Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene56623.t1 | XP_013464426.1 | 92.5 | 757 | 57 | 0 | 1 | 757 | 2 | 758 | 0.00E+00 | 1350.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene56623.t1 | Q93XX4 | 64.9 | 624 | 198 | 9 | 24 | 642 | 21 | 628 | 3.9e-227 | 789.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene56623.t1 | A0A072VA30 | 92.5 | 757 | 57 | 0 | 1 | 757 | 2 | 758 | 0.0e+00 | 1350.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049413 | MS.gene56623 | 0.804364 | 2.24E-49 | -1.69E-46 |
MS.gene051226 | MS.gene56623 | 0.826571 | 2.52E-54 | -1.69E-46 |
MS.gene051959 | MS.gene56623 | 0.851553 | 8.24E-61 | -1.69E-46 |
MS.gene051960 | MS.gene56623 | 0.850877 | 1.28E-60 | -1.69E-46 |
MS.gene054892 | MS.gene56623 | 0.841968 | 3.44E-58 | -1.69E-46 |
MS.gene054893 | MS.gene56623 | 0.842172 | 3.04E-58 | -1.69E-46 |
MS.gene055549 | MS.gene56623 | 0.820042 | 8.45E-53 | -1.69E-46 |
MS.gene055550 | MS.gene56623 | 0.82156 | 3.78E-53 | -1.69E-46 |
MS.gene055551 | MS.gene56623 | 0.803926 | 2.76E-49 | -1.69E-46 |
MS.gene057001 | MS.gene56623 | 0.812979 | 3.23E-51 | -1.69E-46 |
MS.gene057093 | MS.gene56623 | 0.848913 | 4.53E-60 | -1.69E-46 |
MS.gene057622 | MS.gene56623 | 0.838954 | 2.12E-57 | -1.69E-46 |
MS.gene05952 | MS.gene56623 | 0.802584 | 5.24E-49 | -1.69E-46 |
MS.gene06023 | MS.gene56623 | 0.827817 | 1.27E-54 | -1.69E-46 |
MS.gene060964 | MS.gene56623 | 0.988238 | 3.05E-173 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene56623.t1 | MTR_2g072180 | 95.773 | 757 | 32 | 0 | 1 | 757 | 2 | 758 | 0.0 | 1448 |
MS.gene56623.t1 | MTR_2g072180 | 95.359 | 668 | 31 | 0 | 90 | 757 | 1 | 668 | 0.0 | 1261 |
MS.gene56623.t1 | MTR_1g025550 | 26.190 | 294 | 187 | 11 | 71 | 358 | 67 | 336 | 7.48e-18 | 88.2 |
MS.gene56623.t1 | MTR_6g084400 | 32.576 | 132 | 77 | 3 | 275 | 398 | 597 | 724 | 1.01e-15 | 82.0 |
MS.gene56623.t1 | MTR_1g094810 | 25.000 | 292 | 190 | 10 | 71 | 356 | 67 | 335 | 1.05e-15 | 81.3 |
MS.gene56623.t1 | MTR_4g073400 | 25.000 | 276 | 172 | 10 | 71 | 337 | 67 | 316 | 1.58e-14 | 77.4 |
MS.gene56623.t1 | MTR_2g027360 | 46.341 | 82 | 41 | 2 | 288 | 368 | 5 | 84 | 9.88e-14 | 75.9 |
MS.gene56623.t1 | MTR_4g115660 | 22.910 | 323 | 228 | 9 | 68 | 387 | 64 | 368 | 2.21e-13 | 73.9 |
MS.gene56623.t1 | MTR_8g035590 | 26.421 | 299 | 191 | 11 | 73 | 364 | 68 | 344 | 4.37e-13 | 72.8 |
MS.gene56623.t1 | MTR_8g104330 | 30.435 | 115 | 75 | 2 | 284 | 397 | 559 | 669 | 8.55e-13 | 72.4 |
MS.gene56623.t1 | MTR_8g104330 | 30.435 | 115 | 75 | 2 | 284 | 397 | 612 | 722 | 9.85e-13 | 72.4 |
MS.gene56623.t1 | MTR_8g104330 | 30.172 | 116 | 76 | 2 | 284 | 398 | 612 | 723 | 1.12e-12 | 72.0 |
MS.gene56623.t1 | MTR_3g106660 | 22.360 | 322 | 225 | 11 | 72 | 387 | 61 | 363 | 4.04e-12 | 70.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene56623.t1 | AT3G14590 | 67.438 | 648 | 192 | 10 | 23 | 661 | 20 | 657 | 0.0 | 861 |
MS.gene56623.t1 | AT1G53590 | 66.197 | 639 | 189 | 9 | 5 | 635 | 2 | 621 | 0.0 | 860 |
MS.gene56623.t1 | AT3G14590 | 67.727 | 629 | 184 | 10 | 42 | 661 | 8 | 626 | 0.0 | 833 |
MS.gene56623.t1 | AT3G14590 | 67.633 | 621 | 182 | 10 | 50 | 661 | 2 | 612 | 0.0 | 820 |
MS.gene56623.t1 | AT3G14590 | 65.921 | 581 | 179 | 10 | 90 | 661 | 1 | 571 | 0.0 | 741 |
MS.gene56623.t1 | AT3G14590 | 64.865 | 555 | 176 | 10 | 116 | 661 | 25 | 569 | 0.0 | 689 |
MS.gene56623.t1 | AT1G05500 | 24.074 | 324 | 223 | 9 | 68 | 387 | 64 | 368 | 7.42e-17 | 85.1 |
MS.gene56623.t1 | AT5G04220 | 22.393 | 326 | 212 | 11 | 71 | 391 | 5 | 294 | 2.03e-14 | 77.0 |
MS.gene56623.t1 | AT1G03370 | 39.450 | 109 | 60 | 3 | 287 | 391 | 4 | 110 | 5.10e-14 | 76.6 |
MS.gene56623.t1 | AT1G03370 | 39.450 | 109 | 60 | 3 | 287 | 391 | 4 | 110 | 5.49e-14 | 76.6 |
MS.gene56623.t1 | AT5G04220 | 22.393 | 326 | 212 | 11 | 71 | 391 | 67 | 356 | 6.04e-14 | 75.9 |
MS.gene56623.t1 | AT1G20080 | 23.247 | 271 | 179 | 9 | 71 | 335 | 67 | 314 | 7.53e-14 | 75.5 |
MS.gene56623.t1 | AT1G20080 | 23.247 | 271 | 179 | 9 | 71 | 335 | 67 | 314 | 7.53e-14 | 75.5 |
MS.gene56623.t1 | AT1G20080 | 23.247 | 271 | 179 | 9 | 71 | 335 | 67 | 314 | 7.53e-14 | 75.5 |
MS.gene56623.t1 | AT1G20080 | 23.247 | 271 | 179 | 9 | 71 | 335 | 67 | 314 | 7.53e-14 | 75.5 |
MS.gene56623.t1 | AT1G20080 | 23.247 | 271 | 179 | 9 | 71 | 335 | 67 | 314 | 7.53e-14 | 75.5 |
MS.gene56623.t1 | AT3G18370 | 34.545 | 110 | 67 | 2 | 290 | 398 | 611 | 716 | 5.22e-13 | 73.2 |
MS.gene56623.t1 | AT3G61050 | 23.794 | 311 | 207 | 11 | 73 | 376 | 68 | 355 | 1.35e-11 | 68.2 |
MS.gene56623.t1 | AT3G61050 | 23.794 | 311 | 207 | 11 | 73 | 376 | 68 | 355 | 1.35e-11 | 68.2 |
Find 167 sgRNAs with CRISPR-Local
Find 400 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTGAATTCCTCTTGCCATTT+TGG | 0.089795 | 2.1:-26814641 | None:intergenic |
TTCTGTTCAGCACCTATATT+TGG | 0.118354 | 2.1:+26813114 | MS.gene56623:CDS |
ACTTTAGTTCTTGCATCTTT+TGG | 0.183440 | 2.1:-26817853 | None:intergenic |
ATCTGGAAAATCTCCAAAAT+TGG | 0.203589 | 2.1:+26817171 | MS.gene56623:CDS |
TCATAGTTATCTGCCAATTT+TGG | 0.215229 | 2.1:-26817184 | None:intergenic |
AAGAAATGGTGGCAGATAAA+AGG | 0.236308 | 2.1:+26818082 | MS.gene56623:CDS |
CACCTTTGATTACTGATATC+AGG | 0.238503 | 2.1:+26813146 | MS.gene56623:CDS |
GGCTTTGATCTATCTTTATC+TGG | 0.247822 | 2.1:+26811719 | MS.gene56623:CDS |
AACCACATTCACATCGGATT+TGG | 0.255125 | 2.1:-26817953 | None:intergenic |
ATTTGGGGAACTTCGCTTCC+TGG | 0.256187 | 2.1:-26817256 | None:intergenic |
TCTCTCTTTGCCGGGCTATC+AGG | 0.263166 | 2.1:-26817658 | None:intergenic |
AACCTCATTAACATCGGATT+TGG | 0.269470 | 2.1:-26817914 | None:intergenic |
TCCTTGACGTCTCTCTTTGC+CGG | 0.274210 | 2.1:-26817667 | None:intergenic |
ATTTCGTAGGAGTCGGAAAA+TGG | 0.284800 | 2.1:+26817468 | MS.gene56623:CDS |
AGAAAACACTTTCTCCAAAA+TGG | 0.300673 | 2.1:+26814627 | MS.gene56623:CDS |
ACCACATTCACATCGGATTT+GGG | 0.307145 | 2.1:-26817952 | None:intergenic |
GGCTGTAATTCAACTGTATC+TGG | 0.309334 | 2.1:+26817349 | MS.gene56623:CDS |
AACATCAACAACCAGCATAT+TGG | 0.311236 | 2.1:-26814140 | None:intergenic |
TTGACAGTCATCTGAAAATA+TGG | 0.314441 | 2.1:-26813689 | None:intergenic |
ACCTCATTAACATCGGATTT+GGG | 0.316761 | 2.1:-26817913 | None:intergenic |
TCCTTATGTGAAAGGTCATT+TGG | 0.327934 | 2.1:+26814574 | MS.gene56623:CDS |
CTTCAATGTCTATTGTCTCT+TGG | 0.331491 | 2.1:-26817090 | None:intergenic |
CTTTCCGACTGGTAAGATTC+AGG | 0.339765 | 2.1:+26817606 | MS.gene56623:CDS |
TCCTTCTCATCCGTTTCATC+TGG | 0.345735 | 2.1:+26817154 | MS.gene56623:CDS |
CATCTCCACGTGATAACATT+AGG | 0.350904 | 2.1:+26817524 | MS.gene56623:CDS |
CGGAAAATGGACGATAATTC+AGG | 0.353749 | 2.1:+26817481 | MS.gene56623:CDS |
TCTAAGAACCATGGTATGAT+AGG | 0.363312 | 2.1:-26812843 | None:intergenic |
ACATCAACAACCAGCATATT+GGG | 0.372605 | 2.1:-26814139 | None:intergenic |
TCAATGCAGGTTCTTGAGTT+AGG | 0.375126 | 2.1:+26813282 | MS.gene56623:intron |
ATGAAGCCATCAGATCTAAA+TGG | 0.379168 | 2.1:+26814457 | MS.gene56623:CDS |
GGTCAGTAAATGCTTCTAAA+GGG | 0.385901 | 2.1:+26817545 | MS.gene56623:CDS |
ACAAGCCAGCCAGCAATTCC+TGG | 0.385953 | 2.1:-26813749 | None:intergenic |
GATGGAAAGTCCTGCGCAAT+AGG | 0.388349 | 2.1:-26817505 | None:intergenic |
CATTTCTATGATGACATCCT+TGG | 0.399030 | 2.1:+26814725 | MS.gene56623:CDS |
GGTTGGCGTGAAGTTTGTTA+TGG | 0.403419 | 2.1:+26817567 | MS.gene56623:CDS |
GTTACAATCCCATGTTATGA+TGG | 0.407165 | 2.1:-26814669 | None:intergenic |
AATAACAGTTCTTGATGATA+AGG | 0.416703 | 2.1:+26815341 | MS.gene56623:CDS |
AAACATATGGCCTATATGTA+TGG | 0.422201 | 2.1:+26812791 | MS.gene56623:CDS |
AGAAATGGTGGCAGATAAAA+GGG | 0.422355 | 2.1:+26818083 | MS.gene56623:CDS |
CAAATATCTTTACCTTGGTC+TGG | 0.430139 | 2.1:-26814178 | None:intergenic |
ACAGAACTTCCAGGAATTGC+TGG | 0.430424 | 2.1:+26813740 | MS.gene56623:CDS |
CAAGGATGTCATCATAGAAA+TGG | 0.432627 | 2.1:-26814724 | None:intergenic |
GTGGGTTTCTTCCCAAATAT+AGG | 0.432753 | 2.1:-26813126 | None:intergenic |
ATCTTATTGTTATAGAGCCT+TGG | 0.437260 | 2.1:+26814371 | MS.gene56623:intron |
CCTTATGTGAAAGGTCATTT+GGG | 0.442994 | 2.1:+26814575 | MS.gene56623:CDS |
GCAATCTGTTCCATACATAT+AGG | 0.443303 | 2.1:-26812801 | None:intergenic |
TCTGTTCAGCACCTATATTT+GGG | 0.444459 | 2.1:+26813115 | MS.gene56623:CDS |
CTTGATGTGACAGAACTTCC+AGG | 0.446186 | 2.1:+26813731 | MS.gene56623:CDS |
AGGAAAGGCCTGCACAAAAT+CGG | 0.446259 | 2.1:+26817439 | MS.gene56623:CDS |
TCCAAACACCTGTCTTCTCT+TGG | 0.447465 | 2.1:-26817225 | None:intergenic |
GCCAAGAGAAGACAGGTGTT+TGG | 0.448255 | 2.1:+26817224 | MS.gene56623:CDS |
CCTTGACGTCTCTCTTTGCC+GGG | 0.450193 | 2.1:-26817666 | None:intergenic |
ACTGCTGCTGTCATTGTTCA+AGG | 0.451580 | 2.1:-26817374 | None:intergenic |
ATTTGGGAGGATATAGATTC+AGG | 0.451759 | 2.1:+26814591 | MS.gene56623:CDS |
CGAACATGATAAAGAAGAAA+TGG | 0.452429 | 2.1:+26818068 | MS.gene56623:CDS |
GTCAACAAAGCTGCATATAA+CGG | 0.454586 | 2.1:+26813380 | MS.gene56623:CDS |
CCCAAATGACCTTTCACATA+AGG | 0.456580 | 2.1:-26814575 | None:intergenic |
ATGGGATTGTAACAATGTTC+TGG | 0.457201 | 2.1:+26814679 | MS.gene56623:CDS |
TCAACAAAGCTGCATATAAC+GGG | 0.457469 | 2.1:+26813381 | MS.gene56623:CDS |
ATTTCTATGATGACATCCTT+GGG | 0.460075 | 2.1:+26814726 | MS.gene56623:CDS |
GGATGAGAAGGAACCTTTGT+TGG | 0.462679 | 2.1:-26817143 | None:intergenic |
ATGTTCTTTCTCGTAAATCA+AGG | 0.468368 | 2.1:+26817743 | MS.gene56623:CDS |
ACCATGCAGTTGAAAACATA+TGG | 0.471248 | 2.1:+26812778 | MS.gene56623:CDS |
AGGTCAGTAAATGCTTCTAA+AGG | 0.471451 | 2.1:+26817544 | MS.gene56623:CDS |
TCGTATACGTGTATGCTTTG+TGG | 0.474265 | 2.1:+26813661 | MS.gene56623:CDS |
AACACTGCTGGCTTTCCGAC+TGG | 0.476491 | 2.1:+26817595 | MS.gene56623:CDS |
CTTGTTGACCACAGTGGTGT+TGG | 0.476585 | 2.1:-26817989 | None:intergenic |
GAAAACAATCTAATCAAAGA+AGG | 0.477365 | 2.1:+26812251 | MS.gene56623:CDS |
AACATCGAATGAAAACTGTT+AGG | 0.484264 | 2.1:+26817419 | MS.gene56623:CDS |
GTTTCAATCTTGCATCATGC+TGG | 0.486325 | 2.1:+26811630 | MS.gene56623:CDS |
AACTTCCAGGAATTGCTGGC+TGG | 0.486710 | 2.1:+26813744 | MS.gene56623:CDS |
ACTGGTAAGATTCAGGTAGA+AGG | 0.487108 | 2.1:+26817613 | MS.gene56623:CDS |
TTACAGCCACATATATCGTT+AGG | 0.490040 | 2.1:-26817334 | None:intergenic |
TATAGAGCCTTGGTTTAAAG+TGG | 0.492151 | 2.1:+26814381 | MS.gene56623:intron |
TTATCTTCAGCATTATCATC+GGG | 0.493511 | 2.1:-26817397 | None:intergenic |
TTTCTGATTCTGAAACAGTT+CGG | 0.494262 | 2.1:+26812748 | MS.gene56623:CDS |
AAATTTGCAGCCCAATATGC+TGG | 0.498130 | 2.1:+26814129 | MS.gene56623:intron |
CCCTCTGAATTTCTGTGTCG+AGG | 0.498634 | 2.1:-26817309 | None:intergenic |
CCCCAAATCCGATGTTAATG+AGG | 0.499459 | 2.1:+26817912 | MS.gene56623:CDS |
TAGTAACCATTTAGATCTGA+TGG | 0.506393 | 2.1:-26814463 | None:intergenic |
CGTAAATCAAGGAAATCAAA+AGG | 0.517549 | 2.1:+26817754 | MS.gene56623:CDS |
TTTATCTTCAGCATTATCAT+CGG | 0.518677 | 2.1:-26817398 | None:intergenic |
AACGTTATGTTACAAGGCTA+AGG | 0.518852 | 2.1:+26812206 | MS.gene56623:CDS |
CAAATGTGGGAGCCAAGAAA+AGG | 0.519554 | 2.1:+26817274 | MS.gene56623:CDS |
ATAACGGGAATGCATGTTGA+AGG | 0.519584 | 2.1:+26813396 | MS.gene56623:CDS |
AGTTCTTGATGATAAGGAAA+AGG | 0.524058 | 2.1:+26815347 | MS.gene56623:CDS |
AAGAACTAAAGTTGTTTCAC+AGG | 0.527604 | 2.1:+26817864 | MS.gene56623:CDS |
ACCTTTGATTACTGATATCA+GGG | 0.529556 | 2.1:+26813147 | MS.gene56623:CDS |
TCCAGATGAAACGGATGAGA+AGG | 0.532280 | 2.1:-26817155 | None:intergenic |
TTTCTTGGCTCCCACATTTG+GGG | 0.533313 | 2.1:-26817271 | None:intergenic |
GGTCAACAAGGAGCCTCAAA+AGG | 0.533735 | 2.1:+26818002 | MS.gene56623:CDS |
CTAAGAACCATGGTATGATA+GGG | 0.535211 | 2.1:-26812842 | None:intergenic |
TTCATGAACGTTATGTTACA+AGG | 0.536010 | 2.1:+26812200 | MS.gene56623:CDS |
AGGGAGTAGTCCTGATAGCC+CGG | 0.536743 | 2.1:+26817648 | MS.gene56623:CDS |
TTACAATCCCATGTTATGAT+GGG | 0.539219 | 2.1:-26814668 | None:intergenic |
TTGACCACAGTGGTGTTGGA+TGG | 0.548005 | 2.1:-26817985 | None:intergenic |
GTTATGGATGATAACACTGC+TGG | 0.548074 | 2.1:+26817583 | MS.gene56623:CDS |
GCCATTGCTCAAGGTAACAT+TGG | 0.548679 | 2.1:+26817886 | MS.gene56623:CDS |
CTCATTAACATCGGATTTGG+GGG | 0.549929 | 2.1:-26817911 | None:intergenic |
TCTTAGAGAAGTACAAACCT+TGG | 0.551181 | 2.1:+26812859 | MS.gene56623:CDS |
TGAGAAGGAACCTTTGTTGG+TGG | 0.551198 | 2.1:-26817140 | None:intergenic |
ACACGTATACGACCAAGAAA+AGG | 0.551448 | 2.1:-26813650 | None:intergenic |
GTTTCACAGGCCATTGCTCA+AGG | 0.552763 | 2.1:+26817877 | MS.gene56623:CDS |
CTAATGTTATCACGTGGAGA+TGG | 0.553752 | 2.1:-26817523 | None:intergenic |
GAAGCGAAGTTCCCCAAATG+TGG | 0.562195 | 2.1:+26817260 | MS.gene56623:CDS |
CCTCATTAACATCGGATTTG+GGG | 0.563282 | 2.1:-26817912 | None:intergenic |
CTGATTCTGAAACAGTTCGG+TGG | 0.563534 | 2.1:+26812751 | MS.gene56623:CDS |
GTAAATGCTTCTAAAGGGGT+TGG | 0.564255 | 2.1:+26817550 | MS.gene56623:CDS |
AAAAGGCATTCTCCCCTGAA+AGG | 0.566489 | 2.1:+26818019 | MS.gene56623:CDS |
TTCTCGTCCACTTTAAACCA+AGG | 0.567039 | 2.1:-26814388 | None:intergenic |
TAATTCAGGTCCTATTGCGC+AGG | 0.567039 | 2.1:+26817495 | MS.gene56623:CDS |
CCACATTCACATCGGATTTG+GGG | 0.569763 | 2.1:-26817951 | None:intergenic |
AAATCGGTTCTGTATTTCGT+AGG | 0.570323 | 2.1:+26817455 | MS.gene56623:CDS |
CTGATATCAGTAATCAAAGG+TGG | 0.571778 | 2.1:-26813145 | None:intergenic |
CACATTCACATCGGATTTGG+GGG | 0.573608 | 2.1:-26817950 | None:intergenic |
TCAGAATTCCCATCATAACA+TGG | 0.575057 | 2.1:+26814660 | MS.gene56623:CDS |
CCCCAAATCCGATGTGAATG+TGG | 0.579254 | 2.1:+26817951 | MS.gene56623:CDS |
GTTCTGTATTTCGTAGGAGT+CGG | 0.580650 | 2.1:+26817461 | MS.gene56623:CDS |
CAGAATTCCCATCATAACAT+GGG | 0.581021 | 2.1:+26814661 | MS.gene56623:CDS |
GCAAATGAGACCACCAACAA+AGG | 0.582885 | 2.1:+26817130 | MS.gene56623:CDS |
GGTTATTGAAGTTCGTGACA+AGG | 0.583121 | 2.1:+26814700 | MS.gene56623:CDS |
ACCAATGTTACCTTGAGCAA+TGG | 0.583614 | 2.1:-26817887 | None:intergenic |
AAAGAGAGACGTCAAGGACA+TGG | 0.585649 | 2.1:+26817672 | MS.gene56623:CDS |
GTCAGTAAATGCTTCTAAAG+GGG | 0.587217 | 2.1:+26817546 | MS.gene56623:CDS |
AGACTTCACTCACCTCAACA+AGG | 0.587867 | 2.1:-26813948 | None:intergenic |
TTGGTTTAAAGTGGACGAGA+AGG | 0.592908 | 2.1:+26814390 | MS.gene56623:CDS |
AAGGGTCTGTTCAAACGCAA+TGG | 0.593233 | 2.1:-26813929 | None:intergenic |
ATTGAAGGCCAAGAGAAGAC+AGG | 0.595022 | 2.1:+26817217 | MS.gene56623:CDS |
GGGAATGCATGTTGAAGGGA+AGG | 0.595088 | 2.1:+26813401 | MS.gene56623:CDS |
GGGTGAAGTTCCTCAAGGAA+TGG | 0.596250 | 2.1:+26813627 | MS.gene56623:CDS |
AAAACAATCTAATCAAAGAA+GGG | 0.596262 | 2.1:+26812252 | MS.gene56623:CDS |
GTAGAAGGTGGATCAACGGA+AGG | 0.599566 | 2.1:+26817628 | MS.gene56623:CDS |
CAACACCACTGTGGTCAACA+AGG | 0.602995 | 2.1:+26817990 | MS.gene56623:CDS |
GCCTCGACACAGAAATTCAG+AGG | 0.603945 | 2.1:+26817308 | MS.gene56623:CDS |
TCAGGTAGAAGGTGGATCAA+CGG | 0.609378 | 2.1:+26817624 | MS.gene56623:CDS |
CGAATGAAAACTGTTAGGAA+AGG | 0.609904 | 2.1:+26817424 | MS.gene56623:CDS |
ATGAATCATACAGCAGTCCA+AGG | 0.611982 | 2.1:-26812876 | None:intergenic |
GGTAAGATTCAGGTAGAAGG+TGG | 0.612543 | 2.1:+26817616 | MS.gene56623:CDS |
ATGACCTTTCACATAAGGAT+CGG | 0.615098 | 2.1:-26814570 | None:intergenic |
TTAGCCGATCCTTATGTGAA+AGG | 0.615463 | 2.1:+26814566 | MS.gene56623:CDS |
CAAGAAAAGGCCATTCCTTG+AGG | 0.616347 | 2.1:-26813637 | None:intergenic |
AGGGAACCTAACGATATATG+TGG | 0.618706 | 2.1:+26817328 | MS.gene56623:CDS |
TATGTGAAAGGTCATTTGGG+AGG | 0.619001 | 2.1:+26814578 | MS.gene56623:CDS |
TAACGGGAATGCATGTTGAA+GGG | 0.621171 | 2.1:+26813397 | MS.gene56623:CDS |
CCCGGCAAAGAGAGACGTCA+AGG | 0.621860 | 2.1:+26817666 | MS.gene56623:CDS |
GGTGTTTGGATACATCAGCC+AGG | 0.623254 | 2.1:+26817238 | MS.gene56623:CDS |
ACCCTGATATCAGTAATCAA+AGG | 0.627115 | 2.1:-26813148 | None:intergenic |
AAGCGAAGTTCCCCAAATGT+GGG | 0.628739 | 2.1:+26817261 | MS.gene56623:CDS |
CCAGTGTGATGATGACCACT+TGG | 0.631960 | 2.1:+26813177 | MS.gene56623:CDS |
ACTTTCTCCAAAATGGCAAG+AGG | 0.641409 | 2.1:+26814634 | MS.gene56623:CDS |
TGATATCAGTAATCAAAGGT+GGG | 0.644175 | 2.1:-26813144 | None:intergenic |
TTGTACTTCTCTAAGAACCA+TGG | 0.644582 | 2.1:-26812852 | None:intergenic |
GACTTCACTCACCTCAACAA+GGG | 0.645139 | 2.1:-26813947 | None:intergenic |
ATTGTGAACCTCATTAACAT+CGG | 0.648603 | 2.1:-26817920 | None:intergenic |
GGTAGGGGTGAAGTTCCTCA+AGG | 0.658397 | 2.1:+26813622 | MS.gene56623:CDS |
GTTTGAACAGACCCTTGTTG+AGG | 0.662889 | 2.1:+26813936 | MS.gene56623:CDS |
TAGAAGGTGGATCAACGGAA+GGG | 0.663587 | 2.1:+26817629 | MS.gene56623:CDS |
TCTACCTGAATCTTACCAGT+CGG | 0.664384 | 2.1:-26817610 | None:intergenic |
ACATGATAAAGAAGAAATGG+TGG | 0.668596 | 2.1:+26818071 | MS.gene56623:CDS |
ACAGTCATCTGAAAATATGG+AGG | 0.673844 | 2.1:-26813686 | None:intergenic |
CCAAGTGGTCATCATCACAC+TGG | 0.674932 | 2.1:-26813177 | None:intergenic |
AGGCTCCTTGTTGACCACAG+TGG | 0.684496 | 2.1:-26817995 | None:intergenic |
ATTGTGAACCACATTCACAT+CGG | 0.691176 | 2.1:-26817959 | None:intergenic |
CCTCGACACAGAAATTCAGA+GGG | 0.702383 | 2.1:+26817309 | MS.gene56623:CDS |
AAATTTGTATCACCAGACCA+AGG | 0.724755 | 2.1:+26814166 | MS.gene56623:CDS |
ACTGACCTAATGTTATCACG+TGG | 0.727696 | 2.1:-26817529 | None:intergenic |
TGTGCCATCCAACACCACTG+TGG | 0.765001 | 2.1:+26817981 | MS.gene56623:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TATTTACAATGAAAATAAAA+TGG | + | chr2.1:26816897-26816916 | MS.gene56623:intron | 10.0% |
!! | TGGAAATATATTTATTATTA+TGG | - | chr2.1:26816127-26816146 | None:intergenic | 10.0% |
!!! | AATGATATCTAAAATAAAAT+TGG | - | chr2.1:26816012-26816031 | None:intergenic | 10.0% |
!!! | AATTTTATTTTAGATATCAT+TGG | + | chr2.1:26816011-26816030 | MS.gene56623:intron | 10.0% |
!!! | TTGTCTTATTTATATATAAA+GGG | + | chr2.1:26812090-26812109 | MS.gene56623:intron | 10.0% |
!!! | TTTATATATTTTACATAACT+TGG | + | chr2.1:26814001-26814020 | MS.gene56623:intron | 10.0% |
!!! | TTTATATTTGTTTTTTCTAT+AGG | + | chr2.1:26813595-26813614 | MS.gene56623:intron | 10.0% |
!!! | TTTGTCTTATTTATATATAA+AGG | + | chr2.1:26812089-26812108 | MS.gene56623:intron | 10.0% |
!! | AAAAATAAAATATATGTAGC+TGG | + | chr2.1:26816052-26816071 | MS.gene56623:intron | 15.0% |
!! | AACAAATTATAGTATATTTC+AGG | + | chr2.1:26814542-26814561 | MS.gene56623:intron | 15.0% |
!! | AATACAATATAGAAATAAGA+GGG | - | chr2.1:26815526-26815545 | None:intergenic | 15.0% |
!! | AATTTGATTATTATATGCTT+TGG | + | chr2.1:26811830-26811849 | MS.gene56623:intron | 15.0% |
!! | ATATTTATTATTATGGTCAA+TGG | - | chr2.1:26816120-26816139 | None:intergenic | 15.0% |
!! | TGAACAATTAAAAATATAAC+AGG | - | chr2.1:26814110-26814129 | None:intergenic | 15.0% |
!!! | AAAGAATATTTTCAAAAATG+CGG | + | chr2.1:26817696-26817715 | MS.gene56623:CDS | 15.0% |
!!! | ATTCAAAGATTTGTTTAATA+AGG | - | chr2.1:26814280-26814299 | None:intergenic | 15.0% |
!!! | TCTTTTTGTTTCTAAAAATT+GGG | - | chr2.1:26816581-26816600 | None:intergenic | 15.0% |
!!! | TTCTTTTTGTTTCTAAAAAT+TGG | - | chr2.1:26816582-26816601 | None:intergenic | 15.0% |
!! | AAAACAATCTAATCAAAGAA+GGG | + | chr2.1:26812252-26812271 | MS.gene56623:CDS | 20.0% |
!! | AAAGCAAATGTATATTAACA+AGG | - | chr2.1:26814983-26815002 | None:intergenic | 20.0% |
!! | AACAATAGATCAAATAACAA+AGG | - | chr2.1:26817016-26817035 | None:intergenic | 20.0% |
!! | AAGAAACCATAATATATGAA+AGG | - | chr2.1:26813006-26813025 | None:intergenic | 20.0% |
!! | AATATATGAAAGGAACAAAA+AGG | - | chr2.1:26812996-26813015 | None:intergenic | 20.0% |
!! | AATGAAAAAATTGTTATGTC+TGG | + | chr2.1:26818045-26818064 | MS.gene56623:CDS | 20.0% |
!! | AGATTGAATATCATGAAAAA+AGG | - | chr2.1:26815966-26815985 | None:intergenic | 20.0% |
!! | ATATACAAGTTTCACATTAT+TGG | - | chr2.1:26815426-26815445 | None:intergenic | 20.0% |
!! | ATATTATAACTTCTAGATTC+AGG | + | chr2.1:26815681-26815700 | MS.gene56623:intron | 20.0% |
!! | CTCTATAACAATAAGATTTA+TGG | - | chr2.1:26814368-26814387 | None:intergenic | 20.0% |
!! | GAATACAATATAGAAATAAG+AGG | - | chr2.1:26815527-26815546 | None:intergenic | 20.0% |
!! | TTTGTTCCTTTCATATATTA+TGG | + | chr2.1:26812997-26813016 | MS.gene56623:intron | 20.0% |
!!! | AATATATTTTCACTAGATGT+CGG | + | chr2.1:26814927-26814946 | MS.gene56623:intron | 20.0% |
!!! | ATAAGGTTTCTATTGATTAA+AGG | + | chr2.1:26812405-26812424 | MS.gene56623:intron | 20.0% |
!!! | ATAAGTACATATGTTTGTTT+TGG | - | chr2.1:26816147-26816166 | None:intergenic | 20.0% |
!!! | ATTTACTAATATAACTTGCA+TGG | + | chr2.1:26812698-26812717 | MS.gene56623:intron | 20.0% |
!!! | CAATTTTGAATTATGTTTAC+AGG | + | chr2.1:26817048-26817067 | MS.gene56623:intron | 20.0% |
!!! | TATGCTATACTTTTTGATTT+TGG | + | chr2.1:26811792-26811811 | MS.gene56623:intron | 20.0% |
!!! | TCAATGACTAATGATTTTAA+CGG | - | chr2.1:26814224-26814243 | None:intergenic | 20.0% |
!!! | TCTATTGATTAAAGGATAAA+AGG | + | chr2.1:26812413-26812432 | MS.gene56623:intron | 20.0% |
!!! | TTGTGTTTGTTTTAATAGTT+GGG | - | chr2.1:26815761-26815780 | None:intergenic | 20.0% |
!!! | TTTTAATAGTTGGGAATTAA+GGG | - | chr2.1:26815752-26815771 | None:intergenic | 20.0% |
! | AAAAATATCATCACAGAGAA+AGG | - | chr2.1:26814491-26814510 | None:intergenic | 25.0% |
! | AAACACAGTGATTGAATAAT+TGG | - | chr2.1:26815194-26815213 | None:intergenic | 25.0% |
! | AAAGAATGTACTTGTTTGAT+TGG | - | chr2.1:26816448-26816467 | None:intergenic | 25.0% |
! | AAATTACTTAATTCGAGAGA+TGG | - | chr2.1:26813867-26813886 | None:intergenic | 25.0% |
! | AACCAAAAAAGGAAAGAAAA+GGG | + | chr2.1:26812131-26812150 | MS.gene56623:intron | 25.0% |
! | AAGTACCTAAAATTCAAGAA+AGG | - | chr2.1:26812730-26812749 | None:intergenic | 25.0% |
! | AATCATTAGTCATTGAACAA+AGG | + | chr2.1:26814228-26814247 | MS.gene56623:intron | 25.0% |
! | ACTATACTAAAAACCACATA+AGG | - | chr2.1:26814783-26814802 | None:intergenic | 25.0% |
! | AGAATAATAAGTGGAACAAA+AGG | + | chr2.1:26816539-26816558 | MS.gene56623:intron | 25.0% |
! | ATATAAAGGGTAAAGAGAAA+AGG | + | chr2.1:26812103-26812122 | MS.gene56623:intron | 25.0% |
! | ATCAAATGAAAAGAAAGGAA+AGG | + | chr2.1:26816516-26816535 | MS.gene56623:intron | 25.0% |
! | ATGATGTTGTAAGATATTGT+AGG | - | chr2.1:26816413-26816432 | None:intergenic | 25.0% |
! | GAAAACAATCTAATCAAAGA+AGG | + | chr2.1:26812251-26812270 | MS.gene56623:CDS | 25.0% |
! | GAAAATGTTTGAACTTCATA+TGG | - | chr2.1:26812942-26812961 | None:intergenic | 25.0% |
! | GAATGAATATAATTGAGGTA+AGG | - | chr2.1:26815390-26815409 | None:intergenic | 25.0% |
! | GTAACAATTATATCAAGCAT+AGG | - | chr2.1:26814318-26814337 | None:intergenic | 25.0% |
! | GTCAAAGATAAATAACTGAA+AGG | - | chr2.1:26812905-26812924 | None:intergenic | 25.0% |
! | GTGAAACTAAGAAAAAGATT+GGG | + | chr2.1:26813348-26813367 | MS.gene56623:CDS | 25.0% |
! | TAACCAAAAAAGGAAAGAAA+AGG | + | chr2.1:26812130-26812149 | MS.gene56623:intron | 25.0% |
! | TATAAAGGGTAAAGAGAAAA+GGG | + | chr2.1:26812104-26812123 | MS.gene56623:intron | 25.0% |
! | TATGAGCCAATAAAAATTGA+AGG | + | chr2.1:26817202-26817221 | MS.gene56623:CDS | 25.0% |
! | TATTATGTGAAAGTTGTAGA+TGG | - | chr2.1:26815578-26815597 | None:intergenic | 25.0% |
! | TCGAAATCAAATGAAAAGAA+AGG | + | chr2.1:26816511-26816530 | MS.gene56623:intron | 25.0% |
! | TGATTTCGATGAAAAGAAAT+AGG | - | chr2.1:26816500-26816519 | None:intergenic | 25.0% |
! | TGTGAAACTAAGAAAAAGAT+TGG | + | chr2.1:26813347-26813366 | MS.gene56623:CDS | 25.0% |
! | TTAAAATTAGCAGTATGAGA+TGG | - | chr2.1:26814873-26814892 | None:intergenic | 25.0% |
! | TTTAATAAGGATTCTAGTGA+GGG | - | chr2.1:26814267-26814286 | None:intergenic | 25.0% |
! | TTTATCTTCAGCATTATCAT+CGG | - | chr2.1:26817401-26817420 | None:intergenic | 25.0% |
!! | AATAACAGTTCTTGATGATA+AGG | + | chr2.1:26815341-26815360 | MS.gene56623:CDS | 25.0% |
!! | TATGCTTTGGATTAATTAGT+TGG | + | chr2.1:26811843-26811862 | MS.gene56623:intron | 25.0% |
!! | TGGATCTATAATTTGTAGTT+TGG | + | chr2.1:26812052-26812071 | MS.gene56623:intron | 25.0% |
!! | TGTGAACATCAATGATTTTA+GGG | + | chr2.1:26815254-26815273 | MS.gene56623:CDS | 25.0% |
!!! | ATTTTTTCATTAGACCTTTC+AGG | - | chr2.1:26818036-26818055 | None:intergenic | 25.0% |
!!! | GTTGTGTTTGTTTTAATAGT+TGG | - | chr2.1:26815762-26815781 | None:intergenic | 25.0% |
!!! | GTTTTAATAGTTGGGAATTA+AGG | - | chr2.1:26815753-26815772 | None:intergenic | 25.0% |
!!! | TCAAACCTATTTTTACACAT+GGG | + | chr2.1:26813708-26813727 | MS.gene56623:CDS | 25.0% |
!!! | TGGTTTTTAGTATAGTTCAA+TGG | + | chr2.1:26814787-26814806 | MS.gene56623:intron | 25.0% |
!!! | TTTGTTCTTTTTCTTTGGAA+AGG | + | chr2.1:26812177-26812196 | MS.gene56623:intron | 25.0% |
!!! | TTTGTTTTTTCTATAGGTCT+TGG | + | chr2.1:26813601-26813620 | MS.gene56623:intron | 25.0% |
!!! | TTTTTTCATTAGACCTTTCA+GGG | - | chr2.1:26818035-26818054 | None:intergenic | 25.0% |
AAAAGGGTTGTAACCAAAAA+AGG | + | chr2.1:26812120-26812139 | MS.gene56623:intron | 30.0% | |
AAACATATGGCCTATATGTA+TGG | + | chr2.1:26812791-26812810 | MS.gene56623:CDS | 30.0% | |
AAATAGAATCTGAACTTGAG+TGG | + | chr2.1:26812311-26812330 | MS.gene56623:intron | 30.0% | |
AACATCGAATGAAAACTGTT+AGG | + | chr2.1:26817419-26817438 | MS.gene56623:CDS | 30.0% | |
AAGGAAAGGAGAATAATAAG+TGG | + | chr2.1:26816530-26816549 | MS.gene56623:intron | 30.0% | |
AAGTTGTAGATGGTATAATC+TGG | - | chr2.1:26815568-26815587 | None:intergenic | 30.0% | |
AATATAATTGAGGTAAGGTG+GGG | - | chr2.1:26815385-26815404 | None:intergenic | 30.0% | |
ACAGTGATTGAATAATTGGA+AGG | - | chr2.1:26815190-26815209 | None:intergenic | 30.0% | |
ACATGATAAAGAAGAAATGG+TGG | + | chr2.1:26818071-26818090 | MS.gene56623:CDS | 30.0% | |
ACCTTTGATTACTGATATCA+GGG | + | chr2.1:26813147-26813166 | MS.gene56623:CDS | 30.0% | |
AGAAAACACTTTCTCCAAAA+TGG | + | chr2.1:26814627-26814646 | MS.gene56623:CDS | 30.0% | |
ATAAAGATCTCCAAAACGAT+TGG | - | chr2.1:26815874-26815893 | None:intergenic | 30.0% | |
ATAGAAATAAGAGGGATTGT+AGG | - | chr2.1:26815518-26815537 | None:intergenic | 30.0% | |
ATCATTGTCTTGAGAGTTAT+TGG | + | chr2.1:26812636-26812655 | MS.gene56623:intron | 30.0% | |
ATCTGGAAAATCTCCAAAAT+TGG | + | chr2.1:26817171-26817190 | MS.gene56623:CDS | 30.0% | |
ATCTTATTGTTATAGAGCCT+TGG | + | chr2.1:26814371-26814390 | MS.gene56623:intron | 30.0% | |
ATGTTCTTTCTCGTAAATCA+AGG | + | chr2.1:26817743-26817762 | MS.gene56623:CDS | 30.0% | |
ATGTTGAGGAATCAACATAT+AGG | - | chr2.1:26815465-26815484 | None:intergenic | 30.0% | |
ATTGTGAACCTCATTAACAT+CGG | - | chr2.1:26817923-26817942 | None:intergenic | 30.0% | |
ATTTCTATGATGACATCCTT+GGG | + | chr2.1:26814726-26814745 | MS.gene56623:CDS | 30.0% | |
CACTACAGAAAGTAAAAATG+GGG | + | chr2.1:26815304-26815323 | MS.gene56623:CDS | 30.0% | |
CATGACAAATATCTTTACCT+TGG | - | chr2.1:26814186-26814205 | None:intergenic | 30.0% | |
CATTATTGGATAATATTGCG+AGG | - | chr2.1:26815412-26815431 | None:intergenic | 30.0% | |
CCACTACAGAAAGTAAAAAT+GGG | + | chr2.1:26815303-26815322 | MS.gene56623:CDS | 30.0% | |
CGAACATGATAAAGAAGAAA+TGG | + | chr2.1:26818068-26818087 | MS.gene56623:CDS | 30.0% | |
CGTAAATCAAGGAAATCAAA+AGG | + | chr2.1:26817754-26817773 | MS.gene56623:CDS | 30.0% | |
CTGATCATACACAAAATCAA+AGG | - | chr2.1:26813057-26813076 | None:intergenic | 30.0% | |
CTTCATGATAATAGCAGAAA+AGG | - | chr2.1:26815060-26815079 | None:intergenic | 30.0% | |
GAAACATGATAGTTTCTCAT+TGG | - | chr2.1:26814851-26814870 | None:intergenic | 30.0% | |
GAATATAATTGAGGTAAGGT+GGG | - | chr2.1:26815386-26815405 | None:intergenic | 30.0% | |
GCTAAACTTTACTTAGTAAC+CGG | - | chr2.1:26811931-26811950 | None:intergenic | 30.0% | |
GGAGATCTTTATGTATTAAC+AGG | + | chr2.1:26815882-26815901 | MS.gene56623:intron | 30.0% | |
GTCAATTTCATTCTTGACAA+CGG | - | chr2.1:26816235-26816254 | None:intergenic | 30.0% | |
GTTTAATAAGGATTCTAGTG+AGG | - | chr2.1:26814268-26814287 | None:intergenic | 30.0% | |
TAAACTACCTGTACAATAGT+GGG | + | chr2.1:26814890-26814909 | MS.gene56623:intron | 30.0% | |
TAGTAACCATTTAGATCTGA+TGG | - | chr2.1:26814466-26814485 | None:intergenic | 30.0% | |
TCAAAACACATGAAAAGGAA+GGG | - | chr2.1:26812367-26812386 | None:intergenic | 30.0% | |
TCATTGTCTTGAGAGTTATT+GGG | + | chr2.1:26812637-26812656 | MS.gene56623:intron | 30.0% | |
TCCATTCAAAACACATGAAA+AGG | - | chr2.1:26812372-26812391 | None:intergenic | 30.0% | |
TGAAAGGAACAAAAAGGAAA+AGG | - | chr2.1:26812990-26813009 | None:intergenic | 30.0% | |
TGAATATAATTGAGGTAAGG+TGG | - | chr2.1:26815387-26815406 | None:intergenic | 30.0% | |
TGAGTGTTAAAATGTGTGTT+CGG | - | chr2.1:26815722-26815741 | None:intergenic | 30.0% | |
TGATATCAGTAATCAAAGGT+GGG | - | chr2.1:26813147-26813166 | None:intergenic | 30.0% | |
TGCAAAAATCGAAATTGTTG+AGG | + | chr2.1:26814426-26814445 | MS.gene56623:CDS | 30.0% | |
TGGATTATTGCTTGTCAATA+AGG | + | chr2.1:26812388-26812407 | MS.gene56623:intron | 30.0% | |
TTAAACTACCTGTACAATAG+TGG | + | chr2.1:26814889-26814908 | MS.gene56623:intron | 30.0% | |
TTACAATCCCATGTTATGAT+GGG | - | chr2.1:26814671-26814690 | None:intergenic | 30.0% | |
TTAGAACATGTTTGCATTCA+CGG | - | chr2.1:26812572-26812591 | None:intergenic | 30.0% | |
TTATCTTCAGCATTATCATC+GGG | - | chr2.1:26817400-26817419 | None:intergenic | 30.0% | |
TTCAAAACACATGAAAAGGA+AGG | - | chr2.1:26812368-26812387 | None:intergenic | 30.0% | |
TTCATGAACGTTATGTTACA+AGG | + | chr2.1:26812200-26812219 | MS.gene56623:CDS | 30.0% | |
TTGACAGTCATCTGAAAATA+TGG | - | chr2.1:26813692-26813711 | None:intergenic | 30.0% | |
! | AAATTGACTTAGTACAAGAG+AGG | + | chr2.1:26816247-26816266 | MS.gene56623:intron | 30.0% |
! | AAGAACTAAAGTTGTTTCAC+AGG | + | chr2.1:26817864-26817883 | MS.gene56623:CDS | 30.0% |
! | AATCTGGAAGTGTATAGAAA+AGG | - | chr2.1:26815552-26815571 | None:intergenic | 30.0% |
! | AATTGACTTAGTACAAGAGA+GGG | + | chr2.1:26816248-26816267 | MS.gene56623:intron | 30.0% |
! | ACTTTGAACTTTTCCTTATG+TGG | + | chr2.1:26814767-26814786 | MS.gene56623:intron | 30.0% |
! | AGTTCTTGATGATAAGGAAA+AGG | + | chr2.1:26815347-26815366 | MS.gene56623:CDS | 30.0% |
! | ATCTGGAAGTGTATAGAAAA+GGG | - | chr2.1:26815551-26815570 | None:intergenic | 30.0% |
! | CTGACTTTGTTCTTTTTCTT+TGG | + | chr2.1:26812172-26812191 | MS.gene56623:intron | 30.0% |
! | CTGTGAACATCAATGATTTT+AGG | + | chr2.1:26815253-26815272 | MS.gene56623:CDS | 30.0% |
! | GATGACCTTTCTTGAATTTT+AGG | + | chr2.1:26812722-26812741 | MS.gene56623:intron | 30.0% |
! | GTTAGGAATGAATTTTCTCA+CGG | + | chr2.1:26813299-26813318 | MS.gene56623:CDS | 30.0% |
! | TACCCTTTTCTTTCCTTTTT+TGG | - | chr2.1:26812136-26812155 | None:intergenic | 30.0% |
! | TCATAGTTATCTGCCAATTT+TGG | - | chr2.1:26817187-26817206 | None:intergenic | 30.0% |
! | TTAGGAATGAATTTTCTCAC+GGG | + | chr2.1:26813300-26813319 | MS.gene56623:CDS | 30.0% |
! | TTTTTCATTAGACCTTTCAG+GGG | - | chr2.1:26818034-26818053 | None:intergenic | 30.0% |
! | TTTTTCTATAGGTCTTGGTA+GGG | + | chr2.1:26813606-26813625 | MS.gene56623:intron | 30.0% |
!! | AACATCAATGATTTTAGGGA+CGG | + | chr2.1:26815258-26815277 | MS.gene56623:CDS | 30.0% |
!! | ATTCTTTTGCTGATTAACGT+CGG | + | chr2.1:26813482-26813501 | MS.gene56623:intron | 30.0% |
!! | CAATGCAACAATGTTTTTGA+AGG | - | chr2.1:26815930-26815949 | None:intergenic | 30.0% |
!! | TCCTTTTCATGTGTTTTGAA+TGG | + | chr2.1:26812368-26812387 | MS.gene56623:intron | 30.0% |
!! | TCTTGGCCTTCAATTTTTAT+TGG | - | chr2.1:26817211-26817230 | None:intergenic | 30.0% |
!! | TTTCTGATTCTGAAACAGTT+CGG | + | chr2.1:26812748-26812767 | MS.gene56623:CDS | 30.0% |
!!! | ACTTTAGTTCTTGCATCTTT+TGG | - | chr2.1:26817856-26817875 | None:intergenic | 30.0% |
!!! | ATTAGTTGGTGGTTTTGTAA+AGG | + | chr2.1:26811997-26812016 | MS.gene56623:intron | 30.0% |
!!! | CAGTTAGTTTTGCAAAATCA+CGG | + | chr2.1:26812460-26812479 | MS.gene56623:intron | 30.0% |
!!! | CTTTAGTTCTTGCATCTTTT+GGG | - | chr2.1:26817855-26817874 | None:intergenic | 30.0% |
!!! | GAATCGTTTTGATTTCTCTA+TGG | + | chr2.1:26811652-26811671 | MS.gene56623:CDS | 30.0% |
!!! | GTCAAACCTATTTTTACACA+TGG | + | chr2.1:26813707-26813726 | MS.gene56623:CDS | 30.0% |
!!! | TTTAGTTCTTGCATCTTTTG+GGG | - | chr2.1:26817854-26817873 | None:intergenic | 30.0% |
!!! | TTTTTTCTATAGGTCTTGGT+AGG | + | chr2.1:26813605-26813624 | MS.gene56623:intron | 30.0% |
AAATTTGTATCACCAGACCA+AGG | + | chr2.1:26814166-26814185 | MS.gene56623:CDS | 35.0% | |
AACATCAACAACCAGCATAT+TGG | - | chr2.1:26814143-26814162 | None:intergenic | 35.0% | |
AACCTCATTAACATCGGATT+TGG | - | chr2.1:26817917-26817936 | None:intergenic | 35.0% | |
AACGTTATGTTACAAGGCTA+AGG | + | chr2.1:26812206-26812225 | MS.gene56623:CDS | 35.0% | |
AAGAAATGGTGGCAGATAAA+AGG | + | chr2.1:26818082-26818101 | MS.gene56623:CDS | 35.0% | |
AAGTTCAAAGTTCAGACAGA+CGG | - | chr2.1:26814758-26814777 | None:intergenic | 35.0% | |
AATAACAAAGGAGCAACTTG+TGG | - | chr2.1:26817004-26817023 | None:intergenic | 35.0% | |
ACAGTCATCTGAAAATATGG+AGG | - | chr2.1:26813689-26813708 | None:intergenic | 35.0% | |
ACATCAACAACCAGCATATT+GGG | - | chr2.1:26814142-26814161 | None:intergenic | 35.0% | |
ACCATGCAGTTGAAAACATA+TGG | + | chr2.1:26812778-26812797 | MS.gene56623:CDS | 35.0% | |
ACCCTGATATCAGTAATCAA+AGG | - | chr2.1:26813151-26813170 | None:intergenic | 35.0% | |
ACCTCATTAACATCGGATTT+GGG | - | chr2.1:26817916-26817935 | None:intergenic | 35.0% | |
ACGGGCAAAAATATGATAAG+TGG | + | chr2.1:26815277-26815296 | MS.gene56623:CDS | 35.0% | |
AGAAATGGTGGCAGATAAAA+GGG | + | chr2.1:26818083-26818102 | MS.gene56623:CDS | 35.0% | |
AGGTCAGTAAATGCTTCTAA+AGG | + | chr2.1:26817544-26817563 | MS.gene56623:CDS | 35.0% | |
ATAACTAGAGTGTAACTCGT+GGG | - | chr2.1:26816808-26816827 | None:intergenic | 35.0% | |
ATATAATTGAGGTAAGGTGG+GGG | - | chr2.1:26815384-26815403 | None:intergenic | 35.0% | |
ATGAAGCCATCAGATCTAAA+TGG | + | chr2.1:26814457-26814476 | MS.gene56623:CDS | 35.0% | |
ATGACCTTTCACATAAGGAT+CGG | - | chr2.1:26814573-26814592 | None:intergenic | 35.0% | |
ATGATAATAGCAGAAAAGGC+AGG | - | chr2.1:26815056-26815075 | None:intergenic | 35.0% | |
ATGCAACATTCTTAAGCAGA+AGG | + | chr2.1:26813201-26813220 | MS.gene56623:intron | 35.0% | |
ATGGGATTGTAACAATGTTC+TGG | + | chr2.1:26814679-26814698 | MS.gene56623:CDS | 35.0% | |
ATTGTGAACCACATTCACAT+CGG | - | chr2.1:26817962-26817981 | None:intergenic | 35.0% | |
ATTTGGGAGGATATAGATTC+AGG | + | chr2.1:26814591-26814610 | MS.gene56623:CDS | 35.0% | |
CAAAACACATGAAAAGGAAG+GGG | - | chr2.1:26812366-26812385 | None:intergenic | 35.0% | |
CAAATATCTTTACCTTGGTC+TGG | - | chr2.1:26814181-26814200 | None:intergenic | 35.0% | |
CAAGGATGTCATCATAGAAA+TGG | - | chr2.1:26814727-26814746 | None:intergenic | 35.0% | |
CACCTTTGATTACTGATATC+AGG | + | chr2.1:26813146-26813165 | MS.gene56623:CDS | 35.0% | |
CAGAATTCCCATCATAACAT+GGG | + | chr2.1:26814661-26814680 | MS.gene56623:CDS | 35.0% | |
CATATACAACAAATGAGTCG+AGG | - | chr2.1:26813451-26813470 | None:intergenic | 35.0% | |
CATTGTCTTGAGAGTTATTG+GGG | + | chr2.1:26812638-26812657 | MS.gene56623:intron | 35.0% | |
CATTTCTATGATGACATCCT+TGG | + | chr2.1:26814725-26814744 | MS.gene56623:CDS | 35.0% | |
CCTTATGTGAAAGGTCATTT+GGG | + | chr2.1:26814575-26814594 | MS.gene56623:CDS | 35.0% | |
CGAATGAAAACTGTTAGGAA+AGG | + | chr2.1:26817424-26817443 | MS.gene56623:CDS | 35.0% | |
CGGGCAAAAATATGATAAGT+GGG | + | chr2.1:26815278-26815297 | MS.gene56623:CDS | 35.0% | |
CTAAGAAAAAGATTGGGCTT+TGG | + | chr2.1:26813354-26813373 | MS.gene56623:CDS | 35.0% | |
CTAAGAACCATGGTATGATA+GGG | - | chr2.1:26812845-26812864 | None:intergenic | 35.0% | |
CTGATATCAGTAATCAAAGG+TGG | - | chr2.1:26813148-26813167 | None:intergenic | 35.0% | |
CTTCAATGTCTATTGTCTCT+TGG | - | chr2.1:26817093-26817112 | None:intergenic | 35.0% | |
GAATTAACGCAAGTCTTACT+TGG | - | chr2.1:26816289-26816308 | None:intergenic | 35.0% | |
GAGTACTTATTCTGAGTGAT+TGG | + | chr2.1:26812032-26812051 | MS.gene56623:intron | 35.0% | |
GAGTGTTAAAATGTGTGTTC+GGG | - | chr2.1:26815721-26815740 | None:intergenic | 35.0% | |
GCAATCTGTTCCATACATAT+AGG | - | chr2.1:26812804-26812823 | None:intergenic | 35.0% | |
GCCACTACAGAAAGTAAAAA+TGG | + | chr2.1:26815302-26815321 | MS.gene56623:CDS | 35.0% | |
GCGAGGAATGAATATAATTG+AGG | - | chr2.1:26815395-26815414 | None:intergenic | 35.0% | |
GGAACAAAAAGGAAAAGGAA+TGG | - | chr2.1:26812985-26813004 | None:intergenic | 35.0% | |
GGTCAGTAAATGCTTCTAAA+GGG | + | chr2.1:26817545-26817564 | MS.gene56623:CDS | 35.0% | |
GTCAACAAAGCTGCATATAA+CGG | + | chr2.1:26813380-26813399 | MS.gene56623:CDS | 35.0% | |
GTGAATGCAAACATGTTCTA+AGG | + | chr2.1:26812571-26812590 | MS.gene56623:intron | 35.0% | |
GTTACAATCCCATGTTATGA+TGG | - | chr2.1:26814672-26814691 | None:intergenic | 35.0% | |
TAAGAATGTTGCATACCAAG+TGG | - | chr2.1:26813195-26813214 | None:intergenic | 35.0% | |
TAATAGTTGGGAATTAAGGG+CGG | - | chr2.1:26815749-26815768 | None:intergenic | 35.0% | |
TACAGAAAGTAAAAATGGGG+AGG | + | chr2.1:26815307-26815326 | MS.gene56623:CDS | 35.0% | |
TATAACTAGAGTGTAACTCG+TGG | - | chr2.1:26816809-26816828 | None:intergenic | 35.0% | |
TATAGAGCCTTGGTTTAAAG+TGG | + | chr2.1:26814381-26814400 | MS.gene56623:intron | 35.0% | |
TCAACAAAGCTGCATATAAC+GGG | + | chr2.1:26813381-26813400 | MS.gene56623:CDS | 35.0% | |
TCAAGCCCATGTGTAAAAAT+AGG | - | chr2.1:26813716-26813735 | None:intergenic | 35.0% | |
TCAGAATTCCCATCATAACA+TGG | + | chr2.1:26814660-26814679 | MS.gene56623:CDS | 35.0% | |
TCCTTATGTGAAAGGTCATT+TGG | + | chr2.1:26814574-26814593 | MS.gene56623:CDS | 35.0% | |
TCTAAGAACCATGGTATGAT+AGG | - | chr2.1:26812846-26812865 | None:intergenic | 35.0% | |
TCTGTTCAGCACCTATATTT+GGG | + | chr2.1:26813115-26813134 | MS.gene56623:CDS | 35.0% | |
TGATCTATCTTTATCTGGTG+AGG | + | chr2.1:26811724-26811743 | MS.gene56623:intron | 35.0% | |
TTACAGCCACATATATCGTT+AGG | - | chr2.1:26817337-26817356 | None:intergenic | 35.0% | |
TTCTGTTCAGCACCTATATT+TGG | + | chr2.1:26813114-26813133 | MS.gene56623:CDS | 35.0% | |
TTCTTGACAACGGAATGAAT+TGG | - | chr2.1:26816225-26816244 | None:intergenic | 35.0% | |
! | AAATCGGTTCTGTATTTCGT+AGG | + | chr2.1:26817455-26817474 | MS.gene56623:CDS | 35.0% |
! | CAAACAAAGTGCTAGAGAAA+AGG | - | chr2.1:26815120-26815139 | None:intergenic | 35.0% |
! | CTTTTCTCTAGCACTTTGTT+TGG | + | chr2.1:26815118-26815137 | MS.gene56623:intron | 35.0% |
! | GAGGCACTATTATACTTATG+TGG | - | chr2.1:26815496-26815515 | None:intergenic | 35.0% |
! | GCTTTGGATTAATTAGTTGG+TGG | + | chr2.1:26811846-26811865 | MS.gene56623:intron | 35.0% |
! | GGCTTTGATCTATCTTTATC+TGG | + | chr2.1:26811719-26811738 | MS.gene56623:CDS | 35.0% |
! | GTCAGTAAATGCTTCTAAAG+GGG | + | chr2.1:26817546-26817565 | MS.gene56623:CDS | 35.0% |
! | TCGATTTTTGCATAAGCAAC+AGG | - | chr2.1:26814418-26814437 | None:intergenic | 35.0% |
! | TCTTAGAGAAGTACAAACCT+TGG | + | chr2.1:26812859-26812878 | MS.gene56623:CDS | 35.0% |
! | TGAAAAAGAGCCAATCGTTT+TGG | + | chr2.1:26815861-26815880 | MS.gene56623:intron | 35.0% |
! | TGGAGATTTTCCAGATGAAA+CGG | - | chr2.1:26817167-26817186 | None:intergenic | 35.0% |
! | TGTTAACCCTCCAATTTTGA+TGG | + | chr2.1:26811880-26811899 | MS.gene56623:intron | 35.0% |
! | TTGTACTTCTCTAAGAACCA+TGG | - | chr2.1:26812855-26812874 | None:intergenic | 35.0% |
! | TTTTACTCCCTATCATACCA+TGG | + | chr2.1:26812835-26812854 | MS.gene56623:CDS | 35.0% |
! | TTTTCTATAGGTCTTGGTAG+GGG | + | chr2.1:26813607-26813626 | MS.gene56623:intron | 35.0% |
!! | ACATCAATGATTTTAGGGAC+GGG | + | chr2.1:26815259-26815278 | MS.gene56623:CDS | 35.0% |
!! | CCCATTTTTACTTTCTGTAG+TGG | - | chr2.1:26815306-26815325 | None:intergenic | 35.0% |
!! | TGGCTCTTTTTCATTTTGTG+TGG | - | chr2.1:26815854-26815873 | None:intergenic | 35.0% |
!! | TTGTGACTTTTCGTTGTTTC+AGG | + | chr2.1:26813894-26813913 | MS.gene56623:intron | 35.0% |
!!! | TCACGCTGCTTTTTATTTTG+TGG | + | chr2.1:26811698-26811717 | MS.gene56623:CDS | 35.0% |
AAATTTGCAGCCCAATATGC+TGG | + | chr2.1:26814129-26814148 | MS.gene56623:intron | 40.0% | |
AACCACATTCACATCGGATT+TGG | - | chr2.1:26817956-26817975 | None:intergenic | 40.0% | |
AAGGATTCTAGTGAGGGTTA+TGG | - | chr2.1:26814261-26814280 | None:intergenic | 40.0% | |
ACACGTATACGACCAAGAAA+AGG | - | chr2.1:26813653-26813672 | None:intergenic | 40.0% | |
ACCAATGTTACCTTGAGCAA+TGG | - | chr2.1:26817890-26817909 | None:intergenic | 40.0% | |
ACCACATTCACATCGGATTT+GGG | - | chr2.1:26817955-26817974 | None:intergenic | 40.0% | |
ACTGACCTAATGTTATCACG+TGG | - | chr2.1:26817532-26817551 | None:intergenic | 40.0% | |
ACTGGTAAGATTCAGGTAGA+AGG | + | chr2.1:26817613-26817632 | MS.gene56623:CDS | 40.0% | |
ACTTTCTCCAAAATGGCAAG+AGG | + | chr2.1:26814634-26814653 | MS.gene56623:CDS | 40.0% | |
AGGAATCAACATATAGGCTC+AGG | - | chr2.1:26815459-26815478 | None:intergenic | 40.0% | |
AGGATTCTAGTGAGGGTTAT+GGG | - | chr2.1:26814260-26814279 | None:intergenic | 40.0% | |
AGGGAACCTAACGATATATG+TGG | + | chr2.1:26817328-26817347 | MS.gene56623:CDS | 40.0% | |
ATAACTAGAGTGTAACCCGT+GGG | - | chr2.1:26816939-26816958 | None:intergenic | 40.0% | |
ATGAATCATACAGCAGTCCA+AGG | - | chr2.1:26812879-26812898 | None:intergenic | 40.0% | |
ATGTGGAGTGAACAATGTTG+AGG | - | chr2.1:26815479-26815498 | None:intergenic | 40.0% | |
ATTTCGTAGGAGTCGGAAAA+TGG | + | chr2.1:26817468-26817487 | MS.gene56623:CDS | 40.0% | |
CACTAGATGTCGGTGTAAAA+TGG | + | chr2.1:26814937-26814956 | MS.gene56623:intron | 40.0% | |
CATCTCCACGTGATAACATT+AGG | + | chr2.1:26817524-26817543 | MS.gene56623:CDS | 40.0% | |
CCCAAATGACCTTTCACATA+AGG | - | chr2.1:26814578-26814597 | None:intergenic | 40.0% | |
CCTCATTAACATCGGATTTG+GGG | - | chr2.1:26817915-26817934 | None:intergenic | 40.0% | |
CGGAAAATGGACGATAATTC+AGG | + | chr2.1:26817481-26817500 | MS.gene56623:CDS | 40.0% | |
CTAATGTTATCACGTGGAGA+TGG | - | chr2.1:26817526-26817545 | None:intergenic | 40.0% | |
CTCATTAACATCGGATTTGG+GGG | - | chr2.1:26817914-26817933 | None:intergenic | 40.0% | |
CTTTATCTGGTGAGGATTCA+TGG | + | chr2.1:26811732-26811751 | MS.gene56623:intron | 40.0% | |
GAAATAAGAGGGATTGTAGG+AGG | - | chr2.1:26815515-26815534 | None:intergenic | 40.0% | |
GGCTGTAATTCAACTGTATC+TGG | + | chr2.1:26817349-26817368 | MS.gene56623:CDS | 40.0% | |
GGTTATTGAAGTTCGTGACA+AGG | + | chr2.1:26814700-26814719 | MS.gene56623:CDS | 40.0% | |
GGTTCTTCTGAATTAGTTGG+TGG | + | chr2.1:26811986-26812005 | MS.gene56623:intron | 40.0% | |
GTGGGTTTCTTCCCAAATAT+AGG | - | chr2.1:26813129-26813148 | None:intergenic | 40.0% | |
GTTATGGATGATAACACTGC+TGG | + | chr2.1:26817583-26817602 | MS.gene56623:CDS | 40.0% | |
GTTCTGTATTTCGTAGGAGT+CGG | + | chr2.1:26817461-26817480 | MS.gene56623:CDS | 40.0% | |
GTTTCAATCTTGCATCATGC+TGG | + | chr2.1:26811630-26811649 | MS.gene56623:CDS | 40.0% | |
TAACGGGAATGCATGTTGAA+GGG | + | chr2.1:26813397-26813416 | MS.gene56623:CDS | 40.0% | |
TATAACTAGAGTGTAACCCG+TGG | - | chr2.1:26816940-26816959 | None:intergenic | 40.0% | |
TATGTGAAAGGTCATTTGGG+AGG | + | chr2.1:26814578-26814597 | MS.gene56623:CDS | 40.0% | |
TCAATGCAGGTTCTTGAGTT+AGG | + | chr2.1:26813282-26813301 | MS.gene56623:intron | 40.0% | |
TCGGGTTCTTCTGAATTAGT+TGG | + | chr2.1:26811983-26812002 | MS.gene56623:intron | 40.0% | |
TCGTATACGTGTATGCTTTG+TGG | + | chr2.1:26813661-26813680 | MS.gene56623:CDS | 40.0% | |
TCTACCTGAATCTTACCAGT+CGG | - | chr2.1:26817613-26817632 | None:intergenic | 40.0% | |
TTAGCCGATCCTTATGTGAA+AGG | + | chr2.1:26814566-26814585 | MS.gene56623:CDS | 40.0% | |
TTCTCGTCCACTTTAAACCA+AGG | - | chr2.1:26814391-26814410 | None:intergenic | 40.0% | |
! | ATAACGGGAATGCATGTTGA+AGG | + | chr2.1:26813396-26813415 | MS.gene56623:CDS | 40.0% |
! | GCCATATGTTTTCAACTGCA+TGG | - | chr2.1:26812782-26812801 | None:intergenic | 40.0% |
! | GTAAATGCTTCTAAAGGGGT+TGG | + | chr2.1:26817550-26817569 | MS.gene56623:CDS | 40.0% |
! | TGAAGTCCGCACATTTTTGT+AGG | - | chr2.1:26816082-26816101 | None:intergenic | 40.0% |
! | TTGGTTTAAAGTGGACGAGA+AGG | + | chr2.1:26814390-26814409 | MS.gene56623:CDS | 40.0% |
! | TTTTACGCTGTGATCAATGC+AGG | + | chr2.1:26813269-26813288 | MS.gene56623:intron | 40.0% |
! | TTTTCTTGGCTCCCACATTT+GGG | - | chr2.1:26817275-26817294 | None:intergenic | 40.0% |
!! | AACCCTCCAATTTTGATGGA+GGG | + | chr2.1:26811884-26811903 | MS.gene56623:intron | 40.0% |
!! | ATACAGAACCGATTTTGTGC+AGG | - | chr2.1:26817450-26817469 | None:intergenic | 40.0% |
!! | CTGAATTCCTCTTGCCATTT+TGG | - | chr2.1:26814644-26814663 | None:intergenic | 40.0% |
!! | TAACCCTCCAATTTTGATGG+AGG | + | chr2.1:26811883-26811902 | MS.gene56623:intron | 40.0% |
AAAGAGAGACGTCAAGGACA+TGG | + | chr2.1:26817672-26817691 | MS.gene56623:CDS | 45.0% | |
AACCAATGTCACTCTCTTGC+AGG | + | chr2.1:26815223-26815242 | MS.gene56623:intron | 45.0% | |
AAGAACCCGAGTTCGATCTT+TGG | - | chr2.1:26811973-26811992 | None:intergenic | 45.0% | |
AAGCGAAGTTCCCCAAATGT+GGG | + | chr2.1:26817261-26817280 | MS.gene56623:CDS | 45.0% | |
AAGGGTCTGTTCAAACGCAA+TGG | - | chr2.1:26813932-26813951 | None:intergenic | 45.0% | |
ACAGAACTTCCAGGAATTGC+TGG | + | chr2.1:26813740-26813759 | MS.gene56623:CDS | 45.0% | |
ACCAATGTCACTCTCTTGCA+GGG | + | chr2.1:26815224-26815243 | MS.gene56623:intron | 45.0% | |
ACCCCTCCATCAAAATTGGA+GGG | - | chr2.1:26811889-26811908 | None:intergenic | 45.0% | |
ACTGCTGCTGTCATTGTTCA+AGG | - | chr2.1:26817377-26817396 | None:intergenic | 45.0% | |
AGACTTCACTCACCTCAACA+AGG | - | chr2.1:26813951-26813970 | None:intergenic | 45.0% | |
AGGAAAGGCCTGCACAAAAT+CGG | + | chr2.1:26817439-26817458 | MS.gene56623:CDS | 45.0% | |
ATGCATGTTGAAGGGAAGGT+AGG | + | chr2.1:26813405-26813424 | MS.gene56623:intron | 45.0% | |
ATTGAAGGCCAAGAGAAGAC+AGG | + | chr2.1:26817217-26817236 | MS.gene56623:CDS | 45.0% | |
CAAATGTGGGAGCCAAGAAA+AGG | + | chr2.1:26817274-26817293 | MS.gene56623:CDS | 45.0% | |
CAAGAAAAGGCCATTCCTTG+AGG | - | chr2.1:26813640-26813659 | None:intergenic | 45.0% | |
CACATCACCCACTATTGTAC+AGG | - | chr2.1:26814900-26814919 | None:intergenic | 45.0% | |
CACATTCACATCGGATTTGG+GGG | - | chr2.1:26817953-26817972 | None:intergenic | 45.0% | |
CCACATTCACATCGGATTTG+GGG | - | chr2.1:26817954-26817973 | None:intergenic | 45.0% | |
CCCCAAATCCGATGTTAATG+AGG | + | chr2.1:26817912-26817931 | MS.gene56623:CDS | 45.0% | |
CCTCGACACAGAAATTCAGA+GGG | + | chr2.1:26817309-26817328 | MS.gene56623:CDS | 45.0% | |
CTTGATGTGACAGAACTTCC+AGG | + | chr2.1:26813731-26813750 | MS.gene56623:CDS | 45.0% | |
CTTTCCGACTGGTAAGATTC+AGG | + | chr2.1:26817606-26817625 | MS.gene56623:CDS | 45.0% | |
GACTTCACTCACCTCAACAA+GGG | - | chr2.1:26813950-26813969 | None:intergenic | 45.0% | |
GCAAATGAGACCACCAACAA+AGG | + | chr2.1:26817130-26817149 | MS.gene56623:CDS | 45.0% | |
GCCATTGCTCAAGGTAACAT+TGG | + | chr2.1:26817886-26817905 | MS.gene56623:CDS | 45.0% | |
GGATGAGAAGGAACCTTTGT+TGG | - | chr2.1:26817146-26817165 | None:intergenic | 45.0% | |
GGATTCTAGTGAGGGTTATG+GGG | - | chr2.1:26814259-26814278 | None:intergenic | 45.0% | |
GGCAAGCCTACAAAAATGTG+CGG | + | chr2.1:26816073-26816092 | MS.gene56623:intron | 45.0% | |
GGTAAGATTCAGGTAGAAGG+TGG | + | chr2.1:26817616-26817635 | MS.gene56623:CDS | 45.0% | |
GTTTGAACAGACCCTTGTTG+AGG | + | chr2.1:26813936-26813955 | MS.gene56623:CDS | 45.0% | |
TAATTCAGGTCCTATTGCGC+AGG | + | chr2.1:26817495-26817514 | MS.gene56623:CDS | 45.0% | |
TAGAAGGTGGATCAACGGAA+GGG | + | chr2.1:26817629-26817648 | MS.gene56623:CDS | 45.0% | |
TCAGGTAGAAGGTGGATCAA+CGG | + | chr2.1:26817624-26817643 | MS.gene56623:CDS | 45.0% | |
TCCAAACACCTGTCTTCTCT+TGG | - | chr2.1:26817228-26817247 | None:intergenic | 45.0% | |
TCCAGATGAAACGGATGAGA+AGG | - | chr2.1:26817158-26817177 | None:intergenic | 45.0% | |
TCCTTCTCATCCGTTTCATC+TGG | + | chr2.1:26817154-26817173 | MS.gene56623:CDS | 45.0% | |
TGAGAAGGAACCTTTGTTGG+TGG | - | chr2.1:26817143-26817162 | None:intergenic | 45.0% | |
TTCCGTCCAAAGATCGAACT+CGG | + | chr2.1:26811964-26811983 | MS.gene56623:intron | 45.0% | |
TTGAAGGGAAGGTAGGATTG+CGG | + | chr2.1:26813412-26813431 | MS.gene56623:intron | 45.0% | |
TTTCTTGGCTCCCACATTTG+GGG | - | chr2.1:26817274-26817293 | None:intergenic | 45.0% | |
! | AGCAGTGAGCTCTGCAATTT+TGG | - | chr2.1:26812527-26812546 | None:intergenic | 45.0% |
! | CTCAAGGAATGGCCTTTTCT+TGG | + | chr2.1:26813638-26813657 | MS.gene56623:CDS | 45.0% |
! | CTCACTGCTCACTGTGATTT+TGG | + | chr2.1:26812538-26812557 | MS.gene56623:intron | 45.0% |
! | CTTAGTACAAGAGAGGGCAT+TGG | + | chr2.1:26816254-26816273 | MS.gene56623:intron | 45.0% |
! | CTTTTCTTGGCTCCCACATT+TGG | - | chr2.1:26817276-26817295 | None:intergenic | 45.0% |
!! | AAAAGGCATTCTCCCCTGAA+AGG | + | chr2.1:26818019-26818038 | MS.gene56623:CDS | 45.0% |
!! | ACCCTCCAATTTTGATGGAG+GGG | + | chr2.1:26811885-26811904 | MS.gene56623:intron | 45.0% |
!! | CTGATTCTGAAACAGTTCGG+TGG | + | chr2.1:26812751-26812770 | MS.gene56623:CDS | 45.0% |
!! | CTGTACAATAGTGGGTGATG+TGG | + | chr2.1:26814898-26814917 | MS.gene56623:intron | 45.0% |
!! | GGTTGGCGTGAAGTTTGTTA+TGG | + | chr2.1:26817567-26817586 | MS.gene56623:CDS | 45.0% |
!!! | CGTCGATTCTTGCCTTTTCT+TGG | - | chr2.1:26817289-26817308 | None:intergenic | 45.0% |
!!! | GTTATAATATTTTTTATTTT+TGG | - | chr2.1:26815671-26815690 | None:intergenic | 5.0% |
AACTTCCAGGAATTGCTGGC+TGG | + | chr2.1:26813744-26813763 | MS.gene56623:CDS | 50.0% | |
ACCCGAGTTCGATCTTTGGA+CGG | - | chr2.1:26811969-26811988 | None:intergenic | 50.0% | |
AGACAGACGGAACTAACCCA+AGG | - | chr2.1:26814745-26814764 | None:intergenic | 50.0% | |
ATTTGGGGAACTTCGCTTCC+TGG | - | chr2.1:26817259-26817278 | None:intergenic | 50.0% | |
CAACACCACTGTGGTCAACA+AGG | + | chr2.1:26817990-26818009 | MS.gene56623:CDS | 50.0% | |
CCAAGTGGTCATCATCACAC+TGG | - | chr2.1:26813180-26813199 | None:intergenic | 50.0% | |
CCAGACCCCTCCATCAAAAT+TGG | - | chr2.1:26811893-26811912 | None:intergenic | 50.0% | |
CCCCAAATCCGATGTGAATG+TGG | + | chr2.1:26817951-26817970 | MS.gene56623:CDS | 50.0% | |
CCCTCTGAATTTCTGTGTCG+AGG | - | chr2.1:26817312-26817331 | None:intergenic | 50.0% | |
CTTAGTAACCGGCTGAACTC+CGG | - | chr2.1:26811920-26811939 | None:intergenic | 50.0% | |
CTTGAGAGTTATTGGGGCTG+TGG | + | chr2.1:26812644-26812663 | MS.gene56623:intron | 50.0% | |
CTTGTTGACCACAGTGGTGT+TGG | - | chr2.1:26817992-26818011 | None:intergenic | 50.0% | |
GAAGCGAAGTTCCCCAAATG+TGG | + | chr2.1:26817260-26817279 | MS.gene56623:CDS | 50.0% | |
GACCCCTCCATCAAAATTGG+AGG | - | chr2.1:26811890-26811909 | None:intergenic | 50.0% | |
GATGGAAAGTCCTGCGCAAT+AGG | - | chr2.1:26817508-26817527 | None:intergenic | 50.0% | |
GCCAAGAGAAGACAGGTGTT+TGG | + | chr2.1:26817224-26817243 | MS.gene56623:CDS | 50.0% | |
GCCTCGACACAGAAATTCAG+AGG | + | chr2.1:26817308-26817327 | MS.gene56623:CDS | 50.0% | |
GGGAATGCATGTTGAAGGGA+AGG | + | chr2.1:26813401-26813420 | MS.gene56623:CDS | 50.0% | |
GGGTGAAGTTCCTCAAGGAA+TGG | + | chr2.1:26813627-26813646 | MS.gene56623:CDS | 50.0% | |
GGTCAACAAGGAGCCTCAAA+AGG | + | chr2.1:26818002-26818021 | MS.gene56623:CDS | 50.0% | |
GGTGTTTGGATACATCAGCC+AGG | + | chr2.1:26817238-26817257 | MS.gene56623:CDS | 50.0% | |
GTAGAAGGTGGATCAACGGA+AGG | + | chr2.1:26817628-26817647 | MS.gene56623:CDS | 50.0% | |
GTTTCACAGGCCATTGCTCA+AGG | + | chr2.1:26817877-26817896 | MS.gene56623:CDS | 50.0% | |
TAATTGAGGTAAGGTGGGGG+AGG | - | chr2.1:26815381-26815400 | None:intergenic | 50.0% | |
TCCCTGCAAGAGAGTGACAT+TGG | - | chr2.1:26815228-26815247 | None:intergenic | 50.0% | |
TCCGTCCAAAGATCGAACTC+GGG | + | chr2.1:26811965-26811984 | MS.gene56623:intron | 50.0% | |
TCCTTGACGTCTCTCTTTGC+CGG | - | chr2.1:26817670-26817689 | None:intergenic | 50.0% | |
! | CCAGTGTGATGATGACCACT+TGG | + | chr2.1:26813177-26813196 | MS.gene56623:CDS | 50.0% |
! | TCAGGGGAGAATGCCTTTTG+AGG | - | chr2.1:26818018-26818037 | None:intergenic | 50.0% |
! | TTGACCACAGTGGTGTTGGA+TGG | - | chr2.1:26817988-26818007 | None:intergenic | 50.0% |
!! | CCAATTTTGATGGAGGGGTC+TGG | + | chr2.1:26811890-26811909 | MS.gene56623:intron | 50.0% |
!! | GGCTGGCTTGTAAGTGTACA+TGG | + | chr2.1:26813761-26813780 | MS.gene56623:intron | 50.0% |
ACAAGCCAGCCAGCAATTCC+TGG | - | chr2.1:26813752-26813771 | None:intergenic | 55.0% | |
AGGCTCCTTGTTGACCACAG+TGG | - | chr2.1:26817998-26818017 | None:intergenic | 55.0% | |
AGGGAGTAGTCCTGATAGCC+CGG | + | chr2.1:26817648-26817667 | MS.gene56623:CDS | 55.0% | |
ATCAACACACGCGCAACCCA+CGG | + | chr2.1:26816920-26816939 | MS.gene56623:intron | 55.0% | |
CCTTGACGTCTCTCTTTGCC+GGG | - | chr2.1:26817669-26817688 | None:intergenic | 55.0% | |
CTGGTAATCCGGAGTTCAGC+CGG | + | chr2.1:26811909-26811928 | MS.gene56623:intron | 55.0% | |
GATGGAGGGGTCTGGTAATC+CGG | + | chr2.1:26811898-26811917 | MS.gene56623:intron | 55.0% | |
GGTAGGGGTGAAGTTCCTCA+AGG | + | chr2.1:26813622-26813641 | MS.gene56623:CDS | 55.0% | |
TCTCTCTTTGCCGGGCTATC+AGG | - | chr2.1:26817661-26817680 | None:intergenic | 55.0% | |
TGTGCCATCCAACACCACTG+TGG | + | chr2.1:26817981-26818000 | MS.gene56623:CDS | 55.0% | |
!! | AACACTGCTGGCTTTCCGAC+TGG | + | chr2.1:26817595-26817614 | MS.gene56623:CDS | 55.0% |
CCCGGCAAAGAGAGACGTCA+AGG | + | chr2.1:26817666-26817685 | MS.gene56623:CDS | 60.0% | |
GAGCAACTTGTGGCGCTACG+TGG | - | chr2.1:26816994-26817013 | None:intergenic | 60.0% | |
TCAACACACGCGCAACCCAC+GGG | + | chr2.1:26816921-26816940 | MS.gene56623:intron | 60.0% | |
TGAGGTAAGGTGGGGGAGGA+GGG | - | chr2.1:26815377-26815396 | None:intergenic | 60.0% | |
TTGAGGTAAGGTGGGGGAGG+AGG | - | chr2.1:26815378-26815397 | None:intergenic | 60.0% | |
GAGGTAAGGTGGGGGAGGAG+GGG | - | chr2.1:26815376-26815395 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.1 | gene | 26811615 | 26818128 | 26811615 | ID=MS.gene56623 |
chr2.1 | mRNA | 26811615 | 26818128 | 26811615 | ID=MS.gene56623.t1;Parent=MS.gene56623 |
chr2.1 | exon | 26811615 | 26811740 | 26811615 | ID=MS.gene56623.t1.exon1;Parent=MS.gene56623.t1 |
chr2.1 | CDS | 26811615 | 26811740 | 26811615 | ID=cds.MS.gene56623.t1;Parent=MS.gene56623.t1 |
chr2.1 | exon | 26812199 | 26812273 | 26812199 | ID=MS.gene56623.t1.exon2;Parent=MS.gene56623.t1 |
chr2.1 | CDS | 26812199 | 26812273 | 26812199 | ID=cds.MS.gene56623.t1;Parent=MS.gene56623.t1 |
chr2.1 | exon | 26812744 | 26812887 | 26812744 | ID=MS.gene56623.t1.exon3;Parent=MS.gene56623.t1 |
chr2.1 | CDS | 26812744 | 26812887 | 26812744 | ID=cds.MS.gene56623.t1;Parent=MS.gene56623.t1 |
chr2.1 | exon | 26813106 | 26813198 | 26813106 | ID=MS.gene56623.t1.exon4;Parent=MS.gene56623.t1 |
chr2.1 | CDS | 26813106 | 26813198 | 26813106 | ID=cds.MS.gene56623.t1;Parent=MS.gene56623.t1 |
chr2.1 | exon | 26813291 | 26813422 | 26813291 | ID=MS.gene56623.t1.exon5;Parent=MS.gene56623.t1 |
chr2.1 | CDS | 26813291 | 26813422 | 26813291 | ID=cds.MS.gene56623.t1;Parent=MS.gene56623.t1 |
chr2.1 | exon | 26813617 | 26813769 | 26813617 | ID=MS.gene56623.t1.exon6;Parent=MS.gene56623.t1 |
chr2.1 | CDS | 26813617 | 26813769 | 26813617 | ID=cds.MS.gene56623.t1;Parent=MS.gene56623.t1 |
chr2.1 | exon | 26813916 | 26813957 | 26813916 | ID=MS.gene56623.t1.exon7;Parent=MS.gene56623.t1 |
chr2.1 | CDS | 26813916 | 26813957 | 26813916 | ID=cds.MS.gene56623.t1;Parent=MS.gene56623.t1 |
chr2.1 | exon | 26814139 | 26814187 | 26814139 | ID=MS.gene56623.t1.exon8;Parent=MS.gene56623.t1 |
chr2.1 | CDS | 26814139 | 26814187 | 26814139 | ID=cds.MS.gene56623.t1;Parent=MS.gene56623.t1 |
chr2.1 | exon | 26814386 | 26814478 | 26814386 | ID=MS.gene56623.t1.exon9;Parent=MS.gene56623.t1 |
chr2.1 | CDS | 26814386 | 26814478 | 26814386 | ID=cds.MS.gene56623.t1;Parent=MS.gene56623.t1 |
chr2.1 | exon | 26814564 | 26814747 | 26814564 | ID=MS.gene56623.t1.exon10;Parent=MS.gene56623.t1 |
chr2.1 | CDS | 26814564 | 26814747 | 26814564 | ID=cds.MS.gene56623.t1;Parent=MS.gene56623.t1 |
chr2.1 | exon | 26815245 | 26815368 | 26815245 | ID=MS.gene56623.t1.exon11;Parent=MS.gene56623.t1 |
chr2.1 | CDS | 26815245 | 26815368 | 26815245 | ID=cds.MS.gene56623.t1;Parent=MS.gene56623.t1 |
chr2.1 | exon | 26817070 | 26818128 | 26817070 | ID=MS.gene56623.t1.exon12;Parent=MS.gene56623.t1 |
chr2.1 | CDS | 26817070 | 26818128 | 26817070 | ID=cds.MS.gene56623.t1;Parent=MS.gene56623.t1 |
Gene Sequence |
Protein sequence |