AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene70123

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene70123.t1 MTR_8g096050 99.406 505 3 0 1 505 1 505 0.0 1039
MS.gene70123.t1 MTR_3g098460 79.830 471 95 0 35 505 13 483 0.0 800
MS.gene70123.t1 MTR_7g084400 72.464 483 120 3 31 505 11 488 0.0 740
MS.gene70123.t1 MTR_7g084400 69.118 408 119 4 31 434 11 415 0.0 590
MS.gene70123.t1 MTR_7g084400 31.319 182 118 3 321 500 207 383 3.15e-19 90.5
MS.gene70123.t1 MTR_5g009500 38.436 307 162 8 225 505 36 341 1.59e-59 200
MS.gene70123.t1 MTR_8g027975 36.013 311 166 8 225 505 49 356 1.40e-58 198
MS.gene70123.t1 MTR_3g107510 37.410 278 170 2 225 502 120 393 7.84e-54 186
MS.gene70123.t1 MTR_1g012030 38.129 278 168 2 225 502 137 410 1.31e-53 186
MS.gene70123.t1 MTR_4g114320 38.351 279 166 4 225 502 121 394 3.72e-53 184
MS.gene70123.t1 MTR_4g114320 27.304 293 180 9 220 500 24 295 1.12e-20 94.4
MS.gene70123.t1 MTR_3g104600 32.237 304 173 7 227 504 35 331 4.39e-47 167
MS.gene70123.t1 MTR_6g091800 32.051 312 189 6 211 504 2 308 4.84e-45 160
MS.gene70123.t1 MTR_6g091800 33.166 199 120 4 318 505 16 212 2.90e-25 106
MS.gene70123.t1 MTR_7g064980 32.119 302 169 7 227 503 25 315 3.87e-44 158
MS.gene70123.t1 MTR_7g064980 30.693 202 125 4 311 500 15 213 4.27e-23 100
MS.gene70123.t1 MTR_7g064980 27.753 227 150 5 187 406 98 317 2.09e-19 89.4
MS.gene70123.t1 MTR_6g091800 30.240 334 186 7 211 502 2 330 1.42e-42 155
MS.gene70123.t1 MTR_2g436930 30.820 305 171 7 229 496 17 318 7.19e-39 144
MS.gene70123.t1 MTR_2g436930 31.088 193 116 3 323 500 17 207 1.24e-21 96.3
MS.gene70123.t1 MTR_2g436930 26.341 205 127 6 220 401 119 322 2.10e-13 71.6
MS.gene70123.t1 MTR_5g081150 32.423 293 176 7 227 502 34 321 1.30e-36 138
MS.gene70123.t1 MTR_5g081150 33.696 184 112 5 226 402 140 320 1.39e-15 78.2
MS.gene70123.t1 MTR_5g081150 33.000 200 115 6 314 500 27 220 1.63e-15 78.2
MS.gene70123.t1 MTR_6g091800 32.283 254 151 5 211 448 2 250 2.33e-36 136
MS.gene70123.t1 MTR_6g091800 33.166 199 120 4 318 505 16 212 1.96e-25 105
MS.gene70123.t1 MTR_4g119770 29.936 314 178 7 229 503 16 326 4.39e-36 137
MS.gene70123.t1 MTR_4g119770 25.121 207 129 6 219 401 119 323 1.45e-13 72.0
MS.gene70123.t1 MTR_6g091800 29.114 316 177 7 211 484 2 312 5.80e-36 136
MS.gene70123.t1 MTR_6g091800 32.400 250 148 5 211 444 2 246 2.61e-35 133
MS.gene70123.t1 MTR_6g091800 33.166 199 120 4 318 505 16 212 1.89e-25 105
MS.gene70123.t1 MTR_7g109135 32.646 291 171 8 229 502 24 306 2.71e-35 134
MS.gene70123.t1 MTR_6g034145 31.250 256 157 4 263 504 4 254 5.45e-35 132
MS.gene70123.t1 MTR_6g034145 33.784 148 86 3 369 505 12 158 3.20e-19 87.8
MS.gene70123.t1 MTR_6g091800 29.856 278 150 6 211 448 2 274 3.63e-34 130
MS.gene70123.t1 MTR_6g091800 29.596 223 120 4 318 505 16 236 4.31e-22 97.1
MS.gene70123.t1 MTR_6g092210 30.645 248 159 4 263 502 4 246 2.03e-33 127
MS.gene70123.t1 MTR_6g092210 31.690 142 91 2 369 505 12 152 3.39e-16 79.0
MS.gene70123.t1 MTR_7g068340 29.412 272 168 7 238 500 98 354 2.42e-33 130
MS.gene70123.t1 MTR_7g068340 32.749 171 102 3 337 502 103 265 6.82e-20 92.0
MS.gene70123.t1 MTR_7g068340 25.862 174 122 2 229 402 189 355 9.34e-17 82.4
MS.gene70123.t1 MTR_6g091800 29.927 274 147 6 211 444 2 270 3.87e-33 127
MS.gene70123.t1 MTR_6g091800 29.596 223 120 4 318 505 16 236 4.59e-22 96.7
MS.gene70123.t1 MTR_3g074490 33.775 302 172 7 224 505 113 406 4.86e-33 130
MS.gene70123.t1 MTR_3g074490 25.269 186 131 3 316 501 111 288 6.19e-12 67.8
MS.gene70123.t1 MTR_1g087840 31.317 281 168 7 239 502 31 303 1.38e-32 127
MS.gene70123.t1 MTR_8g076760 34.875 281 161 7 243 504 30 307 7.92e-32 124
MS.gene70123.t1 MTR_8g090210 32.039 309 180 10 218 505 101 400 8.53e-32 126
MS.gene70123.t1 MTR_4g005330 29.276 304 169 10 225 499 64 350 2.17e-31 124
MS.gene70123.t1 MTR_4g005330 28.235 170 114 3 237 402 187 352 1.03e-11 67.0
MS.gene70123.t1 MTR_3g104500 26.885 305 199 6 218 504 25 323 1.00e-30 122
MS.gene70123.t1 MTR_4g005330 28.904 301 168 10 228 499 1 284 8.58e-30 118
MS.gene70123.t1 MTR_4g005330 28.235 170 114 3 237 402 121 286 1.94e-11 65.5
MS.gene70123.t1 MTR_7g109135 30.584 291 170 9 229 502 24 299 3.22e-29 117
MS.gene70123.t1 MTR_7g109135 33.191 235 140 6 277 502 2 228 3.64e-29 115
MS.gene70123.t1 MTR_4g016730 31.034 290 159 8 227 500 89 353 6.17e-29 118
MS.gene70123.t1 MTR_1g095780 23.673 452 314 13 57 503 360 785 2.88e-27 116
MS.gene70123.t1 MTR_4g012850 27.798 277 191 5 225 496 14 286 3.51e-27 111
MS.gene70123.t1 MTR_4g012850 28.497 193 122 7 317 502 11 194 9.85e-12 66.2
MS.gene70123.t1 MTR_2g436930 30.870 230 136 6 287 496 2 228 7.74e-27 108
MS.gene70123.t1 MTR_2g436930 26.214 206 128 6 219 401 28 232 6.68e-14 71.6
MS.gene70123.t1 MTR_5g055410 32.740 281 164 9 239 502 33 305 2.09e-26 110
MS.gene70123.t1 MTR_5g055410 28.947 190 114 6 239 413 131 314 3.16e-12 68.6
MS.gene70123.t1 MTR_7g109135 33.645 214 125 6 298 502 2 207 4.31e-26 106
MS.gene70123.t1 MTR_8g107270 27.143 280 184 6 227 490 18 293 4.51e-25 105
MS.gene70123.t1 MTR_6g091910 30.457 197 121 4 318 502 16 208 6.40e-25 102
MS.gene70123.t1 MTR_6g091910 26.316 209 132 6 211 401 2 206 1.60e-15 75.9
MS.gene70123.t1 MTR_4g119770 29.435 248 142 5 229 446 16 260 8.38e-25 103
MS.gene70123.t1 MTR_4g119770 29.048 210 126 4 308 500 5 208 3.18e-21 93.6
MS.gene70123.t1 MTR_3g025800 27.864 323 196 8 214 503 14 332 1.59e-24 105
MS.gene70123.t1 MTR_8g098240 26.644 289 202 4 218 505 311 590 3.40e-22 100
MS.gene70123.t1 MTR_5g073040 29.000 300 187 11 214 499 24 311 1.67e-21 95.9
MS.gene70123.t1 MTR_5g073040 28.962 183 122 2 321 503 39 213 5.93e-20 91.3
MS.gene70123.t1 MTR_5g081150 32.273 220 129 6 227 431 34 248 2.86e-21 93.6
MS.gene70123.t1 MTR_5g081150 33.000 200 115 6 314 500 27 220 4.65e-16 78.6
MS.gene70123.t1 MTR_5g081150 32.273 220 129 6 227 431 34 248 4.77e-21 92.8
MS.gene70123.t1 MTR_5g081150 33.000 200 115 6 314 500 27 220 4.28e-16 78.6
MS.gene70123.t1 MTR_6g034515 28.464 267 170 7 243 499 83 338 6.61e-21 94.7
MS.gene70123.t1 MTR_2g102010 27.915 283 198 3 225 503 15 295 6.75e-21 93.6
MS.gene70123.t1 MTR_1g097890 27.698 278 173 6 228 502 52 304 2.07e-20 92.4
MS.gene70123.t1 MTR_3g028590 28.028 289 170 9 227 490 93 368 2.84e-20 93.2
MS.gene70123.t1 MTR_3g028590 28.028 289 170 9 227 490 97 372 3.04e-20 93.2
MS.gene70123.t1 MTR_8g092080 29.032 279 168 7 228 502 53 305 1.22e-19 90.1
MS.gene70123.t1 MTR_6g091800 33.333 171 101 4 318 477 16 184 2.21e-19 86.3
MS.gene70123.t1 MTR_6g091800 35.971 139 84 3 211 345 2 139 7.41e-19 85.1
MS.gene70123.t1 MTR_6g091800 35.971 139 84 3 211 345 2 139 9.39e-19 85.1
MS.gene70123.t1 MTR_6g091800 29.231 195 101 4 318 477 16 208 4.54e-16 77.4
MS.gene70123.t1 MTR_1g105410 29.431 299 172 13 229 501 13 298 2.06e-18 86.7
MS.gene70123.t1 MTR_8g036880 26.667 285 180 7 227 490 102 378 5.27e-18 86.3
MS.gene70123.t1 MTR_4g018750 28.231 294 178 10 227 500 15 295 1.10e-17 84.3
MS.gene70123.t1 MTR_1g090330 30.168 179 113 5 310 481 4 177 1.96e-17 83.6
MS.gene70123.t1 MTR_1g090330 24.468 282 195 6 232 500 19 295 2.20e-16 80.1
MS.gene70123.t1 MTR_5g081910 26.296 270 155 10 266 498 53 315 2.70e-17 83.6
MS.gene70123.t1 MTR_8g066975 26.578 301 180 7 229 502 10 296 2.84e-17 82.8
MS.gene70123.t1 MTR_8g066975 28.426 197 121 7 321 502 8 199 1.78e-13 71.6
MS.gene70123.t1 MTR_4g078545 27.465 284 178 9 227 490 75 350 3.91e-17 83.6
MS.gene70123.t1 MTR_5g081910 29.245 212 119 8 314 498 34 241 8.30e-17 80.9
MS.gene70123.t1 MTR_1g088995 26.573 286 197 7 226 505 32 310 2.94e-16 80.1
MS.gene70123.t1 MTR_5g030530 26.910 301 189 8 224 502 5 296 4.48e-16 79.3
MS.gene70123.t1 MTR_2g098070 27.500 280 183 7 227 490 66 341 6.36e-16 79.7
MS.gene70123.t1 MTR_7g117030 25.098 255 171 7 266 503 85 336 2.44e-15 77.8
MS.gene70123.t1 MTR_7g066690 26.846 298 177 9 227 500 17 297 4.42e-15 76.3
MS.gene70123.t1 MTR_1g036280 25.168 298 166 10 260 504 64 357 1.28e-14 75.9
MS.gene70123.t1 MTR_2g032610 26.190 294 192 11 223 496 25 313 1.74e-14 74.7
MS.gene70123.t1 MTR_2g032610 26.804 194 125 3 224 400 123 316 5.48e-12 67.4
MS.gene70123.t1 MTR_4g057850 23.841 302 212 8 209 498 4 299 2.93e-14 73.9
MS.gene70123.t1 MTR_6g015860 23.377 308 208 8 214 500 4 304 3.85e-14 73.9
MS.gene70123.t1 MTR_6g015860 26.857 175 121 4 333 502 29 201 5.24e-13 70.5
MS.gene70123.t1 MTR_1g088995 28.846 156 104 3 325 479 37 186 1.05e-13 71.2
MS.gene70123.t1 MTR_4g088545 28.571 189 122 4 323 502 14 198 2.71e-13 70.1
MS.gene70123.t1 MTR_7g015870 22.330 309 198 9 220 500 18 312 3.20e-13 70.9
MS.gene70123.t1 MTR_7g015870 28.571 210 127 7 214 405 112 316 1.48e-12 68.9
MS.gene70123.t1 MTR_4g094578 23.404 282 197 9 227 499 29 300 3.41e-13 70.9
MS.gene70123.t1 MTR_1g026190 29.861 144 91 3 56 194 388 526 4.16e-13 72.0
MS.gene70123.t1 MTR_8g086070 31.325 166 102 5 324 485 24 181 5.19e-13 68.6
MS.gene70123.t1 MTR_6g033280 28.436 211 142 5 228 432 64 271 5.35e-13 70.9
MS.gene70123.t1 MTR_6g033280 25.281 178 122 4 324 498 66 235 7.99e-11 63.9
MS.gene70123.t1 MTR_4g088545 28.571 189 122 4 323 502 14 198 7.86e-13 69.3
MS.gene70123.t1 MTR_4g088545 28.571 189 122 4 323 502 14 198 1.30e-12 68.9
MS.gene70123.t1 MTR_7g015870 22.549 306 195 9 223 500 17 308 1.34e-12 69.3
MS.gene70123.t1 MTR_7g015870 28.708 209 126 7 214 404 108 311 2.98e-12 68.2
MS.gene70123.t1 MTR_4g132070 28.302 159 106 4 41 192 381 538 3.47e-12 68.9
MS.gene70123.t1 MTR_7g083790 30.734 218 136 7 229 435 83 296 3.47e-12 68.6
MS.gene70123.t1 MTR_3g462140 24.839 310 185 9 219 500 7 296 6.96e-12 66.6
MS.gene70123.t1 MTR_4g018750 27.481 262 157 10 227 468 15 263 9.99e-12 66.2
MS.gene70123.t1 MTR_3g090820 23.846 260 175 7 264 503 132 388 1.64e-11 66.6
MS.gene70123.t1 MTR_8g099910 27.602 221 139 6 229 435 74 287 1.82e-11 66.2
MS.gene70123.t1 MTR_8g099910 28.042 189 113 7 317 498 73 245 4.72e-11 64.7
MS.gene70123.t1 MTR_5g039730 27.241 290 182 10 229 498 13 293 1.97e-11 65.5
MS.gene70123.t1 MTR_5g009830 30.370 135 88 3 50 179 366 499 2.05e-11 66.6
MS.gene70123.t1 MTR_1g095780 24.016 254 164 8 57 289 360 605 4.54e-11 65.9
MS.gene70123.t1 MTR_4g132040 32.414 145 87 5 56 192 401 542 9.52e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene70123.t1 AT5G51050 74.349 499 121 3 9 505 5 498 0.0 768
MS.gene70123.t1 AT5G07320 75.158 475 110 2 31 505 13 479 0.0 748
MS.gene70123.t1 AT5G61810 68.763 477 139 4 30 505 11 478 0.0 689
MS.gene70123.t1 AT5G61810 70.640 344 91 4 163 505 1 335 1.03e-177 503
MS.gene70123.t1 AT4G01100 38.462 312 157 8 225 505 40 347 9.73e-63 209
MS.gene70123.t1 AT4G01100 35.411 353 169 11 204 505 17 361 7.05e-60 201
MS.gene70123.t1 AT4G01100 38.333 300 150 8 237 505 2 297 3.85e-59 197
MS.gene70123.t1 AT4G01100 25.714 175 125 1 330 499 1 175 1.72e-18 86.7
MS.gene70123.t1 AT4G01100 28.365 208 121 5 229 410 97 302 2.65e-14 73.9
MS.gene70123.t1 AT4G32400 36.918 279 170 3 225 502 112 385 2.51e-52 182
MS.gene70123.t1 AT4G32400 30.366 191 130 3 214 402 195 384 1.13e-17 85.5
MS.gene70123.t1 AT3G53940 35.274 292 171 6 227 503 73 361 4.28e-46 165
MS.gene70123.t1 AT3G53940 32.367 207 126 6 302 499 57 258 2.09e-21 96.3
MS.gene70123.t1 AT3G53940 29.060 234 133 6 176 402 152 359 5.81e-21 94.7
MS.gene70123.t1 AT4G26180 31.229 301 180 6 224 504 18 311 1.24e-44 160
MS.gene70123.t1 AT3G55640 34.114 299 173 9 219 499 30 322 2.16e-43 157
MS.gene70123.t1 AT3G55640 30.288 208 122 7 308 500 25 224 1.21e-19 90.5
MS.gene70123.t1 AT3G55640 34.114 299 173 9 219 499 30 322 2.16e-43 157
MS.gene70123.t1 AT3G55640 30.288 208 122 7 308 500 25 224 1.21e-19 90.5
MS.gene70123.t1 AT1G14560 31.930 285 166 8 238 499 38 317 8.69e-41 150
MS.gene70123.t1 AT1G14560 29.412 187 111 4 332 502 38 219 1.50e-19 90.1
MS.gene70123.t1 AT2G37890 31.757 296 174 6 227 502 45 332 2.45e-40 149
MS.gene70123.t1 AT2G37890 34.518 197 118 4 312 499 36 230 1.12e-24 105
MS.gene70123.t1 AT2G37890 35.326 184 109 5 226 402 151 331 6.27e-24 103
MS.gene70123.t1 AT4G26180 30.824 279 170 5 224 484 18 291 6.53e-39 143
MS.gene70123.t1 AT4G26180 32.663 199 115 4 318 502 18 211 3.55e-25 105
MS.gene70123.t1 AT3G21390 30.293 307 172 7 229 496 21 324 9.39e-36 136
MS.gene70123.t1 AT3G21390 29.319 191 120 3 323 500 21 209 3.22e-20 92.4
MS.gene70123.t1 AT3G21390 30.293 307 172 7 229 496 43 346 1.15e-35 136
MS.gene70123.t1 AT3G21390 29.319 191 120 3 323 500 43 231 4.51e-20 92.0
MS.gene70123.t1 AT1G14560 31.111 270 158 8 238 484 38 302 7.54e-35 133
MS.gene70123.t1 AT1G14560 29.412 187 111 4 332 502 38 219 7.62e-20 90.5
MS.gene70123.t1 AT5G64970 31.562 320 185 8 209 505 117 425 2.38e-34 134
MS.gene70123.t1 AT5G66380 33.677 291 174 6 229 502 12 300 3.55e-34 131
MS.gene70123.t1 AT3G51870 30.515 272 165 7 238 500 102 358 3.57e-34 133
MS.gene70123.t1 AT3G51870 30.409 171 106 3 337 502 107 269 1.28e-17 85.1
MS.gene70123.t1 AT3G51870 26.136 176 119 3 229 402 193 359 2.78e-14 75.1
MS.gene70123.t1 AT5G01500 31.868 273 160 9 238 500 130 386 3.22e-33 130
MS.gene70123.t1 AT5G01500 32.749 171 102 3 337 502 135 297 1.37e-19 91.3
MS.gene70123.t1 AT5G01500 29.310 174 116 2 229 402 221 387 2.71e-13 72.0
MS.gene70123.t1 AT5G64970 32.226 301 170 8 228 505 12 301 6.75e-33 127
MS.gene70123.t1 AT5G48970 29.545 308 174 8 229 496 24 328 2.51e-32 127
MS.gene70123.t1 AT5G48970 31.088 193 116 4 323 500 24 214 1.48e-20 93.2
MS.gene70123.t1 AT5G48970 26.190 210 124 6 220 401 126 332 1.55e-14 75.5
MS.gene70123.t1 AT3G20240 28.990 307 178 7 222 502 47 339 1.59e-29 119
MS.gene70123.t1 AT2G35800 23.395 483 335 12 23 502 355 805 5.97e-29 121
MS.gene70123.t1 AT2G47490 31.522 276 173 6 239 502 29 300 7.65e-29 116
MS.gene70123.t1 AT5G56450 26.073 303 198 6 222 503 29 326 9.38e-29 116
MS.gene70123.t1 AT1G78180 30.693 303 186 5 221 505 122 418 1.33e-28 118
MS.gene70123.t1 AT3G53940 35.321 218 125 5 227 431 73 287 2.33e-28 114
MS.gene70123.t1 AT3G53940 32.367 207 126 6 302 499 57 258 6.37e-22 96.3
MS.gene70123.t1 AT3G55640 34.061 229 129 7 219 431 30 252 4.26e-28 113
MS.gene70123.t1 AT3G55640 30.288 208 122 7 308 500 25 224 1.97e-20 91.3
MS.gene70123.t1 AT3G55640 34.061 229 129 7 219 431 30 252 4.26e-28 113
MS.gene70123.t1 AT3G55640 30.288 208 122 7 308 500 25 224 1.97e-20 91.3
MS.gene70123.t1 AT5G48970 30.000 260 156 7 260 496 1 257 2.57e-27 111
MS.gene70123.t1 AT5G48970 34.043 141 89 3 362 500 5 143 2.34e-17 82.4
MS.gene70123.t1 AT5G48970 26.190 210 124 6 220 401 55 261 3.16e-15 76.3
MS.gene70123.t1 AT5G64970 30.435 299 174 8 209 484 117 404 4.53e-27 113
MS.gene70123.t1 AT5G64970 28.649 185 124 3 315 499 129 305 1.16e-13 73.2
MS.gene70123.t1 AT1G25380 31.408 277 166 9 239 498 33 302 9.94e-27 111
MS.gene70123.t1 AT1G25380 31.408 277 166 9 239 498 33 302 9.94e-27 111
MS.gene70123.t1 AT1G14560 32.161 199 111 6 321 499 25 219 6.63e-26 106
MS.gene70123.t1 AT1G14560 27.966 118 69 2 401 502 4 121 1.16e-11 65.1
MS.gene70123.t1 AT1G14560 25.500 200 120 5 227 401 25 220 3.25e-11 63.9
MS.gene70123.t1 AT1G74240 27.476 313 182 6 225 502 34 336 2.07e-25 107
MS.gene70123.t1 AT1G74240 26.601 203 122 4 324 503 39 237 1.45e-14 75.5
MS.gene70123.t1 AT1G34065 28.669 293 171 9 220 503 73 336 1.46e-22 99.4
MS.gene70123.t1 AT1G34065 28.669 293 171 9 220 503 66 329 1.52e-22 99.0
MS.gene70123.t1 AT5G17400 28.669 293 183 8 217 490 4 289 1.91e-22 98.2
MS.gene70123.t1 AT4G11440 26.102 295 208 4 214 504 317 605 5.96e-22 99.8
MS.gene70123.t1 AT4G11440 26.102 295 208 4 214 504 317 605 5.96e-22 99.8
MS.gene70123.t1 AT2G30160 27.915 283 186 5 228 499 43 318 1.89e-21 95.9
MS.gene70123.t1 AT2G30160 27.322 183 123 4 321 502 42 215 3.18e-14 74.3
MS.gene70123.t1 AT1G74240 26.441 295 172 6 243 502 4 288 2.76e-21 95.1
MS.gene70123.t1 AT1G74240 25.521 192 116 4 335 503 2 189 1.57e-11 65.9
MS.gene70123.t1 AT1G14140 26.855 283 186 9 232 499 21 297 1.31e-20 92.8
MS.gene70123.t1 AT1G14140 27.746 173 117 4 317 481 12 184 6.23e-15 75.9
MS.gene70123.t1 AT1G07030 28.472 288 181 7 225 499 38 313 1.44e-20 93.2
MS.gene70123.t1 AT1G07030 27.473 182 124 2 321 502 40 213 1.72e-15 78.2
MS.gene70123.t1 AT4G39460 29.391 279 169 6 227 502 58 311 2.05e-20 92.8
MS.gene70123.t1 AT4G39460 29.391 279 169 6 227 502 58 311 2.05e-20 92.8
MS.gene70123.t1 AT4G39460 29.391 279 169 6 227 502 58 311 2.05e-20 92.8
MS.gene70123.t1 AT5G58970 26.990 289 188 6 227 500 16 296 4.21e-20 91.3
MS.gene70123.t1 AT4G28390 27.817 284 177 9 227 490 83 358 1.14e-18 88.2
MS.gene70123.t1 AT4G28390 27.817 284 177 9 227 490 83 358 1.14e-18 88.2
MS.gene70123.t1 AT3G54110 28.082 292 185 8 225 500 13 295 1.29e-18 87.0
MS.gene70123.t1 AT5G46800 26.263 297 189 7 229 502 10 299 2.12e-18 86.3
MS.gene70123.t1 AT5G46800 26.263 297 189 7 229 502 10 299 2.12e-18 86.3
MS.gene70123.t1 AT5G46800 26.263 297 189 7 229 502 10 299 2.12e-18 86.3
MS.gene70123.t1 AT5G13490 27.148 291 171 10 227 490 88 364 2.81e-17 84.0
MS.gene70123.t1 AT5G13490 27.148 291 171 10 227 490 88 364 2.81e-17 84.0
MS.gene70123.t1 AT5G42130 26.316 266 178 5 243 499 134 390 5.00e-17 83.6
MS.gene70123.t1 AT3G08580 26.316 285 181 7 227 490 84 360 1.04e-16 82.4
MS.gene70123.t1 AT3G08580 26.316 285 181 7 227 490 84 360 1.04e-16 82.4
MS.gene70123.t1 AT1G79900 24.621 264 191 2 233 496 22 277 4.63e-16 79.3
MS.gene70123.t1 AT1G79900 30.409 171 111 4 230 397 112 277 2.74e-14 73.9
MS.gene70123.t1 AT3G05290 27.703 296 175 12 229 498 13 295 1.79e-15 77.8
MS.gene70123.t1 AT2G39970 23.810 273 172 9 266 504 53 323 6.32e-15 76.3
MS.gene70123.t1 AT5G15640 24.013 304 207 7 217 500 11 310 1.50e-14 75.1
MS.gene70123.t1 AT5G27520 28.231 294 176 11 229 498 15 297 2.66e-14 74.3
MS.gene70123.t1 AT2G33820 25.249 301 192 11 227 504 18 308 3.58e-14 73.9
MS.gene70123.t1 AT5G26200 27.273 308 195 10 219 500 31 335 5.63e-14 73.6
MS.gene70123.t1 AT5G26200 28.378 222 132 8 210 405 119 339 3.09e-11 65.5
MS.gene70123.t1 AT5G01340 23.345 287 195 9 228 498 18 295 6.15e-14 73.2
MS.gene70123.t1 AT5G15640 23.826 298 203 7 223 500 24 317 7.25e-14 73.2
MS.gene70123.t1 AT2G26360 25.532 282 194 7 222 502 110 376 7.50e-14 73.6
MS.gene70123.t1 AT4G04720 29.861 144 94 3 42 179 370 512 4.74e-13 72.0
MS.gene70123.t1 AT4G04720 29.861 144 94 3 42 179 370 512 4.74e-13 72.0
MS.gene70123.t1 AT4G04740 30.935 139 90 2 50 183 368 505 5.06e-13 71.6
MS.gene70123.t1 AT4G04740 30.935 139 90 2 50 183 368 505 5.06e-13 71.6
MS.gene70123.t1 AT4G04740 30.935 139 90 2 50 183 368 505 5.06e-13 71.6
MS.gene70123.t1 AT4G04740 30.935 139 90 2 50 183 368 505 5.06e-13 71.6
MS.gene70123.t1 AT4G04740 30.935 139 90 2 50 183 368 505 5.06e-13 71.6
MS.gene70123.t1 AT4G04740 30.935 139 90 2 50 183 368 505 5.06e-13 71.6
MS.gene70123.t1 AT4G27940 24.506 253 169 5 266 499 155 404 1.01e-12 70.5
MS.gene70123.t1 AT3G48850 27.119 177 120 3 323 497 73 242 2.05e-12 68.9
MS.gene70123.t1 AT3G48850 29.258 229 146 7 220 435 60 285 2.53e-11 65.9
MS.gene70123.t1 AT4G04695 30.935 139 90 2 50 183 331 468 4.34e-12 68.6
MS.gene70123.t1 AT4G24570 23.750 320 189 9 225 502 4 310 4.48e-12 67.4
MS.gene70123.t1 AT2G33820 24.595 309 192 12 227 504 18 316 5.02e-12 67.4
MS.gene70123.t1 AT1G72820 22.581 310 208 6 223 500 27 336 6.08e-12 67.4
MS.gene70123.t1 AT1G72820 25.974 231 135 7 210 405 111 340 8.97e-12 67.0
MS.gene70123.t1 AT1G72820 22.581 310 208 6 223 500 27 336 6.08e-12 67.4
MS.gene70123.t1 AT1G72820 25.974 231 135 7 210 405 111 340 8.97e-12 67.0
MS.gene70123.t1 AT5G14040 26.344 186 122 5 318 498 79 254 7.27e-12 67.4
MS.gene70123.t1 AT5G14040 29.200 250 159 9 230 465 84 329 4.95e-11 65.1
MS.gene70123.t1 AT4G03115 23.860 285 191 7 226 499 69 338 2.85e-11 65.5
MS.gene70123.t1 AT4G21940 28.472 144 96 3 42 179 392 534 3.19e-11 66.2
MS.gene70123.t1 AT4G21940 28.472 144 96 3 42 179 392 534 3.37e-11 66.2
MS.gene70123.t1 AT4G03115 26.923 182 117 6 325 502 42 211 6.54e-11 62.8
MS.gene70123.t1 AT4G03115 23.860 285 191 7 226 499 37 306 6.77e-11 63.9
MS.gene70123.t1 AT4G03115 26.923 182 117 6 325 502 42 211 8.30e-11 62.4

Find 130 sgRNAs with CRISPR-Local

Find 302 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCTACTAACAAAGGGTATT+TGG 0.164478 4.1:+7238861 MS.gene70123:CDS
TGGCAACGAGACGGTTTATT+AGG 0.203876 4.1:+7240856 MS.gene70123:CDS
CTTGGATGTGGGACAGTTTC+GGG 0.228064 4.1:+7241435 MS.gene70123:CDS
GGCCTTGTTCCATCTCTTCT+TGG 0.236132 4.1:+7241183 MS.gene70123:CDS
GTCAGATATAATATATTTCT+TGG 0.259740 4.1:-7241262 None:intergenic
AGAAGTCGCCGGAGATGATT+TGG 0.282313 4.1:-7238713 None:intergenic
TTCAATGGATCATGTTCTAT+TGG 0.289968 4.1:+7238777 MS.gene70123:CDS
TCCTTAGCATATTTATATTC+AGG 0.292787 4.1:-7238928 None:intergenic
CTCGAAAGCCTTCGTCCTTA+AGG 0.303116 4.1:-7242101 None:intergenic
GGCACAACTTTGAGGAGATT+TGG 0.303845 4.1:-7242144 None:intergenic
CGCCGGAGATGATTTGGGTT+TGG 0.315050 4.1:-7238707 None:intergenic
TATTCTTCCTGAAGAACTTT+GGG 0.325825 4.1:+7239080 MS.gene70123:CDS
ACCCACGTGGTCCATGTCTA+TGG 0.340694 4.1:-7238680 None:intergenic
TTCATAAGCATAAAACTTGA+TGG 0.341735 4.1:-7240929 None:intergenic
ACTTGGATGTGGGACAGTTT+CGG 0.345888 4.1:+7241434 MS.gene70123:CDS
GAACCCTTACAAAGGATATA+TGG 0.347440 4.1:+7241130 MS.gene70123:CDS
TCGAAAGCCTTCGTCCTTAA+GGG 0.350475 4.1:-7242100 None:intergenic
CTTCATTACTGCTGGCATAA+TGG 0.353220 4.1:-7240830 None:intergenic
AGAGCATCCCAAAGTTCTTC+AGG 0.374338 4.1:-7239087 None:intergenic
TGCCATGCTTCTCAGGCTGC+AGG 0.378131 4.1:+7242020 MS.gene70123:intron
GGCAACGAGACGGTTTATTA+GGG 0.381008 4.1:+7240857 MS.gene70123:CDS
GCTATTGATGTTGAACATAA+TGG 0.381502 4.1:+7239054 MS.gene70123:CDS
CAACACTTCTAGTGCTTACA+AGG 0.382786 4.1:+7242053 MS.gene70123:CDS
GGATCCATATATCCTTTGTA+AGG 0.391902 4.1:-7241134 None:intergenic
TTTCTTGGATATATCTTTCA+AGG 0.392181 4.1:-7241247 None:intergenic
GTATTCTTCCTGAAGAACTT+TGG 0.396947 4.1:+7239079 MS.gene70123:CDS
ATGATCCATTGAAATTGAAC+CGG 0.400793 4.1:-7238767 None:intergenic
TATCCTTTGTAAGGGTTCCT+AGG 0.406046 4.1:-7241125 None:intergenic
AAAACCCGGTTCAATTTCAA+TGG 0.412723 4.1:+7238762 MS.gene70123:CDS
TGCCAGCAGTAATGAAGATA+TGG 0.415808 4.1:+7240836 MS.gene70123:CDS
GAAGTCGCCGGAGATGATTT+GGG 0.420586 4.1:-7238712 None:intergenic
CAAGGGAACAAGTCAGATAT+TGG 0.420941 4.1:+7240979 MS.gene70123:CDS
TTTGTAAGGGTTCCTAGGTT+CGG 0.421581 4.1:-7241120 None:intergenic
GGGACAGTTTCGGGAGCTCT+TGG 0.425562 4.1:+7241444 MS.gene70123:CDS
CTTTGTTGAGCATGTTGATA+AGG 0.428962 4.1:+7240537 MS.gene70123:CDS
AAGAAAGGGATGTTCGTATT+CGG 0.433508 4.1:+7238818 MS.gene70123:CDS
ACATGCTTGCTGATGCCTTC+AGG 0.436950 4.1:-7240694 None:intergenic
CATGTTGATAAGGATAATAA+TGG 0.437979 4.1:+7240547 MS.gene70123:CDS
TGCCATATCTTCATTACTGC+TGG 0.447668 4.1:-7240838 None:intergenic
CTTGGTATGATTCCTTATGC+AGG 0.448812 4.1:+7241201 MS.gene70123:CDS
TGAAAATATATATCAACATT+GGG 0.450630 4.1:+7240630 MS.gene70123:CDS
TTGCAGCCGGCACAACTTTG+AGG 0.450795 4.1:-7242152 None:intergenic
ATTGGCTTTGCGTGAGACTA+AGG 0.453356 4.1:+7238795 MS.gene70123:CDS
AGAAAGCCCGGGGTCCCTCT+TGG 0.455646 4.1:-7241155 None:intergenic
CATTGGATCTTATCAAAACT+AGG 0.459278 4.1:+7241064 MS.gene70123:CDS
GATTATGCTCACATTGAAGC+AGG 0.464288 4.1:+7238883 MS.gene70123:CDS
CACAGCATAAAACACATGTC+TGG 0.464489 4.1:+7238655 None:intergenic
TGGGATGCTCTTGTCAAGGC+TGG 0.469628 4.1:+7239099 MS.gene70123:CDS
GGACCCCGGGCTTTCTATAG+AGG 0.470590 4.1:+7241162 MS.gene70123:CDS
GGCTGCAAGTATTACTTACA+TGG 0.473791 4.1:+7242167 MS.gene70123:CDS
TTCTTTGATGCTACTAACAA+AGG 0.474500 4.1:+7238853 MS.gene70123:CDS
CAAGGCCTCTATAGAAAGCC+CGG 0.474710 4.1:-7241167 None:intergenic
GTGAGATCAATGCCTGCATA+AGG 0.489678 4.1:-7241213 None:intergenic
TTGAAAATATATATCAACAT+TGG 0.489803 4.1:+7240629 MS.gene70123:CDS
CTTGTAAGCACTAGAAGTGT+TGG 0.492262 4.1:-7242052 None:intergenic
CTTAAGGACGAAGGCTTTCG+AGG 0.496296 4.1:+7242102 MS.gene70123:CDS
TGCGTGAGACTAAGGAAGAA+AGG 0.499336 4.1:+7238803 MS.gene70123:CDS
TAAAACTTGATGGCGCTCTC+AGG 0.501460 4.1:-7240919 None:intergenic
CCTGGTCCTCTAGTACAACT+TGG 0.503374 4.1:+7241417 MS.gene70123:CDS
TACTTGTGTCTATCCACTGC+AGG 0.508122 4.1:+7241470 MS.gene70123:CDS
CTCCAAACCCAAATCATCTC+CGG 0.511140 4.1:+7238705 MS.gene70123:CDS
CTTGTTCTCCAATGTCTACA+AGG 0.511918 4.1:-7240663 None:intergenic
CACTGCAGGTTATTCGTACA+AGG 0.514518 4.1:+7241484 MS.gene70123:CDS
ACAGCATAAAACACATGTCT+GGG 0.515812 4.1:+7238656 None:intergenic
TCTTTGATGCTACTAACAAA+GGG 0.519028 4.1:+7238854 MS.gene70123:CDS
TGCTCCTCTTGATCGTCTAA+AGG 0.526318 4.1:+7240777 MS.gene70123:CDS
ACAGATTGCTATCTATCCAT+TGG 0.526332 4.1:+7241047 MS.gene70123:CDS
CCTCTAGTACAACTTGGATG+TGG 0.526958 4.1:+7241423 MS.gene70123:CDS
AAGTCAGATATTGGTACTGC+CGG 0.527417 4.1:+7240988 MS.gene70123:CDS
AAATCTCCTCAAAGTTGTGC+CGG 0.530979 4.1:+7242146 MS.gene70123:CDS
GATCCATATATCCTTTGTAA+GGG 0.533301 4.1:-7241133 None:intergenic
TGATCCATTGAAATTGAACC+GGG 0.535986 4.1:-7238766 None:intergenic
CCAAGTTGTACTAGAGGACC+AGG 0.543145 4.1:-7241417 None:intergenic
ACTTCTCCGACCACCGATCA+CGG 0.543289 4.1:+7238730 MS.gene70123:CDS
TATGGATCCAAGAGGGACCC+CGG 0.549177 4.1:+7241148 MS.gene70123:CDS
GCGTGAGACTAAGGAAGAAA+GGG 0.551313 4.1:+7238804 MS.gene70123:CDS
GGAATCATACCAAGAAGAGA+TGG 0.555459 4.1:-7241192 None:intergenic
CAGACATGTGCGTCTGAAGG+TGG 0.558424 4.1:+7241090 MS.gene70123:CDS
AGGCTTTCGAGGGTTCTACA+AGG 0.560865 4.1:+7242113 MS.gene70123:CDS
TTAGCATATTTATATTCAGG+TGG 0.563760 4.1:-7238925 None:intergenic
GGTGGAAAGGCTCCGAACCT+AGG 0.563950 4.1:+7241108 MS.gene70123:CDS
ATTTGTGATGCTGATAGAGA+TGG 0.565356 4.1:+7238961 MS.gene70123:CDS
CATGTCTGGGGCCATAGACA+TGG 0.566057 4.1:+7238669 None:intergenic
ATGGATCCAAGAGGGACCCC+GGG 0.571593 4.1:+7241149 MS.gene70123:CDS
ATATATATCAACATTGGGAG+AGG 0.571984 4.1:+7240635 MS.gene70123:CDS
AAGGCCTCTATAGAAAGCCC+GGG 0.573250 4.1:-7241166 None:intergenic
CCGACCACCGATCACGGCCG+TGG 0.575645 4.1:+7238736 MS.gene70123:CDS
ACCTGAATATAAATATGCTA+AGG 0.576019 4.1:+7238927 MS.gene70123:CDS
GTGGTCTTACAAATTCAGAC+TGG 0.577576 4.1:+7240799 MS.gene70123:CDS
CTCTAGTACAACTTGGATGT+GGG 0.578834 4.1:+7241424 MS.gene70123:CDS
AGGGTATGCCTTGTAGACAT+TGG 0.583161 4.1:+7240655 MS.gene70123:CDS
GCATCAGCAAGCATGTGCAC+AGG 0.584381 4.1:+7240701 MS.gene70123:CDS
AATGTAATTGGAGATAGTCA+AGG 0.585996 4.1:+7240961 MS.gene70123:CDS
TGGAAAACCCTTAAGGACGA+AGG 0.588718 4.1:+7242093 MS.gene70123:CDS
CTTGTACGAATAACCTGCAG+TGG 0.590465 4.1:-7241483 None:intergenic
TAATGGGTTGAATGTTGTGA+AGG 0.593361 4.1:+7240891 MS.gene70123:CDS
TTAAGGACGAAGGCTTTCGA+GGG 0.595236 4.1:+7242103 MS.gene70123:CDS
ACTTTGGGATGCTCTTGTCA+AGG 0.602469 4.1:+7239095 MS.gene70123:CDS
ATGTAATTGGAGATAGTCAA+GGG 0.608848 4.1:+7240962 MS.gene70123:CDS
ACCACCTTTAGACGATCAAG+AGG 0.609465 4.1:-7240781 None:intergenic
TTTACCACGGCCGTGATCGG+TGG 0.612531 4.1:-7238740 None:intergenic
ATTATGCTCACATTGAAGCA+GGG 0.615028 4.1:+7238884 MS.gene70123:CDS
TAAGCACTAGAAGTGTTGGT+AGG 0.615335 4.1:-7242048 None:intergenic
TTTGTGATGCTGATAGAGAT+GGG 0.615874 4.1:+7238962 MS.gene70123:CDS
ATGTGCGTCTGAAGGTGGAA+AGG 0.616080 4.1:+7241095 MS.gene70123:CDS
GAACAAGCTGTCATTCCTGA+AGG 0.618005 4.1:+7240679 MS.gene70123:CDS
GGCTTTCGAGGGTTCTACAA+GGG 0.618467 4.1:+7242114 MS.gene70123:CDS
TATATATCAACATTGGGAGA+GGG 0.618834 4.1:+7240636 MS.gene70123:CDS
GGCCATAGACATGGACCACG+TGG 0.619134 4.1:+7238678 MS.gene70123:CDS
TTACAGACATGTGCGTCTGA+AGG 0.627961 4.1:+7241087 MS.gene70123:CDS
CAACATTCAACCCATTACCT+CGG 0.628881 4.1:-7240885 None:intergenic
ATGTAAGTAATACTTGCAGC+CGG 0.630205 4.1:-7242165 None:intergenic
TCCTCTTGATCGTCTAAAGG+TGG 0.632322 4.1:+7240780 MS.gene70123:CDS
CCACGGCCGTGATCGGTGGT+CGG 0.632763 4.1:-7238736 None:intergenic
CCACATCCAAGTTGTACTAG+AGG 0.639833 4.1:-7241423 None:intergenic
ATAGATAGCAATCTGTGCAA+TGG 0.645374 4.1:-7241040 None:intergenic
TCGGTGGTCGGAGAAGTCGC+CGG 0.645691 4.1:-7238724 None:intergenic
CTTACAAATTCAGACTGGAA+AGG 0.645930 4.1:+7240804 MS.gene70123:CDS
AAGGATATATGGATCCAAGA+GGG 0.650322 4.1:+7241141 MS.gene70123:CDS
TACCAAGAAGAGATGGAACA+AGG 0.652820 4.1:-7241185 None:intergenic
AACACTTCTAGTGCTTACAA+GGG 0.655900 4.1:+7242054 MS.gene70123:CDS
AAATATATTATATCTGACCA+TGG 0.657158 4.1:+7241267 MS.gene70123:CDS
ATGAAGATATGGCAACGAGA+CGG 0.675716 4.1:+7240847 MS.gene70123:CDS
TGCAGGGATTGAAATTGATG+AGG 0.683016 4.1:+7240501 MS.gene70123:intron
GCCATAGACATGGACCACGT+GGG 0.686014 4.1:+7238679 MS.gene70123:CDS
AAAGGATATATGGATCCAAG+AGG 0.690784 4.1:+7241140 MS.gene70123:CDS
GAACCTAGGAACCCTTACAA+AGG 0.697269 4.1:+7241122 MS.gene70123:CDS
CAGCATAAAACACATGTCTG+GGG 0.712096 4.1:+7238657 None:intergenic
AGGCCTCTATAGAAAGCCCG+GGG 0.730497 4.1:-7241165 None:intergenic
TGGGTTTGGAGAAACCCACG+TGG 0.761132 4.1:-7238693 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTTATCAATAAGAATATA+AGG - chr4.1:7241347-7241366 None:intergenic 10.0%
!!! TAAAAGGTTAAATTTTATTT+TGG - chr4.1:7241963-7241982 None:intergenic 10.0%
!!! TACATATTTTATAACAAATA+GGG + chr4.1:7239337-7239356 MS.gene70123:intron 10.0%
!! ATATATATGAGTTATAACTA+TGG - chr4.1:7240096-7240115 None:intergenic 15.0%
!! TACATTGTATAAATTCTAAA+AGG - chr4.1:7241979-7241998 None:intergenic 15.0%
!! TGAAAATATATATCAACATT+GGG + chr4.1:7240630-7240649 MS.gene70123:CDS 15.0%
!! TTAATAAAAACAAGAGAAAA+CGG - chr4.1:7239902-7239921 None:intergenic 15.0%
!! TTGAAAATATATATCAACAT+TGG + chr4.1:7240629-7240648 MS.gene70123:CDS 15.0%
!!! AATGTTGATATATATTTTCA+AGG - chr4.1:7240630-7240649 None:intergenic 15.0%
!!! ATGTTGATATATATTTTCAA+GGG - chr4.1:7240629-7240648 None:intergenic 15.0%
!!! CCATTTTTTAAAATTATAAC+CGG - chr4.1:7239226-7239245 None:intergenic 15.0%
!!! CTACATATTTTATAACAAAT+AGG + chr4.1:7239336-7239355 MS.gene70123:intron 15.0%
!! AAATATATTATATCTGACCA+TGG + chr4.1:7241267-7241286 MS.gene70123:CDS 20.0%
!! AACATACTAACATCAAAAAA+AGG - chr4.1:7239475-7239494 None:intergenic 20.0%
!! AATAACTCTATGAATTTGTA+TGG + chr4.1:7240246-7240265 MS.gene70123:intron 20.0%
!! ATTTATATACTAGGTCTTTA+AGG + chr4.1:7240390-7240409 MS.gene70123:intron 20.0%
!! GCTATAGTAAACATTAATAT+TGG + chr4.1:7239404-7239423 MS.gene70123:intron 20.0%
!! GCTTATAGAAAAAATTTCAA+AGG + chr4.1:7240214-7240233 MS.gene70123:intron 20.0%
!! GGCATTATTATTTATATACT+AGG + chr4.1:7240381-7240400 MS.gene70123:intron 20.0%
!! GTCAGATATAATATATTTCT+TGG - chr4.1:7241265-7241284 None:intergenic 20.0%
!! TAGTAAACATTAATATTGGT+TGG + chr4.1:7239408-7239427 MS.gene70123:intron 20.0%
!!! AGTAAACATTAATATTGGTT+GGG + chr4.1:7239409-7239428 MS.gene70123:intron 20.0%
!!! ATATGTCCTTTAGTTATTTT+AGG + chr4.1:7241629-7241648 MS.gene70123:intron 20.0%
!!! ATATTTTATAACAAATAGGG+AGG + chr4.1:7239340-7239359 MS.gene70123:intron 20.0%
!!! CCGGTTATAATTTTAAAAAA+TGG + chr4.1:7239223-7239242 MS.gene70123:intron 20.0%
!!! TTGATTATCATGATTTTAGA+CGG + chr4.1:7238989-7239008 MS.gene70123:CDS 20.0%
! AAAAAAAACTTAAGGACCAA+AGG - chr4.1:7241659-7241678 None:intergenic 25.0%
! AAAAAAACTTAAGGACCAAA+GGG - chr4.1:7241658-7241677 None:intergenic 25.0%
! AAATGGGAAAATATCTCATA+TGG + chr4.1:7239706-7239725 MS.gene70123:intron 25.0%
! AACTCAATCTCATTTAGAAA+AGG - chr4.1:7239668-7239687 None:intergenic 25.0%
! AAGTGACATAATTAACAAGA+GGG - chr4.1:7239138-7239157 None:intergenic 25.0%
! AATCTGTAACATTTGTAACT+TGG + chr4.1:7241875-7241894 MS.gene70123:intron 25.0%
! AATGGAACGAAAAAAACTTA+AGG + chr4.1:7241904-7241923 MS.gene70123:intron 25.0%
! ACAATGAGAAAATGAAACAA+GGG - chr4.1:7240448-7240467 None:intergenic 25.0%
! ACCTGAATATAAATATGCTA+AGG + chr4.1:7238927-7238946 MS.gene70123:CDS 25.0%
! AGTGGAACAAAAAAAACTTA+AGG - chr4.1:7241667-7241686 None:intergenic 25.0%
! ATCTGTAACATTTGTAACTT+GGG + chr4.1:7241876-7241895 MS.gene70123:intron 25.0%
! ATGGAACGAAAAAAACTTAA+GGG + chr4.1:7241905-7241924 MS.gene70123:intron 25.0%
! CAAATGAAAAACTGAAAGAA+AGG + chr4.1:7241847-7241866 MS.gene70123:intron 25.0%
! GAAATGCTGAAAAATGTAAT+TGG + chr4.1:7240949-7240968 MS.gene70123:CDS 25.0%
! GTCTAACATTCGTAAATTAA+GGG - chr4.1:7241695-7241714 None:intergenic 25.0%
! TAAGTGACATAATTAACAAG+AGG - chr4.1:7239139-7239158 None:intergenic 25.0%
! TACAATGAGAAAATGAAACA+AGG - chr4.1:7240449-7240468 None:intergenic 25.0%
! TCCTTAGCATATTTATATTC+AGG - chr4.1:7238931-7238950 None:intergenic 25.0%
! TGTCTAACATTCGTAAATTA+AGG - chr4.1:7241696-7241715 None:intergenic 25.0%
! TTAGCATATTTATATTCAGG+TGG - chr4.1:7238928-7238947 None:intergenic 25.0%
! TTCATAAGCATAAAACTTGA+TGG - chr4.1:7240932-7240951 None:intergenic 25.0%
! TTTCTTGGATATATCTTTCA+AGG - chr4.1:7241250-7241269 None:intergenic 25.0%
!! AAGAAGAAAAGAGCATAAAA+AGG - chr4.1:7241390-7241409 None:intergenic 25.0%
!! AGATATTTTCCCATTTTAGA+AGG - chr4.1:7239702-7239721 None:intergenic 25.0%
!! CATGTTGATAAGGATAATAA+TGG + chr4.1:7240547-7240566 MS.gene70123:CDS 25.0%
!! GTAAACATTAATATTGGTTG+GGG + chr4.1:7239410-7239429 MS.gene70123:intron 25.0%
!! TAAACATTAATATTGGTTGG+GGG + chr4.1:7239411-7239430 MS.gene70123:intron 25.0%
!! TTTACGAATGTTAGACATTT+TGG + chr4.1:7241699-7241718 MS.gene70123:intron 25.0%
!! TTTTGATGTTAGTATGTTGT+TGG + chr4.1:7239477-7239496 MS.gene70123:intron 25.0%
!!! AAGTTTTTTTCGTTCCATTT+TGG - chr4.1:7241903-7241922 None:intergenic 25.0%
!!! AAGTTTTTTTTGTTCCACTT+TGG + chr4.1:7241668-7241687 MS.gene70123:intron 25.0%
!!! CTTGATAGCTAGTTTTATAA+TGG + chr4.1:7241593-7241612 MS.gene70123:intron 25.0%
!!! GAATTATCACTTTTGAAGAA+TGG + chr4.1:7240569-7240588 MS.gene70123:CDS 25.0%
AAAAAGGAATAAGCATGCAA+TGG - chr4.1:7239459-7239478 None:intergenic 30.0%
AAAAGAAACATGCATTCACA+AGG - chr4.1:7240180-7240199 None:intergenic 30.0%
AAACAAGAGAAAACGGATAT+AGG - chr4.1:7239895-7239914 None:intergenic 30.0%
AAGAAGGAAACACAAGAAAT+GGG + chr4.1:7241809-7241828 MS.gene70123:intron 30.0%
AATGAGATTGAGTTTCACAA+AGG + chr4.1:7239674-7239693 MS.gene70123:intron 30.0%
AATGTAATTGGAGATAGTCA+AGG + chr4.1:7240961-7240980 MS.gene70123:CDS 30.0%
AATTGAAACAGTGATCCAAT+CGG + chr4.1:7239817-7239836 MS.gene70123:intron 30.0%
ACATGAGTTTCTCATCTTAT+GGG - chr4.1:7239782-7239801 None:intergenic 30.0%
AGTGACATAATTAACAAGAG+GGG - chr4.1:7239137-7239156 None:intergenic 30.0%
ATATATATCAACATTGGGAG+AGG + chr4.1:7240635-7240654 MS.gene70123:CDS 30.0%
ATCAAAGATTGAAGTCGAAT+CGG - chr4.1:7240298-7240317 None:intergenic 30.0%
ATGATCCATTGAAATTGAAC+CGG - chr4.1:7238770-7238789 None:intergenic 30.0%
ATGGAAAAATCTTCCACAAA+AGG - chr4.1:7240424-7240443 None:intergenic 30.0%
ATGTAATTGGAGATAGTCAA+GGG + chr4.1:7240962-7240981 MS.gene70123:CDS 30.0%
CAAAAGCAAATAATGAGTGT+GGG + chr4.1:7241553-7241572 MS.gene70123:intron 30.0%
CATTGGATCTTATCAAAACT+AGG + chr4.1:7241064-7241083 MS.gene70123:CDS 30.0%
CCAGAGAAAAACATTACTTA+TGG - chr4.1:7241522-7241541 None:intergenic 30.0%
GATCCATATATCCTTTGTAA+GGG - chr4.1:7241136-7241155 None:intergenic 30.0%
GCTATTGATGTTGAACATAA+TGG + chr4.1:7239054-7239073 MS.gene70123:CDS 30.0%
GGGAAACCTAAAATAACTAA+AGG - chr4.1:7241638-7241657 None:intergenic 30.0%
GTACGAAACAATACAACAAT+CGG + chr4.1:7239748-7239767 MS.gene70123:intron 30.0%
TAAAACCTGAAAACAACTCA+AGG + chr4.1:7241935-7241954 MS.gene70123:intron 30.0%
TAAGTTAAAGAGATCAAGAG+TGG - chr4.1:7241306-7241325 None:intergenic 30.0%
TACATGAGTTTCTCATCTTA+TGG - chr4.1:7239783-7239802 None:intergenic 30.0%
TATATATCAACATTGGGAGA+GGG + chr4.1:7240636-7240655 MS.gene70123:CDS 30.0%
TATGAATTTGTATGGTGTGT+GGG + chr4.1:7240254-7240273 MS.gene70123:intron 30.0%
TATTCTTCCTGAAGAACTTT+GGG + chr4.1:7239080-7239099 MS.gene70123:CDS 30.0%
TCTTTGATGCTACTAACAAA+GGG + chr4.1:7238854-7238873 MS.gene70123:CDS 30.0%
TGGAAAAATCTTCCACAAAA+GGG - chr4.1:7240423-7240442 None:intergenic 30.0%
TTCAATGGATCATGTTCTAT+TGG + chr4.1:7238777-7238796 MS.gene70123:CDS 30.0%
TTCTTTGATGCTACTAACAA+AGG + chr4.1:7238853-7238872 MS.gene70123:CDS 30.0%
TTGAAAATCGGTCAAAACTT+TGG - chr4.1:7240004-7240023 None:intergenic 30.0%
! AAACATTAATATTGGTTGGG+GGG + chr4.1:7239412-7239431 MS.gene70123:intron 30.0%
! CCATAAGTAATGTTTTTCTC+TGG + chr4.1:7241519-7241538 MS.gene70123:intron 30.0%
! TATATACTAGGTCTTTAAGG+TGG + chr4.1:7240393-7240412 MS.gene70123:intron 30.0%
! TCATGATTTTAGACGGTATA+TGG + chr4.1:7238996-7239015 MS.gene70123:CDS 30.0%
!! ACAAAGGTTCCTTCTAAAAT+GGG + chr4.1:7239690-7239709 MS.gene70123:intron 30.0%
!! ACACTCATTATTTGCTTTTG+GGG - chr4.1:7241553-7241572 None:intergenic 30.0%
!! CACACTCATTATTTGCTTTT+GGG - chr4.1:7241554-7241573 None:intergenic 30.0%
!!! AGTTATTTTAGGTTTCCCTT+TGG + chr4.1:7241640-7241659 MS.gene70123:intron 30.0%
!!! CTAGTTTTGATAAGATCCAA+TGG - chr4.1:7241066-7241085 None:intergenic 30.0%
!!! GTTGTTTTCAGGTTTTACTT+TGG - chr4.1:7241932-7241951 None:intergenic 30.0%
!!! TGTTTTTTGGAAAACCCTTA+AGG + chr4.1:7242086-7242105 MS.gene70123:CDS 30.0%
!!! TTCCTTGTTTTTTACTGAAC+CGG - chr4.1:7239845-7239864 None:intergenic 30.0%
AAAACCCGGTTCAATTTCAA+TGG + chr4.1:7238762-7238781 MS.gene70123:CDS 35.0%
AAAGGATATATGGATCCAAG+AGG + chr4.1:7241140-7241159 MS.gene70123:CDS 35.0%
AACACTTCTAGTGCTTACAA+GGG + chr4.1:7242054-7242073 MS.gene70123:CDS 35.0%
AAGAAAGGGATGTTCGTATT+CGG + chr4.1:7238818-7238837 MS.gene70123:CDS 35.0%
AAGGATATATGGATCCAAGA+GGG + chr4.1:7241141-7241160 MS.gene70123:CDS 35.0%
AATCTAAGTTTCTTCGAGCA+AGG - chr4.1:7239610-7239629 None:intergenic 35.0%
ACAGATTGCTATCTATCCAT+TGG + chr4.1:7241047-7241066 MS.gene70123:CDS 35.0%
ACTTGCTTACTTTATCGTGT+GGG + chr4.1:7240346-7240365 MS.gene70123:intron 35.0%
ATAGATAGCAATCTGTGCAA+TGG - chr4.1:7241043-7241062 None:intergenic 35.0%
ATGTAAGTAATACTTGCAGC+CGG - chr4.1:7242168-7242187 None:intergenic 35.0%
ATTATGCTCACATTGAAGCA+GGG + chr4.1:7238884-7238903 MS.gene70123:CDS 35.0%
ATTTGAGTCCGTCAAATGTT+TGG + chr4.1:7241743-7241762 MS.gene70123:intron 35.0%
ATTTGTGATGCTGATAGAGA+TGG + chr4.1:7238961-7238980 MS.gene70123:CDS 35.0%
CATGAGTTTCTCATCTTATG+GGG - chr4.1:7239781-7239800 None:intergenic 35.0%
CCAAAAGCAAATAATGAGTG+TGG + chr4.1:7241552-7241571 MS.gene70123:intron 35.0%
CTATGAATTTGTATGGTGTG+TGG + chr4.1:7240253-7240272 MS.gene70123:intron 35.0%
CTGGATCAATGCTTGAAAAT+CGG - chr4.1:7240016-7240035 None:intergenic 35.0%
CTTACAAATTCAGACTGGAA+AGG + chr4.1:7240804-7240823 MS.gene70123:CDS 35.0%
CTTTGTTGAGCATGTTGATA+AGG + chr4.1:7240537-7240556 MS.gene70123:CDS 35.0%
GAACCCTTACAAAGGATATA+TGG + chr4.1:7241130-7241149 MS.gene70123:CDS 35.0%
GAAGAAGGAAACACAAGAAA+TGG + chr4.1:7241808-7241827 MS.gene70123:intron 35.0%
GAGAAAATGAAACAAGGGAA+TGG - chr4.1:7240443-7240462 None:intergenic 35.0%
GATTCGACTTCAATCTTTGA+TGG + chr4.1:7240297-7240316 MS.gene70123:intron 35.0%
GCTTATTTGTGTCAAAGATG+CGG - chr4.1:7240041-7240060 None:intergenic 35.0%
GGATCCATATATCCTTTGTA+AGG - chr4.1:7241137-7241156 None:intergenic 35.0%
GTATTCTTCCTGAAGAACTT+TGG + chr4.1:7239079-7239098 MS.gene70123:CDS 35.0%
GTGACATAATTAACAAGAGG+GGG - chr4.1:7239136-7239155 None:intergenic 35.0%
GTGGCAAAAATATCATACCA+TGG - chr4.1:7241287-7241306 None:intergenic 35.0%
TAATGAGTGTGGGATGATAT+CGG + chr4.1:7241563-7241582 MS.gene70123:intron 35.0%
TACTTGCTTACTTTATCGTG+TGG + chr4.1:7240345-7240364 MS.gene70123:intron 35.0%
TCTGTAGTCATTCATAGCTT+TGG + chr4.1:7240150-7240169 MS.gene70123:intron 35.0%
TGATCCATTGAAATTGAACC+GGG - chr4.1:7238769-7238788 None:intergenic 35.0%
TGGGAAAATATCTCATATGG+TGG + chr4.1:7239709-7239728 MS.gene70123:intron 35.0%
TTGTAGTGCCAAACATTTGA+CGG - chr4.1:7241754-7241773 None:intergenic 35.0%
TTTGTAACTTGGGACCAAAA+TGG + chr4.1:7241886-7241905 MS.gene70123:intron 35.0%
TTTGTGATGCTGATAGAGAT+GGG + chr4.1:7238962-7238981 MS.gene70123:CDS 35.0%
! AGCAGATATTTTATTGCAGG+GGG + chr4.1:7240724-7240743 MS.gene70123:CDS 35.0%
! AGGAGCAGATATTTTATTGC+AGG + chr4.1:7240721-7240740 MS.gene70123:CDS 35.0%
! CACAAAGGTTCCTTCTAAAA+TGG + chr4.1:7239689-7239708 MS.gene70123:intron 35.0%
! CCACACTCATTATTTGCTTT+TGG - chr4.1:7241555-7241574 None:intergenic 35.0%
! CTTTTCTTCTTCATAGAACC+TGG + chr4.1:7241399-7241418 MS.gene70123:intron 35.0%
! GAGCAGATATTTTATTGCAG+GGG + chr4.1:7240723-7240742 MS.gene70123:CDS 35.0%
! GGAGCAGATATTTTATTGCA+GGG + chr4.1:7240722-7240741 MS.gene70123:CDS 35.0%
! GTGAATGCATGTTTCTTTTG+AGG + chr4.1:7240181-7240200 MS.gene70123:intron 35.0%
! GTTAGTATGTTGTTGGTTGT+TGG + chr4.1:7239484-7239503 MS.gene70123:intron 35.0%
!! ACATTTGACGGACTCAAATA+TGG - chr4.1:7241742-7241761 None:intergenic 35.0%
!! GGCACTACAATTTGTTGATT+AGG + chr4.1:7241764-7241783 MS.gene70123:intron 35.0%
!! TAATGGGTTGAATGTTGTGA+AGG + chr4.1:7240891-7240910 MS.gene70123:CDS 35.0%
!! TGCTACTAACAAAGGGTATT+TGG + chr4.1:7238861-7238880 MS.gene70123:CDS 35.0%
!!! AGGGAATGTCTGATGTTTTT+TGG + chr4.1:7242073-7242092 MS.gene70123:CDS 35.0%
!!! CTTGTTACTTTTCCTTGAGT+GGG + chr4.1:7239507-7239526 MS.gene70123:intron 35.0%
AAATCTCCTCAAAGTTGTGC+CGG + chr4.1:7242146-7242165 MS.gene70123:CDS 40.0%
AACATTTCTTGTCCCACTCA+AGG - chr4.1:7239522-7239541 None:intergenic 40.0%
AAGTCAGATATTGGTACTGC+CGG + chr4.1:7240988-7241007 MS.gene70123:CDS 40.0%
ACATGTGTCCATGTCTATCA+CGG - chr4.1:7239279-7239298 None:intergenic 40.0%
ACTTGCATTGCCTATGATTG+TGG + chr4.1:7239569-7239588 MS.gene70123:intron 40.0%
ATGAAGATATGGCAACGAGA+CGG + chr4.1:7240847-7240866 MS.gene70123:CDS 40.0%
ATTACATTGCCATGCTTCTC+AGG + chr4.1:7242013-7242032 MS.gene70123:intron 40.0%
CAACACTTCTAGTGCTTACA+AGG + chr4.1:7242053-7242072 MS.gene70123:CDS 40.0%
CAACATTCAACCCATTACCT+CGG - chr4.1:7240888-7240907 None:intergenic 40.0%
CAAGGGAACAAGTCAGATAT+TGG + chr4.1:7240979-7240998 MS.gene70123:CDS 40.0%
CACCTTCAAGTAGAAGTTCA+TGG - chr4.1:7239965-7239984 None:intergenic 40.0%
CATGAACTTCTACTTGAAGG+TGG + chr4.1:7239963-7239982 MS.gene70123:intron 40.0%
CGTAAATTAAGGGACCAAAG+TGG - chr4.1:7241685-7241704 None:intergenic 40.0%
CTCTAGTACAACTTGGATGT+GGG + chr4.1:7241424-7241443 MS.gene70123:CDS 40.0%
CTTCATTACTGCTGGCATAA+TGG - chr4.1:7240833-7240852 None:intergenic 40.0%
CTTGGTATGATTCCTTATGC+AGG + chr4.1:7241201-7241220 MS.gene70123:CDS 40.0%
CTTGTTCTCCAATGTCTACA+AGG - chr4.1:7240666-7240685 None:intergenic 40.0%
GACCATGAACTTCTACTTGA+AGG + chr4.1:7239960-7239979 MS.gene70123:intron 40.0%
GATTATGCTCACATTGAAGC+AGG + chr4.1:7238883-7238902 MS.gene70123:CDS 40.0%
GGAATCATACCAAGAAGAGA+TGG - chr4.1:7241195-7241214 None:intergenic 40.0%
GGCTGCAAGTATTACTTACA+TGG + chr4.1:7242167-7242186 MS.gene70123:CDS 40.0%
TACCAAGAAGAGATGGAACA+AGG - chr4.1:7241188-7241207 None:intergenic 40.0%
TATCCTTTGTAAGGGTTCCT+AGG - chr4.1:7241128-7241147 None:intergenic 40.0%
TCCTTCTTCTTCTTCTTGCT+GGG - chr4.1:7241797-7241816 None:intergenic 40.0%
TCGACTTCAATCTTTGATGG+TGG + chr4.1:7240300-7240319 MS.gene70123:intron 40.0%
TCGTGTGGGATAATATGTTC+AGG + chr4.1:7240360-7240379 MS.gene70123:intron 40.0%
TGCAGGGATTGAAATTGATG+AGG + chr4.1:7240501-7240520 MS.gene70123:intron 40.0%
TGCCAGCAGTAATGAAGATA+TGG + chr4.1:7240836-7240855 MS.gene70123:CDS 40.0%
TGCCATATCTTCATTACTGC+TGG - chr4.1:7240841-7240860 None:intergenic 40.0%
TTCCTTCTTCTTCTTCTTGC+TGG - chr4.1:7241798-7241817 None:intergenic 40.0%
TTTGTAAGGGTTCCTAGGTT+CGG - chr4.1:7241123-7241142 None:intergenic 40.0%
! CTTGTAAGCACTAGAAGTGT+TGG - chr4.1:7242055-7242074 None:intergenic 40.0%
! GGTTTATTAGGGTTTTTCCG+AGG + chr4.1:7240868-7240887 MS.gene70123:CDS 40.0%
! GTGGTCTTACAAATTCAGAC+TGG + chr4.1:7240799-7240818 MS.gene70123:CDS 40.0%
! TAAGGTGGTATTCCCTTTTG+TGG + chr4.1:7240408-7240427 MS.gene70123:intron 40.0%
! TAGGGTTTTTCCGAGGTAAT+GGG + chr4.1:7240875-7240894 MS.gene70123:CDS 40.0%
! TTAGGGTTTTTCCGAGGTAA+TGG + chr4.1:7240874-7240893 MS.gene70123:CDS 40.0%
!! TAAGCACTAGAAGTGTTGGT+AGG - chr4.1:7242051-7242070 None:intergenic 40.0%
!! TCATATGGTGGATTGATGCT+TGG + chr4.1:7239721-7239740 MS.gene70123:intron 40.0%
!! TGCCGGTTCAGTAAAAAACA+AGG + chr4.1:7239840-7239859 MS.gene70123:intron 40.0%
!! TGGATCCTTGAGTTGTTTTC+AGG - chr4.1:7241943-7241962 None:intergenic 40.0%
!!! GCTTGTTACTTTTCCTTGAG+TGG + chr4.1:7239506-7239525 MS.gene70123:intron 40.0%
!!! TTGAACCGGGTTTTTTACCA+CGG - chr4.1:7238756-7238775 None:intergenic 40.0%
AAGTCACTGCCTCTTCTGTA+CGG + chr4.1:7239938-7239957 MS.gene70123:intron 45.0%
ACCACCTTTAGACGATCAAG+AGG - chr4.1:7240784-7240803 None:intergenic 45.0%
ACCCAGCAAGAAGAAGAAGA+AGG + chr4.1:7241793-7241812 MS.gene70123:intron 45.0%
ACTTGGATGTGGGACAGTTT+CGG + chr4.1:7241434-7241453 MS.gene70123:CDS 45.0%
AGGGTATGCCTTGTAGACAT+TGG + chr4.1:7240655-7240674 MS.gene70123:CDS 45.0%
CAAATGTTGAGAGACTGCAG+AGG + chr4.1:7240126-7240145 MS.gene70123:intron 45.0%
CACTGCAGGTTATTCGTACA+AGG + chr4.1:7241484-7241503 MS.gene70123:CDS 45.0%
CCACATCCAAGTTGTACTAG+AGG - chr4.1:7241426-7241445 None:intergenic 45.0%
CCTCTAGTACAACTTGGATG+TGG + chr4.1:7241423-7241442 MS.gene70123:CDS 45.0%
CTCCAAACCCAAATCATCTC+CGG + chr4.1:7238705-7238724 MS.gene70123:CDS 45.0%
CTTGTACGAATAACCTGCAG+TGG - chr4.1:7241486-7241505 None:intergenic 45.0%
GAACAAGCTGTCATTCCTGA+AGG + chr4.1:7240679-7240698 MS.gene70123:CDS 45.0%
GAACCTAGGAACCCTTACAA+AGG + chr4.1:7241122-7241141 MS.gene70123:CDS 45.0%
GACCTATGAAGCTCATACAC+CGG + chr4.1:7239184-7239203 MS.gene70123:intron 45.0%
GCGTGAGACTAAGGAAGAAA+GGG + chr4.1:7238804-7238823 MS.gene70123:CDS 45.0%
GGCAACGAGACGGTTTATTA+GGG + chr4.1:7240857-7240876 MS.gene70123:CDS 45.0%
GTGAGATCAATGCCTGCATA+AGG - chr4.1:7241216-7241235 None:intergenic 45.0%
GTTACAGCAGCCACAATCAT+AGG - chr4.1:7239582-7239601 None:intergenic 45.0%
GTTTCTCATCTTATGGGGAG+AGG - chr4.1:7239776-7239795 None:intergenic 45.0%
TACTTGTGTCTATCCACTGC+AGG + chr4.1:7241470-7241489 MS.gene70123:CDS 45.0%
TCCTCTTGATCGTCTAAAGG+TGG + chr4.1:7240780-7240799 MS.gene70123:CDS 45.0%
TCGAAAGCCTTCGTCCTTAA+GGG - chr4.1:7242103-7242122 None:intergenic 45.0%
TGCGTGAGACTAAGGAAGAA+AGG + chr4.1:7238803-7238822 MS.gene70123:CDS 45.0%
TGCTCCTCTTGATCGTCTAA+AGG + chr4.1:7240777-7240796 MS.gene70123:CDS 45.0%
TGGAAAACCCTTAAGGACGA+AGG + chr4.1:7242093-7242112 MS.gene70123:CDS 45.0%
TGGCAACGAGACGGTTTATT+AGG + chr4.1:7240856-7240875 MS.gene70123:CDS 45.0%
TTAAGGACGAAGGCTTTCGA+GGG + chr4.1:7242103-7242122 MS.gene70123:CDS 45.0%
TTACAGACATGTGCGTCTGA+AGG + chr4.1:7241087-7241106 MS.gene70123:CDS 45.0%
TTTATTGCAGGGGGAATAGC+AGG + chr4.1:7240733-7240752 MS.gene70123:CDS 45.0%
! AAGACTTTTTGCAGGTGGCA+TGG + chr4.1:7241011-7241030 MS.gene70123:CDS 45.0%
! AGAGCATCCCAAAGTTCTTC+AGG - chr4.1:7239090-7239109 None:intergenic 45.0%
! CATTAATATTGGTTGGGGGG+TGG + chr4.1:7239415-7239434 MS.gene70123:intron 45.0%
! CTTCTGATTGAAGGCGTGTT+TGG - chr4.1:7239308-7239327 None:intergenic 45.0%
! GGCACAACTTTGAGGAGATT+TGG - chr4.1:7242147-7242166 None:intergenic 45.0%
! TTGAAGGTGGTGACGTTGAT+CGG + chr4.1:7239976-7239995 MS.gene70123:intron 45.0%
!! ACTTTGGGATGCTCTTGTCA+AGG + chr4.1:7239095-7239114 MS.gene70123:CDS 45.0%
!! ATTGGCTTTGCGTGAGACTA+AGG + chr4.1:7238795-7238814 MS.gene70123:CDS 45.0%
!! TAAAACTTGATGGCGCTCTC+AGG - chr4.1:7240922-7240941 None:intergenic 45.0%
!! TTTTCAAGGGTTGCTTCGTG+AGG - chr4.1:7240616-7240635 None:intergenic 45.0%
!!! TTTTTTACCACGGCCGTGAT+CGG - chr4.1:7238746-7238765 None:intergenic 45.0%
AACAGTGATCCAATCGGTGC+CGG + chr4.1:7239823-7239842 MS.gene70123:intron 50.0%
AAGGCCTCTATAGAAAGCCC+GGG - chr4.1:7241169-7241188 None:intergenic 50.0%
AATATGGAGACCAGGCAGGA+AGG - chr4.1:7241726-7241745 None:intergenic 50.0%
AATCCCTGCAGCATCAAAGC+TGG - chr4.1:7240491-7240510 None:intergenic 50.0%
AGAAGTCGCCGGAGATGATT+TGG - chr4.1:7238716-7238735 None:intergenic 50.0%
AGGCTTTCGAGGGTTCTACA+AGG + chr4.1:7242113-7242132 MS.gene70123:CDS 50.0%
ATGTGCGTCTGAAGGTGGAA+AGG + chr4.1:7241095-7241114 MS.gene70123:CDS 50.0%
CAAGGCCTCTATAGAAAGCC+CGG - chr4.1:7241170-7241189 None:intergenic 50.0%
CCAAGTTGTACTAGAGGACC+AGG - chr4.1:7241420-7241439 None:intergenic 50.0%
CCTGGTCCTCTAGTACAACT+TGG + chr4.1:7241417-7241436 MS.gene70123:CDS 50.0%
CGGACTCAAATATGGAGACC+AGG - chr4.1:7241734-7241753 None:intergenic 50.0%
CTAGAAATGCGCTGCTTGAG+AGG + chr4.1:7240060-7240079 MS.gene70123:intron 50.0%
CTCAAATATGGAGACCAGGC+AGG - chr4.1:7241730-7241749 None:intergenic 50.0%
CTCGAAAGCCTTCGTCCTTA+AGG - chr4.1:7242104-7242123 None:intergenic 50.0%
CTTAAGGACGAAGGCTTTCG+AGG + chr4.1:7242102-7242121 MS.gene70123:CDS 50.0%
CTTCTTCTTCTTGCTGGGTG+AGG - chr4.1:7241792-7241811 None:intergenic 50.0%
CTTGGATGTGGGACAGTTTC+GGG + chr4.1:7241435-7241454 MS.gene70123:CDS 50.0%
GAAGTCGCCGGAGATGATTT+GGG - chr4.1:7238715-7238734 None:intergenic 50.0%
GCCACCTGCAAAAAGTCTTC+CGG - chr4.1:7241010-7241029 None:intergenic 50.0%
GGCTTTCGAGGGTTCTACAA+GGG + chr4.1:7242114-7242133 MS.gene70123:CDS 50.0%
GTCACTGTCCGTGATAGACA+TGG + chr4.1:7239268-7239287 MS.gene70123:intron 50.0%
GTCCGGTGTATGAGCTTCAT+AGG - chr4.1:7239189-7239208 None:intergenic 50.0%
GTTCATGGTCCGTACAGAAG+AGG - chr4.1:7239950-7239969 None:intergenic 50.0%
! AAAGCCAGCTTTGATGCTGC+AGG + chr4.1:7240484-7240503 MS.gene70123:intron 50.0%
! AAGCCAGCTTTGATGCTGCA+GGG + chr4.1:7240485-7240504 MS.gene70123:intron 50.0%
! ACATGCTTGCTGATGCCTTC+AGG - chr4.1:7240697-7240716 None:intergenic 50.0%
! ACTGCCGGAAGACTTTTTGC+AGG + chr4.1:7241003-7241022 MS.gene70123:CDS 50.0%
! GCGCTGACACTTCTGATTGA+AGG - chr4.1:7239317-7239336 None:intergenic 50.0%
! TGCAGCATCAAAGCTGGCTT+TGG - chr4.1:7240485-7240504 None:intergenic 50.0%
!! ACATTTTGGTCCTTCCTGCC+TGG + chr4.1:7241713-7241732 MS.gene70123:intron 50.0%
!! GGCCTTGTTCCATCTCTTCT+TGG + chr4.1:7241183-7241202 MS.gene70123:CDS 50.0%
!! TTTACTGAACCGGCACCGAT+TGG - chr4.1:7239835-7239854 None:intergenic 50.0%
ACCCACGTGGTCCATGTCTA+TGG - chr4.1:7238683-7238702 None:intergenic 55.0%
ACTTCTCCGACCACCGATCA+CGG + chr4.1:7238730-7238749 MS.gene70123:CDS 55.0%
AGGCCTCTATAGAAAGCCCG+GGG - chr4.1:7241168-7241187 None:intergenic 55.0%
ATCGGCCTTCACAAGTCCCA+CGG - chr4.1:7240280-7240299 None:intergenic 55.0%
CACGGCCGTGGTAAAAAACC+CGG + chr4.1:7238748-7238767 MS.gene70123:CDS 55.0%
CAGACATGTGCGTCTGAAGG+TGG + chr4.1:7241090-7241109 MS.gene70123:CDS 55.0%
GCATCAGCAAGCATGTGCAC+AGG + chr4.1:7240701-7240720 MS.gene70123:CDS 55.0%
GCCATAGACATGGACCACGT+GGG + chr4.1:7238679-7238698 MS.gene70123:CDS 55.0%
TATGGATCCAAGAGGGACCC+CGG + chr4.1:7241148-7241167 MS.gene70123:CDS 55.0%
TGGGATGCTCTTGTCAAGGC+TGG + chr4.1:7239099-7239118 MS.gene70123:CDS 55.0%
TGGGTTTGGAGAAACCCACG+TGG - chr4.1:7238696-7238715 None:intergenic 55.0%
TTGCAGCCGGCACAACTTTG+AGG - chr4.1:7242155-7242174 None:intergenic 55.0%
TTGTATGGTGTGTGGGCCGT+GGG + chr4.1:7240261-7240280 MS.gene70123:intron 55.0%
TTGTGTCAAAGATGCGGCGC+TGG - chr4.1:7240035-7240054 None:intergenic 55.0%
TTTGTATGGTGTGTGGGCCG+TGG + chr4.1:7240260-7240279 MS.gene70123:intron 55.0%
! CGCCGGAGATGATTTGGGTT+TGG - chr4.1:7238710-7238729 None:intergenic 55.0%
! CTTTTTGCAGGTGGCATGGC+TGG + chr4.1:7241015-7241034 MS.gene70123:CDS 55.0%
! GCCGGAAGACTTTTTGCAGG+TGG + chr4.1:7241006-7241025 MS.gene70123:CDS 55.0%
ATGGATCCAAGAGGGACCCC+GGG + chr4.1:7241149-7241168 MS.gene70123:CDS 60.0%
CGGACACGACACTGACACAC+CGG + chr4.1:7239204-7239223 MS.gene70123:intron 60.0%
CGGTGTGTCAGTGTCGTGTC+CGG - chr4.1:7239206-7239225 None:intergenic 60.0%
GGACCCCGGGCTTTCTATAG+AGG + chr4.1:7241162-7241181 MS.gene70123:CDS 60.0%
GGCCATAGACATGGACCACG+TGG + chr4.1:7238678-7238697 MS.gene70123:CDS 60.0%
GGGACAGTTTCGGGAGCTCT+TGG + chr4.1:7241444-7241463 MS.gene70123:CDS 60.0%
GGTGGAAAGGCTCCGAACCT+AGG + chr4.1:7241108-7241127 MS.gene70123:CDS 60.0%
TGCCATGCTTCTCAGGCTGC+AGG + chr4.1:7242020-7242039 MS.gene70123:intron 60.0%
TTTACCACGGCCGTGATCGG+TGG - chr4.1:7238743-7238762 None:intergenic 60.0%
AGAAAGCCCGGGGTCCCTCT+TGG - chr4.1:7241158-7241177 None:intergenic 65.0%
CGCCTGCAGCCTGAGAAGCA+TGG - chr4.1:7242025-7242044 None:intergenic 65.0%
GTGGGCCGTGGGACTTGTGA+AGG + chr4.1:7240272-7240291 MS.gene70123:intron 65.0%
TCGGTGGTCGGAGAAGTCGC+CGG - chr4.1:7238727-7238746 None:intergenic 65.0%
CCACGGCCGTGATCGGTGGT+CGG - chr4.1:7238739-7238758 None:intergenic 70.0%
CCGACCACCGATCACGGCCG+TGG + chr4.1:7238736-7238755 MS.gene70123:CDS 75.0%


Chromosome Type Strat End Strand Name
chr4.1 gene 7238670 7242227 7238670 ID=MS.gene70123
chr4.1 mRNA 7238670 7242227 7238670 ID=MS.gene70123.t1;Parent=MS.gene70123
chr4.1 exon 7238670 7239120 7238670 ID=MS.gene70123.t1.exon1;Parent=MS.gene70123.t1
chr4.1 CDS 7238670 7239120 7238670 ID=cds.MS.gene70123.t1;Parent=MS.gene70123.t1
chr4.1 exon 7240506 7241288 7240506 ID=MS.gene70123.t1.exon2;Parent=MS.gene70123.t1
chr4.1 CDS 7240506 7241288 7240506 ID=cds.MS.gene70123.t1;Parent=MS.gene70123.t1
chr4.1 exon 7241415 7241505 7241415 ID=MS.gene70123.t1.exon3;Parent=MS.gene70123.t1
chr4.1 CDS 7241415 7241505 7241415 ID=cds.MS.gene70123.t1;Parent=MS.gene70123.t1
chr4.1 exon 7242035 7242227 7242035 ID=MS.gene70123.t1.exon4;Parent=MS.gene70123.t1
chr4.1 CDS 7242035 7242227 7242035 ID=cds.MS.gene70123.t1;Parent=MS.gene70123.t1
Gene Sequence

>MS.gene70123

ATGTCTGGGGCCATAGACATGGACCACGTGGGTTTCTCCAAACCCAAATCATCTCCGGCGACTTCTCCGACCACCGATCACGGCCGTGGTAAAAAACCCGGTTCAATTTCAATGGATCATGTTCTATTGGCTTTGCGTGAGACTAAGGAAGAAAGGGATGTTCGTATTCGGAGTTTATTCAATTTCTTTGATGCTACTAACAAAGGGTATTTGGATTATGCTCACATTGAAGCAGGGTTATCTGCACTTCAGATTCCACCTGAATATAAATATGCTAAGGAGCTTTTTAAGATTTGTGATGCTGATAGAGATGGGAGAATTGATTATCATGATTTTAGACGGTATATGGATGATAAAGAACTTGAACTTTATAGAATTTTTCAAGCTATTGATGTTGAACATAATGGTTGTATTCTTCCTGAAGAACTTTGGGATGCTCTTGTCAAGGCTGGTATTCTTTTAGCCCCCTCTTGTTAATTATGTCACTTACTTTGTTAATTATGTTTTTTCATCTGACCTATGAAGCTCATACACCGGACACGACACTGACACACCGGTTATAATTTTAAAAAATGGCATAATTGAAGTAATCGCATGTGTCACTGTCCGTGATAGACATGGACACATGTCAGACACCAAACACGCCTTCAATCAGAAGTGTCAGCGCTACATATTTTATAACAAATAGGGAGGCTAAGTATAATTATCACTATAGTAAATTTTTTTTTGAACAAGCTATAGTAAACATTAATATTGGTTGGGGGGTGGTATTGCTGTCTCTTTCATCCATTGCATGCTTATTCCTTTTTTTGATGTTAGTATGTTGTTGGTTGTTGGCTTGTTACTTTTCCTTGAGTGGGACAAGAAATGTTGATATTTGATGTTGCTCTTTAACTCAAACTTGCATTGCCTATGATTGTGGCTGCTGTAACTGTAACCTTGCTCGAAGAAACTTAGATTGTAGTTGTATATAAGTATTTGTAGATTCTACGCAACCTTTTCTAAATGAGATTGAGTTTCACAAAGGTTCCTTCTAAAATGGGAAAATATCTCATATGGTGGATTGATGCTTGGATTTGTACGAAACAATACAACAATCGGTGCCTCTCCCCATAAGATGAGAAACTCATGTATTACTTGTACATACAATTGAAACAGTGATCCAATCGGTGCCGGTTCAGTAAAAAACAAGGAAAATGAACAGTAGAGCATCAAAACACAACCTATATCCGTTTTCTCTTGTTTTTATTAAATTAATAACATCGATCAAGTCACTGCCTCTTCTGTACGGACCATGAACTTCTACTTGAAGGTGGTGACGTTGATCGGTGCCAAAGTTTTGACCGATTTTCAAGCATTGATCCAGCGCCGCATCTTTGACACAAATAAGCTAGAAATGCGCTGCTTGAGAGGTCATTCGTAGCCATAGTTATAACTCATATATATCATGCATGAACAAATGTTGAGAGACTGCAGAGGTTCTGTAGTCATTCATAGCTTTGGTAAACCTTGTGAATGCATGTTTCTTTTGAGGATGTTGTGTTGCTTATAGAAAAAATTTCAAAGGAAATTTGTAAATAACTCTATGAATTTGTATGGTGTGTGGGCCGTGGGACTTGTGAAGGCCGATTCGACTTCAATCTTTGATGGTGGATTCTATATATGTTTACTCAATTACTTGCTTACTTTATCGTGTGGGATAATATGTTCAGGCATTATTATTTATATACTAGGTCTTTAAGGTGGTATTCCCTTTTGTGGAAGATTTTTCCATTCCCTTGTTTCATTTTCTCATTGTAGTATTTATCATAACCAAAGCCAGCTTTGATGCTGCAGGGATTGAAATTGATGAGGTTGAACTTGCGCGCTTTGTTGAGCATGTTGATAAGGATAATAATGGAATTATCACTTTTGAAGAATGGAGAGATTTTCTTCTTCTTTATCCTCACGAAGCAACCCTTGAAAATATATATCAACATTGGGAGAGGGTATGCCTTGTAGACATTGGAGAACAAGCTGTCATTCCTGAAGGCATCAGCAAGCATGTGCACAGGAGCAGATATTTTATTGCAGGGGGAATAGCAGGAGCTGCTTCTCGCACAGCAACTGCTCCTCTTGATCGTCTAAAGGTGGTCTTACAAATTCAGACTGGAAAGGCATCCATTATGCCAGCAGTAATGAAGATATGGCAACGAGACGGTTTATTAGGGTTTTTCCGAGGTAATGGGTTGAATGTTGTGAAGGTTGCACCTGAGAGCGCCATCAAGTTTTATGCTTATGAAATGCTGAAAAATGTAATTGGAGATAGTCAAGGGAACAAGTCAGATATTGGTACTGCCGGAAGACTTTTTGCAGGTGGCATGGCTGGTGCCATTGCACAGATTGCTATCTATCCATTGGATCTTATCAAAACTAGGTTACAGACATGTGCGTCTGAAGGTGGAAAGGCTCCGAACCTAGGAACCCTTACAAAGGATATATGGATCCAAGAGGGACCCCGGGCTTTCTATAGAGGCCTTGTTCCATCTCTTCTTGGTATGATTCCTTATGCAGGCATTGATCTCACTGCTTATGACACCTTGAAAGATATATCCAAGAAATATATTATATCTGACCATGGTATGATATTTTTGCCACTCTTGATCTCTTTAACTTATTTAATTTCGTTTGTACACCTTATATTCTTATTGATAAATTGACACTTCTAGCATATTTAACCTTTTTATGCTCTTTTCTTCTTCATAGAACCTGGTCCTCTAGTACAACTTGGATGTGGGACAGTTTCGGGAGCTCTTGGAGCTACTTGTGTCTATCCACTGCAGGTTATTCGTACAAGGTATTGTTTTGTGCCATAAGTAATGTTTTTCTCTGGTCTTCTCGCCCCAAAAGCAAATAATGAGTGTGGGATGATATCGGTTTTGTTCTTGATAGCTAGTTTTATAATGGCTAACTTGCACTTATATGTCCTTTAGTTATTTTAGGTTTCCCTTTGGTCCTTAAGTTTTTTTTGTTCCACTTTGGTCCCTTAATTTACGAATGTTAGACATTTTGGTCCTTCCTGCCTGGTCTCCATATTTGAGTCCGTCAAATGTTTGGCACTACAATTTGTTGATTAGGAGCCTCACCCAGCAAGAAGAAGAAGAAGGAAACACAAGAAATGGGAACATTTGACAGACTCAAATGAAAAACTGAAAGAAAGGACAAAAATCTGTAACATTTGTAACTTGGGACCAAAATGGAACGAAAAAAACTTAAGGGACCAAAGTAAAACCTGAAAACAACTCAAGGATCCAAAATAAAATTTAACCTTTTAGAATTTATACAATGTATGTTCTTTAATTACATTACATTGCCATGCTTCTCAGGCTGCAGGCGCAACCTACCAACACTTCTAGTGCTTACAAGGGAATGTCTGATGTTTTTTGGAAAACCCTTAAGGACGAAGGCTTTCGAGGGTTCTACAAGGGACTCATTCCAAATCTCCTCAAAGTTGTGCCGGCTGCAAGTATTACTTACATGGTTTATGAAAATATGAAGAAGAATTTAGATCTTGATTAG
Protein sequence

>MS.gene70123.t1

MSGAIDMDHVGFSKPKSSPATSPTTDHGRGKKPGSISMDHVLLALRETKEERDVRIRSLFNFFDATNKGYLDYAHIEAGLSALQIPPEYKYAKELFKICDADRDGRIDYHDFRRYMDDKELELYRIFQAIDVEHNGCILPEELWDALVKAGIEIDEVELARFVEHVDKDNNGIITFEEWRDFLLLYPHEATLENIYQHWERVCLVDIGEQAVIPEGISKHVHRSRYFIAGGIAGAASRTATAPLDRLKVVLQIQTGKASIMPAVMKIWQRDGLLGFFRGNGLNVVKVAPESAIKFYAYEMLKNVIGDSQGNKSDIGTAGRLFAGGMAGAIAQIAIYPLDLIKTRLQTCASEGGKAPNLGTLTKDIWIQEGPRAFYRGLVPSLLGMIPYAGIDLTAYDTLKDISKKYIISDHEPGPLVQLGCGTVSGALGATCVYPLQVIRTRLQAQPTNTSSAYKGMSDVFWKTLKDEGFRGFYKGLIPNLLKVVPAASITYMVYENMKKNLDLD