG | - | chr1.2:50288897-50288916 | None:intergenic | 35.0% |
| ! | TGAGTTGAAGGCAAGATTAT+TGG | + | chr1.2:50289587-50289606 | MS.gene30905:CDS | 35.0% |
| ! | TTATTTGCTGGGTTTGAAGA+CGG | - | chr1.2:50288257-50288276 | None:intergenic | 35.0% |
| ! | TTTGTCTACCTCTAGAAGAA+CGG | + | chr1.2:50288541-50288560 | MS.gene30905:intron | 35.0% |
| !! | CTAACTCTAAAGCTAAGGAT+TGG | - | chr1.2:50289170-50289189 | None:intergenic | 35.0% |
| !! | CTTTGTGTTGACTTGACATT+TGG | - | chr1.2:50288299-50288318 | None:intergenic | 35.0% |
| !! | GAAACGACAATATTTTGGGA+AGG | + | chr1.2:50287934-50287953 | MS.gene30905:intron | 35.0% |
| !! | TGAAGAAAATTGGAGTGTTG+TGG | + | chr1.2:50290081-50290100 | MS.gene30905:CDS | 35.0% |
| !! | TTTGGTGCCATTGTGATTAT+TGG | + | chr1.2:50288361-50288380 | MS.gene30905:intron | 35.0% |
| AAGCCGATGTTGAAGAGTTA+AGG | + | chr1.2:50289517-50289536 | MS.gene30905:CDS | 40.0% | |
| AAGGTCTCAAGTAAACTCAC+TGG | + | chr1.2:50289197-50289216 | MS.gene30905:CDS | 40.0% | |
| AAGTTCAGTCAGATCAATGG+AGG | + | chr1.2:50289880-50289899 | MS.gene30905:CDS | 40.0% | |
| AATGATAGCACGTGTAACTG+AGG | + | chr1.2:50289800-50289819 | MS.gene30905:CDS | 40.0% | |
| ACTAGGCTTCTATGCATCAA+TGG | + | chr1.2:50287858-50287877 | MS.gene30905:intron | 40.0% | |
| AGAATCTGAATCACAGGCAT+TGG | + | chr1.2:50289053-50289072 | MS.gene30905:CDS | 40.0% | |
| AGCCGATGTTGAAGAGTTAA+GGG | + | chr1.2:50289518-50289537 | MS.gene30905:CDS | 40.0% | |
| AGGCTGAAGATGCAAAGAAT+CGG | + | chr1.2:50288677-50288696 | MS.gene30905:CDS | 40.0% | |
| AGGGCAGTTAAAATCTGCAT+TGG | + | chr1.2:50289356-50289375 | MS.gene30905:CDS | 40.0% | |
| ATTGGAAGTTGTAGAAAGCG+AGG | + | chr1.2:50289287-50289306 | MS.gene30905:CDS | 40.0% | |
| CAGACACAAAAAGCAAGGTA+AGG | + | chr1.2:50287408-50287427 | MS.gene30905:intron | 40.0% | |
| CAGTTACACGTGCTATCATT+CGG | - | chr1.2:50289800-50289819 | None:intergenic | 40.0% | |
| CTCGTTCTGATATCTTACCT+CGG | - | chr1.2:50289388-50289407 | None:intergenic | 40.0% | |
| CTTTCTACAACTTCCAATGC+AGG | - | chr1.2:50289285-50289304 | None:intergenic | 40.0% | |
| GTTTCAGTTAAAGCTGAAGC+AGG | + | chr1.2:50289336-50289355 | MS.gene30905:CDS | 40.0% | |
| TAGAAAGCGAGGAGATAAAC+CGG | + | chr1.2:50289298-50289317 | MS.gene30905:CDS | 40.0% | |
| TGAGGTATGAATGCTACCTT+TGG | + | chr1.2:50287717-50287736 | MS.gene30905:intron | 40.0% | |
| TGCCCTTAACTCTTCAACAT+CGG | - | chr1.2:50289523-50289542 | None:intergenic | 40.0% | |
| TGTCCAGAAACAGCATTCAA+TGG | + | chr1.2:50288837-50288856 | MS.gene30905:CDS | 40.0% | |
| ! | ACATTTGGGCTCCTATCTTT+TGG | - | chr1.2:50288284-50288303 | None:intergenic | 40.0% |
| ! | ACGCTTTTGCACCTTCTAAT+CGG | - | chr1.2:50289137-50289156 | None:intergenic | 40.0% |
| ! | AGAGTTAAGGGCACAATTGA+TGG | + | chr1.2:50289530-50289549 | MS.gene30905:CDS | 40.0% |
| ! | GCACCAAAGGTAAGTCTTAT+AGG | - | chr1.2:50288349-50288368 | None:intergenic | 40.0% |
| !! | AGTCCATTGAATGCTGTTTC+TGG | - | chr1.2:50288843-50288862 | None:intergenic | 40.0% |
| ACGACTGGAGAACACGAAAT+CGG | + | chr1.2:50289446-50289465 | MS.gene30905:CDS | 45.0% | |
| ACTTGTGAGCAAACTTCAGG+AGG | + | chr1.2:50289224-50289243 | MS.gene30905:CDS | 45.0% | |
| AGAATGGCAGTCTGAACTAG+AGG | + | chr1.2:50288813-50288832 | MS.gene30905:CDS | 45.0% | |
| ATCCATGTCAAGAGAGTTGG+AGG | + | chr1.2:50288705-50288724 | MS.gene30905:CDS | 45.0% | |
| ATTGTCAATCCGGGTAGCTT+CGG | - | chr1.2:50288935-50288954 | None:intergenic | 45.0% | |
| CTGACTCAGCATTGTCAATC+CGG | - | chr1.2:50288945-50288964 | None:intergenic | 45.0% | |
| GAGCAAACTTCAGGAGGATT+TGG | + | chr1.2:50289230-50289249 | MS.gene30905:CDS | 45.0% | |
| GCTGCTGCTATGATTTCTTC+TGG | + | chr1.2:50289918-50289937 | MS.gene30905:CDS | 45.0% | |
| GGAACTTGTGAGCAAACTTC+AGG | + | chr1.2:50289221-50289240 | MS.gene30905:CDS | 45.0% | |
| GGAAGCTGCAAATAAGACAG+TGG | + | chr1.2:50289104-50289123 | MS.gene30905:CDS | 45.0% | |
| GGGTACAAGAATTGGAGTCT+CGG | + | chr1.2:50288572-50288591 | MS.gene30905:CDS | 45.0% | |
| GTCTCAAGTAAACTCACTGG+AGG | + | chr1.2:50289200-50289219 | MS.gene30905:CDS | 45.0% | |
| TGACTCAGCATTGTCAATCC+GGG | - | chr1.2:50288944-50288963 | None:intergenic | 45.0% | |
| TGGAGCTAGAGGCTGAATTA+AGG | + | chr1.2:50289850-50289869 | MS.gene30905:CDS | 45.0% | |
| TTCCTCCAACTCTCTTGACA+TGG | - | chr1.2:50288710-50288729 | None:intergenic | 45.0% | |
| ! | AGAACTGGTTCACTTGACAG+TGG | + | chr1.2:50289966-50289985 | MS.gene30905:CDS | 45.0% |
| ! | TAGTGATGTGGCTGAGTTGA+AGG | + | chr1.2:50289575-50289594 | MS.gene30905:CDS | 45.0% |
| !! | TAGAAGTGCCTTTGAACGAC+TGG | + | chr1.2:50289431-50289450 | MS.gene30905:CDS | 45.0% |
| ACTTCCAATGCAGGTAAGCG+AGG | - | chr1.2:50289276-50289295 | None:intergenic | 50.0% | |
| ATCTCCTCGCTTACCTGCAT+TGG | + | chr1.2:50289269-50289288 | MS.gene30905:CDS | 50.0% | |
| CAGACTGCCATTCTCGATCT+CGG | - | chr1.2:50288807-50288826 | None:intergenic | 50.0% | |
| CGTGTTCTCCAGTCGTTCAA+AGG | - | chr1.2:50289442-50289461 | None:intergenic | 50.0% | |
| GAGAGTTGGAGGAATCACAG+CGG | + | chr1.2:50288716-50288735 | MS.gene30905:CDS | 50.0% | |
| GTGAGCAGAAATGGTGCATC+AGG | + | chr1.2:50288149-50288168 | MS.gene30905:intron | 50.0% | |
| GTGGAAACGCTCCGATTAGA+AGG | + | chr1.2:50289123-50289142 | MS.gene30905:CDS | 50.0% | |
| TGAGGAGTTAGATGCTGCAC+AGG | + | chr1.2:50289818-50289837 | MS.gene30905:CDS | 50.0% | |
| ! | CTTCAGGAGGATTTGGTCAG+TGG | + | chr1.2:50289237-50289256 | MS.gene30905:CDS | 50.0% |
| ! | GAGGATTTGGTCAGTGGAGT+TGG | + | chr1.2:50289243-50289262 | MS.gene30905:CDS | 50.0% |
| ! | TGGTTGGCTGTGAGCAGAAA+TGG | + | chr1.2:50288140-50288159 | MS.gene30905:intron | 50.0% |
| !! | AAACAAGCTCGGCTTTGAGC+CGG | - | chr1.2:50289320-50289339 | None:intergenic | 50.0% |
| ATCTGCATTGGATGCTGCCG+AGG | + | chr1.2:50289368-50289387 | MS.gene30905:CDS | 55.0% | |
| CACGTGAATCCGAAGCTACC+CGG | + | chr1.2:50288923-50288942 | MS.gene30905:CDS | 55.0% | |
| CGAGCAGTCCGAGGATTTGA+AGG | - | chr1.2:50288194-50288213 | None:intergenic | 55.0% | |
| CTCAGGACCGAGATCGAGAA+TGG | + | chr1.2:50288797-50288816 | MS.gene30905:CDS | 55.0% | |
| GCTCGCAAGACGAAGTCATC+AGG | + | chr1.2:50288209-50288228 | MS.gene30905:CDS | 55.0% | |
| GGAATCACAGCGGCAACTTC+TGG | + | chr1.2:50288726-50288745 | MS.gene30905:CDS | 55.0% | |
| TGGGTTTGAAGACGGCGAAG+CGG | - | chr1.2:50288249-50288268 | None:intergenic | 55.0% | |
| TGTCAAAGCCTCTCGCTCTG+CGG | - | chr1.2:50289739-50289758 | None:intergenic | 55.0% | |
| ! | GGCGTCGAATTTGGAGCTAG+AGG | + | chr1.2:50289839-50289858 | MS.gene30905:CDS | 55.0% |
| !! | TGCTGCACAGGCGTCGAATT+TGG | + | chr1.2:50289830-50289849 | MS.gene30905:CDS | 55.0% |
| TGCTTCCGCTGAGGCAGCAA+GGG | + | chr1.2:50289713-50289732 | MS.gene30905:CDS | 60.0% | |
| TTCGTCTTGCGAGCAGTCCG+AGG | - | chr1.2:50288203-50288222 | None:intergenic | 60.0% | |
| TTGCTTCCGCTGAGGCAGCA+AGG | + | chr1.2:50289712-50289731 | MS.gene30905:CDS | 60.0% | |
| ! | TGAGGCTGTTGCTTCCGCTG+AGG | + | chr1.2:50289704-50289723 | MS.gene30905:CDS | 60.0% |
| AGCAAGGGCCGCAGAGCGAG+AGG | + | chr1.2:50289728-50289747 | MS.gene30905:CDS | 70.0% | |
| TGCGGCCCTTGCTGCCTCAG+CGG | - | chr1.2:50289721-50289740 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 50287405 | 50290121 | 50287405 | ID=MS.gene30905 |
| chr1.2 | mRNA | 50287405 | 50290121 | 50287405 | ID=MS.gene30905.t1;Parent=MS.gene30905 |
| chr1.2 | exon | 50287405 | 50287424 | 50287405 | ID=MS.gene30905.t1.exon1;Parent=MS.gene30905.t1 |
| chr1.2 | CDS | 50287405 | 50287424 | 50287405 | ID=cds.MS.gene30905.t1;Parent=MS.gene30905.t1 |
| chr1.2 | exon | 50288157 | 50288331 | 50288157 | ID=MS.gene30905.t1.exon2;Parent=MS.gene30905.t1 |
| chr1.2 | CDS | 50288157 | 50288331 | 50288157 | ID=cds.MS.gene30905.t1;Parent=MS.gene30905.t1 |
| chr1.2 | exon | 50288556 | 50290121 | 50288556 | ID=MS.gene30905.t1.exon3;Parent=MS.gene30905.t1 |
| chr1.2 | CDS | 50288556 | 50290121 | 50288556 | ID=cds.MS.gene30905.t1;Parent=MS.gene30905.t1 |
| Gene Sequence |
| Protein sequence |
