Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55320.t1 | XP_003613950.2 | 96.4 | 334 | 12 | 0 | 1 | 334 | 1 | 334 | 1.80E-180 | 641.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55320.t1 | F4I241 | 53.4 | 305 | 141 | 1 | 16 | 320 | 11 | 314 | 4.3e-93 | 342.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55320.t1 | G7JWN6 | 96.4 | 334 | 12 | 0 | 1 | 334 | 1 | 334 | 1.3e-180 | 641.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene55320 | 0.807653 | 4.55E-50 | -1.69E-46 |
| MS.gene049435 | MS.gene55320 | 0.812083 | 5.07E-51 | -1.69E-46 |
| MS.gene050442 | MS.gene55320 | 0.834697 | 2.58E-56 | -1.69E-46 |
| MS.gene050719 | MS.gene55320 | 0.806691 | 7.27E-50 | -1.69E-46 |
| MS.gene050721 | MS.gene55320 | 0.804007 | 2.66E-49 | -1.69E-46 |
| MS.gene052012 | MS.gene55320 | 0.829823 | 4.15E-55 | -1.69E-46 |
| MS.gene060803 | MS.gene55320 | 0.813485 | 2.50E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene90774 | MS.gene55320 | PPI |
| MS.gene048337 | MS.gene55320 | PPI |
| MS.gene046944 | MS.gene55320 | PPI |
| MS.gene008905 | MS.gene55320 | PPI |
| MS.gene024963 | MS.gene55320 | PPI |
| MS.gene92360 | MS.gene55320 | PPI |
| MS.gene55320 | MS.gene40528 | PPI |
| MS.gene55320 | MS.gene065201 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55320.t1 | MTR_5g043000 | 96.407 | 334 | 12 | 0 | 1 | 334 | 1 | 334 | 0.0 | 662 |
| MS.gene55320.t1 | MTR_5g005120 | 37.037 | 324 | 196 | 5 | 8 | 325 | 11 | 332 | 7.50e-69 | 219 |
| MS.gene55320.t1 | MTR_7g033060 | 86.765 | 68 | 9 | 0 | 12 | 79 | 25 | 92 | 1.74e-32 | 116 |
| MS.gene55320.t1 | MTR_2g008410 | 27.217 | 327 | 210 | 12 | 9 | 318 | 17 | 332 | 3.92e-30 | 117 |
| MS.gene55320.t1 | MTR_8g068875 | 26.959 | 319 | 218 | 7 | 2 | 312 | 8 | 319 | 5.96e-30 | 117 |
| MS.gene55320.t1 | MTR_2g008410 | 26.087 | 322 | 202 | 10 | 9 | 318 | 17 | 314 | 1.60e-26 | 107 |
| MS.gene55320.t1 | MTR_1g492860 | 25.664 | 339 | 233 | 8 | 8 | 334 | 12 | 343 | 3.37e-26 | 107 |
| MS.gene55320.t1 | MTR_2g008410 | 27.481 | 262 | 169 | 10 | 67 | 318 | 17 | 267 | 3.29e-22 | 94.7 |
| MS.gene55320.t1 | MTR_2g008410 | 26.070 | 257 | 161 | 8 | 67 | 318 | 17 | 249 | 1.26e-18 | 84.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55320.t1 | AT1G69400 | 53.443 | 305 | 141 | 1 | 16 | 320 | 11 | 314 | 8.19e-117 | 340 |
| MS.gene55320.t1 | AT1G69400 | 49.569 | 232 | 116 | 1 | 16 | 247 | 11 | 241 | 1.20e-75 | 234 |
| MS.gene55320.t1 | AT1G49910 | 37.695 | 321 | 192 | 5 | 11 | 325 | 9 | 327 | 1.77e-73 | 231 |
| MS.gene55320.t1 | AT3G19590 | 37.730 | 326 | 195 | 6 | 6 | 325 | 5 | 328 | 9.34e-72 | 226 |
| MS.gene55320.t1 | AT1G80670 | 27.134 | 328 | 220 | 9 | 3 | 318 | 10 | 330 | 3.81e-31 | 120 |
Find 70 sgRNAs with CRISPR-Local
Find 304 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCTGACCATCCTTTGATTT+TGG | 0.181469 | 5.2:+32774711 | None:intergenic |
| GCAGGTCTGTTAATTACTTC+TGG | 0.226200 | 5.2:-32776323 | MS.gene55320:intron |
| AATCAACAATTTCTTTGATT+TGG | 0.234591 | 5.2:+32779014 | None:intergenic |
| GAATCTTCGTTTATACGATT+TGG | 0.245023 | 5.2:-32778822 | MS.gene55320:CDS |
| GGATGGACGGGTTGCGTTGC+AGG | 0.250415 | 5.2:-32775459 | MS.gene55320:CDS |
| TATAGGTATGACTTGCATTC+TGG | 0.273951 | 5.2:-32777416 | MS.gene55320:intron |
| CATGTCTGTCTCGGGGTTTA+AGG | 0.290281 | 5.2:-32776216 | MS.gene55320:CDS |
| ATTCGGTGCAAATTGAATTC+TGG | 0.294536 | 5.2:+32778972 | None:intergenic |
| CTGGAAATTGCGTCATTGAT+TGG | 0.299551 | 5.2:+32778991 | None:intergenic |
| CAAGGCTCCATTGACAGGTT+TGG | 0.364972 | 5.2:+32776137 | None:intergenic |
| ATAATTTCTATTAGTATGTC+TGG | 0.377820 | 5.2:-32774580 | MS.gene55320:intron |
| ACAACCTTCTCATTTCATCT+TGG | 0.384200 | 5.2:-32778945 | MS.gene55320:CDS |
| ATCCTTGTCTTACAACCATT+CGG | 0.387136 | 5.2:-32774343 | MS.gene55320:CDS |
| ATGAGAAGGTTGTTAGAATT+CGG | 0.387365 | 5.2:+32778955 | None:intergenic |
| CAACCTTCTCATTTCATCTT+GGG | 0.388828 | 5.2:-32778944 | MS.gene55320:CDS |
| GCTTTCTCTGTTGCTTCTGA+TGG | 0.394841 | 5.2:-32778722 | MS.gene55320:CDS |
| GATGACATGGCAACATGTAT+TGG | 0.408681 | 5.2:-32777368 | MS.gene55320:CDS |
| AAGTAACTTACATGTTTCAT+TGG | 0.411144 | 5.2:+32777340 | None:intergenic |
| ACGAAGGTTATGCTACCATA+TGG | 0.423142 | 5.2:-32774537 | MS.gene55320:CDS |
| TCCTTGTCTTACAACCATTC+GGG | 0.424268 | 5.2:-32774342 | MS.gene55320:CDS |
| AAAGGATGGTCAGCATCATT+TGG | 0.429051 | 5.2:-32774703 | MS.gene55320:CDS |
| CATTGCAAGGCTCCATTGAC+AGG | 0.429640 | 5.2:+32776132 | None:intergenic |
| ATTGACTCCATGTCTGTCTC+GGG | 0.434117 | 5.2:-32776224 | MS.gene55320:CDS |
| TCTGGAATTGTTGACTCAAT+GGG | 0.452206 | 5.2:-32777398 | MS.gene55320:CDS |
| CATCAAATTCGAATGACATT+GGG | 0.454646 | 5.2:-32775427 | MS.gene55320:intron |
| CCTACTTCTAGCATCCCATA+TGG | 0.464155 | 5.2:+32774522 | None:intergenic |
| TCAAGTGTTTATACATAAAG+TGG | 0.465769 | 5.2:-32774165 | MS.gene55320:CDS |
| TTTCTCAATTTCAGTTTCCC+AGG | 0.466397 | 5.2:-32774383 | MS.gene55320:intron |
| CAGTTGGATCAGTGGATGGA+CGG | 0.467705 | 5.2:-32775472 | MS.gene55320:CDS |
| TTGACAAGAAGTTATTATCA+TGG | 0.470217 | 5.2:-32776298 | MS.gene55320:CDS |
| CTTCTGATGGATTCATTCGA+AGG | 0.471299 | 5.2:-32778709 | MS.gene55320:intron |
| TGCAACACTATTTGAGTACC+TGG | 0.472971 | 5.2:+32774365 | None:intergenic |
| TTTAAGGTTACTGTAGGCAT+TGG | 0.475663 | 5.2:-32776200 | MS.gene55320:CDS |
| CGACAAACCAAACCTGTCAA+TGG | 0.476431 | 5.2:-32776144 | MS.gene55320:CDS |
| TTCTGGAATTGTTGACTCAA+TGG | 0.476624 | 5.2:-32777399 | MS.gene55320:CDS |
| GATTGACTCCATGTCTGTCT+CGG | 0.477649 | 5.2:-32776225 | MS.gene55320:CDS |
| TCATCAAATTCGAATGACAT+TGG | 0.478333 | 5.2:-32775428 | MS.gene55320:CDS |
| TGGTACATACCTTCTGCATA+AGG | 0.481320 | 5.2:+32776080 | None:intergenic |
| AAAGTGGACAACATTGATAT+CGG | 0.487576 | 5.2:-32774149 | MS.gene55320:CDS |
| TTTCTTGCAGGATTTGCAGT+TGG | 0.488184 | 5.2:-32775488 | MS.gene55320:intron |
| TGACAAGAAGTTATTATCAT+GGG | 0.507588 | 5.2:-32776297 | MS.gene55320:CDS |
| ATGTCTGGTGCATTTGTCAC+TGG | 0.544544 | 5.2:-32774565 | MS.gene55320:CDS |
| TCGGGGTTTAAGGTTACTGT+AGG | 0.551548 | 5.2:-32776206 | MS.gene55320:CDS |
| AGTTCAATTCCTTATGCAGA+AGG | 0.553343 | 5.2:-32776089 | MS.gene55320:intron |
| AAGTAGGAAAAGACTAATTG+AGG | 0.554607 | 5.2:-32774506 | MS.gene55320:intron |
| CGAAGGTTATGCTACCATAT+GGG | 0.555039 | 5.2:-32774536 | MS.gene55320:CDS |
| CTTAATTGTGTACCATTGCA+AGG | 0.556384 | 5.2:+32776119 | None:intergenic |
| ATACGATTTGGACGCTTCTG+TGG | 0.562700 | 5.2:-32778810 | MS.gene55320:CDS |
| CCATATGGGATGCTAGAAGT+AGG | 0.571549 | 5.2:-32774522 | MS.gene55320:CDS |
| TCTTGATTGTTGTTTCTCTG+AGG | 0.576939 | 5.2:-32778756 | MS.gene55320:CDS |
| ACTCTGACAGATATACGTTC+CGG | 0.578341 | 5.2:-32774740 | MS.gene55320:intron |
| TTTGCAGTTGGATCAGTGGA+TGG | 0.578867 | 5.2:-32775476 | MS.gene55320:CDS |
| CCGGTGTCATCCAAAATCAA+AGG | 0.586288 | 5.2:-32774721 | MS.gene55320:CDS |
| TCCCGAATGGTTGTAAGACA+AGG | 0.598890 | 5.2:+32774341 | None:intergenic |
| CTTAAACCCCGAGACAGACA+TGG | 0.605467 | 5.2:+32776217 | None:intergenic |
| CAGCTAGAAGCTGTCCCGAA+TGG | 0.610239 | 5.2:+32774328 | None:intergenic |
| AGTTGGATCAGTGGATGGAC+GGG | 0.611964 | 5.2:-32775471 | MS.gene55320:CDS |
| TTGACTCCATGTCTGTCTCG+GGG | 0.612513 | 5.2:-32776223 | MS.gene55320:CDS |
| CTGTCAATGGAGCCTTGCAA+TGG | 0.616655 | 5.2:-32776131 | MS.gene55320:CDS |
| AATGGGTAGTCACGATGACA+TGG | 0.618721 | 5.2:-32777381 | MS.gene55320:CDS |
| TCGGATCAAGTTCTGCTCGA+AGG | 0.619168 | 5.2:-32774130 | MS.gene55320:CDS |
| ACTTTATGTATAAACACTTG+AGG | 0.625298 | 5.2:+32774167 | None:intergenic |
| TGTCATCCAAAATCAAAGGA+TGG | 0.627782 | 5.2:-32774717 | MS.gene55320:CDS |
| TTATGTATAAACACTTGAGG+AGG | 0.628759 | 5.2:+32774170 | None:intergenic |
| AGTTGCGTAAATCATAAACA+TGG | 0.628890 | 5.2:+32776168 | None:intergenic |
| AGGATTTGCAGTTGGATCAG+TGG | 0.634576 | 5.2:-32775480 | MS.gene55320:CDS |
| TGTCCCAAGATGAAATGAGA+AGG | 0.640689 | 5.2:+32778941 | None:intergenic |
| TTTGTCACTGGTGATAACGA+AGG | 0.671951 | 5.2:-32774553 | MS.gene55320:CDS |
| GCAACACTATTTGAGTACCT+GGG | 0.674620 | 5.2:+32774366 | None:intergenic |
| AGAAGCAACAGAGAAAGCAA+CGG | 0.681074 | 5.2:+32778727 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATTTATAATAATTTAAA+TGG | + | chr5.2:32778535-32778554 | None:intergenic | 0.0% |
| !! | TTGTTAATAATTCTAAATTA+TGG | - | chr5.2:32778028-32778047 | MS.gene55320:intron | 10.0% |
| !! | AAATTGAGAAAAAAAAAAGA+TGG | + | chr5.2:32778765-32778784 | None:intergenic | 15.0% |
| !! | AATATACTACATTTATGATA+TGG | + | chr5.2:32776607-32776626 | None:intergenic | 15.0% |
| !! | ATATTTAAGTGATCTATTAT+TGG | - | chr5.2:32776124-32776143 | MS.gene55320:CDS | 15.0% |
| !! | ATCTATGTTAATTTAAATTG+AGG | - | chr5.2:32774574-32774593 | MS.gene55320:intron | 15.0% |
| !! | ATGATTAATAAATTCTGAAT+AGG | - | chr5.2:32776515-32776534 | MS.gene55320:intron | 15.0% |
| !! | CTATATTATATGGTAAAAAA+TGG | + | chr5.2:32775350-32775369 | None:intergenic | 15.0% |
| !! | TAACAATATAAAAAACATGT+TGG | - | chr5.2:32774713-32774732 | MS.gene55320:CDS | 15.0% |
| !! | TATTCATGAAAATTGAAAAA+TGG | + | chr5.2:32776340-32776359 | None:intergenic | 15.0% |
| !! | TCTATGTTAATTTAAATTGA+GGG | - | chr5.2:32774575-32774594 | MS.gene55320:intron | 15.0% |
| !! | TGATTAATAAATTCTGAATA+GGG | - | chr5.2:32776516-32776535 | MS.gene55320:intron | 15.0% |
| !! | TTTGTTAATATGATATTGAA+AGG | - | chr5.2:32776218-32776237 | MS.gene55320:CDS | 15.0% |
| !!! | ATACTTTTAAGAATATGATT+TGG | + | chr5.2:32776709-32776728 | None:intergenic | 15.0% |
| !!! | ATTTTCAAATTTGAGTTTAA+AGG | - | chr5.2:32775269-32775288 | MS.gene55320:intron | 15.0% |
| !!! | TGAATCAAAATATTTTATGT+TGG | - | chr5.2:32778338-32778357 | MS.gene55320:intron | 15.0% |
| !! | AAATGGAACAAATAAAAACA+AGG | + | chr5.2:32775857-32775876 | None:intergenic | 20.0% |
| !! | AAATTACTAATAAATGCAAC+TGG | + | chr5.2:32778146-32778165 | None:intergenic | 20.0% |
| !! | AATAAAAATTGTTTGGATGT+TGG | - | chr5.2:32776734-32776753 | MS.gene55320:intron | 20.0% |
| !! | AATCAACAATTTCTTTGATT+TGG | + | chr5.2:32774146-32774165 | None:intergenic | 20.0% |
| !! | AATTTGAAAAAAATGCTGTT+AGG | + | chr5.2:32775075-32775094 | None:intergenic | 20.0% |
| !! | ATAAAATAAGACAGATTTGA+TGG | + | chr5.2:32777100-32777119 | None:intergenic | 20.0% |
| !! | ATAATTTCTATTAGTATGTC+TGG | - | chr5.2:32778577-32778596 | MS.gene55320:intron | 20.0% |
| !! | ATCATAATATGAACTTTACA+GGG | + | chr5.2:32776804-32776823 | None:intergenic | 20.0% |
| !! | ATGATATTGAAAGGATATAT+TGG | - | chr5.2:32776227-32776246 | MS.gene55320:CDS | 20.0% |
| !! | ATGTAATGTATAATTACAAC+TGG | + | chr5.2:32776660-32776679 | None:intergenic | 20.0% |
| !! | ATTCTTCTAACAAAAAAGTA+TGG | - | chr5.2:32777303-32777322 | MS.gene55320:intron | 20.0% |
| !! | ATTTGAAAAAAATGCTGTTA+GGG | + | chr5.2:32775074-32775093 | None:intergenic | 20.0% |
| !! | CTTATAAGAGCTATATTATA+TGG | + | chr5.2:32775360-32775379 | None:intergenic | 20.0% |
| !! | GTATGCCTAATAATTATATT+AGG | + | chr5.2:32778119-32778138 | None:intergenic | 20.0% |
| !! | TGTAAAATAGTCATTAATGT+CGG | + | chr5.2:32774621-32774640 | None:intergenic | 20.0% |
| !!! | AAAACAAATTTAGTTTTGAG+AGG | + | chr5.2:32778313-32778332 | None:intergenic | 20.0% |
| !!! | ACTTTTTTGTTAGAAGAATA+GGG | + | chr5.2:32777302-32777321 | None:intergenic | 20.0% |
| !!! | ATAATGCACCTAATTTTTTT+GGG | + | chr5.2:32777805-32777824 | None:intergenic | 20.0% |
| !!! | TACTTTTTTGTTAGAAGAAT+AGG | + | chr5.2:32777303-32777322 | None:intergenic | 20.0% |
| !!! | TATAATGCACCTAATTTTTT+TGG | + | chr5.2:32777806-32777825 | None:intergenic | 20.0% |
| !!! | TATCTTATTTTTAGTTGCTT+GGG | - | chr5.2:32777547-32777566 | MS.gene55320:intron | 20.0% |
| !!! | TTATCTTATTTTTAGTTGCT+TGG | - | chr5.2:32777546-32777565 | MS.gene55320:intron | 20.0% |
| !!! | TTATTTTATTTTGTCAACCT+TGG | - | chr5.2:32777111-32777130 | MS.gene55320:intron | 20.0% |
| !!! | TTTTTATTTGTTCCATTTGT+TGG | - | chr5.2:32775859-32775878 | MS.gene55320:intron | 20.0% |
| ! | AACTAAACACAAATGAAACA+TGG | + | chr5.2:32778687-32778706 | None:intergenic | 25.0% |
| ! | AAGTAACTTACATGTTTCAT+TGG | + | chr5.2:32775820-32775839 | None:intergenic | 25.0% |
| ! | AATCATTAGAGAGAATGTTA+GGG | - | chr5.2:32775920-32775939 | MS.gene55320:intron | 25.0% |
| ! | ACTTTATGTATAAACACTTG+AGG | + | chr5.2:32778993-32779012 | None:intergenic | 25.0% |
| ! | ATATAAAACACTCTTGCATA+TGG | - | chr5.2:32777338-32777357 | MS.gene55320:intron | 25.0% |
| ! | ATTAAGACTGTGTAAGAAAT+TGG | + | chr5.2:32775125-32775144 | None:intergenic | 25.0% |
| ! | ATTTCTTACACAGTCTTAAT+CGG | - | chr5.2:32775125-32775144 | MS.gene55320:intron | 25.0% |
| ! | CCTATTCTTAACCTAATATT+GGG | - | chr5.2:32777224-32777243 | MS.gene55320:intron | 25.0% |
| ! | GAAAACTTTCTTAAACTTCA+TGG | + | chr5.2:32778926-32778945 | None:intergenic | 25.0% |
| ! | GATCATAATATGAACTTTAC+AGG | + | chr5.2:32776805-32776824 | None:intergenic | 25.0% |
| ! | GGAAAACCAAGAAAAAATAT+AGG | - | chr5.2:32776080-32776099 | MS.gene55320:intron | 25.0% |
| ! | GTTTAAATATCTGCATTCTA+AGG | - | chr5.2:32776423-32776442 | MS.gene55320:intron | 25.0% |
| ! | TACAGGGACATAATAAAATA+TGG | + | chr5.2:32776788-32776807 | None:intergenic | 25.0% |
| ! | TAGCAAATTATTAGAACATG+TGG | + | chr5.2:32778391-32778410 | None:intergenic | 25.0% |
| ! | TAGTCAAATGTTTATGCTAA+AGG | + | chr5.2:32776461-32776480 | None:intergenic | 25.0% |
| ! | TATTTAAACACAAAACACCA+AGG | + | chr5.2:32776412-32776431 | None:intergenic | 25.0% |
| ! | TCAAGTGTTTATACATAAAG+TGG | - | chr5.2:32778992-32779011 | MS.gene55320:CDS | 25.0% |
| ! | TGACAAGAAGTTATTATCAT+GGG | - | chr5.2:32776860-32776879 | MS.gene55320:intron | 25.0% |
| ! | TTAAATATGCATACGTGAAA+TGG | + | chr5.2:32777763-32777782 | None:intergenic | 25.0% |
| ! | TTGACAAGAAGTTATTATCA+TGG | - | chr5.2:32776859-32776878 | MS.gene55320:intron | 25.0% |
| !! | AACATGTTGCTATTAAGATT+TGG | - | chr5.2:32777134-32777153 | MS.gene55320:intron | 25.0% |
| !! | CTAATGAAATGACATTGATT+TGG | + | chr5.2:32774690-32774709 | None:intergenic | 25.0% |
| !! | TCTACAATTTTGTTAAACAG+CGG | - | chr5.2:32777933-32777952 | MS.gene55320:intron | 25.0% |
| !! | TGAAGTTTAAGAAAGTTTTC+TGG | - | chr5.2:32778926-32778945 | MS.gene55320:intron | 25.0% |
| !! | TTTTGAATTAGACTCTTAAC+AGG | + | chr5.2:32775197-32775216 | None:intergenic | 25.0% |
| !!! | ATGCTATTTGCATAGTTTTT+AGG | + | chr5.2:32777482-32777501 | None:intergenic | 25.0% |
| !!! | ATTGAATCGATTTTGTGTTT+TGG | - | chr5.2:32774305-32774324 | MS.gene55320:CDS | 25.0% |
| !!! | CTTTTTTGTTAGAAGAATAG+GGG | + | chr5.2:32777301-32777320 | None:intergenic | 25.0% |
| !!! | GACATTTATTTTGCTGAAAT+GGG | - | chr5.2:32774525-32774544 | MS.gene55320:CDS | 25.0% |
| !!! | TGACATTTATTTTGCTGAAA+TGG | - | chr5.2:32774524-32774543 | MS.gene55320:CDS | 25.0% |
| AAAACATGCATCATGATCAT+AGG | + | chr5.2:32775678-32775697 | None:intergenic | 30.0% | |
| AAACACAAATGAAACATGGT+AGG | + | chr5.2:32778683-32778702 | None:intergenic | 30.0% | |
| AAAGATCTTGTCAATCATGA+TGG | - | chr5.2:32775148-32775167 | MS.gene55320:intron | 30.0% | |
| AAAGTGGACAACATTGATAT+CGG | - | chr5.2:32779008-32779027 | MS.gene55320:CDS | 30.0% | |
| AAGTAGGAAAAGACTAATTG+AGG | - | chr5.2:32778651-32778670 | MS.gene55320:intron | 30.0% | |
| AATTCAATAACTAGCAGTAG+AGG | - | chr5.2:32776059-32776078 | MS.gene55320:intron | 30.0% | |
| ACAAATAAAAACAAGGAGCA+AGG | + | chr5.2:32775850-32775869 | None:intergenic | 30.0% | |
| AGTTGCGTAAATCATAAACA+TGG | + | chr5.2:32776992-32777011 | None:intergenic | 30.0% | |
| ATAAGAGTAGTAGGAAAGAT+AGG | + | chr5.2:32776282-32776301 | None:intergenic | 30.0% | |
| ATGAGAAGGTTGTTAGAATT+CGG | + | chr5.2:32774205-32774224 | None:intergenic | 30.0% | |
| ATTATGATCATGATTGTTGC+AGG | - | chr5.2:32776816-32776835 | MS.gene55320:intron | 30.0% | |
| ATTGTCCTTCATAGTTCATA+TGG | + | chr5.2:32776042-32776061 | None:intergenic | 30.0% | |
| CAATCATTAGAGAGAATGTT+AGG | - | chr5.2:32775919-32775938 | MS.gene55320:intron | 30.0% | |
| CATCAAATTCGAATGACATT+GGG | - | chr5.2:32777730-32777749 | MS.gene55320:intron | 30.0% | |
| CCCAATATTAGGTTAAGAAT+AGG | + | chr5.2:32777227-32777246 | None:intergenic | 30.0% | |
| CCTATAAATTTCAGCTTAAC+AGG | + | chr5.2:32775727-32775746 | None:intergenic | 30.0% | |
| CCTGTTAAGCTGAAATTTAT+AGG | - | chr5.2:32775724-32775743 | MS.gene55320:intron | 30.0% | |
| CTCTGTAAGGAACAAAATAA+AGG | + | chr5.2:32778962-32778981 | None:intergenic | 30.0% | |
| GAATCTCACTAAAAACATAG+GGG | - | chr5.2:32774735-32774754 | MS.gene55320:intron | 30.0% | |
| GAATCTTCGTTTATACGATT+TGG | - | chr5.2:32774335-32774354 | MS.gene55320:CDS | 30.0% | |
| GCCTATTCTTAACCTAATAT+TGG | - | chr5.2:32777223-32777242 | MS.gene55320:intron | 30.0% | |
| GGAATCTCACTAAAAACATA+GGG | - | chr5.2:32774734-32774753 | MS.gene55320:intron | 30.0% | |
| GGAGCACAAATGAAATAAAA+AGG | - | chr5.2:32776537-32776556 | MS.gene55320:intron | 30.0% | |
| GGGAATGACTAAATCTATTT+GGG | - | chr5.2:32774986-32775005 | MS.gene55320:intron | 30.0% | |
| GTAAGGAACAAAATAAAGGT+TGG | + | chr5.2:32778958-32778977 | None:intergenic | 30.0% | |
| GTTTAAAGGACATGCATTAT+CGG | - | chr5.2:32775283-32775302 | MS.gene55320:intron | 30.0% | |
| TACATTTATGATATGGCAAG+TGG | + | chr5.2:32776600-32776619 | None:intergenic | 30.0% | |
| TCATCAAATTCGAATGACAT+TGG | - | chr5.2:32777729-32777748 | MS.gene55320:intron | 30.0% | |
| TGATAAGATGAAACATACAG+TGG | + | chr5.2:32778506-32778525 | None:intergenic | 30.0% | |
| TGGAATCTCACTAAAAACAT+AGG | - | chr5.2:32774733-32774752 | MS.gene55320:CDS | 30.0% | |
| TGGGAATGACTAAATCTATT+TGG | - | chr5.2:32774985-32775004 | MS.gene55320:intron | 30.0% | |
| TTAAATATCCCACGTAGTAT+CGG | + | chr5.2:32777577-32777596 | None:intergenic | 30.0% | |
| TTATGTATAAACACTTGAGG+AGG | + | chr5.2:32778990-32779009 | None:intergenic | 30.0% | |
| TTTCAAATGCACAACATACA+AGG | - | chr5.2:32777980-32777999 | MS.gene55320:intron | 30.0% | |
| ! | ACATGGATTTTATCAATGCT+AGG | + | chr5.2:32775602-32775621 | None:intergenic | 30.0% |
| ! | AGACTTTGAAAAAGTTCTCA+AGG | + | chr5.2:32777527-32777546 | None:intergenic | 30.0% |
| ! | ATAGTAGAGTCTTGTCTTAA+AGG | - | chr5.2:32775963-32775982 | MS.gene55320:intron | 30.0% |
| ! | TAGTAGAGTCTTGTCTTAAA+GGG | - | chr5.2:32775964-32775983 | MS.gene55320:intron | 30.0% |
| ! | TGTGTAAACTATCTTTTGAC+TGG | - | chr5.2:32775520-32775539 | MS.gene55320:intron | 30.0% |
| !! | AGCATTGATAAAATCCATGT+TGG | - | chr5.2:32775602-32775621 | MS.gene55320:intron | 30.0% |
| !! | CTATTATTGGTCTTGATTTG+TGG | - | chr5.2:32776137-32776156 | MS.gene55320:CDS | 30.0% |
| !! | GCATTTTGGTCATTTACTTT+GGG | - | chr5.2:32774966-32774985 | MS.gene55320:intron | 30.0% |
| !! | GCATTTTGGTCATTTACTTT+GGG | + | chr5.2:32774985-32774966 | None:intergenic | 30.0% |
| !! | TCTTTAGAATTGAGAGTTCA+GGG | + | chr5.2:32777203-32777222 | None:intergenic | 30.0% |
| !! | TTAAGCTTTGTTATGATCCT+TGG | - | chr5.2:32776392-32776411 | MS.gene55320:intron | 30.0% |
| !!! | ACCTAATTTTTTTGGGAAGA+GGG | + | chr5.2:32777798-32777817 | None:intergenic | 30.0% |
| !!! | ATTGTTTGGATGTTGGTTTT+AGG | - | chr5.2:32776741-32776760 | MS.gene55320:intron | 30.0% |
| !!! | GCTTGACCTATATTTTTTCT+TGG | + | chr5.2:32776089-32776108 | None:intergenic | 30.0% |
| !!! | GTTTTTAGGATGTAGTTAAC+TGG | + | chr5.2:32777468-32777487 | None:intergenic | 30.0% |
| !!! | TTCTAGAGTGATTTTGAACT+CGG | - | chr5.2:32774645-32774664 | MS.gene55320:intron | 30.0% |
| AAGATAATTCCTTCTCTGCA+TGG | - | chr5.2:32776308-32776327 | MS.gene55320:CDS | 35.0% | |
| ACAACAGGAAAAAGGGAAAA+AGG | + | chr5.2:32777838-32777857 | None:intergenic | 35.0% | |
| ACAACCTTCTCATTTCATCT+TGG | - | chr5.2:32774212-32774231 | MS.gene55320:intron | 35.0% | |
| ACAAGATGGAGTATGATACA+TGG | + | chr5.2:32775559-32775578 | None:intergenic | 35.0% | |
| ACTAATAAATGCAACTGGCT+AGG | + | chr5.2:32778141-32778160 | None:intergenic | 35.0% | |
| AGAGAAGGAATTATCTTGTG+TGG | + | chr5.2:32776305-32776324 | None:intergenic | 35.0% | |
| AGTTCAATTCCTTATGCAGA+AGG | - | chr5.2:32777068-32777087 | MS.gene55320:intron | 35.0% | |
| ATCCTTGTCTTACAACCATT+CGG | - | chr5.2:32778814-32778833 | MS.gene55320:CDS | 35.0% | |
| ATGGATTTCTAAGCTTCACA+AGG | - | chr5.2:32777254-32777273 | MS.gene55320:intron | 35.0% | |
| CAAACAACAACTCAACAAGA+TGG | + | chr5.2:32775573-32775592 | None:intergenic | 35.0% | |
| CAACCTTCTCATTTCATCTT+GGG | - | chr5.2:32774213-32774232 | MS.gene55320:intron | 35.0% | |
| CTTAATAGCAACATGTTCCA+AGG | + | chr5.2:32777131-32777150 | None:intergenic | 35.0% | |
| CTTAATTGTGTACCATTGCA+AGG | + | chr5.2:32777041-32777060 | None:intergenic | 35.0% | |
| GAATGAGCAAATCCATTTCT+TGG | + | chr5.2:32774818-32774837 | None:intergenic | 35.0% | |
| GACTTATAAACCATATGCTC+TGG | - | chr5.2:32778091-32778110 | MS.gene55320:intron | 35.0% | |
| GTAGACCATATGAACTATGA+AGG | - | chr5.2:32776034-32776053 | MS.gene55320:intron | 35.0% | |
| TAAAACACTCTTGCATATGG+AGG | - | chr5.2:32777341-32777360 | MS.gene55320:intron | 35.0% | |
| TAAATATCCCACGTAGTATC+GGG | + | chr5.2:32777576-32777595 | None:intergenic | 35.0% | |
| TAATTCAAAATCCAACCCTG+CGG | - | chr5.2:32775207-32775226 | MS.gene55320:intron | 35.0% | |
| TCCCTCTTCCCAAAAAAATT+AGG | - | chr5.2:32777794-32777813 | MS.gene55320:intron | 35.0% | |
| TGTAAGAGAAAATCAGCCTA+GGG | + | chr5.2:32778217-32778236 | None:intergenic | 35.0% | |
| TGTCATCCAAAATCAAAGGA+TGG | - | chr5.2:32778440-32778459 | MS.gene55320:intron | 35.0% | |
| TTGACTACTTCTCAAGCTTT+GGG | - | chr5.2:32776474-32776493 | MS.gene55320:intron | 35.0% | |
| TTGTAAGAGAAAATCAGCCT+AGG | + | chr5.2:32778218-32778237 | None:intergenic | 35.0% | |
| TTTCTCAATTTCAGTTTCCC+AGG | - | chr5.2:32778774-32778793 | MS.gene55320:CDS | 35.0% | |
| TTTGACTACTTCTCAAGCTT+TGG | - | chr5.2:32776473-32776492 | MS.gene55320:intron | 35.0% | |
| ! | AAGTGAGCAAGTTCTTTTGT+GGG | + | chr5.2:32777863-32777882 | None:intergenic | 35.0% |
| ! | AATCCATGTTGGTCTATATG+TGG | - | chr5.2:32775613-32775632 | MS.gene55320:intron | 35.0% |
| ! | AATGGGCAATTTTCGTTGAA+AGG | - | chr5.2:32774542-32774561 | MS.gene55320:CDS | 35.0% |
| ! | AGTAGAGTCTTGTCTTAAAG+GGG | - | chr5.2:32775965-32775984 | MS.gene55320:intron | 35.0% |
| ! | ATGGATTAAAGACACGAGAA+AGG | - | chr5.2:32778047-32778066 | MS.gene55320:intron | 35.0% |
| ! | ATGGGCAATTTTCGTTGAAA+GGG | - | chr5.2:32774543-32774562 | MS.gene55320:CDS | 35.0% |
| ! | CTCACATTTCTTTTGCTTCT+TGG | + | chr5.2:32778874-32778893 | None:intergenic | 35.0% |
| ! | CTTTGAAAAAGTTCTCAAGG+TGG | + | chr5.2:32777524-32777543 | None:intergenic | 35.0% |
| ! | GGCAAATGAAAGGTATATCA+AGG | - | chr5.2:32776762-32776781 | MS.gene55320:intron | 35.0% |
| ! | GGGTTAAGGGTTAAGTTTTT+GGG | + | chr5.2:32774778-32774797 | None:intergenic | 35.0% |
| ! | TATAGGTATGACTTGCATTC+TGG | - | chr5.2:32775741-32775760 | MS.gene55320:intron | 35.0% |
| ! | TCTAAGTCTGATTTTCTTGC+AGG | - | chr5.2:32777657-32777676 | MS.gene55320:intron | 35.0% |
| ! | TGTTCCATTTGTTGGATGAA+TGG | - | chr5.2:32775867-32775886 | MS.gene55320:intron | 35.0% |
| ! | TTTAAGGTTACTGTAGGCAT+TGG | - | chr5.2:32776957-32776976 | MS.gene55320:intron | 35.0% |
| !! | ATTCGGTGCAAATTGAATTC+TGG | + | chr5.2:32774188-32774207 | None:intergenic | 35.0% |
| !! | CTCTTTAGAATTGAGAGTTC+AGG | + | chr5.2:32777204-32777223 | None:intergenic | 35.0% |
| !! | GGCATTTTGGTCATTTACTT+TGG | - | chr5.2:32774965-32774984 | MS.gene55320:intron | 35.0% |
| !! | GGCATTTTGGTCATTTACTT+TGG | + | chr5.2:32774984-32774965 | None:intergenic | 35.0% |
| !! | TATTGGTCTTGATTTGTGGT+TGG | - | chr5.2:32776141-32776160 | MS.gene55320:CDS | 35.0% |
| !! | TCTGGAATTGTTGACTCAAT+GGG | - | chr5.2:32775759-32775778 | MS.gene55320:intron | 35.0% |
| !! | TCTTGATTGTTGTTTCTCTG+AGG | - | chr5.2:32774401-32774420 | MS.gene55320:intron | 35.0% |
| !! | TTCTGGAATTGTTGACTCAA+TGG | - | chr5.2:32775758-32775777 | MS.gene55320:intron | 35.0% |
| !!! | CACCTAATTTTTTTGGGAAG+AGG | + | chr5.2:32777799-32777818 | None:intergenic | 35.0% |
| !!! | CATTTTGCACGTGTTGTTTA+CGG | + | chr5.2:32775469-32775488 | None:intergenic | 35.0% |
| !!! | GTTGGTTTTAGGCAAATGAA+AGG | - | chr5.2:32776752-32776771 | MS.gene55320:intron | 35.0% |
| !!! | TGTGTTTCTTTTTTAGCCCT+AGG | - | chr5.2:32778198-32778217 | MS.gene55320:intron | 35.0% |
| AAAACTTAACCCTTAACCCC+AGG | - | chr5.2:32774779-32774798 | MS.gene55320:intron | 40.0% | |
| AAAGGATGGTCAGCATCATT+TGG | - | chr5.2:32778454-32778473 | MS.gene55320:intron | 40.0% | |
| ACGAAGGTTATGCTACCATA+TGG | - | chr5.2:32778620-32778639 | MS.gene55320:intron | 40.0% | |
| ACTCTGACAGATATACGTTC+CGG | - | chr5.2:32778417-32778436 | MS.gene55320:intron | 40.0% | |
| AGAAGCAACAGAGAAAGCAA+CGG | + | chr5.2:32774433-32774452 | None:intergenic | 40.0% | |
| AGCCTTCAAAATCAGGCATT+TGG | - | chr5.2:32775637-32775656 | MS.gene55320:intron | 40.0% | |
| AGGAAAAAGGGAAAAAGGAG+AGG | + | chr5.2:32777833-32777852 | None:intergenic | 40.0% | |
| ATGTGGTAGCCTTCAAAATC+AGG | - | chr5.2:32775630-32775649 | MS.gene55320:intron | 40.0% | |
| CCATCTTGTAGCCCAATATT+AGG | + | chr5.2:32777238-32777257 | None:intergenic | 40.0% | |
| CCTAATATTGGGCTACAAGA+TGG | - | chr5.2:32777235-32777254 | MS.gene55320:intron | 40.0% | |
| CGAAGGTTATGCTACCATAT+GGG | - | chr5.2:32778621-32778640 | MS.gene55320:intron | 40.0% | |
| CTACCACATATAGACCAACA+TGG | + | chr5.2:32775619-32775638 | None:intergenic | 40.0% | |
| CTGGAAATTGCGTCATTGAT+TGG | + | chr5.2:32774169-32774188 | None:intergenic | 40.0% | |
| CTTGTGTGGATAAGAGTAGT+AGG | + | chr5.2:32776291-32776310 | None:intergenic | 40.0% | |
| GATCTTGTCAATCATGATGG+AGG | - | chr5.2:32775151-32775170 | MS.gene55320:intron | 40.0% | |
| GATGACATGGCAACATGTAT+TGG | - | chr5.2:32775789-32775808 | MS.gene55320:intron | 40.0% | |
| GCAACACTATTTGAGTACCT+GGG | + | chr5.2:32778794-32778813 | None:intergenic | 40.0% | |
| GCAGGTCTGTTAATTACTTC+TGG | - | chr5.2:32776834-32776853 | MS.gene55320:intron | 40.0% | |
| GTGTCCATTCATCCAACAAA+TGG | + | chr5.2:32775874-32775893 | None:intergenic | 40.0% | |
| TAACCCCAAAAACTAGCTGA+AGG | + | chr5.2:32777173-32777192 | None:intergenic | 40.0% | |
| TCCTTGTCTTACAACCATTC+GGG | - | chr5.2:32778815-32778834 | MS.gene55320:CDS | 40.0% | |
| TGCAACACTATTTGAGTACC+TGG | + | chr5.2:32778795-32778814 | None:intergenic | 40.0% | |
| TGGTACATACCTTCTGCATA+AGG | + | chr5.2:32777080-32777099 | None:intergenic | 40.0% | |
| TGTCCCAAGATGAAATGAGA+AGG | + | chr5.2:32774219-32774238 | None:intergenic | 40.0% | |
| TTTCTTGCAGGATTTGCAGT+TGG | - | chr5.2:32777669-32777688 | MS.gene55320:intron | 40.0% | |
| ! | AAACCAGTTTTACACTGACG+CGG | - | chr5.2:32775309-32775328 | MS.gene55320:intron | 40.0% |
| ! | AGCCAAATGCCTGATTTTGA+AGG | + | chr5.2:32775642-32775661 | None:intergenic | 40.0% |
| ! | CAAGTGAGCAAGTTCTTTTG+TGG | + | chr5.2:32777864-32777883 | None:intergenic | 40.0% |
| ! | GGGGTTAAGGGTTAAGTTTT+TGG | + | chr5.2:32774779-32774798 | None:intergenic | 40.0% |
| ! | TGGGCAATTTTCGTTGAAAG+GGG | - | chr5.2:32774544-32774563 | MS.gene55320:CDS | 40.0% |
| ! | TTGTCAATCATGATGGAGGA+CGG | - | chr5.2:32775155-32775174 | MS.gene55320:intron | 40.0% |
| ! | TTTGTCACTGGTGATAACGA+AGG | - | chr5.2:32778604-32778623 | MS.gene55320:intron | 40.0% |
| !! | CAAGGATCTTGTTGACTCAA+GGG | - | chr5.2:32777892-32777911 | MS.gene55320:intron | 40.0% |
| !! | CCTTTGATTTTGGATGACAC+CGG | + | chr5.2:32778439-32778458 | None:intergenic | 40.0% |
| !! | CTTCTGATGGATTCATTCGA+AGG | - | chr5.2:32774448-32774467 | MS.gene55320:intron | 40.0% |
| !! | GTCTTGATTTGTGGTTGGAT+AGG | - | chr5.2:32776146-32776165 | MS.gene55320:CDS | 40.0% |
| !! | TCAAGGATCTTGTTGACTCA+AGG | - | chr5.2:32777891-32777910 | MS.gene55320:intron | 40.0% |
| !! | TGCTGACCATCCTTTGATTT+TGG | + | chr5.2:32778449-32778468 | None:intergenic | 40.0% |
| AAAAACTAGCTGAAGGAGGG+AGG | + | chr5.2:32777166-32777185 | None:intergenic | 45.0% | |
| AAAACTAGCTGAAGGAGGGA+GGG | + | chr5.2:32777165-32777184 | None:intergenic | 45.0% | |
| AAATGCTGTTAGGGCTTGTG+AGG | + | chr5.2:32775065-32775084 | None:intergenic | 45.0% | |
| AAGTCTGAGTTCAGGGATTC+AGG | - | chr5.2:32777629-32777648 | MS.gene55320:intron | 45.0% | |
| AATGGGTAGTCACGATGACA+TGG | - | chr5.2:32775776-32775795 | MS.gene55320:intron | 45.0% | |
| ACACCAAGAAGTCTGAGTTC+AGG | - | chr5.2:32777621-32777640 | MS.gene55320:intron | 45.0% | |
| AGGAAAGATAGGAAGAGCAG+AGG | + | chr5.2:32776271-32776290 | None:intergenic | 45.0% | |
| AGGATTTGCAGTTGGATCAG+TGG | - | chr5.2:32777677-32777696 | MS.gene55320:intron | 45.0% | |
| ATAATGTGTACAACCTCCGC+AGG | + | chr5.2:32775226-32775245 | None:intergenic | 45.0% | |
| ATCCCTGAACTCAGACTTCT+TGG | + | chr5.2:32777627-32777646 | None:intergenic | 45.0% | |
| ATGTCTGGTGCATTTGTCAC+TGG | - | chr5.2:32778592-32778611 | MS.gene55320:intron | 45.0% | |
| CACCAAGAAGTCTGAGTTCA+GGG | - | chr5.2:32777622-32777641 | MS.gene55320:intron | 45.0% | |
| CCATATGGGATGCTAGAAGT+AGG | - | chr5.2:32778635-32778654 | MS.gene55320:intron | 45.0% | |
| CCATGCTTTGTGTGTGCAAT+AGG | + | chr5.2:32778006-32778025 | None:intergenic | 45.0% | |
| CCCAAAAACTAGCTGAAGGA+GGG | + | chr5.2:32777169-32777188 | None:intergenic | 45.0% | |
| CCTACTTCTAGCATCCCATA+TGG | + | chr5.2:32778638-32778657 | None:intergenic | 45.0% | |
| CCTATTGCACACACAAAGCA+TGG | - | chr5.2:32778003-32778022 | MS.gene55320:intron | 45.0% | |
| CGACAAACCAAACCTGTCAA+TGG | - | chr5.2:32777013-32777032 | MS.gene55320:intron | 45.0% | |
| GTGGGCAACAACAGGAAAAA+GGG | + | chr5.2:32777845-32777864 | None:intergenic | 45.0% | |
| TAATGTGTACAACCTCCGCA+GGG | + | chr5.2:32775225-32775244 | None:intergenic | 45.0% | |
| TAGAAGAATAGGGGTAGCAG+CGG | + | chr5.2:32777292-32777311 | None:intergenic | 45.0% | |
| TCCCGAATGGTTGTAAGACA+AGG | + | chr5.2:32778819-32778838 | None:intergenic | 45.0% | |
| TGGAAGAAACCATGCAGAGA+AGG | + | chr5.2:32776320-32776339 | None:intergenic | 45.0% | |
| TGTGGGCAACAACAGGAAAA+AGG | + | chr5.2:32777846-32777865 | None:intergenic | 45.0% | |
| TTTGCAGTTGGATCAGTGGA+TGG | - | chr5.2:32777681-32777700 | MS.gene55320:intron | 45.0% | |
| ! | AACCAGTTTTACACTGACGC+GGG | - | chr5.2:32775310-32775329 | MS.gene55320:intron | 45.0% |
| ! | ATACGATTTGGACGCTTCTG+TGG | - | chr5.2:32774347-32774366 | MS.gene55320:CDS | 45.0% |
| ! | ATTGACTCCATGTCTGTCTC+GGG | - | chr5.2:32776933-32776952 | MS.gene55320:intron | 45.0% |
| ! | GATTGACTCCATGTCTGTCT+CGG | - | chr5.2:32776932-32776951 | MS.gene55320:intron | 45.0% |
| ! | GCTTTCTCTGTTGCTTCTGA+TGG | - | chr5.2:32774435-32774454 | MS.gene55320:intron | 45.0% |
| ! | GTTCTTTTGTGGGCAACAAC+AGG | + | chr5.2:32777853-32777872 | None:intergenic | 45.0% |
| ! | TCGGGGTTTAAGGTTACTGT+AGG | - | chr5.2:32776951-32776970 | MS.gene55320:intron | 45.0% |
| !! | CCGGTGTCATCCAAAATCAA+AGG | - | chr5.2:32778436-32778455 | MS.gene55320:intron | 45.0% |
| !!! | CCCTCCTTCAGCTAGTTTTT+GGG | - | chr5.2:32777166-32777185 | MS.gene55320:intron | 45.0% |
| !!! | CCTCCTTCAGCTAGTTTTTG+GGG | - | chr5.2:32777167-32777186 | MS.gene55320:intron | 45.0% |
| !!! | TCCCTCCTTCAGCTAGTTTT+TGG | - | chr5.2:32777165-32777184 | MS.gene55320:intron | 45.0% |
| !!! | TTTTTTGGGAAGAGGGAGAG+AGG | + | chr5.2:32777791-32777810 | None:intergenic | 45.0% |
| !! | ATATAAAAATAAAAATTGTT+TGG | - | chr5.2:32776727-32776746 | MS.gene55320:intron | 5.0% |
| !! | TTATTATAAATTATAAAACT+TGG | - | chr5.2:32778541-32778560 | MS.gene55320:intron | 5.0% |
| AAACTAGCTGAAGGAGGGAG+GGG | + | chr5.2:32777164-32777183 | None:intergenic | 50.0% | |
| AGCGTGAGTTAACTCACGCA+GGG | + | chr5.2:32774863-32774882 | None:intergenic | 50.0% | |
| AGGAGTCAACTCCTGCTAGT+GGG | - | chr5.2:32776166-32776185 | MS.gene55320:CDS | 50.0% | |
| AGTTGGATCAGTGGATGGAC+GGG | - | chr5.2:32777686-32777705 | MS.gene55320:intron | 50.0% | |
| CAAGGCTCCATTGACAGGTT+TGG | + | chr5.2:32777023-32777042 | None:intergenic | 50.0% | |
| CAGTTGGATCAGTGGATGGA+CGG | - | chr5.2:32777685-32777704 | MS.gene55320:intron | 50.0% | |
| CATGTCTGTCTCGGGGTTTA+AGG | - | chr5.2:32776941-32776960 | MS.gene55320:intron | 50.0% | |
| CATTGCAAGGCTCCATTGAC+AGG | + | chr5.2:32777028-32777047 | None:intergenic | 50.0% | |
| CCCCAAAAACTAGCTGAAGG+AGG | + | chr5.2:32777170-32777189 | None:intergenic | 50.0% | |
| CCTGCTAGTGGGAAATGCTT+TGG | - | chr5.2:32776177-32776196 | MS.gene55320:CDS | 50.0% | |
| CGTGAGTTAACTCATGCTGC+GGG | - | chr5.2:32774926-32774945 | MS.gene55320:intron | 50.0% | |
| CTGTCAATGGAGCCTTGCAA+TGG | - | chr5.2:32777026-32777045 | MS.gene55320:intron | 50.0% | |
| CTTAAACCCCGAGACAGACA+TGG | + | chr5.2:32776943-32776962 | None:intergenic | 50.0% | |
| GCATGTTGTGGGCCAAGAAA+TGG | - | chr5.2:32774803-32774822 | MS.gene55320:intron | 50.0% | |
| GCGTGAGTTAACTCATGCTG+CGG | - | chr5.2:32774925-32774944 | MS.gene55320:intron | 50.0% | |
| TAGCGTGAGTTAACTCACGC+AGG | + | chr5.2:32774864-32774883 | None:intergenic | 50.0% | |
| TAGGAGTCAACTCCTGCTAG+TGG | - | chr5.2:32776165-32776184 | MS.gene55320:CDS | 50.0% | |
| TCGGATCAAGTTCTGCTCGA+AGG | - | chr5.2:32779027-32779046 | MS.gene55320:CDS | 50.0% | |
| TGAGGAGGCTCTACTCTGTA+AGG | + | chr5.2:32778975-32778994 | None:intergenic | 50.0% | |
| TGGGTTTCCCGATACTACGT+GGG | - | chr5.2:32777566-32777585 | MS.gene55320:intron | 50.0% | |
| TTCAAAATCCAACCCTGCGG+AGG | - | chr5.2:32775210-32775229 | MS.gene55320:intron | 50.0% | |
| TTGACTCCATGTCTGTCTCG+GGG | - | chr5.2:32776934-32776953 | MS.gene55320:intron | 50.0% | |
| TTGGGTTTCCCGATACTACG+TGG | - | chr5.2:32777565-32777584 | MS.gene55320:intron | 50.0% | |
| ! | CCAAAGCATTTCCCACTAGC+AGG | + | chr5.2:32776180-32776199 | None:intergenic | 50.0% |
| ! | TCAATCATGATGGAGGACGG+AGG | - | chr5.2:32775158-32775177 | MS.gene55320:intron | 50.0% |
| ! | TGCTCACTTGCTGAACGTCA+AGG | - | chr5.2:32777874-32777893 | MS.gene55320:intron | 50.0% |
| !!! | TAACTCACGCAGGGGCATTT+TGG | - | chr5.2:32774952-32774971 | MS.gene55320:intron | 50.0% |
| !!! | TAACTCACGCAGGGGCATTT+TGG | + | chr5.2:32774971-32774952 | None:intergenic | 50.0% |
| AACTAGCTGAAGGAGGGAGG+GGG | + | chr5.2:32777163-32777182 | None:intergenic | 55.0% | |
| ACAACATGCGCCTGGGGTTA+AGG | + | chr5.2:32774792-32774811 | None:intergenic | 55.0% | |
| AGAACACCCCCAAAGCCCTA+TGG | - | chr5.2:32775029-32775048 | MS.gene55320:intron | 55.0% | |
| AGCCCTAACCCATAGGGCTT+TGG | + | chr5.2:32775041-32775060 | None:intergenic | 55.0% | |
| CAACATGCGCCTGGGGTTAA+GGG | + | chr5.2:32774791-32774810 | None:intergenic | 55.0% | |
| CAGCTAGAAGCTGTCCCGAA+TGG | + | chr5.2:32778832-32778851 | None:intergenic | 55.0% | |
| CCCTAACCCATAGGGCTTTG+GGG | + | chr5.2:32775039-32775058 | None:intergenic | 55.0% | |
| GAACACCCCCAAAGCCCTAT+GGG | - | chr5.2:32775030-32775049 | MS.gene55320:intron | 55.0% | |
| GCCCTAACCCATAGGGCTTT+GGG | + | chr5.2:32775040-32775059 | None:intergenic | 55.0% | |
| GCGTGAGTTAACTCACGCAG+GGG | + | chr5.2:32774862-32774881 | None:intergenic | 55.0% | |
| GTCCCGCGTCAGTGTAAAAC+TGG | + | chr5.2:32775315-32775334 | None:intergenic | 55.0% | |
| TAACCCCAGGCGCATGTTGT+GGG | - | chr5.2:32774792-32774811 | MS.gene55320:intron | 55.0% | |
| TGAGGCAGCCCTAACCCATA+GGG | + | chr5.2:32775047-32775066 | None:intergenic | 55.0% | |
| TGCGGGAGTTAACTCACGCA+GGG | - | chr5.2:32774943-32774962 | MS.gene55320:intron | 55.0% | |
| TTAACCCCAGGCGCATGTTG+TGG | - | chr5.2:32774791-32774810 | MS.gene55320:intron | 55.0% | |
| ! | CCCCAAAGCCCTATGGGTTA+GGG | - | chr5.2:32775036-32775055 | MS.gene55320:intron | 55.0% |
| ! | CCTAACCCATAGGGCTTTGG+GGG | + | chr5.2:32775038-32775057 | None:intergenic | 55.0% |
| CACTGACGCGGGACATCAGT+AGG | - | chr5.2:32775321-32775340 | MS.gene55320:intron | 60.0% | |
| CCCCCAAAGCCCTATGGGTT+AGG | - | chr5.2:32775035-32775054 | MS.gene55320:intron | 60.0% | |
| CTGCGGGAGTTAACTCACGC+AGG | - | chr5.2:32774942-32774961 | MS.gene55320:intron | 60.0% | |
| GCGGGAGTTAACTCACGCAG+GGG | - | chr5.2:32774944-32774963 | MS.gene55320:intron | 60.0% | |
| GTGAGGCAGCCCTAACCCAT+AGG | + | chr5.2:32775048-32775067 | None:intergenic | 60.0% | |
| GTGTACAACCTCCGCAGGGT+TGG | + | chr5.2:32775221-32775240 | None:intergenic | 60.0% | |
| TTGGCCCACAACATGCGCCT+GGG | + | chr5.2:32774799-32774818 | None:intergenic | 60.0% | |
| CTTGGCCCACAACATGCGCC+TGG | + | chr5.2:32774800-32774819 | None:intergenic | 65.0% | |
| TGGCCCACAACATGCGCCTG+GGG | + | chr5.2:32774798-32774817 | None:intergenic | 65.0% | |
| !! | GGATGGACGGGTTGCGTTGC+AGG | - | chr5.2:32777698-32777717 | MS.gene55320:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 32774121 | 32779058 | 32774121 | ID=MS.gene55320 |
| chr5.2 | mRNA | 32774121 | 32779058 | 32774121 | ID=MS.gene55320.t1;Parent=MS.gene55320 |
| chr5.2 | exon | 32778939 | 32779058 | 32778939 | ID=MS.gene55320.t1.exon1;Parent=MS.gene55320.t1 |
| chr5.2 | CDS | 32778939 | 32779058 | 32778939 | ID=cds.MS.gene55320.t1;Parent=MS.gene55320.t1 |
| chr5.2 | exon | 32778710 | 32778843 | 32778710 | ID=MS.gene55320.t1.exon2;Parent=MS.gene55320.t1 |
| chr5.2 | CDS | 32778710 | 32778843 | 32778710 | ID=cds.MS.gene55320.t1;Parent=MS.gene55320.t1 |
| chr5.2 | exon | 32777351 | 32777433 | 32777351 | ID=MS.gene55320.t1.exon3;Parent=MS.gene55320.t1 |
| chr5.2 | CDS | 32777351 | 32777433 | 32777351 | ID=cds.MS.gene55320.t1;Parent=MS.gene55320.t1 |
| chr5.2 | exon | 32776090 | 32776341 | 32776090 | ID=MS.gene55320.t1.exon4;Parent=MS.gene55320.t1 |
| chr5.2 | CDS | 32776090 | 32776341 | 32776090 | ID=cds.MS.gene55320.t1;Parent=MS.gene55320.t1 |
| chr5.2 | exon | 32775428 | 32775500 | 32775428 | ID=MS.gene55320.t1.exon5;Parent=MS.gene55320.t1 |
| chr5.2 | CDS | 32775428 | 32775500 | 32775428 | ID=cds.MS.gene55320.t1;Parent=MS.gene55320.t1 |
| chr5.2 | exon | 32774672 | 32774752 | 32774672 | ID=MS.gene55320.t1.exon6;Parent=MS.gene55320.t1 |
| chr5.2 | CDS | 32774672 | 32774752 | 32774672 | ID=cds.MS.gene55320.t1;Parent=MS.gene55320.t1 |
| chr5.2 | exon | 32774507 | 32774588 | 32774507 | ID=MS.gene55320.t1.exon7;Parent=MS.gene55320.t1 |
| chr5.2 | CDS | 32774507 | 32774588 | 32774507 | ID=cds.MS.gene55320.t1;Parent=MS.gene55320.t1 |
| chr5.2 | exon | 32774291 | 32774391 | 32774291 | ID=MS.gene55320.t1.exon8;Parent=MS.gene55320.t1 |
| chr5.2 | CDS | 32774291 | 32774391 | 32774291 | ID=cds.MS.gene55320.t1;Parent=MS.gene55320.t1 |
| chr5.2 | exon | 32774121 | 32774199 | 32774121 | ID=MS.gene55320.t1.exon9;Parent=MS.gene55320.t1 |
| chr5.2 | CDS | 32774121 | 32774199 | 32774121 | ID=cds.MS.gene55320.t1;Parent=MS.gene55320.t1 |
| Gene Sequence |
| Protein sequence |
