Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57292.t1 | XP_013446814.1 | 94.4 | 359 | 17 | 2 | 1 | 359 | 1 | 356 | 3.10E-189 | 671 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57292.t1 | A8KBE0 | 39.2 | 171 | 100 | 3 | 167 | 336 | 702 | 869 | 1.4e-25 | 118.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57292.t1 | A0A072TUK2 | 94.4 | 359 | 17 | 2 | 1 | 359 | 1 | 356 | 2.2e-189 | 671.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049254 | MS.gene57292 | 0.801954 | 7.06E-49 | -1.69E-46 |
| MS.gene049499 | MS.gene57292 | 0.800069 | 1.71E-48 | -1.69E-46 |
| MS.gene052493 | MS.gene57292 | 0.805492 | 1.30E-49 | -1.69E-46 |
| MS.gene054222 | MS.gene57292 | 0.802642 | 5.09E-49 | -1.69E-46 |
| MS.gene05423 | MS.gene57292 | 0.80497 | 1.67E-49 | -1.69E-46 |
| MS.gene054892 | MS.gene57292 | 0.804491 | 2.11E-49 | -1.69E-46 |
| MS.gene054893 | MS.gene57292 | 0.801109 | 1.05E-48 | -1.69E-46 |
| MS.gene055229 | MS.gene57292 | 0.831366 | 1.74E-55 | -1.69E-46 |
| MS.gene056677 | MS.gene57292 | 0.8098 | 1.58E-50 | -1.69E-46 |
| MS.gene056699 | MS.gene57292 | 0.804389 | 2.21E-49 | -1.69E-46 |
| MS.gene057102 | MS.gene57292 | 0.800511 | 1.39E-48 | -1.69E-46 |
| MS.gene057155 | MS.gene57292 | 0.820388 | 7.04E-53 | -1.69E-46 |
| MS.gene057208 | MS.gene57292 | 0.804866 | 1.76E-49 | -1.69E-46 |
| MS.gene05952 | MS.gene57292 | 0.819549 | 1.10E-52 | -1.69E-46 |
| MS.gene05985 | MS.gene57292 | -0.824966 | 6.06E-54 | -1.69E-46 |
| MS.gene060257 | MS.gene57292 | 0.802416 | 5.67E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57292.t1 | MTR_8g090235 | 94.429 | 359 | 17 | 2 | 1 | 359 | 1 | 356 | 0.0 | 658 |
| MS.gene57292.t1 | MTR_8g090235 | 93.994 | 333 | 17 | 2 | 1 | 333 | 1 | 330 | 0.0 | 601 |
| MS.gene57292.t1 | MTR_3g087230 | 58.442 | 385 | 121 | 12 | 1 | 359 | 1 | 372 | 6.73e-138 | 397 |
| MS.gene57292.t1 | MTR_3g087230 | 58.442 | 385 | 120 | 12 | 1 | 359 | 1 | 371 | 3.61e-137 | 395 |
| MS.gene57292.t1 | MTR_3g087230 | 55.455 | 330 | 107 | 12 | 1 | 304 | 1 | 316 | 4.10e-103 | 306 |
| MS.gene57292.t1 | MTR_3g087230 | 52.475 | 303 | 105 | 13 | 1 | 277 | 1 | 290 | 7.41e-82 | 251 |
| MS.gene57292.t1 | MTR_3g087230 | 52.475 | 303 | 104 | 13 | 1 | 277 | 1 | 289 | 3.46e-81 | 249 |
| MS.gene57292.t1 | MTR_3g087230 | 49.324 | 296 | 107 | 14 | 1 | 270 | 1 | 279 | 2.64e-67 | 214 |
| MS.gene57292.t1 | MTR_3g087230 | 49.324 | 296 | 106 | 14 | 1 | 270 | 1 | 278 | 9.13e-67 | 212 |
| MS.gene57292.t1 | MTR_1g073340 | 56.395 | 172 | 75 | 0 | 166 | 337 | 137 | 308 | 3.22e-62 | 201 |
| MS.gene57292.t1 | MTR_1g044690 | 54.335 | 173 | 79 | 0 | 168 | 340 | 122 | 294 | 3.19e-54 | 180 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57292.t1 | AT4G39870 | 48.762 | 404 | 151 | 8 | 1 | 359 | 1 | 393 | 6.18e-119 | 350 |
| MS.gene57292.t1 | AT4G39870 | 48.762 | 404 | 151 | 8 | 1 | 359 | 1 | 393 | 6.18e-119 | 350 |
| MS.gene57292.t1 | AT2G05590 | 54.444 | 180 | 82 | 0 | 163 | 342 | 122 | 301 | 3.38e-68 | 217 |
| MS.gene57292.t1 | AT2G05590 | 54.225 | 142 | 65 | 0 | 163 | 304 | 122 | 263 | 7.83e-52 | 173 |
| MS.gene57292.t1 | AT5G06260 | 29.114 | 158 | 99 | 5 | 197 | 344 | 174 | 328 | 1.11e-13 | 72.0 |
| MS.gene57292.t1 | AT5G06260 | 29.114 | 158 | 99 | 5 | 197 | 344 | 238 | 392 | 1.24e-13 | 72.0 |
| MS.gene57292.t1 | AT5G06260 | 29.114 | 158 | 99 | 5 | 197 | 344 | 149 | 303 | 1.61e-13 | 71.2 |
Find 95 sgRNAs with CRISPR-Local
Find 250 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTTCCTTCACTTGAAATTC+TGG | 0.230950 | 4.1:-10255857 | None:intergenic |
| GGTTTGTTATGGTCAGAAAT+AGG | 0.233665 | 4.1:-10252747 | None:intergenic |
| GGTAGATGATGATGAGTTAA+AGG | 0.279770 | 4.1:+10252901 | MS.gene57292:CDS |
| AGTTCGGTTTCCGAAACTTA+TGG | 0.320071 | 4.1:+10255812 | MS.gene57292:CDS |
| TATCACTTTCAACTCTTTAC+CGG | 0.326685 | 4.1:+10253510 | MS.gene57292:CDS |
| GCACTTCCGGCTTTAATTCA+TGG | 0.329830 | 4.1:+10253337 | MS.gene57292:CDS |
| CAACCAATTTCTCATTCATT+TGG | 0.340463 | 4.1:-10253063 | None:intergenic |
| TCAAGAAGGGATTGTTATCT+AGG | 0.341466 | 4.1:+10253086 | MS.gene57292:CDS |
| GTTTGTTATGGTCAGAAATA+GGG | 0.345242 | 4.1:-10252746 | None:intergenic |
| TGCGGTTTATGATGCACTTC+CGG | 0.349970 | 4.1:+10253324 | MS.gene57292:CDS |
| TTGGCCTGGACCTAGTTTGC+TGG | 0.351025 | 4.1:+10253544 | MS.gene57292:CDS |
| TGATCATTTGCCGGAAATAT+CGG | 0.357645 | 4.1:+10253267 | MS.gene57292:CDS |
| CAAAGCAGTTCACCTTGTTT+CGG | 0.358183 | 4.1:+10252701 | MS.gene57292:CDS |
| ACAAGGATTGCCATAAGTTT+CGG | 0.368495 | 4.1:-10255822 | None:intergenic |
| TGACCAAATGAATGAGAAAT+TGG | 0.373689 | 4.1:+10253060 | MS.gene57292:CDS |
| ATTGAAGGTTCCGATATTTC+CGG | 0.382091 | 4.1:-10253277 | None:intergenic |
| CATATCAACTCAAGATTGAA+TGG | 0.382180 | 4.1:+10255785 | MS.gene57292:intron |
| CTTTAATTCATGGGAAGAAC+TGG | 0.407743 | 4.1:+10253347 | MS.gene57292:CDS |
| AGGAGCAGTGTTTGGTGGCT+TGG | 0.413328 | 4.1:+10254396 | MS.gene57292:CDS |
| TTTGGTTGTTGATCATTTGC+CGG | 0.432855 | 4.1:+10253258 | MS.gene57292:CDS |
| GACCGAAAAGGAGCAGTGTT+TGG | 0.438263 | 4.1:+10254388 | MS.gene57292:CDS |
| CTTTGCAGCACATGGAAACA+TGG | 0.442796 | 4.1:+10253485 | MS.gene57292:intron |
| GCAGTAAACGACGACGTATC+AGG | 0.445057 | 4.1:-10252947 | None:intergenic |
| ACCACTGACTTTCTAGCGAT+TGG | 0.446127 | 4.1:+10255619 | MS.gene57292:CDS |
| TTCTCTTGTTGGATGGTCGA+AGG | 0.447351 | 4.1:-10254429 | None:intergenic |
| TGTTGATTTCGAATAGTTTG+AGG | 0.450543 | 4.1:+10253299 | MS.gene57292:CDS |
| AAGATTGAATGGGTCAAGTT+CGG | 0.451165 | 4.1:+10255796 | MS.gene57292:intron |
| TGAGAAATTGGTTGTCAAGA+AGG | 0.453693 | 4.1:+10253072 | MS.gene57292:CDS |
| TTTACCGGAGAAGTATGCTT+TGG | 0.460274 | 4.1:+10253525 | MS.gene57292:CDS |
| CAGGTTGTTGGAGACCGAAA+AGG | 0.462680 | 4.1:+10254376 | MS.gene57292:intron |
| AATTATTGTTTAGGAAGAAA+AGG | 0.466326 | 4.1:+10252880 | MS.gene57292:intron |
| TGAAATTGTACCAGCAAACT+AGG | 0.469728 | 4.1:-10253554 | None:intergenic |
| CGGAGAAGTATGCTTTGGCC+TGG | 0.471135 | 4.1:+10253530 | MS.gene57292:CDS |
| CACTTCCGGCTTTAATTCAT+GGG | 0.478819 | 4.1:+10253338 | MS.gene57292:CDS |
| AGAGGTACCTAGTGTGCCTT+TGG | 0.478962 | 4.1:+10253240 | MS.gene57292:CDS |
| CCTGTCGTATATCGCCCAAC+AGG | 0.479602 | 4.1:+10254603 | MS.gene57292:CDS |
| GATAAGATTGTGACTGCAGC+TGG | 0.481152 | 4.1:+10253028 | MS.gene57292:CDS |
| CAAGAAGGGATTGTTATCTA+GGG | 0.481467 | 4.1:+10253087 | MS.gene57292:CDS |
| TCTCTTGTTGGATGGTCGAA+GGG | 0.489291 | 4.1:-10254428 | None:intergenic |
| ACTGACTTTCTAGCGATTGG+TGG | 0.489834 | 4.1:+10255622 | MS.gene57292:CDS |
| AGGGATAAATTTGAGTCTGA+TGG | 0.490332 | 4.1:+10253178 | MS.gene57292:CDS |
| CTATTCGAAATCAACATTGA+AGG | 0.490666 | 4.1:-10253292 | None:intergenic |
| GAGAAATTGGTTGTCAAGAA+GGG | 0.491672 | 4.1:+10253073 | MS.gene57292:CDS |
| TCCCTTTCGCCATCTTGTGT+TGG | 0.498135 | 4.1:-10253160 | None:intergenic |
| GACTTTCTAGCGATTGGTGG+GGG | 0.501174 | 4.1:+10255625 | MS.gene57292:CDS |
| ATTTATCTATCTGCTAGAAC+GGG | 0.507739 | 4.1:+10253130 | MS.gene57292:CDS |
| GAGGACGAGAGGGTTTGTTA+TGG | 0.508533 | 4.1:-10252758 | None:intergenic |
| TTCTCCAGAATTTCAAGTGA+AGG | 0.510211 | 4.1:+10255853 | MS.gene57292:CDS |
| TATTTATCTATCTGCTAGAA+CGG | 0.513283 | 4.1:+10253129 | MS.gene57292:CDS |
| TTGAGCAAAACAGAGGCACC+TGG | 0.517709 | 4.1:+10256088 | MS.gene57292:CDS |
| CTTTCCTCCATGCAGTTGTG+GGG | 0.519234 | 4.1:+10256028 | MS.gene57292:intron |
| AGAACTGGTTAATGATGTAC+AGG | 0.519562 | 4.1:+10253362 | MS.gene57292:CDS |
| AGGCACCTGGGATCTCTCGC+TGG | 0.521785 | 4.1:+10256101 | MS.gene57292:CDS |
| TTCTTCCCATGAATTAAAGC+CGG | 0.530383 | 4.1:-10253343 | None:intergenic |
| CTGACTTTCTAGCGATTGGT+GGG | 0.531876 | 4.1:+10255623 | MS.gene57292:CDS |
| TCATTCATTTGGTCATCACC+AGG | 0.532498 | 4.1:-10253052 | None:intergenic |
| GGGATAAATTTGAGTCTGAT+GGG | 0.537744 | 4.1:+10253179 | MS.gene57292:CDS |
| CGAAAAGGAGCAGTGTTTGG+TGG | 0.540629 | 4.1:+10254391 | MS.gene57292:CDS |
| AATTGAGAACTTACTATGGA+AGG | 0.547869 | 4.1:-10252780 | None:intergenic |
| ATATCAACTCAAGATTGAAT+GGG | 0.549497 | 4.1:+10255786 | MS.gene57292:intron |
| TGTATTTCCTTCAAAACATG+AGG | 0.552112 | 4.1:+10256054 | MS.gene57292:CDS |
| CAGGCCAAAGCATACTTCTC+CGG | 0.555164 | 4.1:-10253529 | None:intergenic |
| GAAAGTGAATCAGAGATTGA+AGG | 0.560111 | 4.1:+10252923 | MS.gene57292:CDS |
| CTCTTGTTGGATGGTCGAAG+GGG | 0.562431 | 4.1:-10254427 | None:intergenic |
| ATTGTGACTGCAGCTGGACC+TGG | 0.567414 | 4.1:+10253034 | MS.gene57292:CDS |
| TTCCAACACAAGATGGCGAA+AGG | 0.567792 | 4.1:+10253158 | MS.gene57292:CDS |
| TGTACCAGCAAACTAGGTCC+AGG | 0.570453 | 4.1:-10253548 | None:intergenic |
| TCAACAACCAAAGGCACACT+AGG | 0.571234 | 4.1:-10253247 | None:intergenic |
| TCCAACACAAGATGGCGAAA+GGG | 0.576200 | 4.1:+10253159 | MS.gene57292:CDS |
| GGTGGATTTCCAACACAAGA+TGG | 0.577445 | 4.1:+10253151 | MS.gene57292:CDS |
| TTTGCAGCACATGGAAACAT+GGG | 0.579278 | 4.1:+10253486 | MS.gene57292:intron |
| ATTTCAAGTGAAGGAAGTAG+AGG | 0.579766 | 4.1:+10255862 | MS.gene57292:CDS |
| TTCGAATAGTTTGAGGAATG+CGG | 0.583662 | 4.1:+10253306 | MS.gene57292:CDS |
| TATCTATCTGCTAGAACGGG+TGG | 0.584754 | 4.1:+10253133 | MS.gene57292:CDS |
| ATCCAACAAGAGAAAATACC+AGG | 0.596747 | 4.1:+10254438 | MS.gene57292:CDS |
| CAGTGGTGAGATCCGAAACA+AGG | 0.598925 | 4.1:-10252713 | None:intergenic |
| TGGTGCAAAGTGTGAAGTAA+CGG | 0.599281 | 4.1:-10255600 | None:intergenic |
| ATTTACCAGCGAGAGATCCC+AGG | 0.600370 | 4.1:-10256106 | None:intergenic |
| TGACTTTCTAGCGATTGGTG+GGG | 0.600382 | 4.1:+10255624 | MS.gene57292:CDS |
| CCTGTTGGGCGATATACGAC+AGG | 0.602267 | 4.1:-10254603 | None:intergenic |
| AAATTTGAGTCTGATGGGTG+TGG | 0.614316 | 4.1:+10253184 | MS.gene57292:CDS |
| GGCAAATGATCAACAACCAA+AGG | 0.615389 | 4.1:-10253256 | None:intergenic |
| TGAGTCTGATGGGTGTGGTG+TGG | 0.621546 | 4.1:+10253189 | MS.gene57292:CDS |
| TGAGCAAAACAGAGGCACCT+GGG | 0.621947 | 4.1:+10256089 | MS.gene57292:CDS |
| TCTGGAGAATGTGCTAAACA+AGG | 0.634055 | 4.1:-10255839 | None:intergenic |
| ACTATGGAAGGAGGACGAGA+GGG | 0.634975 | 4.1:-10252768 | None:intergenic |
| TACTATGGAAGGAGGACGAG+AGG | 0.638442 | 4.1:-10252769 | None:intergenic |
| ACTAAAATTGAGCAAAACAG+AGG | 0.638548 | 4.1:+10256081 | MS.gene57292:CDS |
| ACCAATCGCTAGAAAGTCAG+TGG | 0.645879 | 4.1:-10255620 | None:intergenic |
| AAGAAGGGATTGTTATCTAG+GGG | 0.664052 | 4.1:+10253088 | MS.gene57292:CDS |
| TGAGAACTTACTATGGAAGG+AGG | 0.668946 | 4.1:-10252777 | None:intergenic |
| CTAGGTACCTCTTTCAACGG+CGG | 0.669452 | 4.1:-10253229 | None:intergenic |
| AATAGGGTTGAGAAGAACAG+TGG | 0.691115 | 4.1:-10252730 | None:intergenic |
| ACACTAGGTACCTCTTTCAA+CGG | 0.691173 | 4.1:-10253232 | None:intergenic |
| ATTATCTCTAGAATCCGACG+AGG | 0.791211 | 4.1:-10252993 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGTATATTAAATTATTGTTT+AGG | + | chr4.1:10252871-10252890 | MS.gene57292:intron | 10.0% |
| !!! | TTTTAATTTTAAATGAAGTA+TGG | + | chr4.1:10255283-10255302 | MS.gene57292:intron | 10.0% |
| !! | AATTGCAACAAAAAAAAATT+AGG | - | chr4.1:10255759-10255778 | None:intergenic | 15.0% |
| !! | ACTGTAATTTATTGAATATA+TGG | + | chr4.1:10253848-10253867 | MS.gene57292:intron | 15.0% |
| !! | GATGATATTATAATTATAGA+GGG | - | chr4.1:10255734-10255753 | None:intergenic | 15.0% |
| !! | TGATGATATTATAATTATAG+AGG | - | chr4.1:10255735-10255754 | None:intergenic | 15.0% |
| !! | TGTATTACTAAATCAATAAT+AGG | + | chr4.1:10254744-10254763 | MS.gene57292:intron | 15.0% |
| !!! | ATTTAATTGATAATCTTATG+TGG | + | chr4.1:10253459-10253478 | MS.gene57292:intron | 15.0% |
| !!! | TTTTTTTTTGTTGCAATTTT+TGG | + | chr4.1:10255761-10255780 | MS.gene57292:intron | 15.0% |
| !! | AAAATTAACATTGTTGCAAA+GGG | - | chr4.1:10254503-10254522 | None:intergenic | 20.0% |
| !! | AAATAGCTAACAATACATTA+AGG | - | chr4.1:10254351-10254370 | None:intergenic | 20.0% |
| !! | AATTATTGTTTAGGAAGAAA+AGG | + | chr4.1:10252880-10252899 | MS.gene57292:intron | 20.0% |
| !! | ATATTATAATTATAGAGGGA+AGG | - | chr4.1:10255730-10255749 | None:intergenic | 20.0% |
| !! | ATTATAGAAAGAAAAAGTCT+GGG | + | chr4.1:10255500-10255519 | MS.gene57292:intron | 20.0% |
| !! | TAAAATTAACATTGTTGCAA+AGG | - | chr4.1:10254504-10254523 | None:intergenic | 20.0% |
| !!! | AATTATCAGTTTTAATGACA+TGG | + | chr4.1:10254873-10254892 | MS.gene57292:intron | 20.0% |
| !!! | TTTTGTATTAAGGTTTTTGA+AGG | + | chr4.1:10253388-10253407 | MS.gene57292:intron | 20.0% |
| !!! | TTTTTCTTTCTATAATCATG+TGG | - | chr4.1:10255496-10255515 | None:intergenic | 20.0% |
| ! | AAAAAAAGAGATATACCTGT+TGG | - | chr4.1:10254621-10254640 | None:intergenic | 25.0% |
| ! | AAAAAAGAGATATACCTGTT+GGG | - | chr4.1:10254620-10254639 | None:intergenic | 25.0% |
| ! | AAAGTAAGAAAGAACAAACA+TGG | - | chr4.1:10253622-10253641 | None:intergenic | 25.0% |
| ! | AAATGTTTCGTACATCAATA+AGG | - | chr4.1:10255981-10256000 | None:intergenic | 25.0% |
| ! | AATGGAACAAAAATATGTGT+AGG | - | chr4.1:10253902-10253921 | None:intergenic | 25.0% |
| ! | ATATCAACTCAAGATTGAAT+GGG | + | chr4.1:10255786-10255805 | MS.gene57292:intron | 25.0% |
| ! | ATCTATAGCTCAATTCTAAA+TGG | - | chr4.1:10253920-10253939 | None:intergenic | 25.0% |
| ! | ATCTTAATGTACTGTTAGAA+AGG | + | chr4.1:10255218-10255237 | MS.gene57292:intron | 25.0% |
| ! | CAACATGGTCTATTATTAAA+TGG | - | chr4.1:10253991-10254010 | None:intergenic | 25.0% |
| ! | CATTTAATAATAGACCATGT+TGG | + | chr4.1:10253989-10254008 | MS.gene57292:intron | 25.0% |
| ! | GATTATAGAAAGAAAAAGTC+TGG | + | chr4.1:10255499-10255518 | MS.gene57292:intron | 25.0% |
| ! | TATTTATCTATCTGCTAGAA+CGG | + | chr4.1:10253129-10253148 | MS.gene57292:CDS | 25.0% |
| ! | TGCAATTAAAGCTATAATCT+AGG | - | chr4.1:10252808-10252827 | None:intergenic | 25.0% |
| ! | TTCTCTTTGCAGATTAAAAT+TGG | - | chr4.1:10254266-10254285 | None:intergenic | 25.0% |
| ! | TTGTAATTAATAGTAGCACA+CGG | + | chr4.1:10254171-10254190 | MS.gene57292:intron | 25.0% |
| !! | AATATTGCATCATCTTTTTG+TGG | - | chr4.1:10255350-10255369 | None:intergenic | 25.0% |
| !! | AGACAATTTGATAATCTCTA+GGG | + | chr4.1:10253645-10253664 | MS.gene57292:intron | 25.0% |
| !! | ATATTGCATCATCTTTTTGT+GGG | - | chr4.1:10255349-10255368 | None:intergenic | 25.0% |
| !! | CTAGATATAATTTTACCTCA+AGG | + | chr4.1:10255188-10255207 | MS.gene57292:intron | 25.0% |
| !! | GTTGACATAAATTTTGTACA+GGG | + | chr4.1:10254540-10254559 | MS.gene57292:intron | 25.0% |
| !! | TAGACAATTTGATAATCTCT+AGG | + | chr4.1:10253644-10253663 | MS.gene57292:intron | 25.0% |
| !! | TGTTGACATAAATTTTGTAC+AGG | + | chr4.1:10254539-10254558 | MS.gene57292:intron | 25.0% |
| !! | TTTCCTTTTACAAAACTATG+TGG | + | chr4.1:10254809-10254828 | MS.gene57292:intron | 25.0% |
| !! | TTTTCAAACCCAAAAAATGA+GGG | - | chr4.1:10255021-10255040 | None:intergenic | 25.0% |
| !!! | ATTGTTAGCTATTTTTTTCC+AGG | + | chr4.1:10254357-10254376 | MS.gene57292:intron | 25.0% |
| !!! | CTTTTGTTGTCATAGTTATA+CGG | + | chr4.1:10254673-10254692 | MS.gene57292:intron | 25.0% |
| !!! | GTGATTTGTTTGATGAAAAA+AGG | - | chr4.1:10255704-10255723 | None:intergenic | 25.0% |
| !!! | TTTTTCAAACCCAAAAAATG+AGG | - | chr4.1:10255022-10255041 | None:intergenic | 25.0% |
| AATTGAGAACTTACTATGGA+AGG | - | chr4.1:10252783-10252802 | None:intergenic | 30.0% | |
| ACTAAAATTGAGCAAAACAG+AGG | + | chr4.1:10256081-10256100 | MS.gene57292:CDS | 30.0% | |
| ATTTATCTATCTGCTAGAAC+GGG | + | chr4.1:10253130-10253149 | MS.gene57292:CDS | 30.0% | |
| CAACCAATTTCTCATTCATT+TGG | - | chr4.1:10253066-10253085 | None:intergenic | 30.0% | |
| CAATGTGATGAACATGAAAT+GGG | - | chr4.1:10254042-10254061 | None:intergenic | 30.0% | |
| CATATCAACTCAAGATTGAA+TGG | + | chr4.1:10255785-10255804 | MS.gene57292:intron | 30.0% | |
| CCACATATTATTGTTATGCA+AGG | + | chr4.1:10253950-10253969 | MS.gene57292:intron | 30.0% | |
| CCTTGCATAACAATAATATG+TGG | - | chr4.1:10253953-10253972 | None:intergenic | 30.0% | |
| CTATTCGAAATCAACATTGA+AGG | - | chr4.1:10253295-10253314 | None:intergenic | 30.0% | |
| GCAAATTGCAATATATCCTT+TGG | - | chr4.1:10255096-10255115 | None:intergenic | 30.0% | |
| GGTTAATTGAGAACTTACTA+TGG | - | chr4.1:10252787-10252806 | None:intergenic | 30.0% | |
| TAAATCACTGTAAACCAACA+TGG | - | chr4.1:10254006-10254025 | None:intergenic | 30.0% | |
| TACAAAAATAAAACCAGACC+TGG | - | chr4.1:10254459-10254478 | None:intergenic | 30.0% | |
| TATATTGCAATTTGCCATTG+AGG | + | chr4.1:10255101-10255120 | MS.gene57292:intron | 30.0% | |
| TATCACTTTCAACTCTTTAC+CGG | + | chr4.1:10253510-10253529 | MS.gene57292:CDS | 30.0% | |
| TCAATGTGATGAACATGAAA+TGG | - | chr4.1:10254043-10254062 | None:intergenic | 30.0% | |
| TGAATTAACCACAATATTGC+AGG | + | chr4.1:10255571-10255590 | MS.gene57292:intron | 30.0% | |
| TGACCAAATGAATGAGAAAT+TGG | + | chr4.1:10253060-10253079 | MS.gene57292:CDS | 30.0% | |
| TGTATTTCCTTCAAAACATG+AGG | + | chr4.1:10256054-10256073 | MS.gene57292:CDS | 30.0% | |
| TTATTTAAATACCCGACATG+AGG | + | chr4.1:10253739-10253758 | MS.gene57292:intron | 30.0% | |
| TTTACAAAACTATGTGGATG+AGG | + | chr4.1:10254815-10254834 | MS.gene57292:intron | 30.0% | |
| ! | AACATGATGCTTTTGTAACT+TGG | + | chr4.1:10254963-10254982 | MS.gene57292:intron | 30.0% |
| ! | ACAAGCTAAGAAACAACTTT+TGG | + | chr4.1:10253807-10253826 | MS.gene57292:intron | 30.0% |
| ! | CAAGCTAAGAAACAACTTTT+GGG | + | chr4.1:10253808-10253827 | MS.gene57292:intron | 30.0% |
| ! | TTTGGGTTTGAAAAATCAGA+AGG | + | chr4.1:10255027-10255046 | MS.gene57292:intron | 30.0% |
| !! | ATTAAGATGAATTAGCCTTG+AGG | - | chr4.1:10255206-10255225 | None:intergenic | 30.0% |
| !! | GTTTGTTATGGTCAGAAATA+GGG | - | chr4.1:10252749-10252768 | None:intergenic | 30.0% |
| !! | TGTTGATTTCGAATAGTTTG+AGG | + | chr4.1:10253299-10253318 | MS.gene57292:CDS | 30.0% |
| !! | TTTGTTTTCACAAACATCTC+TGG | + | chr4.1:10254576-10254595 | MS.gene57292:CDS | 30.0% |
| !!! | CATCCACATAGTTTTGTAAA+AGG | - | chr4.1:10254815-10254834 | None:intergenic | 30.0% |
| !!! | GTACAGGTAGTTTTGTATTA+AGG | + | chr4.1:10253378-10253397 | MS.gene57292:intron | 30.0% |
| !!! | TAAGAAACAACTTTTGGGTT+TGG | + | chr4.1:10253813-10253832 | MS.gene57292:intron | 30.0% |
| AACAGATTGATAAAAAGGGG+GGG | - | chr4.1:10255939-10255958 | None:intergenic | 35.0% | |
| AACCAATAAGCTTGCAAACA+TGG | - | chr4.1:10254224-10254243 | None:intergenic | 35.0% | |
| AAGAAGGGATTGTTATCTAG+GGG | + | chr4.1:10253088-10253107 | MS.gene57292:CDS | 35.0% | |
| AAGATTGAATGGGTCAAGTT+CGG | + | chr4.1:10255796-10255815 | MS.gene57292:intron | 35.0% | |
| ACAAGGATTGCCATAAGTTT+CGG | - | chr4.1:10255825-10255844 | None:intergenic | 35.0% | |
| ACAATATGCCATCAACAAGA+GGG | - | chr4.1:10254121-10254140 | None:intergenic | 35.0% | |
| ACCAATAAGCTTGCAAACAT+GGG | - | chr4.1:10254223-10254242 | None:intergenic | 35.0% | |
| ACTGACATATGATTTCTGTC+TGG | + | chr4.1:10253873-10253892 | MS.gene57292:intron | 35.0% | |
| ACTTCCTTCACTTGAAATTC+TGG | - | chr4.1:10255860-10255879 | None:intergenic | 35.0% | |
| AGAACTGGTTAATGATGTAC+AGG | + | chr4.1:10253362-10253381 | MS.gene57292:CDS | 35.0% | |
| AGGGATAAATTTGAGTCTGA+TGG | + | chr4.1:10253178-10253197 | MS.gene57292:CDS | 35.0% | |
| ATAAGCTTAATTGTGCTGGA+GGG | - | chr4.1:10253583-10253602 | None:intergenic | 35.0% | |
| ATCCAACAAGAGAAAATACC+AGG | + | chr4.1:10254438-10254457 | MS.gene57292:CDS | 35.0% | |
| ATGAAATATGCACCTCATGT+CGG | - | chr4.1:10253754-10253773 | None:intergenic | 35.0% | |
| ATTGAAGGTTCCGATATTTC+CGG | - | chr4.1:10253280-10253299 | None:intergenic | 35.0% | |
| CAACATAAGCTTAATTGTGC+TGG | - | chr4.1:10253587-10253606 | None:intergenic | 35.0% | |
| CAAGAAGGGATTGTTATCTA+GGG | + | chr4.1:10253087-10253106 | MS.gene57292:CDS | 35.0% | |
| CATGACAATCCACAAATGTA+GGG | - | chr4.1:10255055-10255074 | None:intergenic | 35.0% | |
| CCGGAACAGATTGATAAAAA+GGG | - | chr4.1:10255943-10255962 | None:intergenic | 35.0% | |
| CGGAACAGATTGATAAAAAG+GGG | - | chr4.1:10255942-10255961 | None:intergenic | 35.0% | |
| CTGACATATGATTTCTGTCT+GGG | + | chr4.1:10253874-10253893 | MS.gene57292:intron | 35.0% | |
| CTTTAATTCATGGGAAGAAC+TGG | + | chr4.1:10253347-10253366 | MS.gene57292:CDS | 35.0% | |
| GAAAGTGAATCAGAGATTGA+AGG | + | chr4.1:10252923-10252942 | MS.gene57292:CDS | 35.0% | |
| GAACAGATTGATAAAAAGGG+GGG | - | chr4.1:10255940-10255959 | None:intergenic | 35.0% | |
| GAGAAATTGGTTGTCAAGAA+GGG | + | chr4.1:10253073-10253092 | MS.gene57292:CDS | 35.0% | |
| GATTGATAAATTGAGCTGCA+CGG | + | chr4.1:10253676-10253695 | MS.gene57292:intron | 35.0% | |
| GGAACAGATTGATAAAAAGG+GGG | - | chr4.1:10255941-10255960 | None:intergenic | 35.0% | |
| GGGATAAATTTGAGTCTGAT+GGG | + | chr4.1:10253179-10253198 | MS.gene57292:CDS | 35.0% | |
| TACAATATGCCATCAACAAG+AGG | - | chr4.1:10254122-10254141 | None:intergenic | 35.0% | |
| TAGAAAGAAAAAGTCTGGGT+TGG | + | chr4.1:10255504-10255523 | MS.gene57292:intron | 35.0% | |
| TCAAGAAGGGATTGTTATCT+AGG | + | chr4.1:10253086-10253105 | MS.gene57292:CDS | 35.0% | |
| TCATGACAATCCACAAATGT+AGG | - | chr4.1:10255056-10255075 | None:intergenic | 35.0% | |
| TGAAATTGTACCAGCAAACT+AGG | - | chr4.1:10253557-10253576 | None:intergenic | 35.0% | |
| TGAGAAATTGGTTGTCAAGA+AGG | + | chr4.1:10253072-10253091 | MS.gene57292:CDS | 35.0% | |
| TGATCATTTGCCGGAAATAT+CGG | + | chr4.1:10253267-10253286 | MS.gene57292:CDS | 35.0% | |
| TGGGGAAAAAGCAATCTTTA+CGG | + | chr4.1:10252676-10252695 | MS.gene57292:CDS | 35.0% | |
| TGTTTCGTACATCAATAAGG+AGG | - | chr4.1:10255978-10255997 | None:intergenic | 35.0% | |
| TTCGAATAGTTTGAGGAATG+CGG | + | chr4.1:10253306-10253325 | MS.gene57292:CDS | 35.0% | |
| TTCTTCCCATGAATTAAAGC+CGG | - | chr4.1:10253346-10253365 | None:intergenic | 35.0% | |
| TTGAAACCATTAAAGATGCC+AGG | - | chr4.1:10255252-10255271 | None:intergenic | 35.0% | |
| TTTGGTTGTTGATCATTTGC+CGG | + | chr4.1:10253258-10253277 | MS.gene57292:CDS | 35.0% | |
| ! | AACTCAGTCTTGCTGATTAA+AGG | - | chr4.1:10254303-10254322 | None:intergenic | 35.0% |
| ! | ATCACATTGATGACTTCGTA+TGG | + | chr4.1:10254053-10254072 | MS.gene57292:intron | 35.0% |
| ! | ATTTCAAGTGAAGGAAGTAG+AGG | + | chr4.1:10255862-10255881 | MS.gene57292:CDS | 35.0% |
| ! | CCCTTTTTATCAATCTGTTC+CGG | + | chr4.1:10255940-10255959 | MS.gene57292:intron | 35.0% |
| ! | GGTAGATGATGATGAGTTAA+AGG | + | chr4.1:10252901-10252920 | MS.gene57292:CDS | 35.0% |
| ! | TGCTTTTGTAACTTGGAATC+TGG | + | chr4.1:10254970-10254989 | MS.gene57292:intron | 35.0% |
| ! | TGGTATTTTCTCTTGTTGGA+TGG | - | chr4.1:10254439-10254458 | None:intergenic | 35.0% |
| ! | TTCTCCAGAATTTCAAGTGA+AGG | + | chr4.1:10255853-10255872 | MS.gene57292:CDS | 35.0% |
| ! | TTTTTGTGGGCAACTTCAAT+AGG | - | chr4.1:10255336-10255355 | None:intergenic | 35.0% |
| !! | AAGAGGGGTATTTCAAAAGT+TGG | - | chr4.1:10254105-10254124 | None:intergenic | 35.0% |
| !! | AGAGGGGTATTTCAAAAGTT+GGG | - | chr4.1:10254104-10254123 | None:intergenic | 35.0% |
| !! | AGGTCATTTTGCGCTTTATT+TGG | + | chr4.1:10255648-10255667 | MS.gene57292:CDS | 35.0% |
| !! | AGTATCTCCTCATGTTTTGA+AGG | - | chr4.1:10256064-10256083 | None:intergenic | 35.0% |
| !! | GGTTTGTTATGGTCAGAAAT+AGG | - | chr4.1:10252750-10252769 | None:intergenic | 35.0% |
| !! | GTCTCTAAAGTCAACAGAAA+GGG | - | chr4.1:10255139-10255158 | None:intergenic | 35.0% |
| !! | TGTCTCTAAAGTCAACAGAA+AGG | - | chr4.1:10255140-10255159 | None:intergenic | 35.0% |
| !!! | CATTTTGCGCTTTATTTGGA+GGG | + | chr4.1:10255652-10255671 | MS.gene57292:CDS | 35.0% |
| !!! | GCTATTTTTTTCCAGGTTGT+TGG | + | chr4.1:10254364-10254383 | MS.gene57292:intron | 35.0% |
| !!! | TCATTTTGCGCTTTATTTGG+AGG | + | chr4.1:10255651-10255670 | MS.gene57292:CDS | 35.0% |
| AAGGAGGTAAACAAATGAGC+CGG | - | chr4.1:10255962-10255981 | None:intergenic | 40.0% | |
| AATAGGGTTGAGAAGAACAG+TGG | - | chr4.1:10252733-10252752 | None:intergenic | 40.0% | |
| ACAAGAGAAAATACCAGGTC+TGG | + | chr4.1:10254443-10254462 | MS.gene57292:intron | 40.0% | |
| ACACTAGGTACCTCTTTCAA+CGG | - | chr4.1:10253235-10253254 | None:intergenic | 40.0% | |
| AGTTCGGTTTCCGAAACTTA+TGG | + | chr4.1:10255812-10255831 | MS.gene57292:CDS | 40.0% | |
| ATATATCCTTTGGCAAGACG+TGG | - | chr4.1:10255086-10255105 | None:intergenic | 40.0% | |
| CAATATGCCATCAACAAGAG+GGG | - | chr4.1:10254120-10254139 | None:intergenic | 40.0% | |
| CATAAGCTTAATTGTGCTGG+AGG | - | chr4.1:10253584-10253603 | None:intergenic | 40.0% | |
| GAGTTTCCTGGCATCTTTAA+TGG | + | chr4.1:10255243-10255262 | MS.gene57292:intron | 40.0% | |
| GATGACTTCGTATGGATGAA+TGG | + | chr4.1:10254061-10254080 | MS.gene57292:intron | 40.0% | |
| GCCGGAACAGATTGATAAAA+AGG | - | chr4.1:10255944-10255963 | None:intergenic | 40.0% | |
| GGAAATCAAGCTTTCCTCAA+TGG | - | chr4.1:10255118-10255137 | None:intergenic | 40.0% | |
| GGCAAATGATCAACAACCAA+AGG | - | chr4.1:10253259-10253278 | None:intergenic | 40.0% | |
| GGTTAATAAGCTCATGCTGT+TGG | + | chr4.1:10254240-10254259 | MS.gene57292:intron | 40.0% | |
| GGTTTACTCCTGCAATATTG+TGG | - | chr4.1:10255582-10255601 | None:intergenic | 40.0% | |
| GTTAGAAAGGATGAGTTTCC+TGG | + | chr4.1:10255231-10255250 | MS.gene57292:intron | 40.0% | |
| GTTCTACACTCTACATTCAG+TGG | + | chr4.1:10254320-10254339 | MS.gene57292:intron | 40.0% | |
| TAATGACATGGTATCCCACA+CGG | + | chr4.1:10254885-10254904 | MS.gene57292:intron | 40.0% | |
| TACACTCTACATTCAGTGGT+TGG | + | chr4.1:10254324-10254343 | MS.gene57292:intron | 40.0% | |
| TAGTAGCACACGGAGTTTAA+CGG | + | chr4.1:10254181-10254200 | MS.gene57292:intron | 40.0% | |
| TCATTCATTTGGTCATCACC+AGG | - | chr4.1:10253055-10253074 | None:intergenic | 40.0% | |
| TCCCATGTTTGCAAGCTTAT+TGG | + | chr4.1:10254219-10254238 | MS.gene57292:intron | 40.0% | |
| TCTGGAGAATGTGCTAAACA+AGG | - | chr4.1:10255842-10255861 | None:intergenic | 40.0% | |
| TGAAATACCCCTCTTGTTGA+TGG | + | chr4.1:10254110-10254129 | MS.gene57292:intron | 40.0% | |
| TGAAATATGCACCTCATGTC+GGG | - | chr4.1:10253753-10253772 | None:intergenic | 40.0% | |
| TGAGAACTTACTATGGAAGG+AGG | - | chr4.1:10252780-10252799 | None:intergenic | 40.0% | |
| TGGTGCAAAGTGTGAAGTAA+CGG | - | chr4.1:10255603-10255622 | None:intergenic | 40.0% | |
| TTGATAAAAAGGGGGGGAAA+AGG | - | chr4.1:10255933-10255952 | None:intergenic | 40.0% | |
| TTTGCAGCACATGGAAACAT+GGG | + | chr4.1:10253486-10253505 | MS.gene57292:intron | 40.0% | |
| ! | AAATTTGAGTCTGATGGGTG+TGG | + | chr4.1:10253184-10253203 | MS.gene57292:CDS | 40.0% |
| ! | CAAAGCAGTTCACCTTGTTT+CGG | + | chr4.1:10252701-10252720 | MS.gene57292:CDS | 40.0% |
| ! | CACTTCCGGCTTTAATTCAT+GGG | + | chr4.1:10253338-10253357 | MS.gene57292:CDS | 40.0% |
| ! | GACCTGGTATTTTCTCTTGT+TGG | - | chr4.1:10254443-10254462 | None:intergenic | 40.0% |
| ! | TTTACCGGAGAAGTATGCTT+TGG | + | chr4.1:10253525-10253544 | MS.gene57292:CDS | 40.0% |
| !! | AGAAAAAGTCTGGGTTGGTT+TGG | + | chr4.1:10255509-10255528 | MS.gene57292:intron | 40.0% |
| !! | ATTATCTCTAGAATCCGACG+AGG | - | chr4.1:10252996-10253015 | None:intergenic | 40.0% |
| !! | TTCATTTTTGTCGTCCTCGT+CGG | + | chr4.1:10252979-10252998 | MS.gene57292:CDS | 40.0% |
| !!! | GAAACAACTTTTGGGTTTGG+TGG | + | chr4.1:10253816-10253835 | MS.gene57292:intron | 40.0% |
| AAAAAGGGGGGGAAAAGGTT+GGG | - | chr4.1:10255928-10255947 | None:intergenic | 45.0% | |
| AACCCAAAAAATGAGGGCGA+CGG | - | chr4.1:10255015-10255034 | None:intergenic | 45.0% | |
| AATGACATGGTATCCCACAC+GGG | + | chr4.1:10254886-10254905 | MS.gene57292:intron | 45.0% | |
| ACCAATCGCTAGAAAGTCAG+TGG | - | chr4.1:10255623-10255642 | None:intergenic | 45.0% | |
| AGTAGCACACGGAGTTTAAC+GGG | + | chr4.1:10254182-10254201 | MS.gene57292:intron | 45.0% | |
| ATTGTACCACGTCTTGCCAA+AGG | + | chr4.1:10255077-10255096 | MS.gene57292:intron | 45.0% | |
| CTGCACGGTAGATTAGAGAT+AGG | + | chr4.1:10253691-10253710 | MS.gene57292:intron | 45.0% | |
| CTTTGCAGCACATGGAAACA+TGG | + | chr4.1:10253485-10253504 | MS.gene57292:intron | 45.0% | |
| GATAAGATTGTGACTGCAGC+TGG | + | chr4.1:10253028-10253047 | MS.gene57292:CDS | 45.0% | |
| GTTCATGTGTCTGTGAGTGA+GGG | - | chr4.1:10255902-10255921 | None:intergenic | 45.0% | |
| TAAAAAGGGGGGGAAAAGGT+TGG | - | chr4.1:10255929-10255948 | None:intergenic | 45.0% | |
| TATCTATCTGCTAGAACGGG+TGG | + | chr4.1:10253133-10253152 | MS.gene57292:CDS | 45.0% | |
| TCCAACACAAGATGGCGAAA+GGG | + | chr4.1:10253159-10253178 | MS.gene57292:CDS | 45.0% | |
| TCTCTTGTTGGATGGTCGAA+GGG | - | chr4.1:10254431-10254450 | None:intergenic | 45.0% | |
| TCTTTCCTCCATGCAGTTGT+GGG | + | chr4.1:10256027-10256046 | MS.gene57292:intron | 45.0% | |
| TGCGGTTTATGATGCACTTC+CGG | + | chr4.1:10253324-10253343 | MS.gene57292:CDS | 45.0% | |
| TGTGGTTTCTTTGCAGCACA+TGG | + | chr4.1:10253477-10253496 | MS.gene57292:intron | 45.0% | |
| TTCCAACACAAGATGGCGAA+AGG | + | chr4.1:10253158-10253177 | MS.gene57292:CDS | 45.0% | |
| TTCTCTTGTTGGATGGTCGA+AGG | - | chr4.1:10254432-10254451 | None:intergenic | 45.0% | |
| ! | ACTGACTTTCTAGCGATTGG+TGG | + | chr4.1:10255622-10255641 | MS.gene57292:CDS | 45.0% |
| ! | CACCAAACACTGCTCCTTTT+CGG | - | chr4.1:10254393-10254412 | None:intergenic | 45.0% |
| ! | CTGACTTTCTAGCGATTGGT+GGG | + | chr4.1:10255623-10255642 | MS.gene57292:CDS | 45.0% |
| ! | GCACTTCCGGCTTTAATTCA+TGG | + | chr4.1:10253337-10253356 | MS.gene57292:CDS | 45.0% |
| ! | GGTGGATTTCCAACACAAGA+TGG | + | chr4.1:10253151-10253170 | MS.gene57292:CDS | 45.0% |
| ! | TCAACAACCAAAGGCACACT+AGG | - | chr4.1:10253250-10253269 | None:intergenic | 45.0% |
| ! | TGACTTTCTAGCGATTGGTG+GGG | + | chr4.1:10255624-10255643 | MS.gene57292:CDS | 45.0% |
| ! | TTTTCAACCGCCGTTGAAAG+AGG | + | chr4.1:10253222-10253241 | MS.gene57292:CDS | 45.0% |
| !! | ACCACTGACTTTCTAGCGAT+TGG | + | chr4.1:10255619-10255638 | MS.gene57292:CDS | 45.0% |
| !! | TATCTCTGAGATTCAGCACG+AGG | + | chr4.1:10255394-10255413 | MS.gene57292:intron | 45.0% |
| !!! | ACAACTTTTGGGTTTGGTGG+TGG | + | chr4.1:10253819-10253838 | MS.gene57292:intron | 45.0% |
| !!! | CAACTTTTGGGTTTGGTGGT+GGG | + | chr4.1:10253820-10253839 | MS.gene57292:intron | 45.0% |
| AAAAAATGAGGGCGACGGGT+GGG | - | chr4.1:10255010-10255029 | None:intergenic | 50.0% | |
| AAAAGGGGGGGAAAAGGTTG+GGG | - | chr4.1:10255927-10255946 | None:intergenic | 50.0% | |
| AACATGGGACTTCAACACGC+AGG | - | chr4.1:10254208-10254227 | None:intergenic | 50.0% | |
| ACCCAAAAAATGAGGGCGAC+GGG | - | chr4.1:10255014-10255033 | None:intergenic | 50.0% | |
| ACTATGGAAGGAGGACGAGA+GGG | - | chr4.1:10252771-10252790 | None:intergenic | 50.0% | |
| CAGAAGGCTCCCTACATTTG+TGG | + | chr4.1:10255043-10255062 | MS.gene57292:intron | 50.0% | |
| CAGGCCAAAGCATACTTCTC+CGG | - | chr4.1:10253532-10253551 | None:intergenic | 50.0% | |
| CAGGTTGTTGGAGACCGAAA+AGG | + | chr4.1:10254376-10254395 | MS.gene57292:intron | 50.0% | |
| CAGTGGTGAGATCCGAAACA+AGG | - | chr4.1:10252716-10252735 | None:intergenic | 50.0% | |
| CGAAAAGGAGCAGTGTTTGG+TGG | + | chr4.1:10254391-10254410 | MS.gene57292:CDS | 50.0% | |
| CTAGGTACCTCTTTCAACGG+CGG | - | chr4.1:10253232-10253251 | None:intergenic | 50.0% | |
| CTCTTGTTGGATGGTCGAAG+GGG | - | chr4.1:10254430-10254449 | None:intergenic | 50.0% | |
| CTCTTTCCTCCATGCAGTTG+TGG | + | chr4.1:10256026-10256045 | MS.gene57292:intron | 50.0% | |
| CTTTCCTCCATGCAGTTGTG+GGG | + | chr4.1:10256028-10256047 | MS.gene57292:intron | 50.0% | |
| GACCGAAAAGGAGCAGTGTT+TGG | + | chr4.1:10254388-10254407 | MS.gene57292:CDS | 50.0% | |
| GCAGTAAACGACGACGTATC+AGG | - | chr4.1:10252950-10252969 | None:intergenic | 50.0% | |
| GGTTCATGTGTCTGTGAGTG+AGG | - | chr4.1:10255903-10255922 | None:intergenic | 50.0% | |
| GTGCACATCATAACCCGTGT+GGG | - | chr4.1:10254902-10254921 | None:intergenic | 50.0% | |
| TACAAAGCCCCACAACTGCA+TGG | - | chr4.1:10256038-10256057 | None:intergenic | 50.0% | |
| TACTATGGAAGGAGGACGAG+AGG | - | chr4.1:10252772-10252791 | None:intergenic | 50.0% | |
| TCCCTTTCGCCATCTTGTGT+TGG | - | chr4.1:10253163-10253182 | None:intergenic | 50.0% | |
| TGTACCAGCAAACTAGGTCC+AGG | - | chr4.1:10253551-10253570 | None:intergenic | 50.0% | |
| TGTGCACATCATAACCCGTG+TGG | - | chr4.1:10254903-10254922 | None:intergenic | 50.0% | |
| ! | CTTTTCGGTCTCCAACAACC+TGG | - | chr4.1:10254378-10254397 | None:intergenic | 50.0% |
| ! | GACTTTCTAGCGATTGGTGG+GGG | + | chr4.1:10255625-10255644 | MS.gene57292:CDS | 50.0% |
| !! | AGAGGTACCTAGTGTGCCTT+TGG | + | chr4.1:10253240-10253259 | MS.gene57292:CDS | 50.0% |
| !! | GAGGACGAGAGGGTTTGTTA+TGG | - | chr4.1:10252761-10252780 | None:intergenic | 50.0% |
| !! | TGAGCAAAACAGAGGCACCT+GGG | + | chr4.1:10256089-10256108 | MS.gene57292:CDS | 50.0% |
| !! | TTGAGCAAAACAGAGGCACC+TGG | + | chr4.1:10256088-10256107 | MS.gene57292:CDS | 50.0% |
| !!! | ACCCGTCGCCCTCATTTTTT+GGG | + | chr4.1:10255010-10255029 | MS.gene57292:intron | 50.0% |
| AAAGCCCCACAACTGCATGG+AGG | - | chr4.1:10256035-10256054 | None:intergenic | 55.0% | |
| ATTGTGACTGCAGCTGGACC+TGG | + | chr4.1:10253034-10253053 | MS.gene57292:CDS | 55.0% | |
| CAAAAAATGAGGGCGACGGG+TGG | - | chr4.1:10255011-10255030 | None:intergenic | 55.0% | |
| CCTGTCGTATATCGCCCAAC+AGG | + | chr4.1:10254603-10254622 | MS.gene57292:CDS | 55.0% | |
| CCTGTTGGGCGATATACGAC+AGG | - | chr4.1:10254606-10254625 | None:intergenic | 55.0% | |
| ! | AGGAGCAGTGTTTGGTGGCT+TGG | + | chr4.1:10254396-10254415 | MS.gene57292:CDS | 55.0% |
| ! | CGGAGAAGTATGCTTTGGCC+TGG | + | chr4.1:10253530-10253549 | MS.gene57292:CDS | 55.0% |
| ! | TGAGTCTGATGGGTGTGGTG+TGG | + | chr4.1:10253189-10253208 | MS.gene57292:CDS | 55.0% |
| ! | TTGGCCTGGACCTAGTTTGC+TGG | + | chr4.1:10253544-10253563 | MS.gene57292:CDS | 55.0% |
| ! | TTTCTAGCGATTGGTGGGGG+AGG | + | chr4.1:10255628-10255647 | MS.gene57292:CDS | 55.0% |
| !!! | CACCCGTCGCCCTCATTTTT+TGG | + | chr4.1:10255009-10255028 | MS.gene57292:intron | 55.0% |
| AGGCACCTGGGATCTCTCGC+TGG | + | chr4.1:10256101-10256120 | MS.gene57292:CDS | 65.0% | |
| AGGGGGGGAAAAGGTTGGGG+AGG | - | chr4.1:10255924-10255943 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 10252675 | 10256126 | 10252675 | ID=MS.gene57292 |
| chr4.1 | mRNA | 10252675 | 10256126 | 10252675 | ID=MS.gene57292.t1;Parent=MS.gene57292 |
| chr4.1 | exon | 10252675 | 10252788 | 10252675 | ID=MS.gene57292.t1.exon1;Parent=MS.gene57292.t1 |
| chr4.1 | CDS | 10252675 | 10252788 | 10252675 | ID=cds.MS.gene57292.t1;Parent=MS.gene57292.t1 |
| chr4.1 | exon | 10252893 | 10253383 | 10252893 | ID=MS.gene57292.t1.exon2;Parent=MS.gene57292.t1 |
| chr4.1 | CDS | 10252893 | 10253383 | 10252893 | ID=cds.MS.gene57292.t1;Parent=MS.gene57292.t1 |
| chr4.1 | exon | 10253493 | 10253565 | 10253493 | ID=MS.gene57292.t1.exon3;Parent=MS.gene57292.t1 |
| chr4.1 | CDS | 10253493 | 10253565 | 10253493 | ID=cds.MS.gene57292.t1;Parent=MS.gene57292.t1 |
| chr4.1 | exon | 10254379 | 10254459 | 10254379 | ID=MS.gene57292.t1.exon4;Parent=MS.gene57292.t1 |
| chr4.1 | CDS | 10254379 | 10254459 | 10254379 | ID=cds.MS.gene57292.t1;Parent=MS.gene57292.t1 |
| chr4.1 | exon | 10254561 | 10254624 | 10254561 | ID=MS.gene57292.t1.exon5;Parent=MS.gene57292.t1 |
| chr4.1 | CDS | 10254561 | 10254624 | 10254561 | ID=cds.MS.gene57292.t1;Parent=MS.gene57292.t1 |
| chr4.1 | exon | 10255593 | 10255680 | 10255593 | ID=MS.gene57292.t1.exon6;Parent=MS.gene57292.t1 |
| chr4.1 | CDS | 10255593 | 10255680 | 10255593 | ID=cds.MS.gene57292.t1;Parent=MS.gene57292.t1 |
| chr4.1 | exon | 10255799 | 10255883 | 10255799 | ID=MS.gene57292.t1.exon7;Parent=MS.gene57292.t1 |
| chr4.1 | CDS | 10255799 | 10255883 | 10255799 | ID=cds.MS.gene57292.t1;Parent=MS.gene57292.t1 |
| chr4.1 | exon | 10256043 | 10256126 | 10256043 | ID=MS.gene57292.t1.exon8;Parent=MS.gene57292.t1 |
| chr4.1 | CDS | 10256043 | 10256126 | 10256043 | ID=cds.MS.gene57292.t1;Parent=MS.gene57292.t1 |
| Gene Sequence |
| Protein sequence |
