AlfalfaGEDB | MS.gene056390

M. sativa cultivar XinJiangDaYe / MS.gene056390

KEGG: -
GO: GO:0003674 GO:0003824 GO:0004175 GO:0004252 GO:0005575 GO:0008233 GO:0008236 GO:0016021 GO:0016787 GO:0016825 GO:0017171 GO:0031224 GO:0070011 GO:0110165 GO:0140096
PFAM: PF01694.25

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene056390.t1	XP_013456312.1	98.5	201	3	0	1	201	71	271	1.80E-101	378.6

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene056390.t1	Q9M1B5	82.1	201	34	1	1	201	71	269	6.8e-86	318.2

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene056390.t1	A0A072UMR9	98.5	201	3	0	1	201	71	271	1.3e-101	378.6

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049142	MS.gene056390	0.830832	2.35E-55	-1.69E-46
MS.gene049350	MS.gene056390	0.802048	6.75E-49	-1.69E-46
MS.gene050654	MS.gene056390	0.830054	3.64E-55	-1.69E-46
MS.gene050838	MS.gene056390	0.804263	2.35E-49	-1.69E-46
MS.gene051102	MS.gene056390	0.811638	6.33E-51	-1.69E-46
MS.gene051975	MS.gene056390	0.804813	1.80E-49	-1.69E-46
MS.gene052307	MS.gene056390	0.814466	1.52E-51	-1.69E-46
MS.gene052335	MS.gene056390	0.80074	1.25E-48	-1.69E-46
MS.gene052463	MS.gene056390	0.836129	1.12E-56	-1.69E-46
MS.gene052609	MS.gene056390	0.810965	8.87E-51	-1.69E-46
MS.gene053058	MS.gene056390	0.800549	1.37E-48	-1.69E-46
MS.gene055311	MS.gene056390	0.832429	9.50E-56	-1.69E-46
MS.gene055313	MS.gene056390	0.834678	2.61E-56	-1.69E-46
MS.gene055469	MS.gene056390	0.813683	2.26E-51	-1.69E-46
MS.gene055513	MS.gene056390	0.846646	1.91E-59	-1.69E-46
MS.gene055864	MS.gene056390	0.814597	1.42E-51	-1.69E-46
MS.gene056181	MS.gene056390	0.819835	9.43E-53	-1.69E-46
MS.gene056308	MS.gene056390	0.813188	2.91E-51	-1.69E-46
MS.gene056390	MS.gene058639	0.800366	1.49E-48	-1.69E-46
MS.gene056390	MS.gene058758	0.83358	4.92E-56	-1.69E-46
MS.gene056390	MS.gene059171	0.808447	3.08E-50	-1.69E-46
MS.gene056390	MS.gene059965	0.824076	9.82E-54	-1.69E-46
MS.gene056390	MS.gene060932	0.808652	2.79E-50	-1.69E-46
MS.gene056390	MS.gene06133	0.824532	7.67E-54	-1.69E-46
MS.gene056390	MS.gene061707	0.809211	2.12E-50	-1.69E-46
MS.gene056390	MS.gene061878	0.802816	4.69E-49	-1.69E-46
MS.gene056390	MS.gene061966	0.813051	3.11E-51	-1.69E-46
MS.gene056390	MS.gene062321	0.825225	5.26E-54	-1.69E-46
MS.gene056390	MS.gene06238	0.836323	1.00E-56	-1.69E-46
MS.gene056390	MS.gene062770	0.812398	4.33E-51	-1.69E-46
MS.gene056390	MS.gene06322	0.818063	2.38E-52	-1.69E-46
MS.gene056390	MS.gene06324	0.833909	4.07E-56	-1.69E-46
MS.gene056390	MS.gene063856	0.804978	1.67E-49	-1.69E-46
MS.gene056390	MS.gene064243	0.821368	4.19E-53	-1.69E-46
MS.gene056390	MS.gene064336	0.81587	7.41E-52	-1.69E-46
MS.gene056390	MS.gene065159	0.800861	1.18E-48	-1.69E-46
MS.gene056390	MS.gene065593	0.816782	4.63E-52	-1.69E-46
MS.gene056390	MS.gene06561	0.804995	1.65E-49	-1.69E-46
MS.gene056390	MS.gene066063	0.800308	1.53E-48	-1.69E-46
MS.gene056390	MS.gene066405	0.802006	6.88E-49	-1.69E-46
MS.gene056390	MS.gene067812	0.801316	9.54E-49	-1.69E-46
MS.gene056390	MS.gene068327	0.800159	1.64E-48	-1.69E-46
MS.gene056390	MS.gene069690	0.817501	3.19E-52	-1.69E-46
MS.gene056390	MS.gene06998	0.826676	2.38E-54	-1.69E-46
MS.gene056390	MS.gene070244	0.801533	8.61E-49	-1.69E-46
MS.gene056390	MS.gene072116	0.822792	1.96E-53	-1.69E-46
MS.gene056390	MS.gene072328	0.813296	2.75E-51	-1.69E-46
MS.gene056390	MS.gene072329	0.819019	1.45E-52	-1.69E-46
MS.gene056390	MS.gene072641	0.814952	1.19E-51	-1.69E-46
MS.gene056390	MS.gene072740	0.80584	1.10E-49	-1.69E-46
MS.gene056390	MS.gene072822	0.804992	1.66E-49	-1.69E-46
MS.gene056390	MS.gene073132	0.840264	9.65E-58	-1.69E-46
MS.gene056390	MS.gene073258	0.802856	4.60E-49	-1.69E-46
MS.gene056390	MS.gene07339	0.806003	1.02E-49	-1.69E-46
MS.gene056390	MS.gene07372	0.813129	2.99E-51	-1.69E-46
MS.gene056390	MS.gene08922	0.815224	1.03E-51	-1.69E-46
MS.gene056390	MS.gene20077	0.81189	5.58E-51	-1.69E-46
MS.gene056390	MS.gene20554	0.811244	7.71E-51	-1.69E-46
MS.gene056390	MS.gene20621	0.802864	4.58E-49	-1.69E-46
MS.gene056390	MS.gene20886	0.824939	6.15E-54	-1.69E-46
MS.gene056390	MS.gene20985	0.8051	1.57E-49	-1.69E-46
MS.gene056390	MS.gene21103	0.819158	1.35E-52	-1.69E-46
MS.gene056390	MS.gene21105	0.818678	1.73E-52	-1.69E-46
MS.gene056390	MS.gene21107	0.820936	5.27E-53	-1.69E-46
MS.gene056390	MS.gene22361	0.802893	4.52E-49	-1.69E-46
MS.gene056390	MS.gene22769	-0.803574	3.27E-49	-1.69E-46
MS.gene056390	MS.gene23060	0.800653	1.30E-48	-1.69E-46
MS.gene056390	MS.gene23513	0.814859	1.24E-51	-1.69E-46
MS.gene056390	MS.gene23697	0.802492	5.47E-49	-1.69E-46
MS.gene056390	MS.gene23935	0.824896	6.30E-54	-1.69E-46
MS.gene056390	MS.gene23963	0.804241	2.37E-49	-1.69E-46
MS.gene056390	MS.gene24076	0.827104	1.88E-54	-1.69E-46
MS.gene056390	MS.gene24633	0.832797	7.70E-56	-1.69E-46
MS.gene056390	MS.gene24903	0.825671	4.13E-54	-1.69E-46
MS.gene056390	MS.gene24907	0.819414	1.18E-52	-1.69E-46
MS.gene056390	MS.gene25109	0.809905	1.50E-50	-1.69E-46
MS.gene056390	MS.gene25174	0.806411	8.34E-50	-1.69E-46
MS.gene056390	MS.gene25469	0.814489	1.50E-51	-1.69E-46
MS.gene056390	MS.gene25471	0.817999	2.46E-52	-1.69E-46
MS.gene056390	MS.gene26396	0.812591	3.93E-51	-1.69E-46
MS.gene056390	MS.gene27401	0.81536	9.62E-52	-1.69E-46
MS.gene056390	MS.gene28632	0.809379	1.95E-50	-1.69E-46
MS.gene056390	MS.gene28924	0.813793	2.14E-51	-1.69E-46
MS.gene056390	MS.gene28979	0.824423	8.14E-54	-1.69E-46
MS.gene056390	MS.gene29233	0.826689	2.36E-54	-1.69E-46
MS.gene056390	MS.gene30419	0.804651	1.95E-49	-1.69E-46
MS.gene056390	MS.gene31650	0.801873	7.33E-49	-1.69E-46
MS.gene056390	MS.gene32043	0.808306	3.31E-50	-1.69E-46
MS.gene056390	MS.gene32653	0.83609	1.15E-56	-1.69E-46
MS.gene056390	MS.gene32688	0.817214	3.70E-52	-1.69E-46
MS.gene056390	MS.gene33135	0.835851	1.32E-56	-1.69E-46
MS.gene056390	MS.gene33177	0.805193	1.50E-49	-1.69E-46
MS.gene056390	MS.gene33466	0.809461	1.87E-50	-1.69E-46
MS.gene056390	MS.gene34453	0.811674	6.22E-51	-1.69E-46
MS.gene056390	MS.gene34485	0.808726	2.69E-50	-1.69E-46
MS.gene056390	MS.gene34691	0.802695	4.97E-49	-1.69E-46
MS.gene056390	MS.gene34950	0.809582	1.76E-50	-1.69E-46
MS.gene056390	MS.gene35034	0.806898	6.58E-50	-1.69E-46
MS.gene056390	MS.gene35323	0.822002	2.99E-53	-1.69E-46
MS.gene056390	MS.gene35789	0.808568	2.91E-50	-1.69E-46
MS.gene056390	MS.gene35934	0.812552	4.00E-51	-1.69E-46
MS.gene056390	MS.gene36289	0.812862	3.42E-51	-1.69E-46
MS.gene056390	MS.gene36325	0.800031	1.74E-48	-1.69E-46
MS.gene056390	MS.gene37876	0.841535	4.48E-58	-1.69E-46
MS.gene056390	MS.gene38378	0.808602	2.86E-50	-1.69E-46
MS.gene056390	MS.gene38568	0.804583	2.02E-49	-1.69E-46
MS.gene056390	MS.gene39046	0.804002	2.66E-49	-1.69E-46
MS.gene056390	MS.gene39124	0.803846	2.87E-49	-1.69E-46
MS.gene056390	MS.gene39143	0.834692	2.59E-56	-1.69E-46
MS.gene056390	MS.gene39314	0.800552	1.37E-48	-1.69E-46
MS.gene056390	MS.gene39529	0.81345	2.54E-51	-1.69E-46
MS.gene056390	MS.gene40220	0.826433	2.72E-54	-1.69E-46
MS.gene056390	MS.gene40748	0.806553	7.78E-50	-1.69E-46
MS.gene056390	MS.gene40969	0.830605	2.67E-55	-1.69E-46
MS.gene056390	MS.gene41088	0.817865	2.64E-52	-1.69E-46
MS.gene056390	MS.gene41395	0.813229	2.84E-51	-1.69E-46
MS.gene056390	MS.gene41427	0.823144	1.62E-53	-1.69E-46
MS.gene056390	MS.gene41678	0.838053	3.61E-57	-1.69E-46
MS.gene056390	MS.gene41681	0.80954	1.80E-50	-1.69E-46
MS.gene056390	MS.gene41757	0.818559	1.84E-52	-1.69E-46
MS.gene056390	MS.gene42653	0.812366	4.40E-51	-1.69E-46
MS.gene056390	MS.gene43202	0.821057	4.94E-53	-1.69E-46
MS.gene056390	MS.gene44001	0.807645	4.57E-50	-1.69E-46
MS.gene056390	MS.gene44326	0.832912	7.21E-56	-1.69E-46
MS.gene056390	MS.gene44427	0.812982	3.22E-51	-1.69E-46
MS.gene056390	MS.gene44631	0.808204	3.47E-50	-1.69E-46
MS.gene056390	MS.gene44795	0.813997	1.93E-51	-1.69E-46
MS.gene056390	MS.gene44967	0.800506	1.40E-48	-1.69E-46
MS.gene056390	MS.gene44969	0.802878	4.55E-49	-1.69E-46
MS.gene056390	MS.gene45281	0.841005	6.18E-58	-1.69E-46
MS.gene056390	MS.gene45624	0.826902	2.10E-54	-1.69E-46
MS.gene056390	MS.gene47554	0.8151	1.10E-51	-1.69E-46
MS.gene056390	MS.gene47581	0.817385	3.39E-52	-1.69E-46
MS.gene056390	MS.gene47601	0.803031	4.23E-49	-1.69E-46
MS.gene056390	MS.gene47747	0.819628	1.05E-52	-1.69E-46
MS.gene056390	MS.gene47822	0.836035	1.18E-56	-1.69E-46
MS.gene056390	MS.gene48283	0.818346	2.06E-52	-1.69E-46
MS.gene056390	MS.gene49082	0.817784	2.75E-52	-1.69E-46
MS.gene056390	MS.gene49282	0.808874	2.50E-50	-1.69E-46
MS.gene056390	MS.gene49288	0.808212	3.46E-50	-1.69E-46
MS.gene056390	MS.gene49423	0.814353	1.61E-51	-1.69E-46
MS.gene056390	MS.gene49426	0.804079	2.57E-49	-1.69E-46
MS.gene056390	MS.gene49467	0.818799	1.62E-52	-1.69E-46
MS.gene056390	MS.gene49883	0.823693	1.21E-53	-1.69E-46
MS.gene056390	MS.gene50005	0.809794	1.59E-50	-1.69E-46
MS.gene056390	MS.gene50037	0.807542	4.80E-50	-1.69E-46
MS.gene056390	MS.gene50636	0.80545	1.33E-49	-1.69E-46
MS.gene056390	MS.gene51028	0.805985	1.02E-49	-1.69E-46
MS.gene056390	MS.gene51029	0.803336	3.66E-49	-1.69E-46
MS.gene056390	MS.gene51384	0.827815	1.27E-54	-1.69E-46
MS.gene056390	MS.gene51704	0.805676	1.19E-49	-1.69E-46
MS.gene056390	MS.gene51789	0.816147	6.43E-52	-1.69E-46
MS.gene056390	MS.gene51985	0.803753	3.00E-49	-1.69E-46
MS.gene056390	MS.gene52605	0.816488	5.39E-52	-1.69E-46
MS.gene056390	MS.gene52610	0.818382	2.02E-52	-1.69E-46
MS.gene056390	MS.gene53552	0.821693	3.53E-53	-1.69E-46
MS.gene056390	MS.gene53600	0.818889	1.55E-52	-1.69E-46
MS.gene056390	MS.gene53825	0.803023	4.25E-49	-1.69E-46
MS.gene056390	MS.gene54045	0.805314	1.42E-49	-1.69E-46
MS.gene056390	MS.gene54220	0.808937	2.42E-50	-1.69E-46
MS.gene056390	MS.gene54280	0.81892	1.52E-52	-1.69E-46
MS.gene056390	MS.gene54547	0.821865	3.22E-53	-1.69E-46
MS.gene056390	MS.gene54548	0.803333	3.67E-49	-1.69E-46
MS.gene056390	MS.gene54967	0.832247	1.05E-55	-1.69E-46
MS.gene056390	MS.gene55530	0.825576	4.35E-54	-1.69E-46
MS.gene056390	MS.gene55653	0.801279	9.71E-49	-1.69E-46
MS.gene056390	MS.gene56476	0.83104	2.09E-55	-1.69E-46
MS.gene056390	MS.gene56510	0.854797	9.69E-62	-1.69E-46
MS.gene056390	MS.gene56565	0.852842	3.54E-61	-1.69E-46
MS.gene056390	MS.gene56742	0.822981	1.77E-53	-1.69E-46
MS.gene056390	MS.gene57576	0.81668	4.88E-52	-1.69E-46
MS.gene056390	MS.gene57725	0.811236	7.75E-51	-1.69E-46
MS.gene056390	MS.gene58134	0.826161	3.16E-54	-1.69E-46
MS.gene056390	MS.gene58486	-0.818022	2.43E-52	-1.69E-46
MS.gene056390	MS.gene59241	0.809257	2.07E-50	-1.69E-46
MS.gene056390	MS.gene59366	0.824924	6.20E-54	-1.69E-46
MS.gene056390	MS.gene59775	0.82336	1.44E-53	-1.69E-46
MS.gene056390	MS.gene60144	0.824522	7.71E-54	-1.69E-46
MS.gene056390	MS.gene60163	0.813446	2.55E-51	-1.69E-46
MS.gene056390	MS.gene60304	0.803388	3.57E-49	-1.69E-46
MS.gene056390	MS.gene60565	0.812223	4.72E-51	-1.69E-46
MS.gene056390	MS.gene61739	0.805004	1.65E-49	-1.69E-46
MS.gene056390	MS.gene62423	0.814584	1.43E-51	-1.69E-46
MS.gene056390	MS.gene62806	0.839035	2.02E-57	-1.69E-46
MS.gene056390	MS.gene62924	0.813745	2.19E-51	-1.69E-46
MS.gene056390	MS.gene63395	0.804376	2.23E-49	-1.69E-46
MS.gene056390	MS.gene63961	0.814841	1.25E-51	-1.69E-46
MS.gene056390	MS.gene65300	0.809095	2.24E-50	-1.69E-46
MS.gene056390	MS.gene65478	0.800574	1.35E-48	-1.69E-46
MS.gene056390	MS.gene66928	0.801853	7.40E-49	-1.69E-46
MS.gene056390	MS.gene66975	0.822785	1.97E-53	-1.69E-46
MS.gene056390	MS.gene67553	0.80888	2.49E-50	-1.69E-46
MS.gene056390	MS.gene67881	0.819854	9.33E-53	-1.69E-46
MS.gene056390	MS.gene68106	0.812722	3.67E-51	-1.69E-46
MS.gene056390	MS.gene68204	0.803989	2.68E-49	-1.69E-46
MS.gene056390	MS.gene69097	0.817469	3.25E-52	-1.69E-46
MS.gene056390	MS.gene69993	0.800244	1.58E-48	-1.69E-46
MS.gene056390	MS.gene70282	0.8485	5.89E-60	-1.69E-46
MS.gene056390	MS.gene71994	0.814011	1.91E-51	-1.69E-46
MS.gene056390	MS.gene72986	0.83822	3.27E-57	-1.69E-46
MS.gene056390	MS.gene74537	0.806479	8.06E-50	-1.69E-46
MS.gene056390	MS.gene74606	0.819232	1.29E-52	-1.69E-46
MS.gene056390	MS.gene74900	0.807468	4.98E-50	-1.69E-46
MS.gene056390	MS.gene74972	0.804601	2.00E-49	-1.69E-46
MS.gene056390	MS.gene75412	0.807125	5.89E-50	-1.69E-46
MS.gene056390	MS.gene75413	0.811994	5.30E-51	-1.69E-46
MS.gene056390	MS.gene75719	0.813122	3.00E-51	-1.69E-46
MS.gene056390	MS.gene77759	0.804035	2.62E-49	-1.69E-46
MS.gene056390	MS.gene79120	0.807457	5.01E-50	-1.69E-46
MS.gene056390	MS.gene79280	0.801359	9.35E-49	-1.69E-46
MS.gene056390	MS.gene79543	0.804181	2.44E-49	-1.69E-46
MS.gene056390	MS.gene80201	0.811449	6.96E-51	-1.69E-46
MS.gene056390	MS.gene80205	0.80282	4.68E-49	-1.69E-46
MS.gene056390	MS.gene80816	0.805304	1.42E-49	-1.69E-46
MS.gene056390	MS.gene82600	0.813939	1.99E-51	-1.69E-46
MS.gene056390	MS.gene82839	0.801965	7.02E-49	-1.69E-46
MS.gene056390	MS.gene82989	0.817604	3.03E-52	-1.69E-46
MS.gene056390	MS.gene84498	0.803417	3.52E-49	-1.69E-46
MS.gene056390	MS.gene85610	0.811738	6.03E-51	-1.69E-46
MS.gene056390	MS.gene86140	0.800608	1.33E-48	-1.69E-46
MS.gene056390	MS.gene86527	0.807864	4.10E-50	-1.69E-46
MS.gene056390	MS.gene86931	0.810411	1.17E-50	-1.69E-46
MS.gene056390	MS.gene87358	0.824269	8.85E-54	-1.69E-46
MS.gene056390	MS.gene87622	0.82232	2.52E-53	-1.69E-46
MS.gene056390	MS.gene87922	0.810039	1.41E-50	-1.69E-46
MS.gene056390	MS.gene87972	0.806883	6.63E-50	-1.69E-46
MS.gene056390	MS.gene88231	0.800865	1.18E-48	-1.69E-46
MS.gene056390	MS.gene88927	0.841418	4.81E-58	-1.69E-46
MS.gene056390	MS.gene89985	0.831797	1.36E-55	-1.69E-46
MS.gene056390	MS.gene91307	0.806428	8.26E-50	-1.69E-46
MS.gene056390	MS.gene92390	0.818856	1.58E-52	-1.69E-46
MS.gene056390	MS.gene93204	0.838111	3.49E-57	-1.69E-46
MS.gene056390	MS.gene94068	0.800203	1.61E-48	-1.69E-46
MS.gene056390	MS.gene95235	0.839067	1.98E-57	-1.69E-46
MS.gene056390	MS.gene95562	0.807403	5.14E-50	-1.69E-46
MS.gene056390	MS.gene96190	0.806928	6.48E-50	-1.69E-46
MS.gene056390	MS.gene96191	0.826517	2.60E-54	-1.69E-46
MS.gene056390	MS.gene97030	0.801228	9.94E-49	-1.69E-46
MS.gene056390	MS.gene97459	0.810088	1.37E-50	-1.69E-46
MS.gene056390	MS.gene98990	0.805714	1.17E-49	-1.69E-46
MS.gene056390	MS.gene99533	0.80368	3.11E-49	-1.69E-46
MS.gene056390	MS.gene99942	0.807301	5.41E-50	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene056390.t1	MTR_4g067340	98.507	201	3	0	1	201	71	271	3.05e-140	392

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene056390.t1	AT3G59520	82.090	201	34	1	1	201	71	269	1.17e-114	327

Find 42 sgRNAs with CRISPR-Local

Find 54 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTACTGGGCACTTACCTTAT+TGG	0.205224	4.1:-33965397	MS.gene056390:CDS
TACTGGGCACTTACCTTATT+GGG	0.220182	4.1:-33965396	MS.gene056390:CDS
TCTTCCAAGTTGGAGCTCTT+TGG	0.276633	4.1:-33965567	MS.gene056390:CDS
GGTGGTTGTATCCGGGGTTT+TGG	0.310982	4.1:-33965712	MS.gene056390:CDS
CTTGTGTTGGTGGTTGTATC+CGG	0.344944	4.1:-33965720	MS.gene056390:CDS
TTCATGGGATGACTAATTAC+TGG	0.352877	4.1:-33965413	MS.gene056390:CDS
TGAGTGCACTTTGGAGTCTT+GGG	0.365778	4.1:-33965800	MS.gene056390:CDS
TCAAACGGAGCAAAACTAAT+AGG	0.372282	4.1:+33965531	None:intergenic
ATAGCTTGGGGTTTGATTCA+TGG	0.377631	4.1:-33965429	MS.gene056390:CDS
TGTTGGATATGCTATAGCTT+GGG	0.379122	4.1:-33965442	MS.gene056390:CDS
AAGAACAATCCAACCCAATA+AGG	0.380469	4.1:+33965383	None:intergenic
CACTTCGATTATTGTTCCTC+AGG	0.392946	4.1:-33965496	MS.gene056390:CDS
TAGCTTGGGGTTTGATTCAT+GGG	0.402889	4.1:-33965428	MS.gene056390:CDS
CTGGCAATGCACTCATCTGC+AGG	0.403334	4.1:+33965241	None:intergenic
CATTTATCTGGGATTGTTGT+TGG	0.403713	4.1:-33965459	MS.gene056390:CDS
ATGAGTGCACTTTGGAGTCT+TGG	0.411154	4.1:-33965801	MS.gene056390:CDS
TCTTGGGGTTGTAGAGCAAT+TGG	0.420492	4.1:-33965784	MS.gene056390:CDS
TTGTGTTGGTGGTTGTATCC+GGG	0.423966	4.1:-33965719	MS.gene056390:CDS
CTTGTTGATTCAAAGATTCA+AGG	0.430998	4.1:-33965673	MS.gene056390:CDS
GGGCACTTACCTTATTGGGT+TGG	0.473467	4.1:-33965392	MS.gene056390:CDS
TTTCGTCGAGTGACGGCTGT+TGG	0.482713	4.1:-33965642	MS.gene056390:CDS
GCAGTATACACTTGTGTTGG+TGG	0.485085	4.1:-33965730	MS.gene056390:CDS
TTGTTGGATATGCTATAGCT+TGG	0.497279	4.1:-33965443	MS.gene056390:CDS
ACAATGTCAACATTTCCATC+TGG	0.497361	4.1:+33965222	None:intergenic
AAATCCAAAGAGCTCCAACT+TGG	0.500176	4.1:+33965563	None:intergenic
GAAGCAACCTTCTTCCAAGT+TGG	0.503075	4.1:-33965577	MS.gene056390:CDS
CAATTGGATCATGTTGGCCT+TGG	0.510981	4.1:-33965768	MS.gene056390:CDS
AATCGCACAGACGGTAATGA+AGG	0.514515	4.1:+33965288	None:intergenic
AAGAGCTCCAACTTGGAAGA+AGG	0.537007	4.1:+33965570	None:intergenic
TCATGGGATGACTAATTACT+GGG	0.568103	4.1:-33965412	MS.gene056390:CDS
GTGAAAATAAGCGATTCAAA+CGG	0.570383	4.1:+33965516	None:intergenic
GTTGGATATGCTATAGCTTG+GGG	0.574371	4.1:-33965441	MS.gene056390:CDS
GAGTGCACTTTGGAGTCTTG+GGG	0.582155	4.1:-33965799	MS.gene056390:CDS
CACAGACGGTAATGAAGGAT+CGG	0.600871	4.1:+33965293	None:intergenic
TGGCAATGCACTCATCTGCA+GGG	0.609281	4.1:+33965242	None:intergenic
TTTGCAGTATACACTTGTGT+TGG	0.612877	4.1:-33965733	MS.gene056390:CDS
CAGATGAGTGCATTGCCAGA+TGG	0.613817	4.1:-33965237	MS.gene056390:CDS
GTAGAGCAATTGGATCATGT+TGG	0.632439	4.1:-33965774	MS.gene056390:CDS
GCAAATAATACTCGACACCA+AGG	0.639015	4.1:+33965751	None:intergenic
TGTGTTGGTGGTTGTATCCG+GGG	0.653479	4.1:-33965718	MS.gene056390:CDS
CATTGCCAGAACCAAAACCC+CGG	0.701359	4.1:+33965701	None:intergenic
TGTCCAATAAAACTTGCCTG+AGG	0.704440	4.1:+33965480	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	AGTTTTATTGGACATTTATC+TGG	-	chr4.1:33965548-33965567	MS.gene056390:CDS	25.0%
!!!	GTTTTATTGGACATTTATCT+GGG	-	chr4.1:33965549-33965568	MS.gene056390:CDS	25.0%
	GTGAAAATAAGCGATTCAAA+CGG	+	chr4.1:33965506-33965525	None:intergenic	30.0%
!!	CTTGTTGATTCAAAGATTCA+AGG	-	chr4.1:33965346-33965365	MS.gene056390:CDS	30.0%
!!!	GTTTTGAGTTTGAAGAAATC+TGG	-	chr4.1:33965665-33965684	MS.gene056390:CDS	30.0%
	AAGAACAATCCAACCCAATA+AGG	+	chr4.1:33965639-33965658	None:intergenic	35.0%
	ACAATGTCAACATTTCCATC+TGG	+	chr4.1:33965800-33965819	None:intergenic	35.0%
	TCAAACGGAGCAAAACTAAT+AGG	+	chr4.1:33965491-33965510	None:intergenic	35.0%
	TCATGGGATGACTAATTACT+GGG	-	chr4.1:33965607-33965626	MS.gene056390:CDS	35.0%
	TGTTGGATATGCTATAGCTT+GGG	-	chr4.1:33965577-33965596	MS.gene056390:CDS	35.0%
	TTCATGGGATGACTAATTAC+TGG	-	chr4.1:33965606-33965625	MS.gene056390:CDS	35.0%
	TTGTTGGATATGCTATAGCT+TGG	-	chr4.1:33965576-33965595	MS.gene056390:CDS	35.0%
	TTTGCAGTATACACTTGTGT+TGG	-	chr4.1:33965286-33965305	MS.gene056390:CDS	35.0%
!	CATTTATCTGGGATTGTTGT+TGG	-	chr4.1:33965560-33965579	MS.gene056390:CDS	35.0%
!!!	ATTCGTGTGTTGTTTTTGGT+TGG	-	chr4.1:33965402-33965421	MS.gene056390:CDS	35.0%
!!!	GGTTATTCGTGTGTTGTTTT+TGG	-	chr4.1:33965398-33965417	MS.gene056390:CDS	35.0%
	AAATCCAAAGAGCTCCAACT+TGG	+	chr4.1:33965459-33965478	None:intergenic	40.0%
	ATAGCTTGGGGTTTGATTCA+TGG	-	chr4.1:33965590-33965609	MS.gene056390:CDS	40.0%
	CACTTCGATTATTGTTCCTC+AGG	-	chr4.1:33965523-33965542	MS.gene056390:CDS	40.0%
	GCAAATAATACTCGACACCA+AGG	+	chr4.1:33965271-33965290	None:intergenic	40.0%
	GTAGAGCAATTGGATCATGT+TGG	-	chr4.1:33965245-33965264	MS.gene056390:CDS	40.0%
	GTTGGATATGCTATAGCTTG+GGG	-	chr4.1:33965578-33965597	MS.gene056390:CDS	40.0%
	TACTGGGCACTTACCTTATT+GGG	-	chr4.1:33965623-33965642	MS.gene056390:CDS	40.0%
	TAGCTTGGGGTTTGATTCAT+GGG	-	chr4.1:33965591-33965610	MS.gene056390:CDS	40.0%
	TGTCCAATAAAACTTGCCTG+AGG	+	chr4.1:33965542-33965561	None:intergenic	40.0%
	TTACTGGGCACTTACCTTAT+TGG	-	chr4.1:33965622-33965641	MS.gene056390:CDS	40.0%
!	ATTACCGTCTGTGCGATTTT+TGG	-	chr4.1:33965736-33965755	MS.gene056390:CDS	40.0%
!	TGAGTATTTTCGTCGAGTGA+CGG	-	chr4.1:33965370-33965389	MS.gene056390:CDS	40.0%
!	TTACCGTCTGTGCGATTTTT+GGG	-	chr4.1:33965737-33965756	MS.gene056390:CDS	40.0%
!!	GTTCCTCAGGCAAGTTTTAT+TGG	-	chr4.1:33965536-33965555	MS.gene056390:CDS	40.0%
!!!	CGATTTTTGGGATCTAGCAA+TGG	-	chr4.1:33965749-33965768	MS.gene056390:CDS	40.0%
	AAGAGCTCCAACTTGGAAGA+AGG	+	chr4.1:33965452-33965471	None:intergenic	45.0%
	AATCGCACAGACGGTAATGA+AGG	+	chr4.1:33965734-33965753	None:intergenic	45.0%
	CACAGACGGTAATGAAGGAT+CGG	+	chr4.1:33965729-33965748	None:intergenic	45.0%
	GAAGCAACCTTCTTCCAAGT+TGG	-	chr4.1:33965442-33965461	MS.gene056390:CDS	45.0%
	GATCCCAAAAATCGCACAGA+CGG	+	chr4.1:33965743-33965762	None:intergenic	45.0%
	GCAGTATACACTTGTGTTGG+TGG	-	chr4.1:33965289-33965308	MS.gene056390:CDS	45.0%
	TCTTGGGGTTGTAGAGCAAT+TGG	-	chr4.1:33965235-33965254	MS.gene056390:CDS	45.0%
!	CAATTGGATCATGTTGGCCT+TGG	-	chr4.1:33965251-33965270	MS.gene056390:CDS	45.0%
!	TCTTCCAAGTTGGAGCTCTT+TGG	-	chr4.1:33965452-33965471	MS.gene056390:CDS	45.0%
!!	ATGAGTGCACTTTGGAGTCT+TGG	-	chr4.1:33965218-33965237	MS.gene056390:CDS	45.0%
!!	CTTGTGTTGGTGGTTGTATC+CGG	-	chr4.1:33965299-33965318	MS.gene056390:CDS	45.0%
!!	TGAGTGCACTTTGGAGTCTT+GGG	-	chr4.1:33965219-33965238	MS.gene056390:CDS	45.0%
!!	TTGTGTTGGTGGTTGTATCC+GGG	-	chr4.1:33965300-33965319	MS.gene056390:CDS	45.0%
	CAGATGAGTGCATTGCCAGA+TGG	-	chr4.1:33965782-33965801	MS.gene056390:CDS	50.0%
	CATTGCCAGAACCAAAACCC+CGG	+	chr4.1:33965321-33965340	None:intergenic	50.0%
	GGGCACTTACCTTATTGGGT+TGG	-	chr4.1:33965627-33965646	MS.gene056390:CDS	50.0%
	TGGCAATGCACTCATCTGCA+GGG	+	chr4.1:33965780-33965799	None:intergenic	50.0%
!!	GAGTGCACTTTGGAGTCTTG+GGG	-	chr4.1:33965220-33965239	MS.gene056390:CDS	50.0%
!!	TGTGTTGGTGGTTGTATCCG+GGG	-	chr4.1:33965301-33965320	MS.gene056390:CDS	50.0%
!!!	TGTATCCGGGGTTTTGGTTC+TGG	-	chr4.1:33965313-33965332	MS.gene056390:CDS	50.0%
	CTGGCAATGCACTCATCTGC+AGG	+	chr4.1:33965781-33965800	None:intergenic	55.0%
	TTTCGTCGAGTGACGGCTGT+TGG	-	chr4.1:33965377-33965396	MS.gene056390:CDS	55.0%
!	GGTGGTTGTATCCGGGGTTT+TGG	-	chr4.1:33965307-33965326	MS.gene056390:CDS	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.1	gene	33965218	33965823	33965218	ID=MS.gene056390
chr4.1	mRNA	33965218	33965823	33965218	ID=MS.gene056390.t1;Parent=MS.gene056390
chr4.1	exon	33965218	33965823	33965218	ID=MS.gene056390.t1.exon1;Parent=MS.gene056390.t1
chr4.1	CDS	33965218	33965823	33965218	ID=cds.MS.gene056390.t1;Parent=MS.gene056390.t1

Gene Sequence

>MS.gene056390

ATGAGTGCACTTTGGAGTCTTGGGGTTGTAGAGCAATTGGATCATGTTGGCCTTGGTGTCGAGTATTATTTGCAGTATACACTTGTGTTGGTGGTTGTATCCGGGGTTTTGGTTCTGGCAATGTATCACTTGTTGATTCAAAGATTCAAGGTTGAGTATTTTCGTCGAGTGACGGCTGTTGGTTATTCGTGTGTTGTTTTTGGTTGGATGACGATTCTTTCTGTGAAGCAACCTTCTTCCAAGTTGGAGCTCTTTGGATTTCTTTCGCTTCCTATTAGTTTTGCTCCGTTTGAATCGCTTATTTTCACTTCGATTATTGTTCCTCAGGCAAGTTTTATTGGACATTTATCTGGGATTGTTGTTGGATATGCTATAGCTTGGGGTTTGATTCATGGGATGACTAATTACTGGGCACTTACCTTATTGGGTTGGATTGTTCTTGTCTTTGTTTTGAGTTTGAAGAAATCTGGTGCACTTGACATAAGCTTCATTGAGATTGAATCTGTTACCGATCCTTCATTACCGTCTGTGCGATTTTTGGGATCTAGCAATGGCAGAACCCTGCAGATGAGTGCATTGCCAGATGGAAATGTTGACATTGTCTAA

Protein sequence

>MS.gene056390.t1

MSALWSLGVVEQLDHVGLGVEYYLQYTLVLVVVSGVLVLAMYHLLIQRFKVEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLELFGFLSLPISFAPFESLIFTSIIVPQASFIGHLSGIVVGYAIAWGLIHGMTNYWALTLLGWIVLVFVLSLKKSGALDISFIEIESVTDPSLPSVRFLGSSNGRTLQMSALPDGNVDIV