Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57725.t1 | RHN64123.1 | 95.7 | 588 | 24 | 1 | 1 | 587 | 8 | 595 | 0.00E+00 | 1200.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57725.t1 | A0A396IHI8 | 95.7 | 588 | 24 | 1 | 1 | 587 | 8 | 595 | 0.0e+00 | 1200.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04915 | MS.gene57725 | 0.818847 | 1.58E-52 | -1.69E-46 |
| MS.gene04917 | MS.gene57725 | 0.814836 | 1.26E-51 | -1.69E-46 |
| MS.gene049887 | MS.gene57725 | 0.812305 | 4.53E-51 | -1.69E-46 |
| MS.gene050361 | MS.gene57725 | 0.80702 | 6.20E-50 | -1.69E-46 |
| MS.gene050629 | MS.gene57725 | -0.815775 | 7.78E-52 | -1.69E-46 |
| MS.gene050762 | MS.gene57725 | 0.852112 | 5.72E-61 | -1.69E-46 |
| MS.gene050763 | MS.gene57725 | 0.851248 | 1.00E-60 | -1.69E-46 |
| MS.gene051631 | MS.gene57725 | -0.834564 | 2.79E-56 | -1.69E-46 |
| MS.gene054379 | MS.gene57725 | 0.837914 | 3.92E-57 | -1.69E-46 |
| MS.gene055469 | MS.gene57725 | 0.808409 | 3.14E-50 | -1.69E-46 |
| MS.gene056181 | MS.gene57725 | 0.806307 | 8.76E-50 | -1.69E-46 |
| MS.gene056390 | MS.gene57725 | 0.811236 | 7.75E-51 | -1.69E-46 |
| MS.gene058638 | MS.gene57725 | 0.824257 | 8.90E-54 | -1.69E-46 |
| MS.gene058639 | MS.gene57725 | 0.832968 | 6.98E-56 | -1.69E-46 |
| MS.gene058758 | MS.gene57725 | 0.809757 | 1.62E-50 | -1.69E-46 |
| MS.gene059171 | MS.gene57725 | 0.801349 | 9.39E-49 | -1.69E-46 |
| MS.gene059725 | MS.gene57725 | 0.803015 | 4.26E-49 | -1.69E-46 |
| MS.gene060563 | MS.gene57725 | 0.832656 | 8.35E-56 | -1.69E-46 |
| MS.gene060869 | MS.gene57725 | 0.835894 | 1.29E-56 | -1.69E-46 |
| MS.gene060870 | MS.gene57725 | 0.819763 | 9.79E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57725.t1 | MTR_4g117300 | 95.578 | 588 | 25 | 1 | 1 | 587 | 8 | 595 | 0.0 | 1157 |
| MS.gene57725.t1 | MTR_4g117290 | 83.276 | 586 | 90 | 5 | 6 | 587 | 1 | 582 | 0.0 | 1007 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57725.t1 | AT3G06150 | 58.970 | 602 | 214 | 6 | 1 | 587 | 11 | 594 | 0.0 | 757 |
| MS.gene57725.t1 | AT5G19060 | 58.010 | 593 | 201 | 7 | 1 | 587 | 1 | 551 | 0.0 | 731 |
Find 126 sgRNAs with CRISPR-Local
Find 154 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATGAAACACAAAACTATTT+AGG | 0.122544 | 8.3:+8933450 | MS.gene57725:CDS |
| GCTGGTGATATACATGAATT+TGG | 0.184454 | 8.3:+8932706 | MS.gene57725:CDS |
| TAACAAGATCAATACTTTCT+AGG | 0.204121 | 8.3:-8932516 | None:intergenic |
| TACTTTGAGACTAGTCTTTC+GGG | 0.215361 | 8.3:+8932778 | MS.gene57725:CDS |
| TTCAATTCATGGGTTGGATT+TGG | 0.264444 | 8.3:+8932657 | MS.gene57725:CDS |
| TATTTGGAATGTTCATTGTT+TGG | 0.286515 | 8.3:+8932296 | MS.gene57725:CDS |
| ATGAAACACAAAACTATTTA+GGG | 0.311969 | 8.3:+8933451 | MS.gene57725:CDS |
| AAATTCATGTCAAATCTTCT+TGG | 0.314866 | 8.3:-8933366 | None:intergenic |
| TCGGGGAAGGCTCGTTGTTT+AGG | 0.315000 | 8.3:+8932748 | MS.gene57725:CDS |
| TTACTTTGAGACTAGTCTTT+CGG | 0.321736 | 8.3:+8932777 | MS.gene57725:CDS |
| AATTGGGTTACTCACTGTTT+TGG | 0.328249 | 8.3:+8932270 | MS.gene57725:CDS |
| TTGAACACCTCCATCTTGTT+AGG | 0.328849 | 8.3:-8933744 | None:intergenic |
| CACCGGTTGCGACTGTATTC+CGG | 0.328927 | 8.3:-8933695 | None:intergenic |
| TTTCAAGCATTGGATGATTC+GGG | 0.335938 | 8.3:+8932730 | MS.gene57725:CDS |
| TCTTTCCACTTCATCTTTGC+CGG | 0.336387 | 8.3:-8933891 | None:intergenic |
| CCTATGCATCAATGGCGAAT+TGG | 0.341195 | 8.3:+8932253 | MS.gene57725:CDS |
| TGATGGTTCGTTAGGAGCTT+TGG | 0.358146 | 8.3:+8933170 | MS.gene57725:CDS |
| TTCATTGTTTGGAGCATTGA+TGG | 0.369520 | 8.3:+8932307 | MS.gene57725:CDS |
| CTATGCATCAATGGCGAATT+GGG | 0.376005 | 8.3:+8932254 | MS.gene57725:CDS |
| TGTAACGATGGAGTTCATTA+TGG | 0.380953 | 8.3:+8933861 | MS.gene57725:CDS |
| AATTCATGTCAAATCTTCTT+GGG | 0.385928 | 8.3:-8933365 | None:intergenic |
| TTATAAACCCCAACAAAATC+AGG | 0.387815 | 8.3:-8932874 | None:intergenic |
| CAAGCATCTTCAATGGTCAT+TGG | 0.387850 | 8.3:+8933427 | MS.gene57725:CDS |
| ACTGTTGAGATTTCAATTCA+TGG | 0.399480 | 8.3:+8932646 | MS.gene57725:CDS |
| TTGCTTTATAGACACTTTGA+AGG | 0.399974 | 8.3:+8932910 | MS.gene57725:CDS |
| CATGGGTTGGATTTGGATGG+TGG | 0.405677 | 8.3:+8932664 | MS.gene57725:CDS |
| CTTTGATTCCTATGCATCAA+TGG | 0.406215 | 8.3:+8932245 | MS.gene57725:CDS |
| AACAGAAACATGGGTATTGT+TGG | 0.411803 | 8.3:-8932461 | None:intergenic |
| CTCGTTCTTGTAGAATCTAA+TGG | 0.420518 | 8.3:-8932986 | None:intergenic |
| ACAGTTTGAGACGGATCGGC+TGG | 0.435016 | 8.3:-8933396 | None:intergenic |
| AGGAATGACGACTGCGTCAT+TGG | 0.438220 | 8.3:+8933090 | MS.gene57725:CDS |
| ACAGAAACATGGGTATTGTT+GGG | 0.439503 | 8.3:-8932460 | None:intergenic |
| GACAGTGAAGCAAAGGGGAT+TGG | 0.439789 | 8.3:+8933653 | MS.gene57725:CDS |
| AGCTTTGGAGAGTAATGGTT+GGG | 0.451236 | 8.3:+8933185 | MS.gene57725:CDS |
| GAAGTTTATGATGCCAGAAA+AGG | 0.452747 | 8.3:+8932216 | None:intergenic |
| AAGTGGAAAGATGGTCAAAT+TGG | 0.455742 | 8.3:+8933903 | MS.gene57725:CDS |
| GCCTTGCAAGTTTGCAACTC+CGG | 0.458232 | 8.3:-8933018 | None:intergenic |
| AAGCAAACGGGCATTGTCTC+CGG | 0.459404 | 8.3:+8933789 | MS.gene57725:CDS |
| TGTATTCAGCTGAGCCTGCT+TGG | 0.460294 | 8.3:+8933235 | MS.gene57725:CDS |
| TAAGAATAATGTTGCAACTT+GGG | 0.464767 | 8.3:+8932537 | MS.gene57725:CDS |
| TACCGGAATACAGTCGCAAC+CGG | 0.466928 | 8.3:+8933693 | MS.gene57725:CDS |
| AAAGGGATGTTTGGTGTGGA+AGG | 0.470735 | 8.3:+8933052 | MS.gene57725:CDS |
| TGCAAATCTCCCTGGTGTGA+TGG | 0.472089 | 8.3:+8933153 | MS.gene57725:CDS |
| ATGGGTTGGATTTGGATGGT+GGG | 0.474251 | 8.3:+8932665 | MS.gene57725:CDS |
| TGAGATTTCAATTCATGGGT+TGG | 0.480857 | 8.3:+8932651 | MS.gene57725:CDS |
| CCCTGGTGTGATGGTTCGTT+AGG | 0.482336 | 8.3:+8933162 | MS.gene57725:CDS |
| GAAGGTGGACAAGGCATGGC+AGG | 0.484946 | 8.3:+8933070 | MS.gene57725:CDS |
| ATTCATGGGTTGGATTTGGA+TGG | 0.486191 | 8.3:+8932661 | MS.gene57725:CDS |
| TTAAGAATAATGTTGCAACT+TGG | 0.489256 | 8.3:+8932536 | MS.gene57725:CDS |
| AACACAAAACTATTTAGGGT+TGG | 0.492713 | 8.3:+8933455 | MS.gene57725:CDS |
| CTGTTGAGATTTCAATTCAT+GGG | 0.496097 | 8.3:+8932647 | MS.gene57725:CDS |
| AAACATGGGTATTGTTGGGT+TGG | 0.502515 | 8.3:-8932456 | None:intergenic |
| CGGATTACAAGCATCTTCAA+TGG | 0.504600 | 8.3:+8933420 | MS.gene57725:CDS |
| GAGTTCATGATCACAGTGTC+TGG | 0.509501 | 8.3:-8933540 | None:intergenic |
| GGGATGTTTGGTGTGGAAGG+TGG | 0.512214 | 8.3:+8933055 | MS.gene57725:CDS |
| TTCTTCAAGCAATTCCAAGC+AGG | 0.512350 | 8.3:-8933249 | None:intergenic |
| CCGATCCGTCTCAAACTGTT+CGG | 0.518681 | 8.3:+8933400 | MS.gene57725:CDS |
| GGCATTTAATCCTAACAAGA+TGG | 0.519571 | 8.3:+8933734 | MS.gene57725:CDS |
| CGATCATAAACAAATCTCCA+TGG | 0.520523 | 8.3:-8932946 | None:intergenic |
| CCAATTCGCCATTGATGCAT+AGG | 0.528740 | 8.3:-8932253 | None:intergenic |
| TTTAGCTAGATGGTTAGCTA+AGG | 0.529987 | 8.3:+8932597 | MS.gene57725:CDS |
| CTTGGGACAGAATGTACCTC+AGG | 0.530333 | 8.3:-8933348 | None:intergenic |
| GAGATTTGTTTATGATCGAA+TGG | 0.531989 | 8.3:+8932951 | MS.gene57725:CDS |
| TTAGGAGCTTTGGAGAGTAA+TGG | 0.533923 | 8.3:+8933180 | MS.gene57725:CDS |
| GTATTCCGGTAAAACACTCT+TGG | 0.534539 | 8.3:-8933681 | None:intergenic |
| GGGAAGGCTCGTTGTTTAGG+TGG | 0.534981 | 8.3:+8932751 | MS.gene57725:CDS |
| TTAGCTAGATGGTTAGCTAA+GGG | 0.535190 | 8.3:+8932598 | MS.gene57725:CDS |
| TGTGAAAGATTAAAAGTAGG+AGG | 0.536517 | 8.3:-8932397 | None:intergenic |
| GATCATAAACAAATCTCCAT+GGG | 0.537397 | 8.3:-8932945 | None:intergenic |
| AACAAGATGGAGGTGTTCAA+TGG | 0.543709 | 8.3:+8933747 | MS.gene57725:CDS |
| TCCTAACGAACCATCACACC+AGG | 0.544571 | 8.3:-8933163 | None:intergenic |
| CAGTTTGAGACGGATCGGCT+GGG | 0.544793 | 8.3:-8933395 | None:intergenic |
| ATGCTCGTACACTACGAAAG+TGG | 0.550418 | 8.3:-8933581 | None:intergenic |
| GGAATTGCTTGAAGAATCGA+TGG | 0.552764 | 8.3:+8933256 | MS.gene57725:CDS |
| GCAAAGATGAAGTGGAAAGA+TGG | 0.553104 | 8.3:+8933894 | MS.gene57725:CDS |
| AAGGTTTGAAGTTTACCCCA+TGG | 0.558490 | 8.3:+8932929 | MS.gene57725:CDS |
| ACGATGGAGTTCATTATGGA+AGG | 0.561120 | 8.3:+8933865 | MS.gene57725:CDS |
| CGGTGGATATGCAAGATCAC+TGG | 0.568207 | 8.3:+8933713 | MS.gene57725:CDS |
| GAGCTTTGGAGAGTAATGGT+TGG | 0.569229 | 8.3:+8933184 | MS.gene57725:CDS |
| TGATGTGAAAGATTAAAAGT+AGG | 0.572976 | 8.3:-8932400 | None:intergenic |
| TTATGAAGACAGTGAAGCAA+AGG | 0.574920 | 8.3:+8933646 | MS.gene57725:CDS |
| TATGAAGACAGTGAAGCAAA+GGG | 0.575325 | 8.3:+8933647 | MS.gene57725:CDS |
| ACAGTCTTAGAATCTTTACA+AGG | 0.577996 | 8.3:-8932628 | None:intergenic |
| ACCGGAGTTGCAAACTTGCA+AGG | 0.578553 | 8.3:+8933017 | MS.gene57725:CDS |
| GACACTGTGATCATGAACTC+TGG | 0.580265 | 8.3:+8933543 | MS.gene57725:CDS |
| ATCGTGGAAATCTAGACCGT+TGG | 0.580576 | 8.3:+8932804 | MS.gene57725:CDS |
| CGATGGAGTTCATTATGGAA+GGG | 0.582766 | 8.3:+8933866 | MS.gene57725:CDS |
| AGCATTGGATGATTCGGGGA+AGG | 0.584401 | 8.3:+8932735 | MS.gene57725:CDS |
| AGTTTGATTGAGTTATCAGC+TGG | 0.585869 | 8.3:+8932688 | MS.gene57725:CDS |
| GGGCTCCGGCAAAGATGAAG+TGG | 0.588980 | 8.3:+8933886 | MS.gene57725:CDS |
| AGTTCATTATGGAAGGGCTC+CGG | 0.589216 | 8.3:+8933872 | MS.gene57725:CDS |
| GTAGATACCGATGCCTAGCA+TGG | 0.591261 | 8.3:+8933121 | MS.gene57725:CDS |
| CAGTGATCTTGCATATCCAC+CGG | 0.591430 | 8.3:-8933712 | None:intergenic |
| ATGAACTCTGGCTTGCATGA+CGG | 0.591911 | 8.3:+8933555 | MS.gene57725:CDS |
| AGTGTACGAGCATTCTCTGC+GGG | 0.593570 | 8.3:+8933591 | MS.gene57725:CDS |
| TGCAAGGAAAATCCCATGCT+AGG | 0.595420 | 8.3:-8933134 | None:intergenic |
| AAGTAACATTAACAGAAACA+TGG | 0.596059 | 8.3:-8932471 | None:intergenic |
| TTTGAAAGGGATGTTTGGTG+TGG | 0.597726 | 8.3:+8933048 | MS.gene57725:CDS |
| GTTGGATTCACTAAAAGATG+AGG | 0.598512 | 8.3:+8933473 | MS.gene57725:CDS |
| TTGCTAAAATCTTTCACCAA+CGG | 0.600940 | 8.3:-8932820 | None:intergenic |
| GAAAATCCCATGCTAGGCAT+CGG | 0.602023 | 8.3:-8933128 | None:intergenic |
| CCGAACAGTTTGAGACGGAT+CGG | 0.604067 | 8.3:-8933400 | None:intergenic |
| TGTGGAAGGTGGACAAGGCA+TGG | 0.606494 | 8.3:+8933066 | MS.gene57725:CDS |
| TTGGATTCACTAAAAGATGA+GGG | 0.607104 | 8.3:+8933474 | MS.gene57725:CDS |
| CGGAATACAGTCGCAACCGG+TGG | 0.612333 | 8.3:+8933696 | MS.gene57725:CDS |
| AGTAACATTAACAGAAACAT+GGG | 0.614298 | 8.3:-8932470 | None:intergenic |
| AATGAACTCCATCGTTACAT+CGG | 0.624481 | 8.3:-8933857 | None:intergenic |
| TTTGATAACCGATGTAACGA+TGG | 0.632430 | 8.3:+8933849 | MS.gene57725:CDS |
| ACTTTGAGACTAGTCTTTCG+GGG | 0.632502 | 8.3:+8932779 | MS.gene57725:CDS |
| GTAATCCGAACAGTTTGAGA+CGG | 0.632768 | 8.3:-8933405 | None:intergenic |
| TTTGGTGTGGAAGGTGGACA+AGG | 0.634168 | 8.3:+8933061 | MS.gene57725:CDS |
| CTTTGAGACTAGTCTTTCGG+GGG | 0.635092 | 8.3:+8932780 | MS.gene57725:CDS |
| GACTGCGTCATTGGTAATGA+CGG | 0.635228 | 8.3:+8933099 | MS.gene57725:CDS |
| CATTAGATTCTACAAGAACG+AGG | 0.635476 | 8.3:+8932987 | MS.gene57725:CDS |
| GCTAGATGGTTAGCTAAGGG+AGG | 0.635774 | 8.3:+8932601 | MS.gene57725:CDS |
| TAGATACCGATGCCTAGCAT+GGG | 0.637333 | 8.3:+8933122 | MS.gene57725:CDS |
| TCACACCAGGGAGATTTGCA+AGG | 0.652518 | 8.3:-8933150 | None:intergenic |
| ATCAAAGTTATCAATCACGC+CGG | 0.659408 | 8.3:-8933808 | None:intergenic |
| ACTTTGATATGACATTTCCG+TGG | 0.660837 | 8.3:+8933823 | MS.gene57725:CDS |
| TTCAAGCATTGGATGATTCG+GGG | 0.666148 | 8.3:+8932731 | MS.gene57725:CDS |
| CATCGGTTATCAAAATGCCA+CGG | 0.669856 | 8.3:-8933840 | None:intergenic |
| ATTTAATCCTAACAAGATGG+AGG | 0.674342 | 8.3:+8933737 | MS.gene57725:CDS |
| ATCATAAACAAATCTCCATG+GGG | 0.703316 | 8.3:-8932944 | None:intergenic |
| TAGTGTACGAGCATTCTCTG+CGG | 0.712569 | 8.3:+8933590 | MS.gene57725:CDS |
| ATGAAGACAGTGAAGCAAAG+GGG | 0.716034 | 8.3:+8933648 | MS.gene57725:CDS |
| CCTAACGAACCATCACACCA+GGG | 0.735089 | 8.3:-8933162 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATGAAACACAAAACTATTT+AGG | + | chr8.3:8933450-8933469 | MS.gene57725:CDS | 20.0% |
| !! | ATGAAACACAAAACTATTTA+GGG | + | chr8.3:8933451-8933470 | MS.gene57725:CDS | 20.0% |
| !!! | TTTTGATCTTCTAAACTAAT+AGG | - | chr8.3:8932436-8932455 | None:intergenic | 20.0% |
| ! | AAATTCATGTCAAATCTTCT+TGG | - | chr8.3:8933369-8933388 | None:intergenic | 25.0% |
| ! | AAGTAACATTAACAGAAACA+TGG | - | chr8.3:8932474-8932493 | None:intergenic | 25.0% |
| ! | AATTCATGTCAAATCTTCTT+GGG | - | chr8.3:8933368-8933387 | None:intergenic | 25.0% |
| ! | AGTAACATTAACAGAAACAT+GGG | - | chr8.3:8932473-8932492 | None:intergenic | 25.0% |
| ! | CTTAGAAAAACTAAAGCAAA+CGG | + | chr8.3:8933776-8933795 | MS.gene57725:CDS | 25.0% |
| ! | TAACAAGATCAATACTTTCT+AGG | - | chr8.3:8932519-8932538 | None:intergenic | 25.0% |
| ! | TAAGAATAATGTTGCAACTT+GGG | + | chr8.3:8932537-8932556 | MS.gene57725:CDS | 25.0% |
| ! | TGATGTGAAAGATTAAAAGT+AGG | - | chr8.3:8932403-8932422 | None:intergenic | 25.0% |
| ! | TTAAGAATAATGTTGCAACT+TGG | + | chr8.3:8932536-8932555 | MS.gene57725:CDS | 25.0% |
| ! | TTAGAAAAACTAAAGCAAAC+GGG | + | chr8.3:8933777-8933796 | MS.gene57725:CDS | 25.0% |
| !! | AATTGGTCATGAATATTTTG+TGG | + | chr8.3:8933920-8933939 | MS.gene57725:CDS | 25.0% |
| !! | ACTGTTAAGAATGTTTTTCA+AGG | + | chr8.3:8932334-8932353 | MS.gene57725:CDS | 25.0% |
| !! | TATTTGGAATGTTCATTGTT+TGG | + | chr8.3:8932296-8932315 | MS.gene57725:CDS | 25.0% |
| !!! | AGAATGTTTTTCAAGGTTTA+AGG | + | chr8.3:8932341-8932360 | MS.gene57725:CDS | 25.0% |
| !!! | TTTTATTTTAGATTTGCCTG+AGG | + | chr8.3:8933332-8933351 | MS.gene57725:CDS | 25.0% |
| ACAGTCTTAGAATCTTTACA+AGG | - | chr8.3:8932631-8932650 | None:intergenic | 30.0% | |
| ACTGTTGAGATTTCAATTCA+TGG | + | chr8.3:8932646-8932665 | MS.gene57725:CDS | 30.0% | |
| ATCATAAACAAATCTCCATG+GGG | - | chr8.3:8932947-8932966 | None:intergenic | 30.0% | |
| ATTTAATCCTAACAAGATGG+AGG | + | chr8.3:8933737-8933756 | MS.gene57725:CDS | 30.0% | |
| CTGTTGAGATTTCAATTCAT+GGG | + | chr8.3:8932647-8932666 | MS.gene57725:CDS | 30.0% | |
| GATCATAAACAAATCTCCAT+GGG | - | chr8.3:8932948-8932967 | None:intergenic | 30.0% | |
| TGTGAAAGATTAAAAGTAGG+AGG | - | chr8.3:8932400-8932419 | None:intergenic | 30.0% | |
| TTATAAACCCCAACAAAATC+AGG | - | chr8.3:8932877-8932896 | None:intergenic | 30.0% | |
| TTGCTAAAATCTTTCACCAA+CGG | - | chr8.3:8932823-8932842 | None:intergenic | 30.0% | |
| TTGCTTTATAGACACTTTGA+AGG | + | chr8.3:8932910-8932929 | MS.gene57725:CDS | 30.0% | |
| TTGGATTCACTAAAAGATGA+GGG | + | chr8.3:8933474-8933493 | MS.gene57725:CDS | 30.0% | |
| ! | AACACAAAACTATTTAGGGT+TGG | + | chr8.3:8933455-8933474 | MS.gene57725:CDS | 30.0% |
| ! | AAGTTCATCCTGATTTTGTT+GGG | + | chr8.3:8932866-8932885 | MS.gene57725:CDS | 30.0% |
| ! | ATCAAAGTTACAACCTTTTC+TGG | - | chr8.3:8932232-8932251 | None:intergenic | 30.0% |
| ! | GAGATTTGTTTATGATCGAA+TGG | + | chr8.3:8932951-8932970 | MS.gene57725:CDS | 30.0% |
| !! | CTTCAAATCTTTTAGCTAGA+TGG | + | chr8.3:8932587-8932606 | MS.gene57725:CDS | 30.0% |
| !! | TTACTTTGAGACTAGTCTTT+CGG | + | chr8.3:8932777-8932796 | MS.gene57725:CDS | 30.0% |
| !! | TTGGTGAAAGATTTTAGCAA+TGG | + | chr8.3:8932823-8932842 | MS.gene57725:CDS | 30.0% |
| !!! | TGAATTTGGTTTTCAAGCAT+TGG | + | chr8.3:8932720-8932739 | MS.gene57725:CDS | 30.0% |
| !!! | TTTTCAAGCATTGGATGATT+CGG | + | chr8.3:8932729-8932748 | MS.gene57725:CDS | 30.0% |
| AAGTGGAAAGATGGTCAAAT+TGG | + | chr8.3:8933903-8933922 | MS.gene57725:CDS | 35.0% | |
| AATGAACTCCATCGTTACAT+CGG | - | chr8.3:8933860-8933879 | None:intergenic | 35.0% | |
| ACTTTGATATGACATTTCCG+TGG | + | chr8.3:8933823-8933842 | MS.gene57725:CDS | 35.0% | |
| AGTTTGATTGAGTTATCAGC+TGG | + | chr8.3:8932688-8932707 | MS.gene57725:CDS | 35.0% | |
| ATCAAAGTTATCAATCACGC+CGG | - | chr8.3:8933811-8933830 | None:intergenic | 35.0% | |
| CATTAGATTCTACAAGAACG+AGG | + | chr8.3:8932987-8933006 | MS.gene57725:CDS | 35.0% | |
| CGATCATAAACAAATCTCCA+TGG | - | chr8.3:8932949-8932968 | None:intergenic | 35.0% | |
| CTCGTTCTTGTAGAATCTAA+TGG | - | chr8.3:8932989-8933008 | None:intergenic | 35.0% | |
| CTTTGATTCCTATGCATCAA+TGG | + | chr8.3:8932245-8932264 | MS.gene57725:CDS | 35.0% | |
| GCTGGTGATATACATGAATT+TGG | + | chr8.3:8932706-8932725 | MS.gene57725:CDS | 35.0% | |
| GGCATTTAATCCTAACAAGA+TGG | + | chr8.3:8933734-8933753 | MS.gene57725:CDS | 35.0% | |
| GTTGGATTCACTAAAAGATG+AGG | + | chr8.3:8933473-8933492 | MS.gene57725:CDS | 35.0% | |
| TATGAAGACAGTGAAGCAAA+GGG | + | chr8.3:8933647-8933666 | MS.gene57725:CDS | 35.0% | |
| TGAGATTTCAATTCATGGGT+TGG | + | chr8.3:8932651-8932670 | MS.gene57725:CDS | 35.0% | |
| TGTAACGATGGAGTTCATTA+TGG | + | chr8.3:8933861-8933880 | MS.gene57725:CDS | 35.0% | |
| TTATGAAGACAGTGAAGCAA+AGG | + | chr8.3:8933646-8933665 | MS.gene57725:CDS | 35.0% | |
| ! | AACAGAAACATGGGTATTGT+TGG | - | chr8.3:8932464-8932483 | None:intergenic | 35.0% |
| ! | AATTGGGTTACTCACTGTTT+TGG | + | chr8.3:8932270-8932289 | MS.gene57725:CDS | 35.0% |
| ! | ACAGAAACATGGGTATTGTT+GGG | - | chr8.3:8932463-8932482 | None:intergenic | 35.0% |
| ! | AGACTATGCAGCATCTTTTT+GGG | + | chr8.3:8933617-8933636 | MS.gene57725:CDS | 35.0% |
| ! | AGTTCATCCTGATTTTGTTG+GGG | + | chr8.3:8932867-8932886 | MS.gene57725:CDS | 35.0% |
| ! | CAAGTTCATCCTGATTTTGT+TGG | + | chr8.3:8932865-8932884 | MS.gene57725:CDS | 35.0% |
| ! | TTAGCTAGATGGTTAGCTAA+GGG | + | chr8.3:8932598-8932617 | MS.gene57725:CDS | 35.0% |
| ! | TTTAGCTAGATGGTTAGCTA+AGG | + | chr8.3:8932597-8932616 | MS.gene57725:CDS | 35.0% |
| ! | TTTGATAACCGATGTAACGA+TGG | + | chr8.3:8933849-8933868 | MS.gene57725:CDS | 35.0% |
| !! | AATCGATGGATTTTCTTCTG+GGG | + | chr8.3:8933270-8933289 | MS.gene57725:CDS | 35.0% |
| !! | AGAATCGATGGATTTTCTTC+TGG | + | chr8.3:8933268-8933287 | MS.gene57725:CDS | 35.0% |
| !! | CTGATTTTGAAAGGGATGTT+TGG | + | chr8.3:8933043-8933062 | MS.gene57725:CDS | 35.0% |
| !! | GAATCGATGGATTTTCTTCT+GGG | + | chr8.3:8933269-8933288 | MS.gene57725:CDS | 35.0% |
| !! | TACTTTGAGACTAGTCTTTC+GGG | + | chr8.3:8932778-8932797 | MS.gene57725:CDS | 35.0% |
| !! | TTCAATTCATGGGTTGGATT+TGG | + | chr8.3:8932657-8932676 | MS.gene57725:CDS | 35.0% |
| !! | TTCATTGTTTGGAGCATTGA+TGG | + | chr8.3:8932307-8932326 | MS.gene57725:CDS | 35.0% |
| !! | TTTCAAGCATTGGATGATTC+GGG | + | chr8.3:8932730-8932749 | MS.gene57725:CDS | 35.0% |
| !!! | CTCACTGTTTTGGTTCTATT+TGG | + | chr8.3:8932280-8932299 | MS.gene57725:CDS | 35.0% |
| ACGATGGAGTTCATTATGGA+AGG | + | chr8.3:8933865-8933884 | MS.gene57725:CDS | 40.0% | |
| ATGAAGACAGTGAAGCAAAG+GGG | + | chr8.3:8933648-8933667 | MS.gene57725:CDS | 40.0% | |
| CAAGCATCTTCAATGGTCAT+TGG | + | chr8.3:8933427-8933446 | MS.gene57725:CDS | 40.0% | |
| CGATGGAGTTCATTATGGAA+GGG | + | chr8.3:8933866-8933885 | MS.gene57725:CDS | 40.0% | |
| CGGATTACAAGCATCTTCAA+TGG | + | chr8.3:8933420-8933439 | MS.gene57725:CDS | 40.0% | |
| CTATGCATCAATGGCGAATT+GGG | + | chr8.3:8932254-8932273 | MS.gene57725:CDS | 40.0% | |
| GCAAAGATGAAGTGGAAAGA+TGG | + | chr8.3:8933894-8933913 | MS.gene57725:CDS | 40.0% | |
| GGAATTGCTTGAAGAATCGA+TGG | + | chr8.3:8933256-8933275 | MS.gene57725:CDS | 40.0% | |
| GTAATCCGAACAGTTTGAGA+CGG | - | chr8.3:8933408-8933427 | None:intergenic | 40.0% | |
| GTATTCCGGTAAAACACTCT+TGG | - | chr8.3:8933684-8933703 | None:intergenic | 40.0% | |
| TCTTTCCACTTCATCTTTGC+CGG | - | chr8.3:8933894-8933913 | None:intergenic | 40.0% | |
| TTCTTCAAGCAATTCCAAGC+AGG | - | chr8.3:8933252-8933271 | None:intergenic | 40.0% | |
| TTGAACACCTCCATCTTGTT+AGG | - | chr8.3:8933747-8933766 | None:intergenic | 40.0% | |
| ! | AAACATGGGTATTGTTGGGT+TGG | - | chr8.3:8932459-8932478 | None:intergenic | 40.0% |
| ! | AAGGTTTGAAGTTTACCCCA+TGG | + | chr8.3:8932929-8932948 | MS.gene57725:CDS | 40.0% |
| ! | ATTTTCCTTGCAAATCTCCC+TGG | + | chr8.3:8933145-8933164 | MS.gene57725:CDS | 40.0% |
| ! | CAAGAACGAGGTTTTCATAC+CGG | + | chr8.3:8932999-8933018 | MS.gene57725:CDS | 40.0% |
| ! | CAGACTATGCAGCATCTTTT+TGG | + | chr8.3:8933616-8933635 | MS.gene57725:CDS | 40.0% |
| ! | CATCGGTTATCAAAATGCCA+CGG | - | chr8.3:8933843-8933862 | None:intergenic | 40.0% |
| ! | TTTGAAAGGGATGTTTGGTG+TGG | + | chr8.3:8933048-8933067 | MS.gene57725:CDS | 40.0% |
| !! | AACAAGATGGAGGTGTTCAA+TGG | + | chr8.3:8933747-8933766 | MS.gene57725:CDS | 40.0% |
| !! | ACTTTGAGACTAGTCTTTCG+GGG | + | chr8.3:8932779-8932798 | MS.gene57725:CDS | 40.0% |
| !! | AGCTTTGGAGAGTAATGGTT+GGG | + | chr8.3:8933185-8933204 | MS.gene57725:CDS | 40.0% |
| !! | ATTCATGGGTTGGATTTGGA+TGG | + | chr8.3:8932661-8932680 | MS.gene57725:CDS | 40.0% |
| !! | TTAGGAGCTTTGGAGAGTAA+TGG | + | chr8.3:8933180-8933199 | MS.gene57725:CDS | 40.0% |
| !! | TTCAAGCATTGGATGATTCG+GGG | + | chr8.3:8932731-8932750 | MS.gene57725:CDS | 40.0% |
| !!! | CAAGGCTGCTGATTTTGAAA+GGG | + | chr8.3:8933035-8933054 | MS.gene57725:CDS | 40.0% |
| AGTTCATTATGGAAGGGCTC+CGG | + | chr8.3:8933872-8933891 | MS.gene57725:CDS | 45.0% | |
| ATCGTGGAAATCTAGACCGT+TGG | + | chr8.3:8932804-8932823 | MS.gene57725:CDS | 45.0% | |
| ATGCTCGTACACTACGAAAG+TGG | - | chr8.3:8933584-8933603 | None:intergenic | 45.0% | |
| CAGTGATCTTGCATATCCAC+CGG | - | chr8.3:8933715-8933734 | None:intergenic | 45.0% | |
| CCAATTCGCCATTGATGCAT+AGG | - | chr8.3:8932256-8932275 | None:intergenic | 45.0% | |
| CCTATGCATCAATGGCGAAT+TGG | + | chr8.3:8932253-8932272 | MS.gene57725:CDS | 45.0% | |
| GAAAATCCCATGCTAGGCAT+CGG | - | chr8.3:8933131-8933150 | None:intergenic | 45.0% | |
| GACACTGTGATCATGAACTC+TGG | + | chr8.3:8933543-8933562 | MS.gene57725:CDS | 45.0% | |
| GAGTTCATGATCACAGTGTC+TGG | - | chr8.3:8933543-8933562 | None:intergenic | 45.0% | |
| TAGATACCGATGCCTAGCAT+GGG | + | chr8.3:8933122-8933141 | MS.gene57725:CDS | 45.0% | |
| TAGTGTACGAGCATTCTCTG+CGG | + | chr8.3:8933590-8933609 | MS.gene57725:CDS | 45.0% | |
| TGATGGTTCGTTAGGAGCTT+TGG | + | chr8.3:8933170-8933189 | MS.gene57725:CDS | 45.0% | |
| TGCAAGGAAAATCCCATGCT+AGG | - | chr8.3:8933137-8933156 | None:intergenic | 45.0% | |
| ! | ATGAACTCTGGCTTGCATGA+CGG | + | chr8.3:8933555-8933574 | MS.gene57725:CDS | 45.0% |
| !! | AAAGGGATGTTTGGTGTGGA+AGG | + | chr8.3:8933052-8933071 | MS.gene57725:CDS | 45.0% |
| !! | ATGGGTTGGATTTGGATGGT+GGG | + | chr8.3:8932665-8932684 | MS.gene57725:CDS | 45.0% |
| !! | CTTTGAGACTAGTCTTTCGG+GGG | + | chr8.3:8932780-8932799 | MS.gene57725:CDS | 45.0% |
| !! | GACTGCGTCATTGGTAATGA+CGG | + | chr8.3:8933099-8933118 | MS.gene57725:CDS | 45.0% |
| !! | GAGCTTTGGAGAGTAATGGT+TGG | + | chr8.3:8933184-8933203 | MS.gene57725:CDS | 45.0% |
| !! | TATGCAGCATCTTTTTGGGC+AGG | + | chr8.3:8933621-8933640 | MS.gene57725:CDS | 45.0% |
| !!! | CACTGCCAAGAGTGTTTTAC+CGG | + | chr8.3:8933676-8933695 | MS.gene57725:CDS | 45.0% |
| !!! | GCAAGGCTGCTGATTTTGAA+AGG | + | chr8.3:8933034-8933053 | MS.gene57725:CDS | 45.0% |
| ACCGGAGTTGCAAACTTGCA+AGG | + | chr8.3:8933017-8933036 | MS.gene57725:CDS | 50.0% | |
| AGGAATGACGACTGCGTCAT+TGG | + | chr8.3:8933090-8933109 | MS.gene57725:CDS | 50.0% | |
| AGTGTACGAGCATTCTCTGC+GGG | + | chr8.3:8933591-8933610 | MS.gene57725:CDS | 50.0% | |
| CCGATCCGTCTCAAACTGTT+CGG | + | chr8.3:8933400-8933419 | MS.gene57725:CDS | 50.0% | |
| CCTAACGAACCATCACACCA+GGG | - | chr8.3:8933165-8933184 | None:intergenic | 50.0% | |
| CGGTGGATATGCAAGATCAC+TGG | + | chr8.3:8933713-8933732 | MS.gene57725:CDS | 50.0% | |
| CTTGGGACAGAATGTACCTC+AGG | - | chr8.3:8933351-8933370 | None:intergenic | 50.0% | |
| GACAGTGAAGCAAAGGGGAT+TGG | + | chr8.3:8933653-8933672 | MS.gene57725:CDS | 50.0% | |
| GCCTTGCAAGTTTGCAACTC+CGG | - | chr8.3:8933021-8933040 | None:intergenic | 50.0% | |
| GTAGATACCGATGCCTAGCA+TGG | + | chr8.3:8933121-8933140 | MS.gene57725:CDS | 50.0% | |
| TACCGGAATACAGTCGCAAC+CGG | + | chr8.3:8933693-8933712 | MS.gene57725:CDS | 50.0% | |
| TCACACCAGGGAGATTTGCA+AGG | - | chr8.3:8933153-8933172 | None:intergenic | 50.0% | |
| TCCTAACGAACCATCACACC+AGG | - | chr8.3:8933166-8933185 | None:intergenic | 50.0% | |
| TGCAAATCTCCCTGGTGTGA+TGG | + | chr8.3:8933153-8933172 | MS.gene57725:CDS | 50.0% | |
| TGTATTCAGCTGAGCCTGCT+TGG | + | chr8.3:8933235-8933254 | MS.gene57725:CDS | 50.0% | |
| ! | AAGCAAACGGGCATTGTCTC+CGG | + | chr8.3:8933789-8933808 | MS.gene57725:CDS | 50.0% |
| ! | AGCATTGGATGATTCGGGGA+AGG | + | chr8.3:8932735-8932754 | MS.gene57725:CDS | 50.0% |
| ! | CCGAACAGTTTGAGACGGAT+CGG | - | chr8.3:8933403-8933422 | None:intergenic | 50.0% |
| ! | GCTAGATGGTTAGCTAAGGG+AGG | + | chr8.3:8932601-8932620 | MS.gene57725:CDS | 50.0% |
| ! | TTTGGTGTGGAAGGTGGACA+AGG | + | chr8.3:8933061-8933080 | MS.gene57725:CDS | 50.0% |
| !! | CATGGGTTGGATTTGGATGG+TGG | + | chr8.3:8932664-8932683 | MS.gene57725:CDS | 50.0% |
| CCCTGGTGTGATGGTTCGTT+AGG | + | chr8.3:8933162-8933181 | MS.gene57725:CDS | 55.0% | |
| GGGAAGGCTCGTTGTTTAGG+TGG | + | chr8.3:8932751-8932770 | MS.gene57725:CDS | 55.0% | |
| TCGGGGAAGGCTCGTTGTTT+AGG | + | chr8.3:8932748-8932767 | MS.gene57725:CDS | 55.0% | |
| TGTGGAAGGTGGACAAGGCA+TGG | + | chr8.3:8933066-8933085 | MS.gene57725:CDS | 55.0% | |
| ! | ACAGTTTGAGACGGATCGGC+TGG | - | chr8.3:8933399-8933418 | None:intergenic | 55.0% |
| ! | CACCGGTTGCGACTGTATTC+CGG | - | chr8.3:8933698-8933717 | None:intergenic | 55.0% |
| ! | CAGTTTGAGACGGATCGGCT+GGG | - | chr8.3:8933398-8933417 | None:intergenic | 55.0% |
| ! | CTAGTCTTTCGGGGGAATCG+TGG | + | chr8.3:8932788-8932807 | MS.gene57725:CDS | 55.0% |
| !! | GGGATGTTTGGTGTGGAAGG+TGG | + | chr8.3:8933055-8933074 | MS.gene57725:CDS | 55.0% |
| CGGAATACAGTCGCAACCGG+TGG | + | chr8.3:8933696-8933715 | MS.gene57725:CDS | 60.0% | |
| GAAGGTGGACAAGGCATGGC+AGG | + | chr8.3:8933070-8933089 | MS.gene57725:CDS | 60.0% | |
| GGGCTCCGGCAAAGATGAAG+TGG | + | chr8.3:8933886-8933905 | MS.gene57725:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 8932226 | 8933989 | 8932226 | ID=MS.gene57725 |
| chr8.3 | mRNA | 8932226 | 8933989 | 8932226 | ID=MS.gene57725.t1;Parent=MS.gene57725 |
| chr8.3 | exon | 8932226 | 8933989 | 8932226 | ID=MS.gene57725.t1.exon1;Parent=MS.gene57725.t1 |
| chr8.3 | CDS | 8932226 | 8933989 | 8932226 | ID=cds.MS.gene57725.t1;Parent=MS.gene57725.t1 |
| Gene Sequence |
| Protein sequence |
