Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41630.t1 | XP_003602734.1 | 97.9 | 483 | 10 | 0 | 1 | 483 | 1 | 483 | 1.40E-277 | 964.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41630.t1 | Q9FI43 | 71.1 | 477 | 131 | 3 | 9 | 483 | 16 | 487 | 2.4e-198 | 693.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41630.t1 | G7J2S0 | 97.9 | 483 | 10 | 0 | 1 | 483 | 1 | 483 | 9.9e-278 | 964.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049178 | MS.gene41630 | 0.989243 | 2.73E-177 | -1.69E-46 |
| MS.gene049208 | MS.gene41630 | 0.821354 | 4.22E-53 | -1.69E-46 |
| MS.gene049887 | MS.gene41630 | 0.80631 | 8.75E-50 | -1.69E-46 |
| MS.gene050114 | MS.gene41630 | 0.810273 | 1.25E-50 | -1.69E-46 |
| MS.gene050439 | MS.gene41630 | 0.831352 | 1.75E-55 | -1.69E-46 |
| MS.gene050629 | MS.gene41630 | -0.81438 | 1.59E-51 | -1.69E-46 |
| MS.gene050762 | MS.gene41630 | 0.822013 | 2.97E-53 | -1.69E-46 |
| MS.gene050763 | MS.gene41630 | 0.81979 | 9.65E-53 | -1.69E-46 |
| MS.gene051700 | MS.gene41630 | 0.807272 | 5.48E-50 | -1.69E-46 |
| MS.gene051790 | MS.gene41630 | 0.805148 | 1.54E-49 | -1.69E-46 |
| MS.gene052858 | MS.gene41630 | 0.810966 | 8.86E-51 | -1.69E-46 |
| MS.gene054379 | MS.gene41630 | 0.808135 | 3.59E-50 | -1.69E-46 |
| MS.gene055311 | MS.gene41630 | 0.833014 | 6.80E-56 | -1.69E-46 |
| MS.gene055313 | MS.gene41630 | 0.835447 | 1.67E-56 | -1.69E-46 |
| MS.gene055314 | MS.gene41630 | 0.814734 | 1.32E-51 | -1.69E-46 |
| MS.gene055469 | MS.gene41630 | 0.802902 | 4.50E-49 | -1.69E-46 |
| MS.gene055603 | MS.gene41630 | 0.820097 | 8.21E-53 | -1.69E-46 |
| MS.gene056403 | MS.gene41630 | 0.804202 | 2.42E-49 | -1.69E-46 |
| MS.gene056552 | MS.gene41630 | 0.805114 | 1.56E-49 | -1.69E-46 |
| MS.gene056605 | MS.gene41630 | 0.800162 | 1.64E-48 | -1.69E-46 |
| MS.gene057360 | MS.gene41630 | 0.813314 | 2.73E-51 | -1.69E-46 |
| MS.gene058638 | MS.gene41630 | 0.831489 | 1.62E-55 | -1.69E-46 |
| MS.gene058639 | MS.gene41630 | 0.849475 | 3.16E-60 | -1.69E-46 |
| MS.gene058758 | MS.gene41630 | 0.813573 | 2.39E-51 | -1.69E-46 |
| MS.gene058852 | MS.gene41630 | 0.801144 | 1.03E-48 | -1.69E-46 |
| MS.gene059170 | MS.gene41630 | 0.802617 | 5.15E-49 | -1.69E-46 |
| MS.gene059171 | MS.gene41630 | 0.816488 | 5.39E-52 | -1.69E-46 |
| MS.gene06001 | MS.gene41630 | 0.801953 | 7.06E-49 | -1.69E-46 |
| MS.gene060637 | MS.gene41630 | 0.80104 | 1.09E-48 | -1.69E-46 |
| MS.gene060869 | MS.gene41630 | 0.852299 | 5.06E-61 | -1.69E-46 |
| MS.gene060870 | MS.gene41630 | 0.83769 | 4.48E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene41630 | MS.gene57378 | PPI |
| MS.gene41630 | MS.gene58411 | PPI |
| MS.gene061737 | MS.gene41630 | PPI |
| MS.gene41630 | MS.gene89324 | PPI |
| MS.gene28396 | MS.gene41630 | PPI |
| MS.gene41630 | MS.gene055205 | PPI |
| MS.gene41630 | MS.gene033106 | PPI |
| MS.gene41630 | MS.gene030630 | PPI |
| MS.gene41630 | MS.gene46108 | PPI |
| MS.gene89800 | MS.gene41630 | PPI |
| MS.gene41630 | MS.gene91577 | PPI |
| MS.gene70227 | MS.gene41630 | PPI |
| MS.gene41630 | MS.gene044401 | PPI |
| MS.gene41630 | MS.gene57380 | PPI |
| MS.gene41630 | MS.gene75421 | PPI |
| MS.gene013810 | MS.gene41630 | PPI |
| MS.gene045060 | MS.gene41630 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41630.t1 | MTR_3g098460 | 97.930 | 483 | 10 | 0 | 1 | 483 | 1 | 483 | 0.0 | 987 |
| MS.gene41630.t1 | MTR_8g096050 | 79.665 | 477 | 97 | 0 | 7 | 483 | 29 | 505 | 0.0 | 804 |
| MS.gene41630.t1 | MTR_7g084400 | 68.530 | 483 | 139 | 3 | 9 | 483 | 11 | 488 | 0.0 | 697 |
| MS.gene41630.t1 | MTR_7g084400 | 64.286 | 406 | 142 | 2 | 9 | 412 | 11 | 415 | 0.0 | 549 |
| MS.gene41630.t1 | MTR_7g084400 | 29.949 | 197 | 123 | 4 | 288 | 478 | 196 | 383 | 6.44e-20 | 92.4 |
| MS.gene41630.t1 | MTR_8g027975 | 40.777 | 309 | 154 | 8 | 203 | 483 | 49 | 356 | 1.90e-67 | 221 |
| MS.gene41630.t1 | MTR_5g009500 | 42.020 | 307 | 151 | 8 | 203 | 483 | 36 | 341 | 6.65e-66 | 216 |
| MS.gene41630.t1 | MTR_3g107510 | 36.331 | 278 | 173 | 3 | 203 | 480 | 120 | 393 | 5.17e-53 | 184 |
| MS.gene41630.t1 | MTR_1g012030 | 36.331 | 278 | 173 | 2 | 203 | 480 | 137 | 410 | 3.12e-52 | 182 |
| MS.gene41630.t1 | MTR_1g012030 | 30.939 | 181 | 122 | 3 | 202 | 380 | 230 | 409 | 1.88e-17 | 84.7 |
| MS.gene41630.t1 | MTR_4g114320 | 36.201 | 279 | 172 | 4 | 203 | 480 | 121 | 394 | 8.59e-50 | 175 |
| MS.gene41630.t1 | MTR_6g091800 | 32.432 | 296 | 178 | 6 | 202 | 480 | 16 | 306 | 2.54e-45 | 161 |
| MS.gene41630.t1 | MTR_7g064980 | 30.696 | 316 | 192 | 8 | 186 | 481 | 7 | 315 | 2.88e-45 | 161 |
| MS.gene41630.t1 | MTR_7g064980 | 29.130 | 230 | 143 | 7 | 165 | 384 | 98 | 317 | 6.59e-22 | 96.7 |
| MS.gene41630.t1 | MTR_3g104600 | 30.945 | 307 | 177 | 7 | 203 | 482 | 33 | 331 | 3.36e-44 | 159 |
| MS.gene41630.t1 | MTR_3g104600 | 27.184 | 206 | 122 | 5 | 299 | 483 | 35 | 233 | 9.75e-16 | 79.0 |
| MS.gene41630.t1 | MTR_6g091800 | 30.312 | 320 | 177 | 7 | 202 | 480 | 16 | 330 | 4.76e-43 | 155 |
| MS.gene41630.t1 | MTR_2g436930 | 31.475 | 305 | 169 | 6 | 207 | 474 | 17 | 318 | 2.51e-41 | 150 |
| MS.gene41630.t1 | MTR_2g436930 | 29.381 | 194 | 118 | 4 | 301 | 478 | 17 | 207 | 9.63e-20 | 90.5 |
| MS.gene41630.t1 | MTR_5g081150 | 33.788 | 293 | 172 | 9 | 205 | 480 | 34 | 321 | 3.92e-41 | 150 |
| MS.gene41630.t1 | MTR_5g081150 | 29.958 | 237 | 141 | 7 | 157 | 378 | 92 | 318 | 6.77e-19 | 88.2 |
| MS.gene41630.t1 | MTR_5g081150 | 32.663 | 199 | 115 | 5 | 292 | 477 | 27 | 219 | 1.34e-14 | 75.1 |
| MS.gene41630.t1 | MTR_7g068340 | 31.502 | 273 | 161 | 7 | 216 | 478 | 98 | 354 | 3.16e-38 | 143 |
| MS.gene41630.t1 | MTR_7g068340 | 29.545 | 176 | 111 | 4 | 310 | 480 | 98 | 265 | 2.86e-17 | 84.0 |
| MS.gene41630.t1 | MTR_7g068340 | 24.713 | 174 | 124 | 2 | 207 | 380 | 189 | 355 | 3.89e-14 | 74.3 |
| MS.gene41630.t1 | MTR_4g119770 | 28.662 | 314 | 182 | 6 | 207 | 481 | 16 | 326 | 2.31e-37 | 140 |
| MS.gene41630.t1 | MTR_4g119770 | 23.671 | 207 | 130 | 6 | 198 | 379 | 120 | 323 | 2.11e-11 | 65.5 |
| MS.gene41630.t1 | MTR_6g091800 | 29.139 | 302 | 168 | 7 | 202 | 462 | 16 | 312 | 2.77e-36 | 136 |
| MS.gene41630.t1 | MTR_7g109135 | 30.928 | 291 | 176 | 7 | 207 | 480 | 24 | 306 | 6.16e-36 | 135 |
| MS.gene41630.t1 | MTR_1g087840 | 31.673 | 281 | 167 | 6 | 217 | 480 | 31 | 303 | 3.16e-34 | 131 |
| MS.gene41630.t1 | MTR_6g091800 | 29.252 | 294 | 149 | 6 | 202 | 480 | 16 | 265 | 3.55e-34 | 130 |
| MS.gene41630.t1 | MTR_6g034145 | 29.921 | 254 | 159 | 4 | 241 | 480 | 4 | 252 | 6.34e-34 | 129 |
| MS.gene41630.t1 | MTR_6g034145 | 25.510 | 196 | 119 | 5 | 205 | 379 | 61 | 250 | 4.50e-13 | 69.7 |
| MS.gene41630.t1 | MTR_6g091800 | 32.203 | 236 | 140 | 5 | 202 | 422 | 16 | 246 | 1.35e-33 | 128 |
| MS.gene41630.t1 | MTR_6g091800 | 33.500 | 200 | 112 | 4 | 296 | 480 | 16 | 209 | 8.35e-26 | 106 |
| MS.gene41630.t1 | MTR_3g074490 | 31.908 | 304 | 179 | 8 | 200 | 483 | 111 | 406 | 2.71e-32 | 127 |
| MS.gene41630.t1 | MTR_8g090210 | 31.013 | 316 | 184 | 9 | 193 | 483 | 94 | 400 | 3.49e-32 | 127 |
| MS.gene41630.t1 | MTR_6g092210 | 29.032 | 248 | 163 | 4 | 241 | 480 | 4 | 246 | 4.19e-32 | 123 |
| MS.gene41630.t1 | MTR_6g092210 | 25.789 | 190 | 120 | 5 | 205 | 379 | 61 | 244 | 2.96e-12 | 67.0 |
| MS.gene41630.t1 | MTR_6g091800 | 27.358 | 318 | 148 | 7 | 202 | 480 | 16 | 289 | 4.35e-32 | 124 |
| MS.gene41630.t1 | MTR_6g091800 | 29.615 | 260 | 139 | 6 | 202 | 422 | 16 | 270 | 1.60e-31 | 123 |
| MS.gene41630.t1 | MTR_6g091800 | 30.804 | 224 | 110 | 5 | 296 | 480 | 16 | 233 | 9.38e-23 | 98.6 |
| MS.gene41630.t1 | MTR_4g016730 | 29.316 | 307 | 175 | 8 | 185 | 478 | 76 | 353 | 9.51e-31 | 122 |
| MS.gene41630.t1 | MTR_7g109135 | 29.553 | 291 | 173 | 8 | 207 | 480 | 24 | 299 | 2.39e-30 | 120 |
| MS.gene41630.t1 | MTR_3g104500 | 26.367 | 311 | 193 | 8 | 196 | 482 | 25 | 323 | 9.75e-30 | 119 |
| MS.gene41630.t1 | MTR_7g109135 | 31.915 | 235 | 143 | 6 | 255 | 480 | 2 | 228 | 1.59e-29 | 116 |
| MS.gene41630.t1 | MTR_4g005330 | 28.571 | 301 | 183 | 8 | 205 | 483 | 66 | 356 | 2.31e-29 | 119 |
| MS.gene41630.t1 | MTR_5g055410 | 32.734 | 278 | 168 | 10 | 217 | 480 | 33 | 305 | 4.69e-29 | 117 |
| MS.gene41630.t1 | MTR_4g005330 | 28.333 | 300 | 183 | 8 | 206 | 483 | 1 | 290 | 1.81e-28 | 114 |
| MS.gene41630.t1 | MTR_2g436930 | 29.825 | 228 | 141 | 4 | 265 | 474 | 2 | 228 | 2.27e-27 | 110 |
| MS.gene41630.t1 | MTR_2g436930 | 24.638 | 207 | 128 | 7 | 198 | 379 | 29 | 232 | 7.06e-12 | 65.9 |
| MS.gene41630.t1 | MTR_7g109135 | 35.057 | 174 | 99 | 4 | 315 | 480 | 40 | 207 | 1.16e-26 | 107 |
| MS.gene41630.t1 | MTR_4g012850 | 26.389 | 288 | 201 | 6 | 192 | 474 | 5 | 286 | 1.95e-26 | 109 |
| MS.gene41630.t1 | MTR_3g025800 | 28.221 | 326 | 191 | 9 | 192 | 481 | 14 | 332 | 3.49e-26 | 109 |
| MS.gene41630.t1 | MTR_6g091910 | 30.808 | 198 | 119 | 4 | 296 | 480 | 16 | 208 | 9.99e-26 | 105 |
| MS.gene41630.t1 | MTR_6g091910 | 27.179 | 195 | 121 | 4 | 202 | 379 | 16 | 206 | 6.61e-18 | 82.8 |
| MS.gene41630.t1 | MTR_1g095780 | 21.286 | 451 | 326 | 10 | 35 | 481 | 360 | 785 | 4.71e-25 | 109 |
| MS.gene41630.t1 | MTR_8g076760 | 29.537 | 281 | 176 | 7 | 221 | 482 | 30 | 307 | 3.31e-24 | 103 |
| MS.gene41630.t1 | MTR_8g076760 | 27.326 | 172 | 118 | 4 | 313 | 480 | 28 | 196 | 4.25e-16 | 79.3 |
| MS.gene41630.t1 | MTR_8g107270 | 26.596 | 282 | 187 | 6 | 203 | 468 | 16 | 293 | 3.97e-24 | 103 |
| MS.gene41630.t1 | MTR_4g119770 | 27.823 | 248 | 146 | 5 | 207 | 424 | 16 | 260 | 1.15e-23 | 100 |
| MS.gene41630.t1 | MTR_4g119770 | 29.082 | 196 | 118 | 4 | 301 | 478 | 16 | 208 | 1.02e-20 | 92.0 |
| MS.gene41630.t1 | MTR_5g081150 | 32.273 | 220 | 129 | 7 | 205 | 409 | 34 | 248 | 1.25e-22 | 97.4 |
| MS.gene41630.t1 | MTR_5g081150 | 32.500 | 200 | 116 | 5 | 292 | 478 | 27 | 220 | 3.79e-15 | 75.9 |
| MS.gene41630.t1 | MTR_5g081150 | 32.273 | 220 | 129 | 7 | 205 | 409 | 34 | 248 | 1.60e-22 | 97.1 |
| MS.gene41630.t1 | MTR_5g081150 | 32.500 | 200 | 116 | 5 | 292 | 478 | 27 | 220 | 3.21e-15 | 75.9 |
| MS.gene41630.t1 | MTR_5g073040 | 27.972 | 286 | 184 | 8 | 203 | 477 | 37 | 311 | 4.28e-22 | 97.4 |
| MS.gene41630.t1 | MTR_5g073040 | 28.962 | 183 | 122 | 2 | 299 | 481 | 39 | 213 | 1.32e-19 | 90.1 |
| MS.gene41630.t1 | MTR_6g091800 | 33.714 | 175 | 95 | 4 | 296 | 455 | 16 | 184 | 3.95e-20 | 88.6 |
| MS.gene41630.t1 | MTR_6g091800 | 38.400 | 125 | 73 | 3 | 202 | 323 | 16 | 139 | 3.39e-19 | 85.9 |
| MS.gene41630.t1 | MTR_2g102010 | 26.481 | 287 | 203 | 4 | 200 | 481 | 12 | 295 | 8.00e-20 | 90.1 |
| MS.gene41630.t1 | MTR_8g098240 | 26.027 | 292 | 190 | 8 | 201 | 483 | 316 | 590 | 2.25e-19 | 91.7 |
| MS.gene41630.t1 | MTR_3g028590 | 27.907 | 301 | 184 | 10 | 192 | 468 | 81 | 372 | 3.28e-19 | 89.7 |
| MS.gene41630.t1 | MTR_3g028590 | 27.907 | 301 | 184 | 10 | 192 | 468 | 77 | 368 | 3.38e-19 | 89.7 |
| MS.gene41630.t1 | MTR_6g091800 | 38.400 | 125 | 73 | 3 | 202 | 323 | 16 | 139 | 4.97e-19 | 85.9 |
| MS.gene41630.t1 | MTR_6g091800 | 30.653 | 199 | 93 | 5 | 296 | 455 | 16 | 208 | 3.54e-17 | 80.5 |
| MS.gene41630.t1 | MTR_1g097890 | 26.259 | 278 | 177 | 7 | 206 | 480 | 52 | 304 | 1.79e-18 | 86.7 |
| MS.gene41630.t1 | MTR_5g030530 | 27.815 | 302 | 185 | 10 | 202 | 480 | 5 | 296 | 1.86e-18 | 86.3 |
| MS.gene41630.t1 | MTR_8g066975 | 26.797 | 306 | 183 | 7 | 202 | 480 | 5 | 296 | 1.98e-18 | 86.3 |
| MS.gene41630.t1 | MTR_5g081910 | 26.792 | 265 | 158 | 9 | 245 | 476 | 54 | 315 | 1.02e-17 | 84.7 |
| MS.gene41630.t1 | MTR_5g081910 | 29.858 | 211 | 119 | 8 | 292 | 476 | 34 | 241 | 1.43e-17 | 82.8 |
| MS.gene41630.t1 | MTR_8g036880 | 26.690 | 281 | 185 | 6 | 205 | 468 | 102 | 378 | 1.60e-17 | 84.7 |
| MS.gene41630.t1 | MTR_8g092080 | 26.619 | 278 | 176 | 6 | 206 | 480 | 53 | 305 | 3.96e-17 | 82.8 |
| MS.gene41630.t1 | MTR_8g092080 | 30.556 | 180 | 100 | 6 | 299 | 477 | 52 | 207 | 1.88e-14 | 74.7 |
| MS.gene41630.t1 | MTR_4g057850 | 24.742 | 291 | 185 | 10 | 206 | 476 | 23 | 299 | 5.66e-17 | 82.0 |
| MS.gene41630.t1 | MTR_1g090330 | 28.090 | 178 | 118 | 4 | 288 | 459 | 4 | 177 | 2.32e-16 | 80.1 |
| MS.gene41630.t1 | MTR_1g090330 | 23.404 | 282 | 198 | 7 | 210 | 478 | 19 | 295 | 4.18e-16 | 79.3 |
| MS.gene41630.t1 | MTR_1g088995 | 25.874 | 286 | 199 | 6 | 204 | 483 | 32 | 310 | 2.48e-16 | 80.1 |
| MS.gene41630.t1 | MTR_4g078545 | 28.470 | 281 | 179 | 9 | 205 | 468 | 75 | 350 | 2.94e-16 | 80.9 |
| MS.gene41630.t1 | MTR_1g036280 | 27.113 | 284 | 148 | 12 | 253 | 482 | 79 | 357 | 3.46e-16 | 80.5 |
| MS.gene41630.t1 | MTR_6g015860 | 24.918 | 305 | 207 | 7 | 192 | 478 | 4 | 304 | 5.18e-16 | 79.3 |
| MS.gene41630.t1 | MTR_6g015860 | 24.599 | 187 | 133 | 5 | 299 | 480 | 18 | 201 | 2.94e-11 | 65.1 |
| MS.gene41630.t1 | MTR_4g018750 | 26.190 | 294 | 184 | 9 | 205 | 478 | 15 | 295 | 9.00e-16 | 78.2 |
| MS.gene41630.t1 | MTR_2g098070 | 28.470 | 281 | 179 | 9 | 205 | 468 | 66 | 341 | 2.18e-15 | 77.8 |
| MS.gene41630.t1 | MTR_6g034515 | 24.436 | 266 | 182 | 6 | 221 | 477 | 83 | 338 | 5.13e-15 | 77.0 |
| MS.gene41630.t1 | MTR_3g100570 | 24.684 | 316 | 191 | 7 | 203 | 480 | 4 | 310 | 8.13e-15 | 75.5 |
| MS.gene41630.t1 | MTR_7g015870 | 25.000 | 308 | 187 | 9 | 200 | 478 | 20 | 312 | 1.18e-14 | 75.1 |
| MS.gene41630.t1 | MTR_7g015870 | 28.500 | 200 | 115 | 6 | 206 | 383 | 123 | 316 | 8.65e-12 | 66.6 |
| MS.gene41630.t1 | MTR_7g015870 | 25.000 | 308 | 187 | 9 | 200 | 478 | 16 | 308 | 5.81e-14 | 73.2 |
| MS.gene41630.t1 | MTR_7g066690 | 24.832 | 298 | 183 | 8 | 205 | 478 | 17 | 297 | 1.19e-13 | 72.0 |
| MS.gene41630.t1 | MTR_8g099910 | 26.984 | 252 | 160 | 8 | 207 | 441 | 74 | 318 | 1.45e-13 | 72.4 |
| MS.gene41630.t1 | MTR_3g462140 | 25.753 | 299 | 194 | 7 | 198 | 478 | 8 | 296 | 1.63e-13 | 71.6 |
| MS.gene41630.t1 | MTR_1g088995 | 26.923 | 156 | 107 | 3 | 303 | 457 | 37 | 186 | 2.12e-13 | 70.1 |
| MS.gene41630.t1 | MTR_6g033280 | 26.446 | 242 | 157 | 7 | 206 | 433 | 64 | 298 | 8.79e-13 | 70.1 |
| MS.gene41630.t1 | MTR_4g088545 | 27.368 | 190 | 125 | 4 | 300 | 480 | 13 | 198 | 9.18e-13 | 68.6 |
| MS.gene41630.t1 | MTR_8g086070 | 22.887 | 284 | 203 | 7 | 203 | 478 | 19 | 294 | 1.43e-12 | 68.9 |
| MS.gene41630.t1 | MTR_7g083790 | 29.289 | 239 | 149 | 9 | 207 | 431 | 83 | 315 | 1.69e-12 | 69.3 |
| MS.gene41630.t1 | MTR_4g132070 | 29.655 | 145 | 95 | 3 | 19 | 157 | 381 | 524 | 1.84e-12 | 69.7 |
| MS.gene41630.t1 | MTR_8g086070 | 30.723 | 166 | 103 | 5 | 302 | 463 | 24 | 181 | 2.58e-12 | 66.6 |
| MS.gene41630.t1 | MTR_3g104810 | 23.810 | 336 | 211 | 9 | 184 | 478 | 10 | 341 | 2.68e-12 | 68.6 |
| MS.gene41630.t1 | MTR_3g104810 | 33.333 | 156 | 83 | 5 | 249 | 383 | 190 | 345 | 6.62e-12 | 67.4 |
| MS.gene41630.t1 | MTR_1g026190 | 30.822 | 146 | 92 | 4 | 19 | 157 | 372 | 515 | 3.09e-12 | 68.9 |
| MS.gene41630.t1 | MTR_4g088545 | 27.368 | 190 | 125 | 4 | 300 | 480 | 13 | 198 | 3.24e-12 | 67.4 |
| MS.gene41630.t1 | MTR_4g088545 | 27.368 | 190 | 125 | 4 | 300 | 480 | 13 | 198 | 4.28e-12 | 67.4 |
| MS.gene41630.t1 | MTR_2g032610 | 23.891 | 293 | 202 | 10 | 200 | 474 | 24 | 313 | 5.77e-12 | 67.0 |
| MS.gene41630.t1 | MTR_5g092810 | 30.556 | 144 | 93 | 3 | 20 | 157 | 383 | 525 | 6.49e-12 | 68.2 |
| MS.gene41630.t1 | MTR_4g094578 | 22.535 | 284 | 197 | 9 | 205 | 477 | 29 | 300 | 1.03e-11 | 66.2 |
| MS.gene41630.t1 | MTR_5g009830 | 29.801 | 151 | 97 | 4 | 12 | 157 | 353 | 499 | 1.50e-11 | 67.0 |
| MS.gene41630.t1 | MTR_7g117030 | 22.619 | 252 | 175 | 7 | 247 | 481 | 88 | 336 | 4.24e-11 | 64.7 |
| MS.gene41630.t1 | MTR_1g046950 | 27.206 | 136 | 91 | 1 | 34 | 161 | 5 | 140 | 9.74e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41630.t1 | AT5G51050 | 71.069 | 477 | 131 | 3 | 9 | 483 | 27 | 498 | 0.0 | 709 |
| MS.gene41630.t1 | AT5G07320 | 70.737 | 475 | 131 | 2 | 9 | 483 | 13 | 479 | 0.0 | 704 |
| MS.gene41630.t1 | AT5G61810 | 67.857 | 476 | 143 | 4 | 9 | 483 | 12 | 478 | 0.0 | 672 |
| MS.gene41630.t1 | AT5G61810 | 69.767 | 344 | 94 | 4 | 141 | 483 | 1 | 335 | 1.26e-175 | 496 |
| MS.gene41630.t1 | AT4G01100 | 40.952 | 315 | 145 | 8 | 203 | 483 | 40 | 347 | 4.06e-70 | 227 |
| MS.gene41630.t1 | AT4G01100 | 39.877 | 326 | 147 | 8 | 203 | 483 | 40 | 361 | 1.18e-68 | 224 |
| MS.gene41630.t1 | AT4G01100 | 40.594 | 303 | 139 | 8 | 215 | 483 | 2 | 297 | 5.05e-66 | 215 |
| MS.gene41630.t1 | AT4G01100 | 26.857 | 175 | 123 | 1 | 308 | 477 | 1 | 175 | 1.79e-19 | 89.4 |
| MS.gene41630.t1 | AT4G01100 | 27.919 | 197 | 119 | 4 | 207 | 380 | 97 | 293 | 3.47e-16 | 79.7 |
| MS.gene41630.t1 | AT4G32400 | 37.413 | 286 | 172 | 5 | 197 | 480 | 105 | 385 | 4.94e-54 | 186 |
| MS.gene41630.t1 | AT3G53940 | 34.114 | 299 | 179 | 7 | 198 | 481 | 66 | 361 | 4.68e-48 | 169 |
| MS.gene41630.t1 | AT3G55640 | 33.444 | 302 | 183 | 7 | 191 | 477 | 24 | 322 | 1.18e-46 | 165 |
| MS.gene41630.t1 | AT3G55640 | 33.444 | 302 | 183 | 7 | 191 | 477 | 24 | 322 | 1.18e-46 | 165 |
| MS.gene41630.t1 | AT2G37890 | 31.429 | 315 | 186 | 8 | 188 | 480 | 26 | 332 | 1.58e-43 | 157 |
| MS.gene41630.t1 | AT2G37890 | 30.603 | 232 | 150 | 5 | 157 | 380 | 103 | 331 | 2.92e-26 | 109 |
| MS.gene41630.t1 | AT4G26180 | 30.435 | 299 | 185 | 6 | 202 | 482 | 18 | 311 | 3.05e-43 | 156 |
| MS.gene41630.t1 | AT4G26180 | 35.149 | 202 | 112 | 4 | 296 | 483 | 18 | 214 | 6.45e-29 | 117 |
| MS.gene41630.t1 | AT1G14560 | 31.010 | 287 | 166 | 8 | 216 | 477 | 38 | 317 | 3.30e-40 | 147 |
| MS.gene41630.t1 | AT1G14560 | 29.474 | 190 | 113 | 4 | 310 | 483 | 38 | 222 | 8.49e-20 | 90.9 |
| MS.gene41630.t1 | AT4G26180 | 29.749 | 279 | 173 | 6 | 202 | 462 | 18 | 291 | 1.67e-37 | 139 |
| MS.gene41630.t1 | AT4G26180 | 35.149 | 202 | 112 | 4 | 296 | 483 | 18 | 214 | 3.13e-29 | 117 |
| MS.gene41630.t1 | AT5G01500 | 31.502 | 273 | 161 | 9 | 216 | 478 | 130 | 386 | 2.93e-36 | 139 |
| MS.gene41630.t1 | AT5G01500 | 30.114 | 176 | 110 | 4 | 310 | 480 | 130 | 297 | 8.17e-17 | 82.8 |
| MS.gene41630.t1 | AT5G01500 | 27.586 | 174 | 119 | 2 | 207 | 380 | 221 | 387 | 4.97e-12 | 68.2 |
| MS.gene41630.t1 | AT3G21390 | 29.545 | 308 | 173 | 6 | 207 | 474 | 21 | 324 | 5.61e-36 | 136 |
| MS.gene41630.t1 | AT3G21390 | 30.729 | 192 | 116 | 5 | 301 | 478 | 21 | 209 | 3.42e-20 | 92.0 |
| MS.gene41630.t1 | AT3G21390 | 29.545 | 308 | 173 | 6 | 207 | 474 | 43 | 346 | 6.27e-36 | 137 |
| MS.gene41630.t1 | AT3G21390 | 30.729 | 192 | 116 | 5 | 301 | 478 | 43 | 231 | 4.02e-20 | 92.0 |
| MS.gene41630.t1 | AT5G64970 | 31.975 | 319 | 177 | 9 | 191 | 483 | 121 | 425 | 6.23e-35 | 135 |
| MS.gene41630.t1 | AT3G51870 | 29.044 | 272 | 169 | 7 | 216 | 478 | 102 | 358 | 9.63e-35 | 134 |
| MS.gene41630.t1 | AT3G51870 | 27.807 | 187 | 125 | 3 | 207 | 390 | 193 | 372 | 7.60e-15 | 76.6 |
| MS.gene41630.t1 | AT3G51870 | 27.933 | 179 | 116 | 4 | 310 | 483 | 102 | 272 | 3.74e-14 | 74.3 |
| MS.gene41630.t1 | AT5G48970 | 28.710 | 310 | 174 | 8 | 207 | 474 | 24 | 328 | 5.83e-34 | 131 |
| MS.gene41630.t1 | AT5G48970 | 30.612 | 196 | 113 | 6 | 301 | 478 | 24 | 214 | 6.33e-20 | 91.3 |
| MS.gene41630.t1 | AT5G48970 | 22.967 | 209 | 132 | 5 | 198 | 379 | 126 | 332 | 1.57e-11 | 66.2 |
| MS.gene41630.t1 | AT1G14560 | 29.779 | 272 | 159 | 8 | 216 | 462 | 38 | 302 | 7.45e-34 | 130 |
| MS.gene41630.t1 | AT1G14560 | 29.474 | 190 | 113 | 4 | 310 | 483 | 38 | 222 | 4.89e-20 | 91.3 |
| MS.gene41630.t1 | AT5G64970 | 31.908 | 304 | 167 | 9 | 206 | 483 | 12 | 301 | 2.08e-32 | 125 |
| MS.gene41630.t1 | AT1G78180 | 31.683 | 303 | 181 | 6 | 200 | 483 | 123 | 418 | 2.18e-30 | 122 |
| MS.gene41630.t1 | AT3G55640 | 31.897 | 232 | 142 | 5 | 191 | 409 | 24 | 252 | 2.19e-29 | 116 |
| MS.gene41630.t1 | AT3G55640 | 28.571 | 203 | 130 | 4 | 287 | 478 | 26 | 224 | 7.75e-19 | 86.7 |
| MS.gene41630.t1 | AT3G55640 | 31.897 | 232 | 142 | 5 | 191 | 409 | 24 | 252 | 2.19e-29 | 116 |
| MS.gene41630.t1 | AT3G55640 | 28.571 | 203 | 130 | 4 | 287 | 478 | 26 | 224 | 7.75e-19 | 86.7 |
| MS.gene41630.t1 | AT3G53940 | 33.333 | 225 | 134 | 5 | 198 | 409 | 66 | 287 | 8.36e-29 | 115 |
| MS.gene41630.t1 | AT3G53940 | 32.367 | 207 | 126 | 5 | 280 | 477 | 57 | 258 | 3.16e-21 | 94.4 |
| MS.gene41630.t1 | AT3G20240 | 27.213 | 305 | 190 | 8 | 198 | 480 | 45 | 339 | 2.13e-28 | 115 |
| MS.gene41630.t1 | AT5G48970 | 28.295 | 258 | 163 | 5 | 238 | 474 | 1 | 257 | 2.37e-28 | 114 |
| MS.gene41630.t1 | AT5G48970 | 31.944 | 144 | 88 | 3 | 340 | 478 | 5 | 143 | 6.14e-16 | 78.2 |
| MS.gene41630.t1 | AT5G48970 | 22.967 | 209 | 132 | 5 | 198 | 379 | 55 | 261 | 2.46e-12 | 67.8 |
| MS.gene41630.t1 | AT2G47490 | 30.072 | 276 | 177 | 5 | 217 | 480 | 29 | 300 | 2.78e-28 | 114 |
| MS.gene41630.t1 | AT1G74240 | 28.852 | 305 | 184 | 6 | 205 | 480 | 36 | 336 | 4.49e-28 | 115 |
| MS.gene41630.t1 | AT1G74240 | 29.126 | 206 | 119 | 4 | 299 | 481 | 36 | 237 | 9.45e-20 | 91.3 |
| MS.gene41630.t1 | AT1G14560 | 32.663 | 199 | 110 | 5 | 299 | 477 | 25 | 219 | 4.76e-28 | 112 |
| MS.gene41630.t1 | AT1G14560 | 27.500 | 200 | 116 | 5 | 205 | 379 | 25 | 220 | 1.07e-14 | 73.9 |
| MS.gene41630.t1 | AT1G14560 | 27.273 | 121 | 72 | 2 | 379 | 483 | 4 | 124 | 3.02e-11 | 63.9 |
| MS.gene41630.t1 | AT5G66380 | 30.241 | 291 | 184 | 7 | 207 | 480 | 12 | 300 | 6.65e-28 | 113 |
| MS.gene41630.t1 | AT5G66380 | 28.571 | 189 | 119 | 4 | 211 | 384 | 116 | 303 | 4.44e-11 | 64.3 |
| MS.gene41630.t1 | AT5G56450 | 25.497 | 302 | 195 | 6 | 203 | 481 | 32 | 326 | 9.59e-28 | 113 |
| MS.gene41630.t1 | AT2G35800 | 21.978 | 455 | 323 | 12 | 35 | 481 | 380 | 810 | 3.47e-27 | 115 |
| MS.gene41630.t1 | AT5G64970 | 30.537 | 298 | 167 | 9 | 191 | 462 | 121 | 404 | 3.96e-27 | 113 |
| MS.gene41630.t1 | AT5G64970 | 28.492 | 179 | 120 | 3 | 299 | 477 | 135 | 305 | 1.26e-12 | 70.1 |
| MS.gene41630.t1 | AT1G25380 | 28.261 | 276 | 176 | 7 | 217 | 476 | 33 | 302 | 6.82e-27 | 112 |
| MS.gene41630.t1 | AT1G25380 | 28.261 | 276 | 176 | 7 | 217 | 476 | 33 | 302 | 6.82e-27 | 112 |
| MS.gene41630.t1 | AT1G74240 | 28.028 | 289 | 175 | 6 | 221 | 480 | 4 | 288 | 2.05e-24 | 103 |
| MS.gene41630.t1 | AT1G74240 | 28.646 | 192 | 110 | 5 | 313 | 481 | 2 | 189 | 1.96e-16 | 80.5 |
| MS.gene41630.t1 | AT4G11440 | 26.733 | 303 | 196 | 8 | 192 | 482 | 317 | 605 | 8.52e-23 | 102 |
| MS.gene41630.t1 | AT4G11440 | 26.733 | 303 | 196 | 8 | 192 | 482 | 317 | 605 | 8.52e-23 | 102 |
| MS.gene41630.t1 | AT2G30160 | 28.720 | 289 | 182 | 8 | 203 | 477 | 40 | 318 | 1.49e-21 | 95.9 |
| MS.gene41630.t1 | AT2G30160 | 27.322 | 183 | 123 | 4 | 299 | 480 | 42 | 215 | 1.47e-15 | 78.2 |
| MS.gene41630.t1 | AT1G14140 | 24.161 | 298 | 205 | 8 | 195 | 477 | 6 | 297 | 2.03e-20 | 92.0 |
| MS.gene41630.t1 | AT1G34065 | 26.689 | 296 | 187 | 8 | 191 | 481 | 59 | 329 | 2.70e-20 | 92.4 |
| MS.gene41630.t1 | AT1G34065 | 26.689 | 296 | 187 | 8 | 191 | 481 | 66 | 336 | 3.03e-20 | 92.4 |
| MS.gene41630.t1 | AT5G17400 | 25.517 | 290 | 196 | 6 | 195 | 468 | 4 | 289 | 5.74e-20 | 90.9 |
| MS.gene41630.t1 | AT4G39460 | 28.520 | 277 | 174 | 6 | 205 | 480 | 58 | 311 | 6.20e-20 | 91.3 |
| MS.gene41630.t1 | AT4G39460 | 28.520 | 277 | 174 | 6 | 205 | 480 | 58 | 311 | 6.20e-20 | 91.3 |
| MS.gene41630.t1 | AT4G39460 | 28.520 | 277 | 174 | 6 | 205 | 480 | 58 | 311 | 6.20e-20 | 91.3 |
| MS.gene41630.t1 | AT1G07030 | 28.421 | 285 | 185 | 8 | 203 | 477 | 38 | 313 | 9.43e-20 | 90.5 |
| MS.gene41630.t1 | AT1G07030 | 28.962 | 183 | 120 | 4 | 299 | 480 | 40 | 213 | 6.55e-16 | 79.3 |
| MS.gene41630.t1 | AT5G46800 | 26.230 | 305 | 195 | 8 | 199 | 480 | 2 | 299 | 1.13e-18 | 87.0 |
| MS.gene41630.t1 | AT5G46800 | 26.230 | 305 | 195 | 8 | 199 | 480 | 2 | 299 | 1.13e-18 | 87.0 |
| MS.gene41630.t1 | AT5G46800 | 26.230 | 305 | 195 | 8 | 199 | 480 | 2 | 299 | 1.13e-18 | 87.0 |
| MS.gene41630.t1 | AT3G54110 | 27.551 | 294 | 184 | 9 | 203 | 478 | 13 | 295 | 1.97e-18 | 86.3 |
| MS.gene41630.t1 | AT5G13490 | 27.273 | 286 | 177 | 7 | 205 | 468 | 88 | 364 | 1.06e-17 | 85.1 |
| MS.gene41630.t1 | AT5G13490 | 27.273 | 286 | 177 | 7 | 205 | 468 | 88 | 364 | 1.06e-17 | 85.1 |
| MS.gene41630.t1 | AT5G58970 | 26.962 | 293 | 183 | 9 | 205 | 478 | 16 | 296 | 1.09e-17 | 84.0 |
| MS.gene41630.t1 | AT4G28390 | 27.758 | 281 | 181 | 9 | 205 | 468 | 83 | 358 | 1.26e-17 | 85.1 |
| MS.gene41630.t1 | AT4G28390 | 27.758 | 281 | 181 | 9 | 205 | 468 | 83 | 358 | 1.26e-17 | 85.1 |
| MS.gene41630.t1 | AT2G39970 | 27.511 | 229 | 134 | 8 | 280 | 482 | 101 | 323 | 3.71e-16 | 80.1 |
| MS.gene41630.t1 | AT5G01340 | 24.390 | 287 | 192 | 10 | 206 | 476 | 18 | 295 | 3.99e-16 | 79.7 |
| MS.gene41630.t1 | AT3G08580 | 25.267 | 281 | 189 | 6 | 205 | 468 | 84 | 360 | 7.40e-15 | 76.6 |
| MS.gene41630.t1 | AT3G08580 | 25.267 | 281 | 189 | 6 | 205 | 468 | 84 | 360 | 7.40e-15 | 76.6 |
| MS.gene41630.t1 | AT1G72820 | 23.676 | 321 | 212 | 7 | 191 | 478 | 16 | 336 | 7.74e-15 | 76.3 |
| MS.gene41630.t1 | AT1G72820 | 26.512 | 215 | 122 | 7 | 208 | 388 | 131 | 343 | 5.32e-11 | 64.7 |
| MS.gene41630.t1 | AT1G72820 | 23.676 | 321 | 212 | 7 | 191 | 478 | 16 | 336 | 7.74e-15 | 76.3 |
| MS.gene41630.t1 | AT1G72820 | 26.512 | 215 | 122 | 7 | 208 | 388 | 131 | 343 | 5.32e-11 | 64.7 |
| MS.gene41630.t1 | AT5G15640 | 24.759 | 311 | 206 | 9 | 195 | 483 | 11 | 315 | 8.46e-15 | 75.9 |
| MS.gene41630.t1 | AT5G15640 | 30.952 | 210 | 122 | 8 | 190 | 380 | 106 | 311 | 2.84e-14 | 73.9 |
| MS.gene41630.t1 | AT5G15640 | 30.952 | 210 | 122 | 8 | 190 | 380 | 113 | 318 | 2.98e-14 | 74.3 |
| MS.gene41630.t1 | AT5G15640 | 24.510 | 306 | 203 | 9 | 200 | 483 | 23 | 322 | 4.11e-14 | 73.6 |
| MS.gene41630.t1 | AT5G26200 | 24.752 | 303 | 203 | 7 | 200 | 478 | 34 | 335 | 3.97e-14 | 73.9 |
| MS.gene41630.t1 | AT1G79900 | 22.593 | 270 | 201 | 2 | 211 | 480 | 22 | 283 | 7.30e-14 | 72.8 |
| MS.gene41630.t1 | AT1G79900 | 28.402 | 169 | 117 | 3 | 208 | 375 | 112 | 277 | 8.94e-14 | 72.4 |
| MS.gene41630.t1 | AT4G04720 | 31.944 | 144 | 91 | 3 | 20 | 157 | 370 | 512 | 7.99e-14 | 74.3 |
| MS.gene41630.t1 | AT4G04720 | 31.944 | 144 | 91 | 3 | 20 | 157 | 370 | 512 | 7.99e-14 | 74.3 |
| MS.gene41630.t1 | AT5G14040 | 29.032 | 248 | 158 | 9 | 208 | 441 | 84 | 327 | 4.96e-13 | 70.9 |
| MS.gene41630.t1 | AT5G19760 | 23.860 | 285 | 199 | 8 | 203 | 478 | 16 | 291 | 5.85e-13 | 70.1 |
| MS.gene41630.t1 | AT2G26360 | 23.571 | 280 | 196 | 6 | 203 | 480 | 113 | 376 | 8.09e-13 | 70.5 |
| MS.gene41630.t1 | AT4G04740 | 31.690 | 142 | 90 | 3 | 26 | 161 | 365 | 505 | 1.83e-12 | 69.7 |
| MS.gene41630.t1 | AT4G04740 | 31.690 | 142 | 90 | 3 | 26 | 161 | 365 | 505 | 1.83e-12 | 69.7 |
| MS.gene41630.t1 | AT4G04740 | 31.690 | 142 | 90 | 3 | 26 | 161 | 365 | 505 | 1.83e-12 | 69.7 |
| MS.gene41630.t1 | AT4G04740 | 31.690 | 142 | 90 | 3 | 26 | 161 | 365 | 505 | 1.83e-12 | 69.7 |
| MS.gene41630.t1 | AT4G04740 | 31.690 | 142 | 90 | 3 | 26 | 161 | 365 | 505 | 1.83e-12 | 69.7 |
| MS.gene41630.t1 | AT4G04740 | 31.690 | 142 | 90 | 3 | 26 | 161 | 365 | 505 | 1.83e-12 | 69.7 |
| MS.gene41630.t1 | AT4G21940 | 30.556 | 144 | 93 | 3 | 20 | 157 | 392 | 534 | 2.02e-12 | 69.7 |
| MS.gene41630.t1 | AT4G21940 | 30.556 | 144 | 93 | 3 | 20 | 157 | 392 | 534 | 2.03e-12 | 69.7 |
| MS.gene41630.t1 | AT4G04695 | 29.730 | 148 | 97 | 3 | 20 | 161 | 322 | 468 | 6.54e-12 | 68.2 |
| MS.gene41630.t1 | AT3G48850 | 27.237 | 257 | 162 | 9 | 204 | 441 | 66 | 316 | 1.54e-11 | 66.2 |
| MS.gene41630.t1 | AT2G33820 | 23.607 | 305 | 198 | 12 | 203 | 483 | 16 | 309 | 2.27e-11 | 65.5 |
| MS.gene41630.t1 | AT4G27940 | 27.727 | 220 | 128 | 8 | 193 | 387 | 195 | 408 | 3.17e-11 | 65.5 |
| MS.gene41630.t1 | AT5G42130 | 25.094 | 267 | 180 | 8 | 221 | 477 | 134 | 390 | 6.05e-11 | 64.7 |
| MS.gene41630.t1 | AT5G19360 | 31.111 | 135 | 87 | 3 | 28 | 157 | 368 | 501 | 8.38e-11 | 64.7 |
| MS.gene41630.t1 | AT3G05290 | 24.662 | 296 | 184 | 12 | 207 | 476 | 13 | 295 | 8.67e-11 | 63.5 |
Find 109 sgRNAs with CRISPR-Local
Find 215 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTAGGATGTGGGACAATTTC+TGG | 0.159419 | 3.4:-88338891 | MS.gene41630:CDS |
| TTCTTTGATGGAGGGAATAA+TGG | 0.216426 | 3.4:-88341205 | MS.gene41630:CDS |
| TAGAATTTGATTGCACTTTC+CGG | 0.232865 | 3.4:+88339402 | None:intergenic |
| GAACAGTTCCGATGCTTATA+AGG | 0.241893 | 3.4:-88338671 | MS.gene41630:CDS |
| ATCATGAATAATATATTTCT+TGG | 0.252850 | 3.4:+88339059 | None:intergenic |
| GAACCCTCACAAAGAATATA+TGG | 0.303659 | 3.4:-88339191 | MS.gene41630:CDS |
| CAATGAGTTTAGGAGATATA+TGG | 0.307264 | 3.4:-88341062 | MS.gene41630:CDS |
| GGCACAACTTTGAGTAGATT+TGG | 0.313751 | 3.4:+88338580 | None:intergenic |
| AGAGCATCCCAAAGCTCTTC+AGG | 0.318069 | 3.4:+88340971 | None:intergenic |
| TTTCAGCATGAAGGCTTTAG+AGG | 0.319780 | 3.4:-88338622 | MS.gene41630:CDS |
| CAAGGTAACAATTCGGATAT+TGG | 0.324252 | 3.4:-88339342 | MS.gene41630:CDS |
| TATTCTTCCTGAAGAGCTTT+GGG | 0.324433 | 3.4:-88340978 | MS.gene41630:CDS |
| TGATCTAGTGAAATGTTTCT+TGG | 0.329861 | 3.4:+88341292 | None:intergenic |
| TATGGAAGCAAGATAATATA+CGG | 0.336371 | 3.4:-88339467 | MS.gene41630:CDS |
| AGCTGCGAGCATTACTTATA+TGG | 0.341395 | 3.4:-88338557 | MS.gene41630:CDS |
| GCGTGCTTGCTAATGTCTTC+AGG | 0.353904 | 3.4:+88339627 | None:intergenic |
| GGGTTGATTACAATGAGTTT+AGG | 0.355020 | 3.4:-88341072 | MS.gene41630:CDS |
| GGACTTCTTCCGTCTGTGAT+TGG | 0.367551 | 3.4:-88339138 | MS.gene41630:CDS |
| GTATTCTTCCTGAAGAGCTT+TGG | 0.373610 | 3.4:-88340979 | MS.gene41630:CDS |
| AGCTTTGGGATGCTCTTGAT+AGG | 0.382850 | 3.4:-88340964 | MS.gene41630:CDS |
| TTTGTGAGGGTTCCAAGTTT+AGG | 0.385328 | 3.4:+88339201 | None:intergenic |
| TTTCTTGGACATATCTTTCA+AGG | 0.392181 | 3.4:+88339074 | None:intergenic |
| TTTCTGCAGTGACGACAATA+TGG | 0.399931 | 3.4:-88339485 | MS.gene41630:CDS |
| AACAGTTCCGATGCTTATAA+GGG | 0.400067 | 3.4:-88338670 | MS.gene41630:CDS |
| TCTTTGATGGAGGGAATAAT+GGG | 0.407756 | 3.4:-88341204 | MS.gene41630:CDS |
| AATTCGGATATTGGTGCTGC+TGG | 0.411872 | 3.4:-88339333 | MS.gene41630:CDS |
| GATCACGTGCTTGAGGCATT+AGG | 0.419468 | 3.4:-88341274 | MS.gene41630:CDS |
| ATATATGGATGATAAGGAAT+TGG | 0.420302 | 3.4:-88341047 | MS.gene41630:CDS |
| ATCAACCCTACCATCACTAT+TGG | 0.422211 | 3.4:+88341087 | None:intergenic |
| CAATGCTGCAGGAATAGAAA+TGG | 0.442718 | 3.4:-88339826 | MS.gene41630:intron |
| GATCTAGTGAAATGTTTCTT+GGG | 0.443011 | 3.4:+88341293 | None:intergenic |
| ACATTAGCAAGCACGCTAAC+CGG | 0.449483 | 3.4:-88339620 | MS.gene41630:CDS |
| GGTGGAAGGGCTCCTAAACT+TGG | 0.458284 | 3.4:-88339213 | MS.gene41630:CDS |
| TGGGATGCTCTTGATAGGGC+TGG | 0.459417 | 3.4:-88340959 | MS.gene41630:intron |
| TAGGAGATATATGGATGATA+AGG | 0.460917 | 3.4:-88341053 | MS.gene41630:CDS |
| CTTGCATATTTATACTCCGC+TGG | 0.463043 | 3.4:+88341133 | None:intergenic |
| GATTATGTTCAGATAGAGAA+AGG | 0.470841 | 3.4:-88341175 | MS.gene41630:CDS |
| CACGTTGACAAGGACAATAA+TGG | 0.472418 | 3.4:-88339774 | MS.gene41630:CDS |
| TTGAAAATATATATCACCAT+TGG | 0.474683 | 3.4:-88339692 | MS.gene41630:CDS |
| CTCCATCAAAGAAATTGAAA+AGG | 0.478589 | 3.4:+88341215 | None:intergenic |
| GCGAGATCAATGCCAGCATA+AGG | 0.481632 | 3.4:+88339108 | None:intergenic |
| TGAAAATATATATCACCATT+GGG | 0.482057 | 3.4:-88339691 | MS.gene41630:CDS |
| TAGGTGAATCAAAAGAAGAA+AGG | 0.482226 | 3.4:-88341255 | MS.gene41630:CDS |
| AAATATATTATTCATGATAG+TGG | 0.486766 | 3.4:-88339054 | MS.gene41630:intron |
| AGAGGAGCTTGCTCGCTTTG+TGG | 0.489148 | 3.4:-88339799 | MS.gene41630:CDS |
| GGGACAATTTCTGGAACCCT+TGG | 0.491674 | 3.4:-88338882 | MS.gene41630:CDS |
| CTATGGATCTTATCAAAACT+AGG | 0.493639 | 3.4:-88339257 | MS.gene41630:CDS |
| CAGCGATAAAATATTTGCTC+CGG | 0.498497 | 3.4:+88339601 | None:intergenic |
| AGGTGAATCAAAAGAAGAAA+GGG | 0.504788 | 3.4:-88341254 | MS.gene41630:CDS |
| TTTATCGCTGGAGGAATAGC+AGG | 0.510692 | 3.4:-88339588 | MS.gene41630:CDS |
| CACTGCAGGTTATTCGTACT+AGG | 0.514009 | 3.4:-88338842 | MS.gene41630:intron |
| CTTGGTCTCCAATGTCTACA+TGG | 0.514430 | 3.4:+88339658 | None:intergenic |
| ATTATGTTCAGATAGAGAAA+GGG | 0.519083 | 3.4:-88341174 | MS.gene41630:CDS |
| AATCCATATATTCTTTGTGA+GGG | 0.521242 | 3.4:+88339188 | None:intergenic |
| ATTGGCATGATTCCTTATGC+TGG | 0.525188 | 3.4:-88339120 | MS.gene41630:CDS |
| TACATGTGTCTATCCACTGC+AGG | 0.526699 | 3.4:-88338856 | MS.gene41630:CDS |
| CCTAGTTGTACTAGAGGACC+AGG | 0.532372 | 3.4:+88338909 | None:intergenic |
| AGATGCTCAAGGTAACAATT+CGG | 0.534432 | 3.4:-88339349 | MS.gene41630:CDS |
| TGTCTTCAGGAATGACAGCT+TGG | 0.536068 | 3.4:+88339640 | None:intergenic |
| CCTGGTCCTCTAGTACAACT+AGG | 0.536419 | 3.4:-88338909 | MS.gene41630:CDS |
| CCTCTAGTACAACTAGGATG+TGG | 0.538045 | 3.4:-88338903 | MS.gene41630:CDS |
| GCAGACCGCAATCTATCCTA+TGG | 0.541450 | 3.4:-88339274 | MS.gene41630:CDS |
| GCTATTGATGTTGAACATAG+TGG | 0.542144 | 3.4:-88341004 | MS.gene41630:CDS |
| AGGAGCCCTTCCACCTTCAG+AGG | 0.542507 | 3.4:+88339221 | None:intergenic |
| ATATAAGTAATGCTCGCAGC+TGG | 0.542695 | 3.4:+88338559 | None:intergenic |
| ATGGAAGCAAGATAATATAC+GGG | 0.544706 | 3.4:-88339466 | MS.gene41630:CDS |
| GCTTTGGGATGCTCTTGATA+GGG | 0.545989 | 3.4:-88340963 | MS.gene41630:CDS |
| GGCTTTAGAGGTTTCTACAA+AGG | 0.549054 | 3.4:-88338610 | MS.gene41630:CDS |
| GTGATGCCAATAGTGATGGT+AGG | 0.551120 | 3.4:-88341093 | MS.gene41630:CDS |
| AGGAATAGAAATGGATGAAG+AGG | 0.553086 | 3.4:-88339817 | MS.gene41630:CDS |
| CAACTTTGAGTAGATTTGGA+AGG | 0.557888 | 3.4:+88338584 | None:intergenic |
| TGCACCTCTCGATCGTCTGA+AGG | 0.558903 | 3.4:-88339544 | MS.gene41630:CDS |
| CTTGTGCCTCTGAAGGTGGA+AGG | 0.560242 | 3.4:-88339227 | MS.gene41630:CDS |
| CAGACTTGTGCCTCTGAAGG+TGG | 0.565219 | 3.4:-88339231 | MS.gene41630:CDS |
| CTACAGACTTGTGCCTCTGA+AGG | 0.568315 | 3.4:-88339234 | MS.gene41630:CDS |
| TTAGCAGGTGGCGTGGCTGG+TGG | 0.570129 | 3.4:-88339303 | MS.gene41630:CDS |
| TTGTGCCTCTGAAGGTGGAA+GGG | 0.574169 | 3.4:-88339226 | MS.gene41630:CDS |
| CTAGTACGAATAACCTGCAG+TGG | 0.576215 | 3.4:+88338843 | None:intergenic |
| TTCACTAGATCACGTGCTTG+AGG | 0.578433 | 3.4:-88341281 | MS.gene41630:CDS |
| ATTCGGATATTGGTGCTGCT+GGG | 0.584583 | 3.4:-88339332 | MS.gene41630:CDS |
| AAACATTCCCTTATAAGCAT+CGG | 0.584700 | 3.4:+88338663 | None:intergenic |
| GAATCCATATATTCTTTGTG+AGG | 0.586586 | 3.4:+88339187 | None:intergenic |
| AAGAATATATGGATTCAAGA+AGG | 0.587277 | 3.4:-88339180 | MS.gene41630:CDS |
| GAATGTTGTGAAGGTAGCAC+CGG | 0.587546 | 3.4:-88339421 | MS.gene41630:CDS |
| CTTTGTGGAGCACGTTGACA+AGG | 0.587754 | 3.4:-88339784 | MS.gene41630:CDS |
| TGATGCCAATAGTGATGGTA+GGG | 0.593762 | 3.4:-88341092 | MS.gene41630:CDS |
| CAAATCAACACAATGGGTGG+TGG | 0.594305 | 3.4:-88341334 | None:intergenic |
| TTTCAATAGTTGCTTCATGA+GGG | 0.596353 | 3.4:+88339709 | None:intergenic |
| GATAGACACATGTAGCTCCA+AGG | 0.598066 | 3.4:+88338865 | None:intergenic |
| CTCTAGTACAACTAGGATGT+GGG | 0.600264 | 3.4:-88338902 | MS.gene41630:CDS |
| CGGATATTGGTGCTGCTGGG+AGG | 0.600630 | 3.4:-88339329 | MS.gene41630:CDS |
| AAAGTAATTGGAGATGCTCA+AGG | 0.602778 | 3.4:-88339360 | MS.gene41630:CDS |
| AGAGTGTACCATGTAGACAT+TGG | 0.605955 | 3.4:-88339666 | MS.gene41630:CDS |
| AACCAAATCAACACAATGGG+TGG | 0.607177 | 3.4:-88341337 | None:intergenic |
| TAATGGATTGAATGTTGTGA+AGG | 0.610631 | 3.4:-88339430 | MS.gene41630:CDS |
| CAACATTCAATCCATTACCT+CGG | 0.611488 | 3.4:+88339436 | None:intergenic |
| ATCTGCATTGCAAATTCCAG+CGG | 0.612606 | 3.4:-88341149 | MS.gene41630:CDS |
| CCACATCCTAGTTGTACTAG+AGG | 0.616859 | 3.4:+88338903 | None:intergenic |
| CATGGTACACTCTCTCCCAA+TGG | 0.626001 | 3.4:+88339676 | None:intergenic |
| GGAATCATGCCAATCACAGA+CGG | 0.632261 | 3.4:+88339129 | None:intergenic |
| ATAGACACATGTAGCTCCAA+GGG | 0.639088 | 3.4:+88338866 | None:intergenic |
| TCACAGACGGAAGAAGTCCT+CGG | 0.639212 | 3.4:+88339142 | None:intergenic |
| GTTTGTGATGCCAATAGTGA+TGG | 0.647265 | 3.4:-88341097 | MS.gene41630:CDS |
| ACGATCGAGAGGTGCAGTCG+CGG | 0.656594 | 3.4:+88339551 | None:intergenic |
| ATCACCTTCAGACGATCGAG+AGG | 0.659545 | 3.4:+88339540 | None:intergenic |
| GGACCTCGAGCTTTCTACCG+AGG | 0.662290 | 3.4:-88339159 | MS.gene41630:CDS |
| AAGATCCATAGGATAGATTG+CGG | 0.679419 | 3.4:+88339269 | None:intergenic |
| AGTCCTCGGTAGAAAGCTCG+AGG | 0.680432 | 3.4:+88339156 | None:intergenic |
| TGGAAGCAAGATAATATACG+GGG | 0.738439 | 3.4:-88339465 | MS.gene41630:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACTTATACATAATAAATATA+GGG | + | chr3.4:88339349-88339368 | None:intergenic | 10.0% |
| !! | ATTTATTATGTATAAGTATA+GGG | - | chr3.4:88339352-88339371 | MS.gene41630:CDS | 10.0% |
| !! | TACTTATACATAATAAATAT+AGG | + | chr3.4:88339350-88339369 | None:intergenic | 10.0% |
| !! | TATTTATTATGTATAAGTAT+AGG | - | chr3.4:88339351-88339370 | MS.gene41630:CDS | 10.0% |
| !! | AAATATATTATTCATGATAG+TGG | - | chr3.4:88340787-88340806 | MS.gene41630:intron | 15.0% |
| !! | ATCATGAATAATATATTTCT+TGG | + | chr3.4:88340785-88340804 | None:intergenic | 15.0% |
| !! | CTTATACATAATAAATATAG+GGG | + | chr3.4:88339348-88339367 | None:intergenic | 15.0% |
| !! | GTATTTATTCAAAAATAGAA+AGG | - | chr3.4:88339439-88339458 | MS.gene41630:CDS | 15.0% |
| !! | TAGAAATAATTACTTTATGT+AGG | - | chr3.4:88338982-88339001 | MS.gene41630:intron | 15.0% |
| !! | TTATACATAATAAATATAGG+GGG | + | chr3.4:88339347-88339366 | None:intergenic | 15.0% |
| !! | TTTATTATGTATAAGTATAG+GGG | - | chr3.4:88339353-88339372 | MS.gene41630:CDS | 15.0% |
| !!! | AGTATTTAATGATTTTTAAG+AGG | - | chr3.4:88339227-88339246 | MS.gene41630:CDS | 15.0% |
| !!! | GTTTTGTATTTGTTATTTTA+GGG | - | chr3.4:88341091-88341110 | MS.gene41630:CDS | 15.0% |
| !! | ACAATAAAACTTTCACAAAA+AGG | + | chr3.4:88339955-88339974 | None:intergenic | 20.0% |
| !! | GAAATGTTGAAAAAAGTAAT+TGG | - | chr3.4:88340469-88340488 | MS.gene41630:intron | 20.0% |
| !! | TGAAAATATATATCACCATT+GGG | - | chr3.4:88340150-88340169 | MS.gene41630:intron | 20.0% |
| !! | TTGAAAATATATATCACCAT+TGG | - | chr3.4:88340149-88340168 | MS.gene41630:intron | 20.0% |
| !!! | GGTTTTGTATTTGTTATTTT+AGG | - | chr3.4:88341090-88341109 | MS.gene41630:CDS | 20.0% |
| !!! | TGGTTATTTCTTACTATTTT+TGG | - | chr3.4:88338948-88338967 | MS.gene41630:intron | 20.0% |
| !!! | TTACATTTTAATCCTTTTTC+AGG | - | chr3.4:88341130-88341149 | MS.gene41630:CDS | 20.0% |
| ! | AACACAATATAGAATGGAAA+AGG | + | chr3.4:88339845-88339864 | None:intergenic | 25.0% |
| ! | AAGAATATATGGATTCAAGA+AGG | - | chr3.4:88340661-88340680 | MS.gene41630:intron | 25.0% |
| ! | AATCCATATATTCTTTGTGA+GGG | + | chr3.4:88340656-88340675 | None:intergenic | 25.0% |
| ! | ACCAAAAAAGATTAAACTAG+AGG | + | chr3.4:88338932-88338951 | None:intergenic | 25.0% |
| ! | ATATATGGATGATAAGGAAT+TGG | - | chr3.4:88338794-88338813 | MS.gene41630:intron | 25.0% |
| ! | ATGATTCTGATCATTTCATT+TGG | + | chr3.4:88341053-88341072 | None:intergenic | 25.0% |
| ! | ATTATGTTCAGATAGAGAAA+GGG | - | chr3.4:88338667-88338686 | MS.gene41630:CDS | 25.0% |
| ! | GTAAATCAAGCTTGTAATAT+TGG | - | chr3.4:88339648-88339667 | MS.gene41630:CDS | 25.0% |
| ! | GTAACAAACACAATATAGAA+TGG | + | chr3.4:88339851-88339870 | None:intergenic | 25.0% |
| ! | TATGGAAGCAAGATAATATA+CGG | - | chr3.4:88340374-88340393 | MS.gene41630:intron | 25.0% |
| ! | TCTCAACAAATAACTATGAT+GGG | - | chr3.4:88339417-88339436 | MS.gene41630:CDS | 25.0% |
| ! | TGCTTATGATAAATACTATC+AGG | + | chr3.4:88339985-88340004 | None:intergenic | 25.0% |
| ! | TTCTCAACAAATAACTATGA+TGG | - | chr3.4:88339416-88339435 | MS.gene41630:CDS | 25.0% |
| !! | AATGGAAAAGGTATAAACTT+GGG | + | chr3.4:88339833-88339852 | None:intergenic | 25.0% |
| !! | AGTTTAGGATAAATGGAAAT+TGG | - | chr3.4:88339686-88339705 | MS.gene41630:CDS | 25.0% |
| !! | CTTATGTAGTTTAGGATAAA+TGG | - | chr3.4:88339679-88339698 | MS.gene41630:CDS | 25.0% |
| !! | CTTTTAGACTTATGTAGTTT+AGG | - | chr3.4:88339671-88339690 | MS.gene41630:CDS | 25.0% |
| !! | TATATGCTTTGCCTTTTTAA+CGG | - | chr3.4:88339738-88339757 | MS.gene41630:CDS | 25.0% |
| !! | TTGTTACATCTTTGTTTGTT+TGG | - | chr3.4:88339864-88339883 | MS.gene41630:intron | 25.0% |
| !! | TTTTCAATTTCTTTGATGGA+GGG | - | chr3.4:88338628-88338647 | MS.gene41630:CDS | 25.0% |
| !!! | GAAATAGTTTCACTTTTCAA+AGG | + | chr3.4:88340884-88340903 | None:intergenic | 25.0% |
| !!! | TAACTTTTCTACTTTAAGAC+TGG | + | chr3.4:88339068-88339087 | None:intergenic | 25.0% |
| !!! | TAATGATTTTTAAGAGGAGA+TGG | - | chr3.4:88339233-88339252 | MS.gene41630:CDS | 25.0% |
| !!! | TATTATTCATGATAGTGGTA+TGG | - | chr3.4:88340792-88340811 | MS.gene41630:intron | 25.0% |
| !!! | TGTAGGTTGAGTTTTTTATT+AGG | - | chr3.4:88338999-88339018 | MS.gene41630:intron | 25.0% |
| AAACATTCCCTTATAAGCAT+CGG | + | chr3.4:88341181-88341200 | None:intergenic | 30.0% | |
| AAACTAGAGGCAAAACAAAA+AGG | + | chr3.4:88338919-88338938 | None:intergenic | 30.0% | |
| ACATAATAAATATAGGGGGA+GGG | + | chr3.4:88339343-88339362 | None:intergenic | 30.0% | |
| AGGTATGTTTAAATAGCACA+TGG | + | chr3.4:88339465-88339484 | None:intergenic | 30.0% | |
| AGGTGAATCAAAAGAAGAAA+GGG | - | chr3.4:88338587-88338606 | MS.gene41630:CDS | 30.0% | |
| AGTATTGTGGATATTGAAGA+TGG | - | chr3.4:88339925-88339944 | MS.gene41630:intron | 30.0% | |
| ATGGAAGCAAGATAATATAC+GGG | - | chr3.4:88340375-88340394 | MS.gene41630:intron | 30.0% | |
| ATTGAAACATAATTGCAAGG+AGG | - | chr3.4:88339382-88339401 | MS.gene41630:CDS | 30.0% | |
| CAATGAGTTTAGGAGATATA+TGG | - | chr3.4:88338779-88338798 | MS.gene41630:intron | 30.0% | |
| CTATGGATCTTATCAAAACT+AGG | - | chr3.4:88340584-88340603 | MS.gene41630:intron | 30.0% | |
| CTCCATCAAAGAAATTGAAA+AGG | + | chr3.4:88338629-88338648 | None:intergenic | 30.0% | |
| CTGATCATTTCATTTGGATA+AGG | + | chr3.4:88341047-88341066 | None:intergenic | 30.0% | |
| GAAAAGCCAAAGTTTGAATT+CGG | - | chr3.4:88339130-88339149 | MS.gene41630:CDS | 30.0% | |
| GAATCCATATATTCTTTGTG+AGG | + | chr3.4:88340657-88340676 | None:intergenic | 30.0% | |
| GATAAATGGAAATTGGATTG+TGG | - | chr3.4:88339693-88339712 | MS.gene41630:CDS | 30.0% | |
| GATCTAGTGAAATGTTTCTT+GGG | + | chr3.4:88338551-88338570 | None:intergenic | 30.0% | |
| GATTATGTTCAGATAGAGAA+AGG | - | chr3.4:88338666-88338685 | MS.gene41630:CDS | 30.0% | |
| GTGGATTCTATTATTGTGAA+GGG | - | chr3.4:88339712-88339731 | MS.gene41630:CDS | 30.0% | |
| GTTAAAATGTCCCGTTAAAA+AGG | + | chr3.4:88339752-88339771 | None:intergenic | 30.0% | |
| TACATAATAAATATAGGGGG+AGG | + | chr3.4:88339344-88339363 | None:intergenic | 30.0% | |
| TAGAATTTGATTGCACTTTC+CGG | + | chr3.4:88340442-88340461 | None:intergenic | 30.0% | |
| TAGGAGATATATGGATGATA+AGG | - | chr3.4:88338788-88338807 | MS.gene41630:intron | 30.0% | |
| TAGGTGAATCAAAAGAAGAA+AGG | - | chr3.4:88338586-88338605 | MS.gene41630:CDS | 30.0% | |
| TCCTTGCAATTATGTTTCAA+TGG | + | chr3.4:88339383-88339402 | None:intergenic | 30.0% | |
| TGATCTAGTGAAATGTTTCT+TGG | + | chr3.4:88338552-88338571 | None:intergenic | 30.0% | |
| TGTCTTACACAGAATAGTAT+GGG | + | chr3.4:88339297-88339316 | None:intergenic | 30.0% | |
| TGTGGATTCTATTATTGTGA+AGG | - | chr3.4:88339711-88339730 | MS.gene41630:CDS | 30.0% | |
| TTGTCTTACACAGAATAGTA+TGG | + | chr3.4:88339298-88339317 | None:intergenic | 30.0% | |
| TTTCAATAGTTGCTTCATGA+GGG | + | chr3.4:88340135-88340154 | None:intergenic | 30.0% | |
| TTTCTTGGACATATCTTTCA+AGG | + | chr3.4:88340770-88340789 | None:intergenic | 30.0% | |
| ! | AGCCTTTTCAATTTCTTTGA+TGG | - | chr3.4:88338624-88338643 | MS.gene41630:CDS | 30.0% |
| ! | ATATGCTTTGCCTTTTTAAC+GGG | - | chr3.4:88339739-88339758 | MS.gene41630:CDS | 30.0% |
| ! | CTTTTCAATTTCTTTGATGG+AGG | - | chr3.4:88338627-88338646 | MS.gene41630:CDS | 30.0% |
| ! | GAATGGAAAAGGTATAAACT+TGG | + | chr3.4:88339834-88339853 | None:intergenic | 30.0% |
| ! | TTTTCAATAGTTGCTTCATG+AGG | + | chr3.4:88340136-88340155 | None:intergenic | 30.0% |
| !! | GAACTATCACTTTTGAAGAA+TGG | - | chr3.4:88340089-88340108 | MS.gene41630:intron | 30.0% |
| !! | TAATGGATTGAATGTTGTGA+AGG | - | chr3.4:88340411-88340430 | MS.gene41630:intron | 30.0% |
| !! | TCATTTGTGTTTTTCAGAAC+TGG | - | chr3.4:88341069-88341088 | MS.gene41630:CDS | 30.0% |
| !!! | CTAGTTTTGATAAGATCCAT+AGG | + | chr3.4:88340586-88340605 | None:intergenic | 30.0% |
| !!! | GCCTCTAGTTTAATCTTTTT+TGG | - | chr3.4:88338928-88338947 | MS.gene41630:intron | 30.0% |
| AAAGTAATTGGAGATGCTCA+AGG | - | chr3.4:88340481-88340500 | MS.gene41630:intron | 35.0% | |
| AACAGTTCCGATGCTTATAA+GGG | - | chr3.4:88341171-88341190 | MS.gene41630:CDS | 35.0% | |
| AAGATCCATAGGATAGATTG+CGG | + | chr3.4:88340575-88340594 | None:intergenic | 35.0% | |
| AGATGCTCAAGGTAACAATT+CGG | - | chr3.4:88340492-88340511 | MS.gene41630:intron | 35.0% | |
| AGGAATAGAAATGGATGAAG+AGG | - | chr3.4:88340024-88340043 | MS.gene41630:intron | 35.0% | |
| ATTTAAGCACACCTCAAGAA+AGG | + | chr3.4:88339265-88339284 | None:intergenic | 35.0% | |
| CAACATTCAATCCATTACCT+CGG | + | chr3.4:88340408-88340427 | None:intergenic | 35.0% | |
| CAACTTTGAGTAGATTTGGA+AGG | + | chr3.4:88341260-88341279 | None:intergenic | 35.0% | |
| CAAGGTAACAATTCGGATAT+TGG | - | chr3.4:88340499-88340518 | MS.gene41630:intron | 35.0% | |
| CAGCGATAAAATATTTGCTC+CGG | + | chr3.4:88340243-88340262 | None:intergenic | 35.0% | |
| CAGTTAGTCAACATTCTTCA+CGG | + | chr3.4:88339791-88339810 | None:intergenic | 35.0% | |
| CATAATAAATATAGGGGGAG+GGG | + | chr3.4:88339342-88339361 | None:intergenic | 35.0% | |
| GAACCCTCACAAAGAATATA+TGG | - | chr3.4:88340650-88340669 | MS.gene41630:intron | 35.0% | |
| GAATTGAAGAGTGAAGACAT+CGG | + | chr3.4:88339567-88339586 | None:intergenic | 35.0% | |
| GCCATTGAAACATAATTGCA+AGG | - | chr3.4:88339379-88339398 | MS.gene41630:CDS | 35.0% | |
| GCTATTGATGTTGAACATAG+TGG | - | chr3.4:88338837-88338856 | MS.gene41630:intron | 35.0% | |
| TAAACATACCTTCTCACTAG+AGG | - | chr3.4:88339474-88339493 | MS.gene41630:CDS | 35.0% | |
| TATTCTTCCTGAAGAGCTTT+GGG | - | chr3.4:88338863-88338882 | MS.gene41630:CDS | 35.0% | |
| TCTTTGATGGAGGGAATAAT+GGG | - | chr3.4:88338637-88338656 | MS.gene41630:CDS | 35.0% | |
| TGGAAGCAAGATAATATACG+GGG | - | chr3.4:88340376-88340395 | MS.gene41630:intron | 35.0% | |
| TTCTTTGATGGAGGGAATAA+TGG | - | chr3.4:88338636-88338655 | MS.gene41630:CDS | 35.0% | |
| ! | AGCAAATATTTTATCGCTGG+AGG | - | chr3.4:88340244-88340263 | MS.gene41630:intron | 35.0% |
| ! | ATATGCAAGAGAGCTTTTCA+TGG | - | chr3.4:88338722-88338741 | MS.gene41630:intron | 35.0% |
| ! | GAAAAGGTATAAACTTGGGA+AGG | + | chr3.4:88339829-88339848 | None:intergenic | 35.0% |
| ! | GGGTTGATTACAATGAGTTT+AGG | - | chr3.4:88338769-88338788 | MS.gene41630:intron | 35.0% |
| ! | TGTAGAACTTTTCAGCATGA+AGG | - | chr3.4:88341210-88341229 | MS.gene41630:CDS | 35.0% |
| !!! | TTAATCCTTTTTCAGGCTTC+AGG | - | chr3.4:88341137-88341156 | MS.gene41630:CDS | 35.0% |
| !!! | TTACCCAAGTGTTTTTTCCA+CGG | + | chr3.4:88339204-88339223 | None:intergenic | 35.0% |
| AACCAGCCGAATTCAAACTT+TGG | + | chr3.4:88339139-88339158 | None:intergenic | 40.0% | |
| AGAGTGTACCATGTAGACAT+TGG | - | chr3.4:88340175-88340194 | MS.gene41630:intron | 40.0% | |
| AGCTGCGAGCATTACTTATA+TGG | - | chr3.4:88341284-88341303 | MS.gene41630:CDS | 40.0% | |
| ATAGACACATGTAGCTCCAA+GGG | + | chr3.4:88340978-88340997 | None:intergenic | 40.0% | |
| ATATAAGTAATGCTCGCAGC+TGG | + | chr3.4:88341285-88341304 | None:intergenic | 40.0% | |
| ATCAACCCTACCATCACTAT+TGG | + | chr3.4:88338757-88338776 | None:intergenic | 40.0% | |
| ATCTGCATTGCAAATTCCAG+CGG | - | chr3.4:88338692-88338711 | MS.gene41630:CDS | 40.0% | |
| ATTGGCATGATTCCTTATGC+TGG | - | chr3.4:88340721-88340740 | MS.gene41630:intron | 40.0% | |
| CAATATCCACAATACTGCAG+TGG | + | chr3.4:88339921-88339940 | None:intergenic | 40.0% | |
| CAATGCTGCAGGAATAGAAA+TGG | - | chr3.4:88340015-88340034 | MS.gene41630:intron | 40.0% | |
| CACGTTGACAAGGACAATAA+TGG | - | chr3.4:88340067-88340086 | MS.gene41630:intron | 40.0% | |
| CACTCTTCAATTCACTGATC+AGG | - | chr3.4:88339574-88339593 | MS.gene41630:CDS | 40.0% | |
| CTCTAGTACAACTAGGATGT+GGG | - | chr3.4:88340939-88340958 | MS.gene41630:intron | 40.0% | |
| CTTGCATATTTATACTCCGC+TGG | + | chr3.4:88338711-88338730 | None:intergenic | 40.0% | |
| GAACAGTTCCGATGCTTATA+AGG | - | chr3.4:88341170-88341189 | MS.gene41630:CDS | 40.0% | |
| GGCACAACTTTGAGTAGATT+TGG | + | chr3.4:88341264-88341283 | None:intergenic | 40.0% | |
| GTATTCTTCCTGAAGAGCTT+TGG | - | chr3.4:88338862-88338881 | MS.gene41630:CDS | 40.0% | |
| GTTTGTGATGCCAATAGTGA+TGG | - | chr3.4:88338744-88338763 | MS.gene41630:intron | 40.0% | |
| TCACGGATAACTGTTACAAC+TGG | + | chr3.4:88339774-88339793 | None:intergenic | 40.0% | |
| TGATGCCAATAGTGATGGTA+GGG | - | chr3.4:88338749-88338768 | MS.gene41630:intron | 40.0% | |
| TTCGTGTCAGACACTAAATG+TGG | + | chr3.4:88339169-88339188 | None:intergenic | 40.0% | |
| TTTAGTGTCTGACACGAACA+AGG | - | chr3.4:88339171-88339190 | MS.gene41630:CDS | 40.0% | |
| TTTCTGCAGTGACGACAATA+TGG | - | chr3.4:88340356-88340375 | MS.gene41630:intron | 40.0% | |
| TTTGTGAGGGTTCCAAGTTT+AGG | + | chr3.4:88340643-88340662 | None:intergenic | 40.0% | |
| ! | AATATACGGGGATTTTTCCG+AGG | - | chr3.4:88340388-88340407 | MS.gene41630:intron | 40.0% |
| ! | CGGAGCAAATATTTTATCGC+TGG | - | chr3.4:88340241-88340260 | MS.gene41630:intron | 40.0% |
| ! | TTTCAGCATGAAGGCTTTAG+AGG | - | chr3.4:88341219-88341238 | MS.gene41630:CDS | 40.0% |
| !! | GGCTTTAGAGGTTTCTACAA+AGG | - | chr3.4:88341231-88341250 | MS.gene41630:CDS | 40.0% |
| !!! | TACCCAAGTGTTTTTTCCAC+GGG | + | chr3.4:88339203-88339222 | None:intergenic | 40.0% |
| AATAAATATAGGGGGAGGGG+AGG | + | chr3.4:88339339-88339358 | None:intergenic | 45.0% | |
| ACATTAGCAAGCACGCTAAC+CGG | - | chr3.4:88340221-88340240 | MS.gene41630:intron | 45.0% | |
| AGCCAAAGTTTGAATTCGGC+TGG | - | chr3.4:88339134-88339153 | MS.gene41630:CDS | 45.0% | |
| ATAAATATAGGGGGAGGGGA+GGG | + | chr3.4:88339338-88339357 | None:intergenic | 45.0% | |
| ATGAGCAGTTTCAATGCTGC+AGG | - | chr3.4:88340004-88340023 | MS.gene41630:intron | 45.0% | |
| CACTGCAGGTTATTCGTACT+AGG | - | chr3.4:88340999-88341018 | MS.gene41630:CDS | 45.0% | |
| CCACATCCTAGTTGTACTAG+AGG | + | chr3.4:88340941-88340960 | None:intergenic | 45.0% | |
| CCTCTAGTACAACTAGGATG+TGG | - | chr3.4:88340938-88340957 | MS.gene41630:intron | 45.0% | |
| CTAGGATGTGGGACAATTTC+TGG | - | chr3.4:88340950-88340969 | MS.gene41630:intron | 45.0% | |
| CTAGTACGAATAACCTGCAG+TGG | + | chr3.4:88341001-88341020 | None:intergenic | 45.0% | |
| CTCCCGTGGAAAAAACACTT+GGG | - | chr3.4:88339198-88339217 | MS.gene41630:CDS | 45.0% | |
| CTTGGTCTCCAATGTCTACA+TGG | + | chr3.4:88340186-88340205 | None:intergenic | 45.0% | |
| GAATGTTGTGAAGGTAGCAC+CGG | - | chr3.4:88340420-88340439 | MS.gene41630:intron | 45.0% | |
| GATAGACACATGTAGCTCCA+AGG | + | chr3.4:88340979-88340998 | None:intergenic | 45.0% | |
| GGAATCATGCCAATCACAGA+CGG | + | chr3.4:88340715-88340734 | None:intergenic | 45.0% | |
| GTGATGCCAATAGTGATGGT+AGG | - | chr3.4:88338748-88338767 | MS.gene41630:intron | 45.0% | |
| TACATGTGTCTATCCACTGC+AGG | - | chr3.4:88340985-88341004 | MS.gene41630:CDS | 45.0% | |
| TAGAGGACCAGGATCTATGA+AGG | + | chr3.4:88340924-88340943 | None:intergenic | 45.0% | |
| TGTCTTCAGGAATGACAGCT+TGG | + | chr3.4:88340204-88340223 | None:intergenic | 45.0% | |
| TTCACTAGATCACGTGCTTG+AGG | - | chr3.4:88338560-88338579 | MS.gene41630:CDS | 45.0% | |
| TTGTGCCTGAAGCCTGAAAA+AGG | + | chr3.4:88341145-88341164 | None:intergenic | 45.0% | |
| TTTATCGCTGGAGGAATAGC+AGG | - | chr3.4:88340253-88340272 | MS.gene41630:intron | 45.0% | |
| TTTCCCTCCTTCATAGATCC+TGG | - | chr3.4:88340914-88340933 | MS.gene41630:intron | 45.0% | |
| ! | AGTTTGAATTCGGCTGGTTG+AGG | - | chr3.4:88339140-88339159 | MS.gene41630:CDS | 45.0% |
| !! | AATTCGGATATTGGTGCTGC+TGG | - | chr3.4:88340508-88340527 | MS.gene41630:intron | 45.0% |
| !! | AGCTTTGGGATGCTCTTGAT+AGG | - | chr3.4:88338877-88338896 | MS.gene41630:CDS | 45.0% |
| !! | ATTCGGATATTGGTGCTGCT+GGG | - | chr3.4:88340509-88340528 | MS.gene41630:intron | 45.0% |
| !! | GATGGTTCTGACCTTTCTTG+AGG | - | chr3.4:88339251-88339270 | MS.gene41630:CDS | 45.0% |
| !! | GCTTTGGGATGCTCTTGATA+GGG | - | chr3.4:88338878-88338897 | MS.gene41630:CDS | 45.0% |
| !! | TAATAACTTTAAATTAAAAA+GGG | + | chr3.4:88339512-88339531 | None:intergenic | 5.0% |
| !! | TTAATAACTTTAAATTAAAA+AGG | + | chr3.4:88339513-88339532 | None:intergenic | 5.0% |
| AGGACCAGGATCTATGAAGG+AGG | + | chr3.4:88340921-88340940 | None:intergenic | 50.0% | |
| ATCACCTTCAGACGATCGAG+AGG | + | chr3.4:88340304-88340323 | None:intergenic | 50.0% | |
| CATGGTACACTCTCTCCCAA+TGG | + | chr3.4:88340168-88340187 | None:intergenic | 50.0% | |
| CCTAGTTGTACTAGAGGACC+AGG | + | chr3.4:88340935-88340954 | None:intergenic | 50.0% | |
| CCTCCCGTGGAAAAAACACT+TGG | - | chr3.4:88339197-88339216 | MS.gene41630:CDS | 50.0% | |
| CCTGGTCCTCTAGTACAACT+AGG | - | chr3.4:88340932-88340951 | MS.gene41630:intron | 50.0% | |
| CGCATACACCTCTAGTGAGA+AGG | + | chr3.4:88339485-88339504 | None:intergenic | 50.0% | |
| CTACAGACTTGTGCCTCTGA+AGG | - | chr3.4:88340607-88340626 | MS.gene41630:intron | 50.0% | |
| CTCTGACCACTGCAGTATTG+TGG | - | chr3.4:88339912-88339931 | MS.gene41630:intron | 50.0% | |
| CTTTGTGGAGCACGTTGACA+AGG | - | chr3.4:88340057-88340076 | MS.gene41630:intron | 50.0% | |
| GCAGACCGCAATCTATCCTA+TGG | - | chr3.4:88340567-88340586 | MS.gene41630:intron | 50.0% | |
| GCGAGATCAATGCCAGCATA+AGG | + | chr3.4:88340736-88340755 | None:intergenic | 50.0% | |
| GGACCAGGATCTATGAAGGA+GGG | + | chr3.4:88340920-88340939 | None:intergenic | 50.0% | |
| GGACTTCTTCCGTCTGTGAT+TGG | - | chr3.4:88340703-88340722 | MS.gene41630:intron | 50.0% | |
| TCACAGACGGAAGAAGTCCT+CGG | + | chr3.4:88340702-88340721 | None:intergenic | 50.0% | |
| ! | AGAGCATCCCAAAGCTCTTC+AGG | + | chr3.4:88338873-88338892 | None:intergenic | 50.0% |
| ! | CGGGGATTTTTCCGAGGTAA+TGG | - | chr3.4:88340394-88340413 | MS.gene41630:intron | 50.0% |
| ! | GATCACGTGCTTGAGGCATT+AGG | - | chr3.4:88338567-88338586 | MS.gene41630:CDS | 50.0% |
| ! | GCGTGCTTGCTAATGTCTTC+AGG | + | chr3.4:88340217-88340236 | None:intergenic | 50.0% |
| ! | TTGTGCCTCTGAAGGTGGAA+GGG | - | chr3.4:88340615-88340634 | MS.gene41630:intron | 50.0% |
| !! | GGGACAATTTCTGGAACCCT+TGG | - | chr3.4:88340959-88340978 | MS.gene41630:intron | 50.0% |
| !!! | CCAAGTGTTTTTTCCACGGG+AGG | + | chr3.4:88339200-88339219 | None:intergenic | 50.0% |
| ACGAACAAGGTTACCTCCCG+TGG | - | chr3.4:88339184-88339203 | MS.gene41630:CDS | 55.0% | |
| AGTCCTCGGTAGAAAGCTCG+AGG | + | chr3.4:88340688-88340707 | None:intergenic | 55.0% | |
| GGTGGAAGGGCTCCTAAACT+TGG | - | chr3.4:88340628-88340647 | MS.gene41630:intron | 55.0% | |
| TGCACCTCTCGATCGTCTGA+AGG | - | chr3.4:88340297-88340316 | MS.gene41630:intron | 55.0% | |
| TGGGATGCTCTTGATAGGGC+TGG | - | chr3.4:88338882-88338901 | MS.gene41630:CDS | 55.0% | |
| ! | AGAGGAGCTTGCTCGCTTTG+TGG | - | chr3.4:88340042-88340061 | MS.gene41630:intron | 55.0% |
| ! | CAGACTTGTGCCTCTGAAGG+TGG | - | chr3.4:88340610-88340629 | MS.gene41630:intron | 55.0% |
| ! | CTTGTGCCTCTGAAGGTGGA+AGG | - | chr3.4:88340614-88340633 | MS.gene41630:intron | 55.0% |
| AGGAGCCCTTCCACCTTCAG+AGG | + | chr3.4:88340623-88340642 | None:intergenic | 60.0% | |
| GGACCTCGAGCTTTCTACCG+AGG | - | chr3.4:88340682-88340701 | MS.gene41630:intron | 60.0% | |
| GGGAGGGGAGGGAAATTGAG+GGG | + | chr3.4:88339327-88339346 | None:intergenic | 60.0% | |
| GGGGAGGGGAGGGAAATTGA+GGG | + | chr3.4:88339328-88339347 | None:intergenic | 60.0% | |
| ! | ACGATCGAGAGGTGCAGTCG+CGG | + | chr3.4:88340293-88340312 | None:intergenic | 60.0% |
| ! | CTTTTAGCAGGTGGCGTGGC+TGG | - | chr3.4:88340535-88340554 | MS.gene41630:intron | 60.0% |
| ! | GAGGCTTTTAGCAGGTGGCG+TGG | - | chr3.4:88340531-88340550 | MS.gene41630:intron | 60.0% |
| ! | GCTGCTGGGAGGCTTTTAGC+AGG | - | chr3.4:88340523-88340542 | MS.gene41630:intron | 60.0% |
| ! | GCTGGGAGGCTTTTAGCAGG+TGG | - | chr3.4:88340526-88340545 | MS.gene41630:intron | 60.0% |
| !! | CGGATATTGGTGCTGCTGGG+AGG | - | chr3.4:88340512-88340531 | MS.gene41630:intron | 60.0% |
| GGGGGAGGGGAGGGAAATTG+AGG | + | chr3.4:88339329-88339348 | None:intergenic | 65.0% | |
| TTAGCAGGTGGCGTGGCTGG+TGG | - | chr3.4:88340538-88340557 | MS.gene41630:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 88338519 | 88341344 | 88338519 | ID=MS.gene41630 |
| chr3.4 | mRNA | 88338519 | 88341344 | 88338519 | ID=MS.gene41630.t1;Parent=MS.gene41630 |
| chr3.4 | exon | 88340960 | 88341344 | 88340960 | ID=MS.gene41630.t1.exon1;Parent=MS.gene41630.t1 |
| chr3.4 | CDS | 88340960 | 88341344 | 88340960 | ID=cds.MS.gene41630.t1;Parent=MS.gene41630.t1 |
| chr3.4 | exon | 88339055 | 88339837 | 88339055 | ID=MS.gene41630.t1.exon2;Parent=MS.gene41630.t1 |
| chr3.4 | CDS | 88339055 | 88339837 | 88339055 | ID=cds.MS.gene41630.t1;Parent=MS.gene41630.t1 |
| chr3.4 | exon | 88338843 | 88338933 | 88338843 | ID=MS.gene41630.t1.exon3;Parent=MS.gene41630.t1 |
| chr3.4 | CDS | 88338843 | 88338933 | 88338843 | ID=cds.MS.gene41630.t1;Parent=MS.gene41630.t1 |
| chr3.4 | exon | 88338519 | 88338711 | 88338519 | ID=MS.gene41630.t1.exon4;Parent=MS.gene41630.t1 |
| chr3.4 | CDS | 88338519 | 88338711 | 88338519 | ID=cds.MS.gene41630.t1;Parent=MS.gene41630.t1 |
| Gene Sequence |
| Protein sequence |
