Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56570.t1 | RHN62068.1 | 93.2 | 590 | 40 | 0 | 1 | 590 | 1 | 590 | 1.70E-269 | 938.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56570.t1 | Q8GYM6 | 62.6 | 465 | 140 | 8 | 1 | 457 | 1 | 439 | 2.1e-143 | 510.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56570.t1 | A0A396IBC3 | 93.2 | 590 | 40 | 0 | 1 | 590 | 1 | 590 | 1.2e-269 | 938.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050654 | MS.gene56570 | 0.811125 | 8.19E-51 | -1.69E-46 |
| MS.gene050759 | MS.gene56570 | 0.803554 | 3.30E-49 | -1.69E-46 |
| MS.gene050941 | MS.gene56570 | 0.822581 | 2.19E-53 | -1.69E-46 |
| MS.gene052518 | MS.gene56570 | 0.811755 | 5.97E-51 | -1.69E-46 |
| MS.gene054479 | MS.gene56570 | 0.850304 | 1.85E-60 | -1.69E-46 |
| MS.gene05517 | MS.gene56570 | 0.805065 | 1.60E-49 | -1.69E-46 |
| MS.gene055513 | MS.gene56570 | 0.814794 | 1.28E-51 | -1.69E-46 |
| MS.gene055926 | MS.gene56570 | 0.817108 | 3.91E-52 | -1.69E-46 |
| MS.gene056831 | MS.gene56570 | 0.807677 | 4.50E-50 | -1.69E-46 |
| MS.gene057055 | MS.gene56570 | 0.806131 | 9.54E-50 | -1.69E-46 |
| MS.gene059283 | MS.gene56570 | 0.830965 | 2.18E-55 | -1.69E-46 |
| MS.gene059725 | MS.gene56570 | 0.816289 | 5.97E-52 | -1.69E-46 |
| MS.gene059842 | MS.gene56570 | 0.810416 | 1.17E-50 | -1.69E-46 |
| MS.gene060802 | MS.gene56570 | 0.810898 | 9.17E-51 | -1.69E-46 |
| MS.gene060803 | MS.gene56570 | 0.816405 | 5.63E-52 | -1.69E-46 |
| MS.gene060932 | MS.gene56570 | 0.817063 | 4.01E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56570.t1 | MTR_4g083690 | 90.169 | 590 | 18 | 2 | 1 | 590 | 1 | 550 | 0.0 | 1030 |
| MS.gene56570.t1 | MTR_2g068690 | 55.276 | 635 | 198 | 17 | 1 | 590 | 1 | 594 | 0.0 | 595 |
| MS.gene56570.t1 | MTR_7g094070 | 59.586 | 532 | 124 | 6 | 31 | 553 | 1 | 450 | 0.0 | 592 |
| MS.gene56570.t1 | MTR_7g094060 | 49.673 | 459 | 124 | 10 | 149 | 590 | 2 | 370 | 2.29e-110 | 335 |
| MS.gene56570.t1 | MTR_1g104820 | 52.137 | 234 | 110 | 1 | 35 | 268 | 141 | 372 | 2.50e-74 | 242 |
| MS.gene56570.t1 | MTR_1g104820 | 52.137 | 234 | 110 | 1 | 35 | 268 | 202 | 433 | 7.06e-74 | 243 |
| MS.gene56570.t1 | MTR_1g104820 | 49.721 | 179 | 90 | 0 | 35 | 213 | 141 | 319 | 1.90e-57 | 196 |
| MS.gene56570.t1 | MTR_1g104820 | 50.000 | 174 | 87 | 0 | 35 | 208 | 141 | 314 | 1.41e-56 | 193 |
| MS.gene56570.t1 | MTR_5g055170 | 33.600 | 250 | 156 | 6 | 30 | 277 | 5 | 246 | 3.60e-41 | 154 |
| MS.gene56570.t1 | MTR_5g010140 | 32.800 | 250 | 158 | 6 | 30 | 277 | 5 | 246 | 5.49e-40 | 151 |
| MS.gene56570.t1 | MTR_5g055170 | 30.964 | 197 | 129 | 4 | 82 | 277 | 1 | 191 | 7.74e-28 | 115 |
| MS.gene56570.t1 | MTR_7g055650 | 26.522 | 230 | 152 | 4 | 44 | 273 | 24 | 236 | 5.40e-20 | 90.1 |
| MS.gene56570.t1 | MTR_5g010140 | 33.913 | 115 | 70 | 3 | 163 | 277 | 31 | 139 | 1.24e-16 | 81.6 |
| MS.gene56570.t1 | MTR_7g055650 | 26.316 | 209 | 137 | 4 | 44 | 252 | 24 | 215 | 2.27e-15 | 77.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56570.t1 | AT5G45190 | 55.519 | 607 | 186 | 14 | 1 | 582 | 1 | 548 | 0.0 | 596 |
| MS.gene56570.t1 | AT5G45190 | 54.045 | 618 | 189 | 15 | 1 | 582 | 1 | 559 | 0.0 | 580 |
| MS.gene56570.t1 | AT4G19600 | 55.705 | 596 | 171 | 13 | 1 | 586 | 1 | 513 | 0.0 | 576 |
| MS.gene56570.t1 | AT5G45190 | 51.205 | 498 | 158 | 14 | 111 | 582 | 1 | 439 | 1.07e-140 | 417 |
| MS.gene56570.t1 | AT4G19560 | 48.780 | 451 | 175 | 10 | 15 | 462 | 14 | 411 | 3.15e-116 | 353 |
| MS.gene56570.t1 | AT1G35440 | 50.607 | 247 | 113 | 2 | 34 | 278 | 7 | 246 | 9.47e-86 | 267 |
| MS.gene56570.t1 | AT1G27630 | 53.782 | 238 | 107 | 2 | 32 | 269 | 32 | 266 | 2.11e-85 | 269 |
| MS.gene56570.t1 | AT1G27630 | 53.712 | 229 | 103 | 2 | 32 | 260 | 32 | 257 | 9.95e-83 | 261 |
| MS.gene56570.t1 | AT4G19560 | 43.767 | 361 | 149 | 9 | 105 | 462 | 30 | 339 | 1.44e-67 | 224 |
| MS.gene56570.t1 | AT1G27630 | 49.457 | 184 | 90 | 2 | 86 | 269 | 1 | 181 | 4.68e-55 | 186 |
| MS.gene56570.t1 | AT1G27630 | 49.457 | 184 | 90 | 2 | 86 | 269 | 1 | 181 | 4.68e-55 | 186 |
| MS.gene56570.t1 | AT1G27630 | 49.457 | 184 | 90 | 2 | 86 | 269 | 1 | 181 | 4.68e-55 | 186 |
| MS.gene56570.t1 | AT1G27630 | 49.457 | 184 | 90 | 2 | 86 | 269 | 1 | 181 | 4.68e-55 | 186 |
| MS.gene56570.t1 | AT2G26430 | 33.200 | 250 | 157 | 6 | 30 | 277 | 5 | 246 | 9.71e-40 | 150 |
| MS.gene56570.t1 | AT2G26430 | 33.200 | 250 | 157 | 6 | 30 | 277 | 5 | 246 | 6.26e-37 | 139 |
| MS.gene56570.t1 | AT2G26430 | 31.313 | 198 | 127 | 5 | 82 | 277 | 1 | 191 | 1.94e-27 | 114 |
| MS.gene56570.t1 | AT2G26430 | 31.313 | 198 | 127 | 5 | 82 | 277 | 1 | 191 | 1.94e-27 | 114 |
| MS.gene56570.t1 | AT5G48630 | 26.009 | 223 | 148 | 4 | 51 | 273 | 31 | 236 | 1.39e-16 | 80.5 |
| MS.gene56570.t1 | AT5G48630 | 26.009 | 223 | 148 | 4 | 51 | 273 | 34 | 239 | 2.76e-16 | 79.3 |
| MS.gene56570.t1 | AT5G48640 | 25.854 | 205 | 135 | 3 | 68 | 272 | 48 | 235 | 1.27e-14 | 74.7 |
| MS.gene56570.t1 | AT5G48640 | 26.733 | 202 | 131 | 4 | 71 | 272 | 3 | 187 | 2.37e-14 | 72.8 |
| MS.gene56570.t1 | AT5G48640 | 23.626 | 182 | 122 | 2 | 91 | 272 | 3 | 167 | 1.17e-11 | 64.3 |
| MS.gene56570.t1 | AT5G48640 | 23.626 | 182 | 122 | 2 | 91 | 272 | 3 | 167 | 1.17e-11 | 64.3 |
| MS.gene56570.t1 | AT5G48640 | 23.626 | 182 | 122 | 2 | 91 | 272 | 3 | 167 | 1.17e-11 | 64.3 |
Find 133 sgRNAs with CRISPR-Local
Find 341 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCAATCTTGATTGCTTCTT+TGG | 0.078252 | 4.4:+29265441 | None:intergenic |
| CTGACGGAAGCTTCACTTTC+AGG | 0.142810 | 4.4:+29266268 | None:intergenic |
| AGCAACATTGAACTTCTTTA+TGG | 0.142833 | 4.4:+29266502 | None:intergenic |
| TCAAGACGTTTCTTCGTTTC+TGG | 0.177305 | 4.4:+29264959 | None:intergenic |
| TTCGTTTCTGGTTGACTTGC+TGG | 0.211936 | 4.4:+29264971 | None:intergenic |
| CCTAATTCTGTAGCCTCCTT+TGG | 0.222544 | 4.4:+29265550 | None:intergenic |
| CCAAAGGAGGCTACAGAATT+AGG | 0.239989 | 4.4:-29265550 | MS.gene56570:CDS |
| GATGGATTCAATGCAGAAAA+AGG | 0.254848 | 4.4:-29265055 | MS.gene56570:CDS |
| GTCTTTGTCAATCATCTTGT+TGG | 0.262210 | 4.4:+29265294 | None:intergenic |
| CTAATTCTGTAGCCTCCTTT+GGG | 0.284087 | 4.4:+29265551 | None:intergenic |
| TGTACATTCTTACAAGATTT+AGG | 0.291338 | 4.4:-29269626 | MS.gene56570:CDS |
| GCCTCGACAAGGGGCTTATA+TGG | 0.299564 | 4.4:+29266524 | None:intergenic |
| CTGCACTCCCATCATTGCTT+TGG | 0.304701 | 4.4:+29265689 | None:intergenic |
| TCAATCTTGATTGCTTCTTT+GGG | 0.317346 | 4.4:+29265442 | None:intergenic |
| GAATCGATGACAAAATATTA+TGG | 0.323728 | 4.4:+29269167 | None:intergenic |
| GAAGCAGAAGGGGCTGCTGC+AGG | 0.353238 | 4.4:-29265841 | MS.gene56570:CDS |
| CCCGACAAAGATAAACTTGT+TGG | 0.366292 | 4.4:-29265595 | MS.gene56570:CDS |
| GAACTTGGCAGCAAGGAAAA+TGG | 0.372793 | 4.4:+29266290 | None:intergenic |
| CAATGATGGGAGTGCAGAAA+TGG | 0.380246 | 4.4:-29265683 | MS.gene56570:CDS |
| CTTCAATGTTGGTCAAAATC+TGG | 0.381107 | 4.4:-29265494 | MS.gene56570:CDS |
| TCCAACAAGTTTATCTTTGT+CGG | 0.386957 | 4.4:+29265594 | None:intergenic |
| TTTATCCTCTGTGCAGCAGC+AGG | 0.390517 | 4.4:+29267743 | None:intergenic |
| TATGATGTGGCTTAAATTGT+AGG | 0.409195 | 4.4:+29266325 | None:intergenic |
| GCTTCACTTCCTTGTGATTG+TGG | 0.410396 | 4.4:+29265859 | None:intergenic |
| TTCTGAGGTCTGAGAATCCC+TGG | 0.414945 | 4.4:+29265624 | None:intergenic |
| TGATGTCACCCCACGCCAAT+TGG | 0.422376 | 4.4:-29266217 | MS.gene56570:CDS |
| GCATGGAACTTTGTTAATGA+TGG | 0.427217 | 4.4:-29266458 | MS.gene56570:CDS |
| GAGGGTTGTACTTGCCACTT+TGG | 0.427992 | 4.4:-29266570 | MS.gene56570:CDS |
| CCAACAAGTTTATCTTTGTC+GGG | 0.428315 | 4.4:+29265595 | None:intergenic |
| AAGCAGAAGGGGCTGCTGCA+GGG | 0.429292 | 4.4:-29265840 | MS.gene56570:CDS |
| AGAGACTCCTCGTCCTCTTA+AGG | 0.429831 | 4.4:-29267807 | MS.gene56570:CDS |
| AAGCTTCACTTTCAGGAACT+TGG | 0.431818 | 4.4:+29266275 | None:intergenic |
| TCACCATGATCTTCATCATC+AGG | 0.433315 | 4.4:+29265103 | None:intergenic |
| CGTCAGACGGTGAGAAGGTC+TGG | 0.435777 | 4.4:-29266251 | MS.gene56570:CDS |
| GACAATAAAGAAAGATGTAA+TGG | 0.442098 | 4.4:-29265224 | MS.gene56570:CDS |
| CATATGGCAGCACTTGTGTC+TGG | 0.444420 | 4.4:-29269821 | MS.gene56570:CDS |
| ACCGAAAACCAAAGCAATGA+TGG | 0.455608 | 4.4:-29265697 | MS.gene56570:CDS |
| GACGATAAAGAAAGATGTAA+TGG | 0.462192 | 4.4:-29265365 | MS.gene56570:CDS |
| GGGAGCGAGAGCTGCTGCAA+GGG | 0.466897 | 4.4:-29265818 | MS.gene56570:CDS |
| GATGGCACCAACCCTCCAAT+TGG | 0.470978 | 4.4:+29266202 | None:intergenic |
| ATGAGAATAACATCCTTAAG+AGG | 0.474735 | 4.4:+29267794 | None:intergenic |
| AGCAGAAGGGGCTGCTGCAG+GGG | 0.477059 | 4.4:-29265839 | MS.gene56570:CDS |
| ACCTTGAGGAGGCTAGAGAC+GGG | 0.482848 | 4.4:-29265078 | MS.gene56570:CDS |
| CGGTGAGAAGGTCTGGTGGC+AGG | 0.483751 | 4.4:-29266244 | MS.gene56570:CDS |
| ATCCTTCCCATCCCCTTACT+CGG | 0.488602 | 4.4:+29264913 | None:intergenic |
| ACCAACCCTCCAATTGGCGT+GGG | 0.488824 | 4.4:+29266208 | None:intergenic |
| AAGAAGAAGCATTGGGTCGC+TGG | 0.490936 | 4.4:-29269739 | MS.gene56570:CDS |
| AATGCTCCGTCAAGAAAAGA+TGG | 0.494895 | 4.4:-29269689 | MS.gene56570:CDS |
| TGGTCAAAATCTGGAGCGTC+GGG | 0.495188 | 4.4:-29265485 | MS.gene56570:CDS |
| GCAGAAGGGGCTGCTGCAGG+GGG | 0.499172 | 4.4:-29265838 | MS.gene56570:CDS |
| GCTTGAAGATGGAGTAGAGT+TGG | 0.501501 | 4.4:-29265176 | MS.gene56570:CDS |
| AAGCCACATCATATTGCGGC+AGG | 0.507122 | 4.4:-29266315 | MS.gene56570:CDS |
| CTTTCAGGAACTTGGCAGCA+AGG | 0.508345 | 4.4:+29266283 | None:intergenic |
| GAGCGTCGGGAAGGCCCACT+TGG | 0.512626 | 4.4:-29265472 | MS.gene56570:CDS |
| AGATAAGCAAGAAGAAGCAT+TGG | 0.512627 | 4.4:-29269747 | MS.gene56570:CDS |
| ATTGAGAGGGAGCTTGAAGA+TGG | 0.513193 | 4.4:-29265187 | MS.gene56570:CDS |
| ATTGAGAGGGAGCTTGAAGA+TGG | 0.513193 | 4.4:-29265328 | MS.gene56570:CDS |
| TTCTTTATGGCCTCGACAAG+GGG | 0.513974 | 4.4:+29266515 | None:intergenic |
| AAAGAAAGATGTAATGGATG+AGG | 0.521411 | 4.4:-29265359 | MS.gene56570:CDS |
| ACAAGATGGACTCGGAAACC+AGG | 0.523113 | 4.4:-29265642 | MS.gene56570:CDS |
| TCCTGCGATGAGTGAAGAGC+AGG | 0.524474 | 4.4:-29265794 | MS.gene56570:CDS |
| CAAGGGGCTTATATGGATGT+TGG | 0.524723 | 4.4:+29266531 | None:intergenic |
| CATGGAACTTTGTTAATGAT+GGG | 0.529596 | 4.4:-29266457 | MS.gene56570:intron |
| TGTCACCCCACGCCAATTGG+AGG | 0.530719 | 4.4:-29266214 | MS.gene56570:CDS |
| GAACAATCGCAAGAGAAAGA+AGG | 0.530737 | 4.4:-29265002 | MS.gene56570:CDS |
| GGGGAGCGAGAGCTGCTGCA+AGG | 0.533292 | 4.4:-29265819 | MS.gene56570:CDS |
| TTGGTCAAAATCTGGAGCGT+CGG | 0.534668 | 4.4:-29265486 | MS.gene56570:CDS |
| AATCAAGATTGACAAAGATA+AGG | 0.536877 | 4.4:-29265431 | MS.gene56570:CDS |
| GACCTTGAGGAGGCTAGAGA+CGG | 0.538134 | 4.4:-29265079 | MS.gene56570:CDS |
| CACCAACCCTCCAATTGGCG+TGG | 0.539896 | 4.4:+29266207 | None:intergenic |
| GGAGCGAGAGCTGCTGCAAG+GGG | 0.545688 | 4.4:-29265817 | MS.gene56570:CDS |
| GCCTGCTCTTCACTCATCGC+AGG | 0.545877 | 4.4:+29265793 | None:intergenic |
| AATGATGGGAGTGCAGAAAT+GGG | 0.546932 | 4.4:-29265682 | MS.gene56570:CDS |
| AACAAGTCTAGCTTCAATGT+TGG | 0.549540 | 4.4:-29265505 | MS.gene56570:CDS |
| AGAAGTTAGCAATCAAATGT+TGG | 0.552225 | 4.4:-29265905 | MS.gene56570:CDS |
| GATAAGCAAGAAGAAGCATT+GGG | 0.552512 | 4.4:-29269746 | MS.gene56570:CDS |
| AGAGAAACTTGTTGCCCCAA+AGG | 0.553413 | 4.4:-29265566 | MS.gene56570:CDS |
| AGTTCCATGCAACTTGTGCA+AGG | 0.554121 | 4.4:+29266471 | None:intergenic |
| TCTGGAGAGTTGCCACATCA+TGG | 0.557018 | 4.4:-29269803 | MS.gene56570:CDS |
| TTTCCACAGATGAGCACTGA+GGG | 0.558715 | 4.4:+29265743 | None:intergenic |
| CTTCTTTATGGCCTCGACAA+GGG | 0.558922 | 4.4:+29266514 | None:intergenic |
| CACAAGGAAGTGAAGCAGAA+GGG | 0.559027 | 4.4:-29265852 | MS.gene56570:CDS |
| AACAATCGCAAGAGAAAGAA+GGG | 0.561015 | 4.4:-29265001 | MS.gene56570:CDS |
| CCCCGTCTCTAGCCTCCTCA+AGG | 0.562396 | 4.4:+29265077 | None:intergenic |
| GATTGACAAAGATAAGGTAA+AGG | 0.564547 | 4.4:-29265425 | MS.gene56570:CDS |
| ACTTCTTTATGGCCTCGACA+AGG | 0.571121 | 4.4:+29266513 | None:intergenic |
| TTATCCTCTGTGCAGCAGCA+GGG | 0.572300 | 4.4:+29267744 | None:intergenic |
| ACGCCCTTGCACAAGTTGCA+TGG | 0.578134 | 4.4:-29266475 | MS.gene56570:CDS |
| TAATTCTGTAGCCTCCTTTG+GGG | 0.580016 | 4.4:+29265552 | None:intergenic |
| CCGAAAACCAAAGCAATGAT+GGG | 0.583069 | 4.4:-29265696 | MS.gene56570:CDS |
| CCGTCAGATGCTCCATGATG+TGG | 0.583282 | 4.4:+29269791 | None:intergenic |
| CAAAATCTGGAGCGTCGGGA+AGG | 0.591685 | 4.4:-29265481 | MS.gene56570:CDS |
| CTTTGGGTGACTGACCAAGT+GGG | 0.592539 | 4.4:+29265458 | None:intergenic |
| AAAGTGAAGCTTCCGTCAGA+CGG | 0.595709 | 4.4:-29266264 | MS.gene56570:CDS |
| CGAGGATGATCTCATTGAGA+GGG | 0.600498 | 4.4:-29265200 | MS.gene56570:CDS |
| TCACAAGGAAGTGAAGCAGA+AGG | 0.601746 | 4.4:-29265853 | MS.gene56570:CDS |
| TCCATATAAGCCCCTTGTCG+AGG | 0.604206 | 4.4:-29266525 | MS.gene56570:CDS |
| GCTTCCGTCAGACGGTGAGA+AGG | 0.605256 | 4.4:-29266256 | MS.gene56570:CDS |
| GTCACCCCACGCCAATTGGA+GGG | 0.605796 | 4.4:-29266213 | MS.gene56570:intron |
| ATTCAAGTCAAAAGCCAAAG+TGG | 0.607668 | 4.4:+29266556 | None:intergenic |
| ACAAGGAAGTGAAGCAGAAG+GGG | 0.610265 | 4.4:-29265851 | MS.gene56570:CDS |
| CTCATGCAAAGAATGACCGA+AGG | 0.612140 | 4.4:-29269131 | MS.gene56570:CDS |
| CCACATCATGGAGCATCTGA+CGG | 0.614623 | 4.4:-29269791 | MS.gene56570:CDS |
| GAAACTTGTTGCCCCAAAGG+AGG | 0.614964 | 4.4:-29265563 | MS.gene56570:CDS |
| AGGAGGCTACAGAATTAGGA+AGG | 0.615379 | 4.4:-29265546 | MS.gene56570:CDS |
| GAGGAGGCTAGAGACGGGGA+TGG | 0.615541 | 4.4:-29265073 | MS.gene56570:CDS |
| TCTTTGGGTGACTGACCAAG+TGG | 0.615707 | 4.4:+29265457 | None:intergenic |
| TGAGGATGATCTCATTGAGA+GGG | 0.615735 | 4.4:-29265341 | MS.gene56570:CDS |
| TGACATTACTGATCACAAGA+TGG | 0.617081 | 4.4:-29265656 | MS.gene56570:CDS |
| AGATCATGGTGAGGACCTTG+AGG | 0.617441 | 4.4:-29265092 | MS.gene56570:CDS |
| TCCACAGATGAGCACTGAGG+GGG | 0.619491 | 4.4:+29265745 | None:intergenic |
| GCTGTTGCTATAGTTACTTG+AGG | 0.621138 | 4.4:+29269189 | None:intergenic |
| CAGACCTTCTCACCGTCTGA+CGG | 0.622614 | 4.4:+29266252 | None:intergenic |
| GTTCCATGCAACTTGTGCAA+GGG | 0.625785 | 4.4:+29266472 | None:intergenic |
| ATGAGGATGATCTCATTGAG+AGG | 0.630170 | 4.4:-29265342 | MS.gene56570:CDS |
| AAAGAAAGATGTAATGGACG+AGG | 0.631127 | 4.4:-29265218 | MS.gene56570:CDS |
| AAGCCTGATGATGAAGATCA+TGG | 0.631489 | 4.4:-29265106 | MS.gene56570:CDS |
| ATAACATCCTTAAGAGGACG+AGG | 0.631649 | 4.4:+29267800 | None:intergenic |
| ACGAGGATGATCTCATTGAG+AGG | 0.632466 | 4.4:-29265201 | MS.gene56570:CDS |
| CAAGATGGACTCGGAAACCA+GGG | 0.633256 | 4.4:-29265641 | MS.gene56570:CDS |
| ATTTAAGCCACATCATATTG+CGG | 0.635161 | 4.4:-29266319 | MS.gene56570:CDS |
| TACTGATCACAAGATGGACT+CGG | 0.641859 | 4.4:-29265650 | MS.gene56570:CDS |
| TGCACAGAGGATAAAACAGA+AGG | 0.652187 | 4.4:-29267735 | MS.gene56570:intron |
| TCATGCAAAGAATGACCGAA+GGG | 0.662631 | 4.4:-29269130 | MS.gene56570:intron |
| CCTTGAGGAGGCTAGAGACG+GGG | 0.664202 | 4.4:-29265077 | MS.gene56570:CDS |
| CCAACCCTCCAATTGGCGTG+GGG | 0.665875 | 4.4:+29266209 | None:intergenic |
| TCATGGTGAGGACCTTGAGG+AGG | 0.679281 | 4.4:-29265089 | MS.gene56570:CDS |
| TTCCACAGATGAGCACTGAG+GGG | 0.694472 | 4.4:+29265744 | None:intergenic |
| AATAGAATTCCACAATCACA+AGG | 0.696079 | 4.4:-29265868 | MS.gene56570:CDS |
| TGATGATGAAGATCATGGTG+AGG | 0.696108 | 4.4:-29265101 | MS.gene56570:CDS |
| CAGACGGTGAGAAGGTCTGG+TGG | 0.696264 | 4.4:-29266248 | MS.gene56570:CDS |
| GCACCTGCCGCAATATGATG+TGG | 0.706575 | 4.4:+29266312 | None:intergenic |
| AAGACCCTGCTGCTGCACAG+AGG | 0.732068 | 4.4:-29267748 | MS.gene56570:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATAATATGTTTATATTTG+TGG | - | chr4.4:29265405-29265424 | MS.gene56570:CDS | 10.0% |
| !!! | ATATTCTAAAAATATGTTTA+AGG | - | chr4.4:29266460-29266479 | MS.gene56570:CDS | 10.0% |
| !!! | GTTGATTATTTTTTTTTTTT+TGG | - | chr4.4:29266667-29266686 | MS.gene56570:intron | 10.0% |
| !!! | TTTATTGAATTCATTTTAAT+AGG | - | chr4.4:29268347-29268366 | MS.gene56570:intron | 10.0% |
| !! | AAACTTAAAAGAATACTTAT+TGG | - | chr4.4:29266839-29266858 | MS.gene56570:intron | 15.0% |
| !! | AACTTAAAAGAATACTTATT+GGG | - | chr4.4:29266840-29266859 | MS.gene56570:intron | 15.0% |
| !! | AAGTTTACTATTATTTAAAC+AGG | - | chr4.4:29268747-29268766 | MS.gene56570:intron | 15.0% |
| !! | AATAAATAGAATTAATTGCA+TGG | - | chr4.4:29267901-29267920 | MS.gene56570:intron | 15.0% |
| !! | GAATAGGAAATAAATATTTA+CGG | + | chr4.4:29265485-29265504 | None:intergenic | 15.0% |
| !! | TCAACAAACAAATATAATAA+GGG | + | chr4.4:29268093-29268112 | None:intergenic | 15.0% |
| !! | TTCAACAAACAAATATAATA+AGG | + | chr4.4:29268094-29268113 | None:intergenic | 15.0% |
| !! | AAAAAAATTCAAAACCAAAC+AGG | + | chr4.4:29265902-29265921 | None:intergenic | 20.0% |
| !! | AAAAACTCAACTTAAAAACA+TGG | + | chr4.4:29266577-29266596 | None:intergenic | 20.0% |
| !! | AACAAATTTCAATATTGAGA+AGG | + | chr4.4:29266429-29266448 | None:intergenic | 20.0% |
| !! | AAGCATGATATCATTAAATA+GGG | - | chr4.4:29267798-29267817 | MS.gene56570:CDS | 20.0% |
| !! | AATCACAAAAATTTCGAATT+CGG | + | chr4.4:29267859-29267878 | None:intergenic | 20.0% |
| !! | ATAGAATTTGTAAATGATGT+AGG | - | chr4.4:29268113-29268132 | MS.gene56570:intron | 20.0% |
| !! | ATATGAATAAAAGAGGTTAT+TGG | - | chr4.4:29267749-29267768 | MS.gene56570:CDS | 20.0% |
| !! | ATCTATCATTCATATAAACT+AGG | + | chr4.4:29266806-29266825 | None:intergenic | 20.0% |
| !! | TAAGCATGATATCATTAAAT+AGG | - | chr4.4:29267797-29267816 | MS.gene56570:CDS | 20.0% |
| !! | TTACATGCATATTATGTATT+TGG | - | chr4.4:29265204-29265223 | MS.gene56570:CDS | 20.0% |
| !!! | AAATTCCTTTTAAATGTACT+TGG | - | chr4.4:29265445-29265464 | MS.gene56570:CDS | 20.0% |
| !!! | AATTCCTTTTAAATGTACTT+GGG | - | chr4.4:29265446-29265465 | MS.gene56570:CDS | 20.0% |
| !!! | AGAAGGTGTTTTAATATTAT+TGG | - | chr4.4:29267028-29267047 | MS.gene56570:intron | 20.0% |
| !!! | AGATAGCTCAAATTTTAAAA+TGG | - | chr4.4:29266080-29266099 | MS.gene56570:intron | 20.0% |
| !!! | ATGCTAATTACAATTTTAGT+TGG | - | chr4.4:29266326-29266345 | MS.gene56570:CDS | 20.0% |
| !!! | CAGAAAGAATTAATTTTACT+TGG | - | chr4.4:29268150-29268169 | MS.gene56570:intron | 20.0% |
| !!! | CTTTCAAATAGATATTTTGT+AGG | - | chr4.4:29265648-29265667 | MS.gene56570:CDS | 20.0% |
| !!! | TTTGTGATTATATTTGAAAC+TGG | - | chr4.4:29267870-29267889 | MS.gene56570:intron | 20.0% |
| !!! | TTTTTTTGCTTGTATTTGAA+AGG | + | chr4.4:29267399-29267418 | None:intergenic | 20.0% |
| ! | AAAAAGCCTAATGAAAAAGT+GGG | + | chr4.4:29268721-29268740 | None:intergenic | 25.0% |
| ! | AAAACCCAAGTACATTTAAA+AGG | + | chr4.4:29265453-29265472 | None:intergenic | 25.0% |
| ! | AAATAGTTCTTACAAAGCTT+AGG | - | chr4.4:29266016-29266035 | MS.gene56570:intron | 25.0% |
| ! | AACAAATATAATAAGGGTCA+TGG | + | chr4.4:29268087-29268106 | None:intergenic | 25.0% |
| ! | AAGTAAAATTAGAACAAGTG+TGG | + | chr4.4:29268329-29268348 | None:intergenic | 25.0% |
| ! | AATCAAGATTGACAAAGATA+AGG | - | chr4.4:29269315-29269334 | MS.gene56570:intron | 25.0% |
| ! | AGAGCAACTATAGAATAAAA+TGG | + | chr4.4:29267962-29267981 | None:intergenic | 25.0% |
| ! | ATAAACAAAATACAAAGAGC+GGG | + | chr4.4:29268060-29268079 | None:intergenic | 25.0% |
| ! | ATACATAATATGCATGTAAC+TGG | + | chr4.4:29265203-29265222 | None:intergenic | 25.0% |
| ! | CACAGATAAATCAAGAAATT+GGG | + | chr4.4:29267087-29267106 | None:intergenic | 25.0% |
| ! | CATATTAGAAAAAAGGAGAA+AGG | - | chr4.4:29269345-29269364 | MS.gene56570:intron | 25.0% |
| ! | CTTAAAGACATTCAAGAAAA+AGG | + | chr4.4:29266600-29266619 | None:intergenic | 25.0% |
| ! | GAAAAGCAAGAAAAAAATGT+TGG | + | chr4.4:29267134-29267153 | None:intergenic | 25.0% |
| ! | GAATCGATGACAAAATATTA+TGG | + | chr4.4:29265582-29265601 | None:intergenic | 25.0% |
| ! | GACAATAAAGAAAGATGTAA+TGG | - | chr4.4:29269522-29269541 | MS.gene56570:intron | 25.0% |
| ! | GATAAACAAAATACAAAGAG+CGG | + | chr4.4:29268061-29268080 | None:intergenic | 25.0% |
| ! | GGAAAAATCATTGTGATAAT+TGG | + | chr4.4:29269815-29269834 | None:intergenic | 25.0% |
| ! | GTTTCATGTGTTGAAATTTA+GGG | - | chr4.4:29267513-29267532 | MS.gene56570:intron | 25.0% |
| ! | TAAAAAGCCTAATGAAAAAG+TGG | + | chr4.4:29268722-29268741 | None:intergenic | 25.0% |
| ! | TAAAGGCCATATTAGAAAAA+AGG | - | chr4.4:29269338-29269357 | MS.gene56570:intron | 25.0% |
| ! | TATTCTTGAAATTCAATTGG+AGG | - | chr4.4:29265500-29265519 | MS.gene56570:CDS | 25.0% |
| ! | TCAAATTAAAAACAACACAC+AGG | + | chr4.4:29265794-29265813 | None:intergenic | 25.0% |
| ! | TCACAGATAAATCAAGAAAT+TGG | + | chr4.4:29267088-29267107 | None:intergenic | 25.0% |
| ! | TCCAACAATATGAATAAAAG+AGG | - | chr4.4:29267742-29267761 | MS.gene56570:CDS | 25.0% |
| ! | TCCAATTGAATTTCAAGAAT+AGG | + | chr4.4:29265501-29265520 | None:intergenic | 25.0% |
| ! | TCCTATTCTTGAAATTCAAT+TGG | - | chr4.4:29265497-29265516 | MS.gene56570:CDS | 25.0% |
| ! | TGTACATTCTTACAAGATTT+AGG | - | chr4.4:29265120-29265139 | MS.gene56570:CDS | 25.0% |
| ! | TGTATAGGATTTCAATATTG+AGG | + | chr4.4:29267302-29267321 | None:intergenic | 25.0% |
| ! | TGTTTCATGTGTTGAAATTT+AGG | - | chr4.4:29267512-29267531 | MS.gene56570:intron | 25.0% |
| ! | TTAGTATGCAAATGAATTGA+GGG | + | chr4.4:29268570-29268589 | None:intergenic | 25.0% |
| !! | AATTAATTTTACTTGGAGAG+AGG | - | chr4.4:29268157-29268176 | MS.gene56570:intron | 25.0% |
| !! | ACCTCTTTTATTCATATTGT+TGG | + | chr4.4:29267746-29267765 | None:intergenic | 25.0% |
| !! | ACTCAGTTTAAGACTATAAT+TGG | + | chr4.4:29267162-29267181 | None:intergenic | 25.0% |
| !! | ATTAATTTTACTTGGAGAGA+GGG | - | chr4.4:29268158-29268177 | MS.gene56570:intron | 25.0% |
| !! | CATACGATTTTGTATCTTAA+TGG | - | chr4.4:29265289-29265308 | MS.gene56570:CDS | 25.0% |
| !!! | ATGTATTTGGAATTCTTTTG+AGG | - | chr4.4:29265217-29265236 | MS.gene56570:CDS | 25.0% |
| !!! | CTTTCTCCTTTTTTCTAATA+TGG | + | chr4.4:29269347-29269366 | None:intergenic | 25.0% |
| !!! | TAGTCAAATTTGCACTTTTT+GGG | - | chr4.4:29266643-29266662 | MS.gene56570:intron | 25.0% |
| !!! | TGTATTTGGAATTCTTTTGA+GGG | - | chr4.4:29265218-29265237 | MS.gene56570:CDS | 25.0% |
| AACACACAAAACTATCCAAT+TGG | + | chr4.4:29268603-29268622 | None:intergenic | 30.0% | |
| AACTCATAGTTTAAGAGCTT+CGG | + | chr4.4:29266046-29266065 | None:intergenic | 30.0% | |
| AAGCTCTTAAACTATGAGTT+GGG | - | chr4.4:29266046-29266065 | MS.gene56570:intron | 30.0% | |
| AATAGAATTCCACAATCACA+AGG | - | chr4.4:29268878-29268897 | MS.gene56570:intron | 30.0% | |
| AATGCAACTTACAAAAGATC+AGG | + | chr4.4:29265686-29265705 | None:intergenic | 30.0% | |
| ACCTAACTTGATATGAAAAC+AGG | + | chr4.4:29268679-29268698 | None:intergenic | 30.0% | |
| AGAAGTTAGCAATCAAATGT+TGG | - | chr4.4:29268841-29268860 | MS.gene56570:intron | 30.0% | |
| AGCAACATTGAACTTCTTTA+TGG | + | chr4.4:29268247-29268266 | None:intergenic | 30.0% | |
| ATCTGTGATCTTATTGCTAT+TGG | - | chr4.4:29267100-29267119 | MS.gene56570:intron | 30.0% | |
| ATGAGAATAACATCCTTAAG+AGG | + | chr4.4:29266955-29266974 | None:intergenic | 30.0% | |
| ATGCAACTTACAAAAGATCA+GGG | + | chr4.4:29265685-29265704 | None:intergenic | 30.0% | |
| ATGGATTCAATGCAGAAAAA+GGG | - | chr4.4:29269692-29269711 | MS.gene56570:CDS | 30.0% | |
| ATTTAAGCCACATCATATTG+CGG | - | chr4.4:29268427-29268446 | MS.gene56570:intron | 30.0% | |
| CATGGAACTTTGTTAATGAT+GGG | - | chr4.4:29268289-29268308 | MS.gene56570:intron | 30.0% | |
| CCTAACTTGATATGAAAACA+GGG | + | chr4.4:29268678-29268697 | None:intergenic | 30.0% | |
| CTATAGAAGAACAACAAATC+TGG | + | chr4.4:29266519-29266538 | None:intergenic | 30.0% | |
| CTTAGTATGCAAATGAATTG+AGG | + | chr4.4:29268571-29268590 | None:intergenic | 30.0% | |
| CTTGAGAAGAGTTTATAAAG+AGG | + | chr4.4:29267585-29267604 | None:intergenic | 30.0% | |
| GACGATAAAGAAAGATGTAA+TGG | - | chr4.4:29269381-29269400 | MS.gene56570:intron | 30.0% | |
| GAGTTACAAAAACACTGTAT+AGG | + | chr4.4:29267317-29267336 | None:intergenic | 30.0% | |
| GATTGACAAAGATAAGGTAA+AGG | - | chr4.4:29269321-29269340 | MS.gene56570:intron | 30.0% | |
| GTATTTGAAAGGAAACAGAA+TGG | + | chr4.4:29267388-29267407 | None:intergenic | 30.0% | |
| TAAACAAAATACAAAGAGCG+GGG | + | chr4.4:29268059-29268078 | None:intergenic | 30.0% | |
| TAACTCATCCTTACAAAAAC+CGG | - | chr4.4:29267538-29267557 | MS.gene56570:intron | 30.0% | |
| TAGTATGCAAATGAATTGAG+GGG | + | chr4.4:29268569-29268588 | None:intergenic | 30.0% | |
| TATGATGTGGCTTAAATTGT+AGG | + | chr4.4:29268424-29268443 | None:intergenic | 30.0% | |
| TCAATCTTGATTGCTTCTTT+GGG | + | chr4.4:29269307-29269326 | None:intergenic | 30.0% | |
| TCCAACAAGTTTATCTTTGT+CGG | + | chr4.4:29269155-29269174 | None:intergenic | 30.0% | |
| TGCAAAAGAAATTCGTCAAT+TGG | + | chr4.4:29266877-29266896 | None:intergenic | 30.0% | |
| TGTTTGTGCAATTGATATAG+TGG | - | chr4.4:29265722-29265741 | MS.gene56570:CDS | 30.0% | |
| ! | ACAATGATTTTTCCGAGTAA+GGG | - | chr4.4:29269821-29269840 | MS.gene56570:CDS | 30.0% |
| ! | ACTAAGAAAGTTGATCCAAT+TGG | - | chr4.4:29268585-29268604 | MS.gene56570:intron | 30.0% |
| ! | GTAGTCAAATTTGCACTTTT+TGG | - | chr4.4:29266642-29266661 | MS.gene56570:intron | 30.0% |
| ! | GTTTTCGTATGTCTTTTACT+CGG | - | chr4.4:29267349-29267368 | MS.gene56570:intron | 30.0% |
| ! | TCAATTCCATCTTTTCTTGA+CGG | + | chr4.4:29265066-29265085 | None:intergenic | 30.0% |
| ! | TCATAATTTGTGCTCAAACA+TGG | - | chr4.4:29267267-29267286 | MS.gene56570:intron | 30.0% |
| ! | TTTTCGTATGTCTTTTACTC+GGG | - | chr4.4:29267350-29267369 | MS.gene56570:intron | 30.0% |
| !! | AAAGAAAGATGTAATGGATG+AGG | - | chr4.4:29269387-29269406 | MS.gene56570:intron | 30.0% |
| !! | AGTCAAATTTGCACTTTTTG+GGG | - | chr4.4:29266644-29266663 | MS.gene56570:intron | 30.0% |
| !! | CAGATTTGTTGTTCTTCTAT+AGG | - | chr4.4:29266517-29266536 | MS.gene56570:CDS | 30.0% |
| !! | GTATTTGGAATTCTTTTGAG+GGG | - | chr4.4:29265219-29265238 | MS.gene56570:CDS | 30.0% |
| !! | GTATTTGTGTAAGTTGATTG+TGG | - | chr4.4:29266773-29266792 | MS.gene56570:intron | 30.0% |
| !!! | AATTGGATAGTTTTGTGTGT+TGG | - | chr4.4:29268602-29268621 | MS.gene56570:intron | 30.0% |
| !!! | AGTTGCATTTTGATTTAGTG+TGG | - | chr4.4:29265697-29265716 | MS.gene56570:CDS | 30.0% |
| !!! | CTTTCTCATTTTTTCTAACG+CGG | + | chr4.4:29269488-29269507 | None:intergenic | 30.0% |
| AAAAAAGGAGAAAGGAACGA+GGG | - | chr4.4:29269353-29269372 | MS.gene56570:intron | 35.0% | |
| AACAATCGCAAGAGAAAGAA+GGG | - | chr4.4:29269745-29269764 | MS.gene56570:CDS | 35.0% | |
| AGAACACTTTGAGTAGAAGT+TGG | + | chr4.4:29266717-29266736 | None:intergenic | 35.0% | |
| AGCTCTTAAACTATGAGTTG+GGG | - | chr4.4:29266047-29266066 | MS.gene56570:intron | 35.0% | |
| AGGCATCACATCATCTATAT+TGG | - | chr4.4:29267244-29267263 | MS.gene56570:intron | 35.0% | |
| AGTTCTATATCTATCCGATG+TGG | - | chr4.4:29267605-29267624 | MS.gene56570:intron | 35.0% | |
| ATATAGCAGTTTGAGTGCAA+TGG | + | chr4.4:29267993-29268012 | None:intergenic | 35.0% | |
| ATCAAGACACACAAGTTCTA+GGG | + | chr4.4:29265981-29266000 | None:intergenic | 35.0% | |
| ATGCCTAGAAACTGACAAAT+TGG | + | chr4.4:29267230-29267249 | None:intergenic | 35.0% | |
| ATTCAAGTCAAAAGCCAAAG+TGG | + | chr4.4:29268193-29268212 | None:intergenic | 35.0% | |
| CAAAATCGTATGTGTATGAG+AGG | + | chr4.4:29265281-29265300 | None:intergenic | 35.0% | |
| CACAAAAATTTCGAATTCGG+TGG | + | chr4.4:29267856-29267875 | None:intergenic | 35.0% | |
| CATGAAACAGATTTCCATGA+AGG | + | chr4.4:29267501-29267520 | None:intergenic | 35.0% | |
| CCAACAAGTTTATCTTTGTC+GGG | + | chr4.4:29269154-29269173 | None:intergenic | 35.0% | |
| CCCATATCAACTAGAGATAT+GGG | - | chr4.4:29266193-29266212 | MS.gene56570:intron | 35.0% | |
| CGCGTTAGAAAAAATGAGAA+AGG | - | chr4.4:29269486-29269505 | MS.gene56570:intron | 35.0% | |
| CTAACTAAATGTCGCAACTT+AGG | - | chr4.4:29267686-29267705 | MS.gene56570:intron | 35.0% | |
| CTAGAAACTGACAAATTGGA+GGG | + | chr4.4:29267226-29267245 | None:intergenic | 35.0% | |
| CTTCAATGTTGGTCAAAATC+TGG | - | chr4.4:29269252-29269271 | MS.gene56570:intron | 35.0% | |
| GAAAAAATGAGAAAGGAACG+AGG | - | chr4.4:29269493-29269512 | MS.gene56570:intron | 35.0% | |
| GAAGCTCTTAAACTATGAGT+TGG | - | chr4.4:29266045-29266064 | MS.gene56570:intron | 35.0% | |
| GAGAAGAGTTTATAAAGAGG+AGG | + | chr4.4:29267582-29267601 | None:intergenic | 35.0% | |
| GCACTCAAACTGCTATATAT+CGG | - | chr4.4:29267995-29268014 | MS.gene56570:intron | 35.0% | |
| GCATGGAACTTTGTTAATGA+TGG | - | chr4.4:29268288-29268307 | MS.gene56570:intron | 35.0% | |
| GTCAATCTTGATTGCTTCTT+TGG | + | chr4.4:29269308-29269327 | None:intergenic | 35.0% | |
| GTCTTTGTCAATCATCTTGT+TGG | + | chr4.4:29269455-29269474 | None:intergenic | 35.0% | |
| GTTCTATATCTATCCGATGT+GGG | - | chr4.4:29267606-29267625 | MS.gene56570:intron | 35.0% | |
| TATAGCAGTTTGAGTGCAAT+GGG | + | chr4.4:29267992-29268011 | None:intergenic | 35.0% | |
| TATGATCCAACAGCAAATCT+AGG | + | chr4.4:29266119-29266138 | None:intergenic | 35.0% | |
| TATTCTTGCAAAGCTCAAGT+TGG | - | chr4.4:29266379-29266398 | MS.gene56570:intron | 35.0% | |
| TCCCATATCAACTAGAGATA+TGG | - | chr4.4:29266192-29266211 | MS.gene56570:intron | 35.0% | |
| TGACATTACTGATCACAAGA+TGG | - | chr4.4:29269090-29269109 | MS.gene56570:intron | 35.0% | |
| TGCAACTTACAAAAGATCAG+GGG | + | chr4.4:29265684-29265703 | None:intergenic | 35.0% | |
| TGGATTCAATGCAGAAAAAG+GGG | - | chr4.4:29269693-29269712 | MS.gene56570:CDS | 35.0% | |
| TTAAACAGGATGCTATCCTT+CGG | - | chr4.4:29268761-29268780 | MS.gene56570:intron | 35.0% | |
| TTGAAGTTGAAATGCTGTGT+TGG | - | chr4.4:29265824-29265843 | MS.gene56570:CDS | 35.0% | |
| ! | AACAAGTCTAGCTTCAATGT+TGG | - | chr4.4:29269241-29269260 | MS.gene56570:intron | 35.0% |
| ! | AGATAAGCAAGAAGAAGCAT+TGG | - | chr4.4:29264999-29265018 | MS.gene56570:CDS | 35.0% |
| ! | CACAAATTTCTGACAGCTTT+TGG | + | chr4.4:29266297-29266316 | None:intergenic | 35.0% |
| ! | CACAATGATTTTTCCGAGTA+AGG | - | chr4.4:29269820-29269839 | MS.gene56570:CDS | 35.0% |
| ! | CCCATATCTCTAGTTGATAT+GGG | + | chr4.4:29266196-29266215 | None:intergenic | 35.0% |
| ! | CCCTGTTTTCATATCAAGTT+AGG | - | chr4.4:29268675-29268694 | MS.gene56570:intron | 35.0% |
| ! | GATGGATTCAATGCAGAAAA+AGG | - | chr4.4:29269691-29269710 | MS.gene56570:CDS | 35.0% |
| ! | GGTTTTTGTAAGGATGAGTT+AGG | + | chr4.4:29267539-29267558 | None:intergenic | 35.0% |
| ! | TGCTACAGTTTGCATGTTTT+TGG | - | chr4.4:29266903-29266922 | MS.gene56570:intron | 35.0% |
| !! | AAAGAAAGATGTAATGGACG+AGG | - | chr4.4:29269528-29269547 | MS.gene56570:intron | 35.0% |
| !! | CGCTTTAAGATTGCATAGTT+GGG | + | chr4.4:29265319-29265338 | None:intergenic | 35.0% |
| !! | GATAAGCAAGAAGAAGCATT+GGG | - | chr4.4:29265000-29265019 | MS.gene56570:CDS | 35.0% |
| !! | GTCAAATTTGCACTTTTTGG+GGG | - | chr4.4:29266645-29266664 | MS.gene56570:intron | 35.0% |
| !!! | TAGGTTTTTTGTTCACACAC+TGG | - | chr4.4:29268366-29268385 | MS.gene56570:intron | 35.0% |
| AAAAACAGCAAGGACTCAGA+AGG | + | chr4.4:29268814-29268833 | None:intergenic | 40.0% | |
| AAAAAGGAGAAAGGAACGAG+GGG | - | chr4.4:29269354-29269373 | MS.gene56570:intron | 40.0% | |
| AAAGAGCGGGGTTAAAAACA+AGG | + | chr4.4:29268047-29268066 | None:intergenic | 40.0% | |
| AACTTACAAAAGATCAGGGG+AGG | + | chr4.4:29265681-29265700 | None:intergenic | 40.0% | |
| AAGCTTCACTTTCAGGAACT+TGG | + | chr4.4:29268474-29268493 | None:intergenic | 40.0% | |
| AATGCTCCGTCAAGAAAAGA+TGG | - | chr4.4:29265057-29265076 | MS.gene56570:CDS | 40.0% | |
| ACAAGGATTCAAAAGCTGAC+AGG | + | chr4.4:29268030-29268049 | None:intergenic | 40.0% | |
| ACCGAAAACCAAAGCAATGA+TGG | - | chr4.4:29269049-29269068 | MS.gene56570:intron | 40.0% | |
| AGAAGAACAACAAATCTGGC+AGG | + | chr4.4:29266515-29266534 | None:intergenic | 40.0% | |
| ATAACATCCTTAAGAGGACG+AGG | + | chr4.4:29266949-29266968 | None:intergenic | 40.0% | |
| ATGAGGATGATCTCATTGAG+AGG | - | chr4.4:29269404-29269423 | MS.gene56570:intron | 40.0% | |
| ATGCAAATGAATTGAGGGGA+TGG | + | chr4.4:29268565-29268584 | None:intergenic | 40.0% | |
| ATTCTATTCGCTTCAAGAGC+AGG | - | chr4.4:29267197-29267216 | MS.gene56570:intron | 40.0% | |
| CAAGGATTCAAAAGCTGACA+GGG | + | chr4.4:29268029-29268048 | None:intergenic | 40.0% | |
| CATCAAGACACACAAGTTCT+AGG | + | chr4.4:29265982-29266001 | None:intergenic | 40.0% | |
| CATTCTGCAAAATGCCTTCA+TGG | - | chr4.4:29267484-29267503 | MS.gene56570:intron | 40.0% | |
| CCCGACAAAGATAAACTTGT+TGG | - | chr4.4:29269151-29269170 | MS.gene56570:CDS | 40.0% | |
| CCGAAAACCAAAGCAATGAT+GGG | - | chr4.4:29269050-29269069 | MS.gene56570:intron | 40.0% | |
| CCTAGAAACTGACAAATTGG+AGG | + | chr4.4:29267227-29267246 | None:intergenic | 40.0% | |
| CCTCCAATTTGTCAGTTTCT+AGG | - | chr4.4:29267224-29267243 | MS.gene56570:intron | 40.0% | |
| CTAATTCTGTAGCCTCCTTT+GGG | + | chr4.4:29269198-29269217 | None:intergenic | 40.0% | |
| GAAAAAAGGAGAAAGGAACG+AGG | - | chr4.4:29269352-29269371 | MS.gene56570:intron | 40.0% | |
| GAACAATCGCAAGAGAAAGA+AGG | - | chr4.4:29269744-29269763 | MS.gene56570:CDS | 40.0% | |
| GCTGTTGCTATAGTTACTTG+AGG | + | chr4.4:29265560-29265579 | None:intergenic | 40.0% | |
| TAATTCTGTAGCCTCCTTTG+GGG | + | chr4.4:29269197-29269216 | None:intergenic | 40.0% | |
| TATGGGCAAAGTAGTCTTTG+AGG | - | chr4.4:29266210-29266229 | MS.gene56570:intron | 40.0% | |
| TCAAGACGTTTCTTCGTTTC+TGG | + | chr4.4:29269790-29269809 | None:intergenic | 40.0% | |
| TCACCATGATCTTCATCATC+AGG | + | chr4.4:29269646-29269665 | None:intergenic | 40.0% | |
| TCATGCAAAGAATGACCGAA+GGG | - | chr4.4:29265616-29265635 | MS.gene56570:CDS | 40.0% | |
| TCTCAAAGCCTACACAATGA+AGG | - | chr4.4:29267642-29267661 | MS.gene56570:intron | 40.0% | |
| TCTGCAAGAGAAAAACAGCA+AGG | + | chr4.4:29268824-29268843 | None:intergenic | 40.0% | |
| TGAGGATGATCTCATTGAGA+GGG | - | chr4.4:29269405-29269424 | MS.gene56570:intron | 40.0% | |
| TGCACAGAGGATAAAACAGA+AGG | - | chr4.4:29267011-29267030 | MS.gene56570:intron | 40.0% | |
| TGGAAATTCCGCCTTAATTG+CGG | + | chr4.4:29267726-29267745 | None:intergenic | 40.0% | |
| TGTGCTCAAACATGGTAGAT+GGG | - | chr4.4:29267275-29267294 | MS.gene56570:intron | 40.0% | |
| TGTGTCTTGATGTCTAGAGA+TGG | - | chr4.4:29265990-29266009 | MS.gene56570:intron | 40.0% | |
| TTGTGCTCAAACATGGTAGA+TGG | - | chr4.4:29267274-29267293 | MS.gene56570:intron | 40.0% | |
| TTTGTTCACACACTGGAAAG+TGG | - | chr4.4:29268373-29268392 | MS.gene56570:intron | 40.0% | |
| ! | AAGCCTGATGATGAAGATCA+TGG | - | chr4.4:29269640-29269659 | MS.gene56570:CDS | 40.0% |
| ! | AATGATGGGAGTGCAGAAAT+GGG | - | chr4.4:29269064-29269083 | MS.gene56570:intron | 40.0% |
| ! | GCCCATATCTCTAGTTGATA+TGG | + | chr4.4:29266197-29266216 | None:intergenic | 40.0% |
| ! | TACTGATCACAAGATGGACT+CGG | - | chr4.4:29269096-29269115 | MS.gene56570:intron | 40.0% |
| ! | TCAAGACACACAAGTTCTAG+GGG | + | chr4.4:29265980-29265999 | None:intergenic | 40.0% |
| ! | TGATGATGAAGATCATGGTG+AGG | - | chr4.4:29269645-29269664 | MS.gene56570:CDS | 40.0% |
| ! | TGGTTTTCGGTTCTTGAAAC+TGG | + | chr4.4:29269040-29269059 | None:intergenic | 40.0% |
| ! | TTTGTCGGGTAACTTTTCTG+AGG | + | chr4.4:29269140-29269159 | None:intergenic | 40.0% |
| !! | CTTACAAAAACCGGCTTGTA+AGG | - | chr4.4:29267547-29267566 | MS.gene56570:intron | 40.0% |
| !! | CTTACAAGCCGGTTTTTGTA+AGG | + | chr4.4:29267549-29267568 | None:intergenic | 40.0% |
| !! | GACTATCCTAGATTTGCTGT+TGG | - | chr4.4:29266110-29266129 | MS.gene56570:intron | 40.0% |
| !! | GCGCTTTAAGATTGCATAGT+TGG | + | chr4.4:29265320-29265339 | None:intergenic | 40.0% |
| !! | TCATTGTGTAGGCTTTGAGA+GGG | + | chr4.4:29267642-29267661 | None:intergenic | 40.0% |
| !! | TTCATTGTGTAGGCTTTGAG+AGG | + | chr4.4:29267643-29267662 | None:intergenic | 40.0% |
| !!! | ACAGTTTGCATGTTTTTGGC+TGG | - | chr4.4:29266907-29266926 | MS.gene56570:intron | 40.0% |
| !!! | CACAGACCCACTTTTTCATT+AGG | - | chr4.4:29268712-29268731 | MS.gene56570:intron | 40.0% |
| !!! | CCCATCATTGCTTTGGTTTT+CGG | + | chr4.4:29269053-29269072 | None:intergenic | 40.0% |
| !!! | GATACATGGTGGATGGTTTT+TGG | - | chr4.4:29265849-29265868 | MS.gene56570:CDS | 40.0% |
| !!! | TGAAGGCATTTTGCAGAATG+CGG | + | chr4.4:29267484-29267503 | None:intergenic | 40.0% |
| !!! | TTGCATGTTTTTGGCTGGAA+AGG | - | chr4.4:29266912-29266931 | MS.gene56570:intron | 40.0% |
| AAAGTGAAGCTTCCGTCAGA+CGG | - | chr4.4:29268482-29268501 | MS.gene56570:intron | 45.0% | |
| ACAAGGAAGTGAAGCAGAAG+GGG | - | chr4.4:29268895-29268914 | MS.gene56570:intron | 45.0% | |
| ACGAGGATGATCTCATTGAG+AGG | - | chr4.4:29269545-29269564 | MS.gene56570:intron | 45.0% | |
| ACTTCTTTATGGCCTCGACA+AGG | + | chr4.4:29268236-29268255 | None:intergenic | 45.0% | |
| AGGAGGCTACAGAATTAGGA+AGG | - | chr4.4:29269200-29269219 | MS.gene56570:intron | 45.0% | |
| AGTTCCATGCAACTTGTGCA+AGG | + | chr4.4:29268278-29268297 | None:intergenic | 45.0% | |
| ATAGTTACTTGAGGCCTGCA+GGG | + | chr4.4:29265551-29265570 | None:intergenic | 45.0% | |
| ATGTCGCAACTTAGGTGACT+AGG | - | chr4.4:29267694-29267713 | MS.gene56570:intron | 45.0% | |
| ATTGAGAGGGAGCTTGAAGA+TGG | - | chr4.4:29269418-29269437 | MS.gene56570:intron | 45.0% | |
| CAAGGGGCTTATATGGATGT+TGG | + | chr4.4:29268218-29268237 | None:intergenic | 45.0% | |
| CACAAGGAAGTGAAGCAGAA+GGG | - | chr4.4:29268894-29268913 | MS.gene56570:intron | 45.0% | |
| CCAAAGGAGGCTACAGAATT+AGG | - | chr4.4:29269196-29269215 | MS.gene56570:intron | 45.0% | |
| CCTAATTCTGTAGCCTCCTT+TGG | + | chr4.4:29269199-29269218 | None:intergenic | 45.0% | |
| CGAGGATGATCTCATTGAGA+GGG | - | chr4.4:29269546-29269565 | MS.gene56570:intron | 45.0% | |
| CTAGATGTACGGTCTTGAGT+GGG | - | chr4.4:29266153-29266172 | MS.gene56570:intron | 45.0% | |
| CTCATGCAAAGAATGACCGA+AGG | - | chr4.4:29265615-29265634 | MS.gene56570:CDS | 45.0% | |
| CTCCAACACCTTCATTGTGT+AGG | + | chr4.4:29267653-29267672 | None:intergenic | 45.0% | |
| CTTCTTTATGGCCTCGACAA+GGG | + | chr4.4:29268235-29268254 | None:intergenic | 45.0% | |
| GAACTTGGCAGCAAGGAAAA+TGG | + | chr4.4:29268459-29268478 | None:intergenic | 45.0% | |
| GCTTCACTTCCTTGTGATTG+TGG | + | chr4.4:29268890-29268909 | None:intergenic | 45.0% | |
| GCTTGAAGATGGAGTAGAGT+TGG | - | chr4.4:29269570-29269589 | MS.gene56570:intron | 45.0% | |
| GTTCCATGCAACTTGTGCAA+GGG | + | chr4.4:29268277-29268296 | None:intergenic | 45.0% | |
| TATAGTTACTTGAGGCCTGC+AGG | + | chr4.4:29265552-29265571 | None:intergenic | 45.0% | |
| TCACAAGGAAGTGAAGCAGA+AGG | - | chr4.4:29268893-29268912 | MS.gene56570:intron | 45.0% | |
| TCTAGATGTACGGTCTTGAG+TGG | - | chr4.4:29266152-29266171 | MS.gene56570:intron | 45.0% | |
| TGTCGCAACTTAGGTGACTA+GGG | - | chr4.4:29267695-29267714 | MS.gene56570:intron | 45.0% | |
| TTCAACTGCAGATGCCTGTT+TGG | - | chr4.4:29265885-29265904 | MS.gene56570:CDS | 45.0% | |
| TTCTTTATGGCCTCGACAAG+GGG | + | chr4.4:29268234-29268253 | None:intergenic | 45.0% | |
| ! | AAGACCGTACATCTAGAGCA+TGG | + | chr4.4:29266149-29266168 | None:intergenic | 45.0% |
| ! | AGCCTACACAATGAAGGTGT+TGG | - | chr4.4:29267648-29267667 | MS.gene56570:intron | 45.0% |
| ! | ATGCTGTGTTGGCAGATACA+TGG | - | chr4.4:29265835-29265854 | MS.gene56570:CDS | 45.0% |
| ! | CAATGATGGGAGTGCAGAAA+TGG | - | chr4.4:29269063-29269082 | MS.gene56570:intron | 45.0% |
| ! | CTGTCCATGCTCTAGATGTA+CGG | - | chr4.4:29266142-29266161 | MS.gene56570:intron | 45.0% |
| ! | TGAAAGCATAACCCACCCTT+CGG | + | chr4.4:29265634-29265653 | None:intergenic | 45.0% |
| ! | TTGGTCAAAATCTGGAGCGT+CGG | - | chr4.4:29269260-29269279 | MS.gene56570:intron | 45.0% |
| !! | AAAAACCGGCTTGTAAGGTG+AGG | - | chr4.4:29267552-29267571 | MS.gene56570:intron | 45.0% |
| !! | AGAGAAACTTGTTGCCCCAA+AGG | - | chr4.4:29269180-29269199 | MS.gene56570:CDS | 45.0% |
| !! | CAAAGTAGTCTTTGAGGCCT+GGG | - | chr4.4:29266216-29266235 | MS.gene56570:CDS | 45.0% |
| !! | CTACACAATGAAGGTGTTGG+AGG | - | chr4.4:29267651-29267670 | MS.gene56570:intron | 45.0% |
| !! | TTCGTTTCTGGTTGACTTGC+TGG | + | chr4.4:29269778-29269797 | None:intergenic | 45.0% |
| !! | TTTCCACAGATGAGCACTGA+GGG | + | chr4.4:29269006-29269025 | None:intergenic | 45.0% |
| !! | TTTTCCACAGATGAGCACTG+AGG | + | chr4.4:29269007-29269026 | None:intergenic | 45.0% |
| !!! | TTGATTATTTTTTTTTTTTT+GGG | - | chr4.4:29266668-29266687 | MS.gene56570:intron | 5.0% |
| AAGCCACATCATATTGCGGC+AGG | - | chr4.4:29268431-29268450 | MS.gene56570:intron | 50.0% | |
| AGAGACTCCTCGTCCTCTTA+AGG | - | chr4.4:29266939-29266958 | MS.gene56570:intron | 50.0% | |
| AGATCATGGTGAGGACCTTG+AGG | - | chr4.4:29269654-29269673 | MS.gene56570:CDS | 50.0% | |
| ATTGTAGCTTCATCCCCTGC+AGG | - | chr4.4:29265534-29265553 | MS.gene56570:CDS | 50.0% | |
| CACACTGGAAAGTGGCTTTC+AGG | - | chr4.4:29268381-29268400 | MS.gene56570:intron | 50.0% | |
| CATTCGTAGAGAGACACCGA+AGG | + | chr4.4:29268780-29268799 | None:intergenic | 50.0% | |
| CTACTGTCACATGTCTCGAC+TGG | - | chr4.4:29268647-29268666 | MS.gene56570:intron | 50.0% | |
| CTGACGGAAGCTTCACTTTC+AGG | + | chr4.4:29268481-29268500 | None:intergenic | 50.0% | |
| CTGCACTCCCATCATTGCTT+TGG | + | chr4.4:29269060-29269079 | None:intergenic | 50.0% | |
| CTTTCAGGAACTTGGCAGCA+AGG | + | chr4.4:29268466-29268485 | None:intergenic | 50.0% | |
| CTTTGGGTGACTGACCAAGT+GGG | + | chr4.4:29269291-29269310 | None:intergenic | 50.0% | |
| GCAAAGAATGACCGAAGGGT+GGG | - | chr4.4:29265620-29265639 | MS.gene56570:CDS | 50.0% | |
| GTCGCAACTTAGGTGACTAG+GGG | - | chr4.4:29267696-29267715 | MS.gene56570:intron | 50.0% | |
| TAGTTACTTGAGGCCTGCAG+GGG | + | chr4.4:29265550-29265569 | None:intergenic | 50.0% | |
| TCAACCCAAAAGCTAGCTCG+AGG | + | chr4.4:29266259-29266278 | None:intergenic | 50.0% | |
| TCCATATAAGCCCCTTGTCG+AGG | - | chr4.4:29268221-29268240 | MS.gene56570:intron | 50.0% | |
| TCTGGAGAGTTGCCACATCA+TGG | - | chr4.4:29264943-29264962 | MS.gene56570:CDS | 50.0% | |
| TCTTTGGGTGACTGACCAAG+TGG | + | chr4.4:29269292-29269311 | None:intergenic | 50.0% | |
| TGCAAAGAATGACCGAAGGG+TGG | - | chr4.4:29265619-29265638 | MS.gene56570:CDS | 50.0% | |
| TGTGAGTGTGAAGATAGCCC+AGG | + | chr4.4:29266236-29266255 | None:intergenic | 50.0% | |
| TTATCCTCTGTGCAGCAGCA+GGG | + | chr4.4:29267005-29267024 | None:intergenic | 50.0% | |
| TTTATCCTCTGTGCAGCAGC+AGG | + | chr4.4:29267006-29267025 | None:intergenic | 50.0% | |
| ! | ACAAGATGGACTCGGAAACC+AGG | - | chr4.4:29269104-29269123 | MS.gene56570:intron | 50.0% |
| ! | CAAGATGGACTCGGAAACCA+GGG | - | chr4.4:29269105-29269124 | MS.gene56570:intron | 50.0% |
| ! | CCACATCATGGAGCATCTGA+CGG | - | chr4.4:29264955-29264974 | MS.gene56570:CDS | 50.0% |
| ! | CTGTGTTGGCAGATACATGG+TGG | - | chr4.4:29265838-29265857 | MS.gene56570:CDS | 50.0% |
| ! | GAGGGTTGTACTTGCCACTT+TGG | - | chr4.4:29268176-29268195 | MS.gene56570:intron | 50.0% |
| ! | GGGTGGATTTAGTCCCACAT+CGG | + | chr4.4:29267622-29267641 | None:intergenic | 50.0% |
| ! | GTTGGCAGATACATGGTGGA+TGG | - | chr4.4:29265842-29265861 | MS.gene56570:CDS | 50.0% |
| ! | TGGTCAAAATCTGGAGCGTC+GGG | - | chr4.4:29269261-29269280 | MS.gene56570:intron | 50.0% |
| !! | AAGAAGAAGCATTGGGTCGC+TGG | - | chr4.4:29265007-29265026 | MS.gene56570:CDS | 50.0% |
| !! | ACAATGAAGGTGTTGGAGGC+TGG | - | chr4.4:29267655-29267674 | MS.gene56570:intron | 50.0% |
| !! | GAAACTTGTTGCCCCAAAGG+AGG | - | chr4.4:29269183-29269202 | MS.gene56570:CDS | 50.0% |
| !! | GCAAAGTAGTCTTTGAGGCC+TGG | - | chr4.4:29266215-29266234 | MS.gene56570:CDS | 50.0% |
| !! | TTCCACAGATGAGCACTGAG+GGG | + | chr4.4:29269005-29269024 | None:intergenic | 50.0% |
| !! | TTCTGAGGTCTGAGAATCCC+TGG | + | chr4.4:29269125-29269144 | None:intergenic | 50.0% |
| !! | TTGTGTAGGCTTTGAGAGGG+TGG | + | chr4.4:29267639-29267658 | None:intergenic | 50.0% |
| !!! | CACACCTCGAGCTAGCTTTT+GGG | - | chr4.4:29266252-29266271 | MS.gene56570:CDS | 50.0% |
| !!! | TCACACCTCGAGCTAGCTTT+TGG | - | chr4.4:29266251-29266270 | MS.gene56570:CDS | 50.0% |
| ACCAACCCTCCAATTGGCGT+GGG | + | chr4.4:29268541-29268560 | None:intergenic | 55.0% | |
| ACCTTGAGGAGGCTAGAGAC+GGG | - | chr4.4:29269668-29269687 | MS.gene56570:CDS | 55.0% | |
| ACGCCCTTGCACAAGTTGCA+TGG | - | chr4.4:29268271-29268290 | MS.gene56570:intron | 55.0% | |
| CAGACCTTCTCACCGTCTGA+CGG | + | chr4.4:29268497-29268516 | None:intergenic | 55.0% | |
| CCGTCAGATGCTCCATGATG+TGG | + | chr4.4:29264958-29264977 | None:intergenic | 55.0% | |
| CTAGGGGCGAACCGCAATTA+AGG | - | chr4.4:29267712-29267731 | MS.gene56570:intron | 55.0% | |
| GACCTTGAGGAGGCTAGAGA+CGG | - | chr4.4:29269667-29269686 | MS.gene56570:CDS | 55.0% | |
| GATGGCACCAACCCTCCAAT+TGG | + | chr4.4:29268547-29268566 | None:intergenic | 55.0% | |
| GCACCTGCCGCAATATGATG+TGG | + | chr4.4:29268437-29268456 | None:intergenic | 55.0% | |
| GCACTCCTCACCTTACAAGC+CGG | + | chr4.4:29267560-29267579 | None:intergenic | 55.0% | |
| GCCTCGACAAGGGGCTTATA+TGG | + | chr4.4:29268225-29268244 | None:intergenic | 55.0% | |
| GGAAAGTGGCTTTCAGGCTG+AGG | - | chr4.4:29268387-29268406 | MS.gene56570:intron | 55.0% | |
| TCATGGTGAGGACCTTGAGG+AGG | - | chr4.4:29269657-29269676 | MS.gene56570:CDS | 55.0% | |
| TCCTGCGATGAGTGAAGAGC+AGG | - | chr4.4:29268952-29268971 | MS.gene56570:intron | 55.0% | |
| TGATGTCACCCCACGCCAAT+TGG | - | chr4.4:29268529-29268548 | MS.gene56570:intron | 55.0% | |
| ! | GGTGTTGGAGGCTGGAATGA+AGG | - | chr4.4:29267663-29267682 | MS.gene56570:intron | 55.0% |
| !! | CAAAATCTGGAGCGTCGGGA+AGG | - | chr4.4:29269265-29269284 | MS.gene56570:intron | 55.0% |
| !! | TCCACAGATGAGCACTGAGG+GGG | + | chr4.4:29269004-29269023 | None:intergenic | 55.0% |
| AAGACCCTGCTGCTGCACAG+AGG | - | chr4.4:29266998-29267017 | MS.gene56570:intron | 60.0% | |
| ACCCCCTCAGTGCTCATCTG+TGG | - | chr4.4:29269000-29269019 | MS.gene56570:intron | 60.0% | |
| CACCAACCCTCCAATTGGCG+TGG | + | chr4.4:29268542-29268561 | None:intergenic | 60.0% | |
| CAGACGGTGAGAAGGTCTGG+TGG | - | chr4.4:29268498-29268517 | MS.gene56570:intron | 60.0% | |
| CCAACCCTCCAATTGGCGTG+GGG | + | chr4.4:29268540-29268559 | None:intergenic | 60.0% | |
| CCTTGAGGAGGCTAGAGACG+GGG | - | chr4.4:29269669-29269688 | MS.gene56570:CDS | 60.0% | |
| CGTCAGACGGTGAGAAGGTC+TGG | - | chr4.4:29268495-29268514 | MS.gene56570:intron | 60.0% | |
| GCCTGCTCTTCACTCATCGC+AGG | + | chr4.4:29268956-29268975 | None:intergenic | 60.0% | |
| GCTTCCGTCAGACGGTGAGA+AGG | - | chr4.4:29268490-29268509 | MS.gene56570:intron | 60.0% | |
| GGGGCGAACCGCAATTAAGG+CGG | - | chr4.4:29267715-29267734 | MS.gene56570:intron | 60.0% | |
| GTCACCCCACGCCAATTGGA+GGG | - | chr4.4:29268533-29268552 | MS.gene56570:intron | 60.0% | |
| TGTCACCCCACGCCAATTGG+AGG | - | chr4.4:29268532-29268551 | MS.gene56570:intron | 60.0% | |
| CCCCACGCCAATTGGAGGGT+TGG | - | chr4.4:29268537-29268556 | MS.gene56570:intron | 65.0% | |
| CCCCGTCTCTAGCCTCCTCA+AGG | + | chr4.4:29269672-29269691 | None:intergenic | 65.0% | |
| CGGTGAGAAGGTCTGGTGGC+AGG | - | chr4.4:29268502-29268521 | MS.gene56570:intron | 65.0% | |
| GAGGAGGCTAGAGACGGGGA+TGG | - | chr4.4:29269673-29269692 | MS.gene56570:CDS | 65.0% | |
| GGAGCGAGAGCTGCTGCAAG+GGG | - | chr4.4:29268929-29268948 | MS.gene56570:intron | 65.0% | |
| GGGAGCGAGAGCTGCTGCAA+GGG | - | chr4.4:29268928-29268947 | MS.gene56570:intron | 65.0% | |
| !! | GAGCGTCGGGAAGGCCCACT+TGG | - | chr4.4:29269274-29269293 | MS.gene56570:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 29264928 | 29269840 | 29264928 | ID=MS.gene56570 |
| chr4.4 | mRNA | 29264928 | 29269840 | 29264928 | ID=MS.gene56570.t1;Parent=MS.gene56570 |
| chr4.4 | exon | 29269611 | 29269840 | 29269611 | ID=MS.gene56570.t1.exon1;Parent=MS.gene56570.t1 |
| chr4.4 | CDS | 29269611 | 29269840 | 29269611 | ID=cds.MS.gene56570.t1;Parent=MS.gene56570.t1 |
| chr4.4 | exon | 29269131 | 29269212 | 29269131 | ID=MS.gene56570.t1.exon2;Parent=MS.gene56570.t1 |
| chr4.4 | CDS | 29269131 | 29269212 | 29269131 | ID=cds.MS.gene56570.t1;Parent=MS.gene56570.t1 |
| chr4.4 | exon | 29267736 | 29267870 | 29267736 | ID=MS.gene56570.t1.exon3;Parent=MS.gene56570.t1 |
| chr4.4 | CDS | 29267736 | 29267870 | 29267736 | ID=cds.MS.gene56570.t1;Parent=MS.gene56570.t1 |
| chr4.4 | exon | 29266458 | 29266633 | 29266458 | ID=MS.gene56570.t1.exon4;Parent=MS.gene56570.t1 |
| chr4.4 | CDS | 29266458 | 29266633 | 29266458 | ID=cds.MS.gene56570.t1;Parent=MS.gene56570.t1 |
| chr4.4 | exon | 29266214 | 29266365 | 29266214 | ID=MS.gene56570.t1.exon5;Parent=MS.gene56570.t1 |
| chr4.4 | CDS | 29266214 | 29266365 | 29266214 | ID=cds.MS.gene56570.t1;Parent=MS.gene56570.t1 |
| chr4.4 | exon | 29264928 | 29265925 | 29264928 | ID=MS.gene56570.t1.exon6;Parent=MS.gene56570.t1 |
| chr4.4 | CDS | 29264928 | 29265925 | 29264928 | ID=cds.MS.gene56570.t1;Parent=MS.gene56570.t1 |
| Gene Sequence |
| Protein sequence |
