Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058149.t1 | XP_003610915.2 | 98.8 | 333 | 4 | 0 | 1 | 333 | 1 | 333 | 1.60E-184 | 655.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058149.t1 | Q8BVQ5 | 44.6 | 370 | 154 | 7 | 3 | 326 | 7 | 371 | 3.6e-76 | 286.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058149.t1 | G7K7W8 | 98.8 | 333 | 4 | 0 | 1 | 333 | 1 | 333 | 1.2e-184 | 655.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049368 | MS.gene058149 | 0.809675 | 1.68E-50 | -1.69E-46 |
| MS.gene049411 | MS.gene058149 | 0.827948 | 1.18E-54 | -1.69E-46 |
| MS.gene049807 | MS.gene058149 | 0.816422 | 5.57E-52 | -1.69E-46 |
| MS.gene050689 | MS.gene058149 | 0.835839 | 1.33E-56 | -1.69E-46 |
| MS.gene050838 | MS.gene058149 | 0.811936 | 5.46E-51 | -1.69E-46 |
| MS.gene050945 | MS.gene058149 | 0.802184 | 6.33E-49 | -1.69E-46 |
| MS.gene051003 | MS.gene058149 | 0.824121 | 9.58E-54 | -1.69E-46 |
| MS.gene051234 | MS.gene058149 | 0.868165 | 8.00E-66 | -1.69E-46 |
| MS.gene051642 | MS.gene058149 | 0.810028 | 1.41E-50 | -1.69E-46 |
| MS.gene052072 | MS.gene058149 | 0.814775 | 1.30E-51 | -1.69E-46 |
| MS.gene052307 | MS.gene058149 | 0.80501 | 1.64E-49 | -1.69E-46 |
| MS.gene052609 | MS.gene058149 | 0.803101 | 4.09E-49 | -1.69E-46 |
| MS.gene053143 | MS.gene058149 | 0.815612 | 8.46E-52 | -1.69E-46 |
| MS.gene05364 | MS.gene058149 | 0.827921 | 1.20E-54 | -1.69E-46 |
| MS.gene055220 | MS.gene058149 | 0.821574 | 3.76E-53 | -1.69E-46 |
| MS.gene055221 | MS.gene058149 | 0.843178 | 1.64E-58 | -1.69E-46 |
| MS.gene057102 | MS.gene058149 | 0.838064 | 3.59E-57 | -1.69E-46 |
| MS.gene058149 | MS.gene058210 | 0.803456 | 3.46E-49 | -1.69E-46 |
| MS.gene058149 | MS.gene059146 | 0.807992 | 3.85E-50 | -1.69E-46 |
| MS.gene058149 | MS.gene059778 | 0.830392 | 3.01E-55 | -1.69E-46 |
| MS.gene058149 | MS.gene05978 | 0.803931 | 2.75E-49 | -1.69E-46 |
| MS.gene058149 | MS.gene060342 | -0.800358 | 1.50E-48 | -1.69E-46 |
| MS.gene058149 | MS.gene060343 | -0.824785 | 6.69E-54 | -1.69E-46 |
| MS.gene058149 | MS.gene061100 | 0.832302 | 1.02E-55 | -1.69E-46 |
| MS.gene058149 | MS.gene061707 | 0.835578 | 1.55E-56 | -1.69E-46 |
| MS.gene058149 | MS.gene061878 | 0.85001 | 2.24E-60 | -1.69E-46 |
| MS.gene058149 | MS.gene06238 | 0.836196 | 1.08E-56 | -1.69E-46 |
| MS.gene058149 | MS.gene062770 | 0.817083 | 3.96E-52 | -1.69E-46 |
| MS.gene058149 | MS.gene064425 | 0.80805 | 3.75E-50 | -1.69E-46 |
| MS.gene058149 | MS.gene065055 | 0.839605 | 1.43E-57 | -1.69E-46 |
| MS.gene058149 | MS.gene066055 | 0.816596 | 5.10E-52 | -1.69E-46 |
| MS.gene058149 | MS.gene066196 | 0.826572 | 2.52E-54 | -1.69E-46 |
| MS.gene058149 | MS.gene066566 | 0.825927 | 3.59E-54 | -1.69E-46 |
| MS.gene058149 | MS.gene067556 | 0.833682 | 4.64E-56 | -1.69E-46 |
| MS.gene058149 | MS.gene069828 | 0.838143 | 3.43E-57 | -1.69E-46 |
| MS.gene058149 | MS.gene06984 | 0.813677 | 2.27E-51 | -1.69E-46 |
| MS.gene058149 | MS.gene06998 | 0.806016 | 1.01E-49 | -1.69E-46 |
| MS.gene058149 | MS.gene072545 | 0.801798 | 7.60E-49 | -1.69E-46 |
| MS.gene058149 | MS.gene072641 | 0.818404 | 2.00E-52 | -1.69E-46 |
| MS.gene058149 | MS.gene072740 | 0.827832 | 1.26E-54 | -1.69E-46 |
| MS.gene058149 | MS.gene072762 | 0.802892 | 4.52E-49 | -1.69E-46 |
| MS.gene058149 | MS.gene073207 | 0.829671 | 4.52E-55 | -1.69E-46 |
| MS.gene058149 | MS.gene074317 | 0.803667 | 3.12E-49 | -1.69E-46 |
| MS.gene058149 | MS.gene07878 | 0.834797 | 2.44E-56 | -1.69E-46 |
| MS.gene058149 | MS.gene08336 | 0.831988 | 1.22E-55 | -1.69E-46 |
| MS.gene058149 | MS.gene08532 | 0.851598 | 8.00E-61 | -1.69E-46 |
| MS.gene058149 | MS.gene08793 | 0.816067 | 6.70E-52 | -1.69E-46 |
| MS.gene058149 | MS.gene08922 | 0.814944 | 1.19E-51 | -1.69E-46 |
| MS.gene058149 | MS.gene09021 | 0.857185 | 1.94E-62 | -1.69E-46 |
| MS.gene058149 | MS.gene09224 | 0.853337 | 2.55E-61 | -1.69E-46 |
| MS.gene058149 | MS.gene20934 | 0.825018 | 5.89E-54 | -1.69E-46 |
| MS.gene058149 | MS.gene21114 | 0.819761 | 9.80E-53 | -1.69E-46 |
| MS.gene058149 | MS.gene21651 | 0.819025 | 1.44E-52 | -1.69E-46 |
| MS.gene058149 | MS.gene21917 | 0.862248 | 5.80E-64 | -1.69E-46 |
| MS.gene058149 | MS.gene22321 | 0.835305 | 1.81E-56 | -1.69E-46 |
| MS.gene058149 | MS.gene22695 | 0.804002 | 2.66E-49 | -1.69E-46 |
| MS.gene058149 | MS.gene22740 | 0.814252 | 1.69E-51 | -1.69E-46 |
| MS.gene058149 | MS.gene23698 | 0.801359 | 9.34E-49 | -1.69E-46 |
| MS.gene058149 | MS.gene24076 | 0.816111 | 6.54E-52 | -1.69E-46 |
| MS.gene058149 | MS.gene24302 | 0.825776 | 3.90E-54 | -1.69E-46 |
| MS.gene058149 | MS.gene24330 | 0.808561 | 2.92E-50 | -1.69E-46 |
| MS.gene058149 | MS.gene24531 | 0.821799 | 3.33E-53 | -1.69E-46 |
| MS.gene058149 | MS.gene25061 | 0.822366 | 2.46E-53 | -1.69E-46 |
| MS.gene058149 | MS.gene25901 | 0.812393 | 4.34E-51 | -1.69E-46 |
| MS.gene058149 | MS.gene25981 | -0.843509 | 1.34E-58 | -1.69E-46 |
| MS.gene058149 | MS.gene25991 | 0.804903 | 1.73E-49 | -1.69E-46 |
| MS.gene058149 | MS.gene26625 | 0.826704 | 2.34E-54 | -1.69E-46 |
| MS.gene058149 | MS.gene26945 | 0.807177 | 5.74E-50 | -1.69E-46 |
| MS.gene058149 | MS.gene27646 | -0.834513 | 2.87E-56 | -1.69E-46 |
| MS.gene058149 | MS.gene28632 | 0.816068 | 6.69E-52 | -1.69E-46 |
| MS.gene058149 | MS.gene28918 | 0.825719 | 4.02E-54 | -1.69E-46 |
| MS.gene058149 | MS.gene29631 | 0.805706 | 1.17E-49 | -1.69E-46 |
| MS.gene058149 | MS.gene30352 | 0.808903 | 2.46E-50 | -1.69E-46 |
| MS.gene058149 | MS.gene31045 | 0.819834 | 9.43E-53 | -1.69E-46 |
| MS.gene058149 | MS.gene31571 | 0.803462 | 3.45E-49 | -1.69E-46 |
| MS.gene058149 | MS.gene32688 | 0.855139 | 7.71E-62 | -1.69E-46 |
| MS.gene058149 | MS.gene33135 | 0.805771 | 1.14E-49 | -1.69E-46 |
| MS.gene058149 | MS.gene34164 | 0.824312 | 8.64E-54 | -1.69E-46 |
| MS.gene058149 | MS.gene34232 | 0.82755 | 1.47E-54 | -1.69E-46 |
| MS.gene058149 | MS.gene34266 | 0.804008 | 2.65E-49 | -1.69E-46 |
| MS.gene058149 | MS.gene34508 | 0.830713 | 2.52E-55 | -1.69E-46 |
| MS.gene058149 | MS.gene34925 | 0.806599 | 7.61E-50 | -1.69E-46 |
| MS.gene058149 | MS.gene34950 | 0.835363 | 1.75E-56 | -1.69E-46 |
| MS.gene058149 | MS.gene36285 | 0.800055 | 1.72E-48 | -1.69E-46 |
| MS.gene058149 | MS.gene36291 | 0.810965 | 8.87E-51 | -1.69E-46 |
| MS.gene058149 | MS.gene36334 | 0.801274 | 9.73E-49 | -1.69E-46 |
| MS.gene058149 | MS.gene36542 | 0.804497 | 2.10E-49 | -1.69E-46 |
| MS.gene058149 | MS.gene37090 | 0.80455 | 2.05E-49 | -1.69E-46 |
| MS.gene058149 | MS.gene37106 | 0.802684 | 4.99E-49 | -1.69E-46 |
| MS.gene058149 | MS.gene39046 | 0.801746 | 7.79E-49 | -1.69E-46 |
| MS.gene058149 | MS.gene39052 | 0.805945 | 1.04E-49 | -1.69E-46 |
| MS.gene058149 | MS.gene41678 | 0.801346 | 9.40E-49 | -1.69E-46 |
| MS.gene058149 | MS.gene42653 | 0.851879 | 6.65E-61 | -1.69E-46 |
| MS.gene058149 | MS.gene45537 | 0.809463 | 1.87E-50 | -1.69E-46 |
| MS.gene058149 | MS.gene46127 | 0.810596 | 1.07E-50 | -1.69E-46 |
| MS.gene058149 | MS.gene46305 | 0.808579 | 2.89E-50 | -1.69E-46 |
| MS.gene058149 | MS.gene47601 | 0.806674 | 7.33E-50 | -1.69E-46 |
| MS.gene058149 | MS.gene48037 | 0.84549 | 3.93E-59 | -1.69E-46 |
| MS.gene058149 | MS.gene48348 | 0.827088 | 1.90E-54 | -1.69E-46 |
| MS.gene058149 | MS.gene49383 | 0.814989 | 1.16E-51 | -1.69E-46 |
| MS.gene058149 | MS.gene49818 | 0.837004 | 6.71E-57 | -1.69E-46 |
| MS.gene058149 | MS.gene50004 | 0.826946 | 2.05E-54 | -1.69E-46 |
| MS.gene058149 | MS.gene50013 | 0.815752 | 7.87E-52 | -1.69E-46 |
| MS.gene058149 | MS.gene50394 | 0.818497 | 1.90E-52 | -1.69E-46 |
| MS.gene058149 | MS.gene51445 | 0.80504 | 1.62E-49 | -1.69E-46 |
| MS.gene058149 | MS.gene51789 | 0.801723 | 7.87E-49 | -1.69E-46 |
| MS.gene058149 | MS.gene52122 | 0.802665 | 5.04E-49 | -1.69E-46 |
| MS.gene058149 | MS.gene52170 | 0.834042 | 3.77E-56 | -1.69E-46 |
| MS.gene058149 | MS.gene52404 | 0.81923 | 1.30E-52 | -1.69E-46 |
| MS.gene058149 | MS.gene52837 | 0.828127 | 1.07E-54 | -1.69E-46 |
| MS.gene058149 | MS.gene54220 | 0.835218 | 1.91E-56 | -1.69E-46 |
| MS.gene058149 | MS.gene55101 | 0.801306 | 9.58E-49 | -1.69E-46 |
| MS.gene058149 | MS.gene55530 | 0.806862 | 6.69E-50 | -1.69E-46 |
| MS.gene058149 | MS.gene55653 | 0.840004 | 1.13E-57 | -1.69E-46 |
| MS.gene058149 | MS.gene55904 | 0.8102 | 1.30E-50 | -1.69E-46 |
| MS.gene058149 | MS.gene56163 | 0.831212 | 1.90E-55 | -1.69E-46 |
| MS.gene058149 | MS.gene56169 | 0.80087 | 1.18E-48 | -1.69E-46 |
| MS.gene058149 | MS.gene56462 | 0.822516 | 2.27E-53 | -1.69E-46 |
| MS.gene058149 | MS.gene56742 | 0.839738 | 1.32E-57 | -1.69E-46 |
| MS.gene058149 | MS.gene57783 | 0.804478 | 2.12E-49 | -1.69E-46 |
| MS.gene058149 | MS.gene57980 | 0.801824 | 7.50E-49 | -1.69E-46 |
| MS.gene058149 | MS.gene58058 | -0.838566 | 2.66E-57 | -1.69E-46 |
| MS.gene058149 | MS.gene58098 | 0.810025 | 1.41E-50 | -1.69E-46 |
| MS.gene058149 | MS.gene58227 | 0.803259 | 3.80E-49 | -1.69E-46 |
| MS.gene058149 | MS.gene58719 | 0.806194 | 9.26E-50 | -1.69E-46 |
| MS.gene058149 | MS.gene58925 | 0.813209 | 2.87E-51 | -1.69E-46 |
| MS.gene058149 | MS.gene59134 | 0.813677 | 2.27E-51 | -1.69E-46 |
| MS.gene058149 | MS.gene59241 | 0.839938 | 1.17E-57 | -1.69E-46 |
| MS.gene058149 | MS.gene59242 | 0.83445 | 2.98E-56 | -1.69E-46 |
| MS.gene058149 | MS.gene61117 | 0.829642 | 4.59E-55 | -1.69E-46 |
| MS.gene058149 | MS.gene61204 | 0.807917 | 4.00E-50 | -1.69E-46 |
| MS.gene058149 | MS.gene61282 | 0.825519 | 4.49E-54 | -1.69E-46 |
| MS.gene058149 | MS.gene62423 | 0.820274 | 7.48E-53 | -1.69E-46 |
| MS.gene058149 | MS.gene62924 | 0.823598 | 1.27E-53 | -1.69E-46 |
| MS.gene058149 | MS.gene63726 | 0.819414 | 1.18E-52 | -1.69E-46 |
| MS.gene058149 | MS.gene63930 | 0.808738 | 2.67E-50 | -1.69E-46 |
| MS.gene058149 | MS.gene64806 | 0.80018 | 1.63E-48 | -1.69E-46 |
| MS.gene058149 | MS.gene66845 | 0.804074 | 2.57E-49 | -1.69E-46 |
| MS.gene058149 | MS.gene66973 | 0.809565 | 1.78E-50 | -1.69E-46 |
| MS.gene058149 | MS.gene67881 | 0.831459 | 1.65E-55 | -1.69E-46 |
| MS.gene058149 | MS.gene68106 | 0.812093 | 5.04E-51 | -1.69E-46 |
| MS.gene058149 | MS.gene68420 | 0.824917 | 6.22E-54 | -1.69E-46 |
| MS.gene058149 | MS.gene69820 | 0.84974 | 2.66E-60 | -1.69E-46 |
| MS.gene058149 | MS.gene70577 | 0.801352 | 9.38E-49 | -1.69E-46 |
| MS.gene058149 | MS.gene71236 | 0.814342 | 1.62E-51 | -1.69E-46 |
| MS.gene058149 | MS.gene71616 | 0.813441 | 2.56E-51 | -1.69E-46 |
| MS.gene058149 | MS.gene71884 | 0.802898 | 4.51E-49 | -1.69E-46 |
| MS.gene058149 | MS.gene71994 | 0.840904 | 6.57E-58 | -1.69E-46 |
| MS.gene058149 | MS.gene72353 | 0.822031 | 2.94E-53 | -1.69E-46 |
| MS.gene058149 | MS.gene72413 | 0.809908 | 1.50E-50 | -1.69E-46 |
| MS.gene058149 | MS.gene72950 | -0.803058 | 4.18E-49 | -1.69E-46 |
| MS.gene058149 | MS.gene73883 | 0.807728 | 4.39E-50 | -1.69E-46 |
| MS.gene058149 | MS.gene73885 | 0.820372 | 7.10E-53 | -1.69E-46 |
| MS.gene058149 | MS.gene74235 | 0.800836 | 1.20E-48 | -1.69E-46 |
| MS.gene058149 | MS.gene74537 | 0.802619 | 5.15E-49 | -1.69E-46 |
| MS.gene058149 | MS.gene74606 | 0.852125 | 5.67E-61 | -1.69E-46 |
| MS.gene058149 | MS.gene74972 | 0.840302 | 9.43E-58 | -1.69E-46 |
| MS.gene058149 | MS.gene75344 | 0.800532 | 1.38E-48 | -1.69E-46 |
| MS.gene058149 | MS.gene76227 | 0.824621 | 7.31E-54 | -1.69E-46 |
| MS.gene058149 | MS.gene76314 | 0.846408 | 2.21E-59 | -1.69E-46 |
| MS.gene058149 | MS.gene78232 | 0.807619 | 4.63E-50 | -1.69E-46 |
| MS.gene058149 | MS.gene80201 | 0.850743 | 1.39E-60 | -1.69E-46 |
| MS.gene058149 | MS.gene81525 | -0.824812 | 6.59E-54 | -1.69E-46 |
| MS.gene058149 | MS.gene81751 | 0.8122 | 4.78E-51 | -1.69E-46 |
| MS.gene058149 | MS.gene82139 | 0.816303 | 5.93E-52 | -1.69E-46 |
| MS.gene058149 | MS.gene82421 | 0.804493 | 2.10E-49 | -1.69E-46 |
| MS.gene058149 | MS.gene82912 | 0.813268 | 2.79E-51 | -1.69E-46 |
| MS.gene058149 | MS.gene82993 | 0.803653 | 3.15E-49 | -1.69E-46 |
| MS.gene058149 | MS.gene83122 | 0.820564 | 6.42E-53 | -1.69E-46 |
| MS.gene058149 | MS.gene84677 | 0.802832 | 4.65E-49 | -1.69E-46 |
| MS.gene058149 | MS.gene85610 | 0.8562 | 3.78E-62 | -1.69E-46 |
| MS.gene058149 | MS.gene86038 | 0.815792 | 7.71E-52 | -1.69E-46 |
| MS.gene058149 | MS.gene86919 | 0.814134 | 1.80E-51 | -1.69E-46 |
| MS.gene058149 | MS.gene87292 | 0.83453 | 2.84E-56 | -1.69E-46 |
| MS.gene058149 | MS.gene87922 | 0.800999 | 1.11E-48 | -1.69E-46 |
| MS.gene058149 | MS.gene88032 | 0.827378 | 1.62E-54 | -1.69E-46 |
| MS.gene058149 | MS.gene88718 | 0.813256 | 2.81E-51 | -1.69E-46 |
| MS.gene058149 | MS.gene88927 | 0.827141 | 1.84E-54 | -1.69E-46 |
| MS.gene058149 | MS.gene89100 | 0.801968 | 7.01E-49 | -1.69E-46 |
| MS.gene058149 | MS.gene90381 | 0.813824 | 2.11E-51 | -1.69E-46 |
| MS.gene058149 | MS.gene90536 | -0.82328 | 1.51E-53 | -1.69E-46 |
| MS.gene058149 | MS.gene90880 | 0.850763 | 1.38E-60 | -1.69E-46 |
| MS.gene058149 | MS.gene91203 | 0.843707 | 1.19E-58 | -1.69E-46 |
| MS.gene058149 | MS.gene91307 | 0.829136 | 6.09E-55 | -1.69E-46 |
| MS.gene058149 | MS.gene91820 | 0.836145 | 1.11E-56 | -1.69E-46 |
| MS.gene058149 | MS.gene93633 | 0.820387 | 7.05E-53 | -1.69E-46 |
| MS.gene058149 | MS.gene93728 | 0.825531 | 4.45E-54 | -1.69E-46 |
| MS.gene058149 | MS.gene95049 | 0.831997 | 1.22E-55 | -1.69E-46 |
| MS.gene058149 | MS.gene95728 | 0.840651 | 7.65E-58 | -1.69E-46 |
| MS.gene058149 | MS.gene96190 | 0.853685 | 2.03E-61 | -1.69E-46 |
| MS.gene058149 | MS.gene96191 | 0.804713 | 1.89E-49 | -1.69E-46 |
| MS.gene058149 | MS.gene96211 | 0.833744 | 4.47E-56 | -1.69E-46 |
| MS.gene058149 | MS.gene96690 | 0.800477 | 1.42E-48 | -1.69E-46 |
| MS.gene058149 | MS.gene98040 | 0.807346 | 5.29E-50 | -1.69E-46 |
| MS.gene058149 | MS.gene99915 | 0.82687 | 2.14E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058149.t1 | MTR_5g008450 | 98.799 | 333 | 4 | 0 | 1 | 333 | 1 | 333 | 0.0 | 683 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058149.t1 | AT4G10050 | 76.577 | 333 | 75 | 2 | 3 | 332 | 4 | 336 | 0.0 | 546 |
| MS.gene058149.t1 | AT4G10050 | 82.955 | 264 | 45 | 0 | 69 | 332 | 1 | 264 | 4.58e-169 | 471 |
Find 81 sgRNAs with CRISPR-Local
Find 348 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGACTCCATTAGGGCCTATT+TGG | 0.179803 | 5.4:-3374444 | None:intergenic |
| TTACACGGTGGTGGTTATTC+TGG | 0.180394 | 5.4:+3369531 | MS.gene058149:CDS |
| AAACTAACATCATTTGTTTC+TGG | 0.230576 | 5.4:-3369372 | None:intergenic |
| TGATCGTCGGTGATGTCTTC+GGG | 0.285744 | 5.4:-3369138 | None:intergenic |
| TTTATTGCTCGTAACCAAAT+AGG | 0.289071 | 5.4:+3374430 | MS.gene058149:CDS |
| GAAGAAGGTGGTTACTTAGT+TGG | 0.300333 | 5.4:-3369207 | None:intergenic |
| ACACACAGGGCATGCTATTC+AGG | 0.324713 | 5.4:+3374272 | MS.gene058149:CDS |
| ATACATACCACGACTCCATT+AGG | 0.334656 | 5.4:-3374454 | None:intergenic |
| TGATGTATTGGCTGTTATAA+AGG | 0.347563 | 5.4:+3370504 | MS.gene058149:CDS |
| AAATCATTGTCAACCTTGGC+TGG | 0.369006 | 5.4:+3371606 | MS.gene058149:CDS |
| CTTTCATTTGCTGTGTCAAC+GGG | 0.387831 | 5.4:+3370287 | MS.gene058149:CDS |
| TACACGGTGGTGGTTATTCT+GGG | 0.388188 | 5.4:+3369532 | MS.gene058149:CDS |
| TGCAGCAAATCCTCTCAAAT+AGG | 0.401973 | 5.4:+3371783 | MS.gene058149:CDS |
| TTGATCGTCGGTGATGTCTT+CGG | 0.402926 | 5.4:-3369139 | None:intergenic |
| TGGAAAAGACTGAACAATAT+TGG | 0.403174 | 5.4:+3372340 | MS.gene058149:CDS |
| AATATGATGATTCGAAGAAA+TGG | 0.403489 | 5.4:+3372156 | MS.gene058149:CDS |
| AATAACAACAGCTTCGGAAC+AGG | 0.404928 | 5.4:-3373751 | None:intergenic |
| GCTGTTATAAAGGAATTATA+TGG | 0.414492 | 5.4:+3370514 | MS.gene058149:CDS |
| CCGAAGCTGTTGTTATTAGC+AGG | 0.418860 | 5.4:+3373757 | MS.gene058149:CDS |
| GTTATATTGTAGGAGTTCTT+CGG | 0.419029 | 5.4:+3369290 | MS.gene058149:intron |
| CGTAACCAAATAGGCCCTAA+TGG | 0.420014 | 5.4:+3374439 | MS.gene058149:CDS |
| AGAAATACGCACCGTTGGAT+TGG | 0.446308 | 5.4:+3369313 | MS.gene058149:CDS |
| TGTAACAGGTCTCTCACAAT+TGG | 0.451447 | 5.4:+3374213 | MS.gene058149:intron |
| TACATACCACGACTCCATTA+GGG | 0.451852 | 5.4:-3374453 | None:intergenic |
| ATTAGCAGGAACAGATAGAT+TGG | 0.456800 | 5.4:+3373771 | MS.gene058149:CDS |
| CTGAACAATATTGGAAAGGC+TGG | 0.457718 | 5.4:+3372349 | MS.gene058149:CDS |
| CTTGGCTGGGTTGATTGTTG+TGG | 0.462285 | 5.4:+3371620 | MS.gene058149:CDS |
| TGACCAACGAGGATAATTGC+TGG | 0.466211 | 5.4:-3370547 | None:intergenic |
| TTGAGGAGCAGAAGCGAAAA+CGG | 0.466304 | 5.4:-3369178 | None:intergenic |
| GTATAATTAAGGAGAAAGCT+AGG | 0.484847 | 5.4:+3370309 | MS.gene058149:CDS |
| TTGCTTGTATGCAGATTGAA+TGG | 0.491842 | 5.4:+3372069 | MS.gene058149:intron |
| GATTGTTGTGGATGTTGTAG+AGG | 0.492777 | 5.4:+3371632 | MS.gene058149:CDS |
| ACAAGAGTTGCAAATTCATC+AGG | 0.495103 | 5.4:-3374400 | None:intergenic |
| CCGTGTAAACAAAATACAAC+AGG | 0.497807 | 5.4:-3369516 | None:intergenic |
| GCTTTCATTTGCTGTGTCAA+CGG | 0.504011 | 5.4:+3370286 | MS.gene058149:CDS |
| GCGAAAACGGAAGCGGGTTG+TGG | 0.507851 | 5.4:-3369165 | None:intergenic |
| GACCATGTGCAATGATGTAT+TGG | 0.512442 | 5.4:+3370492 | MS.gene058149:intron |
| TGTGTCAACGGGTATAATTA+AGG | 0.520801 | 5.4:+3370298 | MS.gene058149:CDS |
| TTCGGAGAAATACGCACCGT+TGG | 0.529265 | 5.4:+3369308 | MS.gene058149:CDS |
| TTATGTTTATCGAACAGAGC+TGG | 0.535307 | 5.4:+3372320 | MS.gene058149:CDS |
| GCAGAAGCGAAAACGGAAGC+GGG | 0.536038 | 5.4:-3369171 | None:intergenic |
| CAATTATCCTCGTTGGTCAC+AGG | 0.536543 | 5.4:+3370551 | MS.gene058149:CDS |
| CCTCCAGCAATTATCCTCGT+TGG | 0.537076 | 5.4:+3370544 | MS.gene058149:CDS |
| AATGTTGCATCCTATTTGAG+AGG | 0.540775 | 5.4:-3371793 | None:intergenic |
| TACTTAGTTGGAGGACGTTG+AGG | 0.548397 | 5.4:-3369195 | None:intergenic |
| CCTGCTAATAACAACAGCTT+CGG | 0.548805 | 5.4:-3373757 | None:intergenic |
| GAAAGCTAGGGTGGTTGCGA+TGG | 0.548883 | 5.4:+3370322 | MS.gene058149:CDS |
| AGCAGAAGCGAAAACGGAAG+CGG | 0.551536 | 5.4:-3369172 | None:intergenic |
| ATGATAGTTGTCAGACACAC+AGG | 0.553607 | 5.4:+3374258 | MS.gene058149:CDS |
| CTCACAATTGGTCAAATGCA+AGG | 0.555981 | 5.4:+3374225 | MS.gene058149:CDS |
| GAAGGTGGTTACTTAGTTGG+AGG | 0.568541 | 5.4:-3369204 | None:intergenic |
| GCGATGGACTTGAGAGGTCA+TGG | 0.569848 | 5.4:+3370338 | MS.gene058149:CDS |
| AAGGAAATCATTGTCAACCT+TGG | 0.570433 | 5.4:+3371602 | MS.gene058149:CDS |
| AATCATTGTCAACCTTGGCT+GGG | 0.570477 | 5.4:+3371607 | MS.gene058149:CDS |
| AGAATTTCAGGGAACAGCAA+TGG | 0.571928 | 5.4:+3371745 | MS.gene058149:intron |
| ATTGAATGGAGTGTGAGGGC+TGG | 0.573026 | 5.4:+3372083 | MS.gene058149:CDS |
| CTTTACATGGCAGGAACTGA+GGG | 0.579083 | 5.4:+3369492 | MS.gene058149:CDS |
| TCTTTACATGGCAGGAACTG+AGG | 0.579632 | 5.4:+3369491 | MS.gene058149:CDS |
| TATAATTAAGGAGAAAGCTA+GGG | 0.580788 | 5.4:+3370310 | MS.gene058149:CDS |
| AAAACGGAAGCGGGTTGTGG+TGG | 0.588511 | 5.4:-3369162 | None:intergenic |
| AAGACTGAACAATATTGGAA+AGG | 0.599196 | 5.4:+3372345 | MS.gene058149:CDS |
| AATTAAGGAGAAAGCTAGGG+TGG | 0.599249 | 5.4:+3370313 | MS.gene058149:CDS |
| CAGGAACAGATAGATTGGAC+AGG | 0.610230 | 5.4:+3373776 | MS.gene058149:CDS |
| CACAACAATCAACCCAGCCA+AGG | 0.611749 | 5.4:-3371619 | None:intergenic |
| ATAACAACAGCTTCGGAACA+GGG | 0.614518 | 5.4:-3373750 | None:intergenic |
| ATCCATCATCAAAGCATGGG+GGG | 0.618423 | 5.4:+3371555 | MS.gene058149:intron |
| TCCATCATCAAAGCATGGGG+GGG | 0.626873 | 5.4:+3371556 | MS.gene058149:intron |
| TAACAACAGCTTCGGAACAG+GGG | 0.644743 | 5.4:-3373749 | None:intergenic |
| GATCGTCGGTGATGTCTTCG+GGG | 0.656076 | 5.4:-3369137 | None:intergenic |
| GGGTTGTGGTGGTTGATCGT+CGG | 0.667260 | 5.4:-3369151 | None:intergenic |
| AATAGGCCCTAATGGAGTCG+TGG | 0.668041 | 5.4:+3374447 | MS.gene058149:CDS |
| TGCAGATTGAATGGAGTGTG+AGG | 0.671060 | 5.4:+3372078 | MS.gene058149:intron |
| TGATAGTTGTCAGACACACA+GGG | 0.673323 | 5.4:+3374259 | MS.gene058149:CDS |
| AGCCAATACATCATTGCACA+TGG | 0.678025 | 5.4:-3370494 | None:intergenic |
| GTGGTTGCGATGGACTTGAG+AGG | 0.687131 | 5.4:+3370332 | MS.gene058149:CDS |
| AAATACACAGACCAATCCAA+CGG | 0.692479 | 5.4:-3369324 | None:intergenic |
| TTGCTGTGCATATTGCTGCA+AGG | 0.693525 | 5.4:+3371583 | MS.gene058149:CDS |
| TATCCATCATCAAAGCATGG+GGG | 0.700379 | 5.4:+3371554 | MS.gene058149:intron |
| GCAGATTGAATGGAGTGTGA+GGG | 0.705258 | 5.4:+3372079 | MS.gene058149:intron |
| CCAACGAGGATAATTGCTGG+AGG | 0.728227 | 5.4:-3370544 | None:intergenic |
| TAAATCACCTGTGACCAACG+AGG | 0.765150 | 5.4:-3370558 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATTTAAGTATTTTATCAT+TGG | + | chr5.4:3373667-3373686 | MS.gene058149:intron | 10.0% |
| !!! | TATTTTTTTTTTTTTTTGAG+AGG | + | chr5.4:3372751-3372770 | MS.gene058149:intron | 10.0% |
| !!! | TCTATTATACTTTTTTTTTA+GGG | - | chr5.4:3372866-3372885 | None:intergenic | 10.0% |
| !!! | TTATTTTACTTATTATATTC+AGG | + | chr5.4:3369461-3369480 | MS.gene058149:intron | 10.0% |
| !!! | TTCTATTATACTTTTTTTTT+AGG | - | chr5.4:3372867-3372886 | None:intergenic | 10.0% |
| !! | AACATATATTATGTTTAATG+TGG | + | chr5.4:3371307-3371326 | MS.gene058149:intron | 15.0% |
| !! | AATCGTATGATATAATAATA+AGG | - | chr5.4:3372706-3372725 | None:intergenic | 15.0% |
| !! | ATAAATATGAAAATGTTTGA+TGG | - | chr5.4:3373547-3373566 | None:intergenic | 15.0% |
| !! | ATATTTAAAGATAAGAATGA+AGG | + | chr5.4:3369869-3369888 | MS.gene058149:intron | 15.0% |
| !! | CCTTTAATAAAGTATAAATA+AGG | + | chr5.4:3373189-3373208 | MS.gene058149:intron | 15.0% |
| !! | TAGTTAGATATTTAAGAAAA+AGG | + | chr5.4:3371949-3371968 | MS.gene058149:intron | 15.0% |
| !! | TATTATTATATCATACGATT+AGG | + | chr5.4:3372706-3372725 | MS.gene058149:intron | 15.0% |
| !! | TGATTAATTATTTACCTATT+CGG | - | chr5.4:3369957-3369976 | None:intergenic | 15.0% |
| !! | TGTAATAACTAAAAATCAAA+TGG | - | chr5.4:3370132-3370151 | None:intergenic | 15.0% |
| !! | TTTATTCCTATAGAAATATT+TGG | + | chr5.4:3371442-3371461 | MS.gene058149:intron | 15.0% |
| !!! | AATAGTCATAATATTGATTT+TGG | - | chr5.4:3369402-3369421 | None:intergenic | 15.0% |
| !!! | ACATTATATATTTTTCATAC+AGG | + | chr5.4:3373695-3373714 | MS.gene058149:intron | 15.0% |
| !!! | CCTTATTTATACTTTATTAA+AGG | - | chr5.4:3373192-3373211 | None:intergenic | 15.0% |
| !!! | CTTTTGACATTATTATTATT+AGG | + | chr5.4:3372428-3372447 | MS.gene058149:intron | 15.0% |
| !!! | TATTTATTCTTTTTATCATG+TGG | + | chr5.4:3373560-3373579 | MS.gene058149:intron | 15.0% |
| !!! | TTTTTCATTTGTTATATTGT+AGG | + | chr5.4:3369280-3369299 | MS.gene058149:intron | 15.0% |
| !! | AAAGTAAAAGGGAAAAATAA+AGG | - | chr5.4:3371407-3371426 | None:intergenic | 20.0% |
| !! | AATCAATTATAACTGTGATA+TGG | + | chr5.4:3369628-3369647 | MS.gene058149:intron | 20.0% |
| !! | ATAAACAATGTAGTTTACTT+AGG | - | chr5.4:3370422-3370441 | None:intergenic | 20.0% |
| !! | ATTATATCATCATCTAATCA+AGG | - | chr5.4:3370750-3370769 | None:intergenic | 20.0% |
| !! | ATTGAAGAAAGAAAGTAAAA+GGG | - | chr5.4:3371418-3371437 | None:intergenic | 20.0% |
| !! | GCATTCATTATATTGTATTA+TGG | + | chr5.4:3374319-3374338 | MS.gene058149:intron | 20.0% |
| !! | TACATCTTCCTAAATATATT+AGG | - | chr5.4:3374380-3374399 | None:intergenic | 20.0% |
| !! | TATTCTGTCCTAATATATTT+AGG | + | chr5.4:3374369-3374388 | MS.gene058149:intron | 20.0% |
| !!! | AAAAATTTGGTGTCTTTATT+TGG | + | chr5.4:3370790-3370809 | MS.gene058149:intron | 20.0% |
| !!! | AAAATTGCATTTTTTGTGTT+AGG | - | chr5.4:3372505-3372524 | None:intergenic | 20.0% |
| !!! | AAATTGCATTTTTTGTGTTA+GGG | - | chr5.4:3372504-3372523 | None:intergenic | 20.0% |
| !!! | AAGGAAATTTAATTTTGTTC+TGG | + | chr5.4:3370973-3370992 | MS.gene058149:intron | 20.0% |
| !!! | ATTTTCTTGACATTTTTTTG+TGG | + | chr5.4:3371925-3371944 | MS.gene058149:intron | 20.0% |
| !!! | GCTAATGCATTTTTAATTAA+TGG | + | chr5.4:3369558-3369577 | MS.gene058149:intron | 20.0% |
| !!! | TTAGGATATGTTGAATATTT+TGG | + | chr5.4:3372724-3372743 | MS.gene058149:intron | 20.0% |
| !!! | TTATCTTATTTTATTGTCTC+CGG | + | chr5.4:3370593-3370612 | MS.gene058149:intron | 20.0% |
| !!! | TTTTTTGATGAACCAAAATA+AGG | + | chr5.4:3373224-3373243 | MS.gene058149:intron | 20.0% |
| ! | AAACTAACATCATTTGTTTC+TGG | - | chr5.4:3369375-3369394 | None:intergenic | 25.0% |
| ! | AAAGAAGATAATTTGGCATT+TGG | - | chr5.4:3371108-3371127 | None:intergenic | 25.0% |
| ! | AATATGATGATTCGAAGAAA+TGG | + | chr5.4:3372156-3372175 | MS.gene058149:CDS | 25.0% |
| ! | AATGCAAATGAAAACAGATA+AGG | - | chr5.4:3371852-3371871 | None:intergenic | 25.0% |
| ! | AATGCTATTCATGAAACAAA+TGG | + | chr5.4:3373369-3373388 | MS.gene058149:intron | 25.0% |
| ! | ATCAATTTCATTAGCTAGAA+TGG | + | chr5.4:3373884-3373903 | MS.gene058149:intron | 25.0% |
| ! | ATGAAAATGTTTGATGGAAA+GGG | - | chr5.4:3373541-3373560 | None:intergenic | 25.0% |
| ! | ATGACAAAAATTTATCTGAG+AGG | - | chr5.4:3373729-3373748 | None:intergenic | 25.0% |
| ! | ATTCATATCCATGCAATATT+AGG | - | chr5.4:3373512-3373531 | None:intergenic | 25.0% |
| ! | CAAAAACTAAAACAATGCAA+GGG | - | chr5.4:3373808-3373827 | None:intergenic | 25.0% |
| ! | CATTGAAGAAAGAAAGTAAA+AGG | - | chr5.4:3371419-3371438 | None:intergenic | 25.0% |
| ! | CTAAAAATCAAATGGCAATT+TGG | - | chr5.4:3370124-3370143 | None:intergenic | 25.0% |
| ! | GCGGATCAATAAAATTATAT+TGG | - | chr5.4:3373277-3373296 | None:intergenic | 25.0% |
| ! | GCTGTTATAAAGGAATTATA+TGG | + | chr5.4:3370514-3370533 | MS.gene058149:CDS | 25.0% |
| ! | TATAATTAAGGAGAAAGCTA+GGG | + | chr5.4:3370310-3370329 | MS.gene058149:CDS | 25.0% |
| ! | TATAGGGTTTAATACAATGT+GGG | + | chr5.4:3373105-3373124 | MS.gene058149:intron | 25.0% |
| ! | TATGAAAATGTTTGATGGAA+AGG | - | chr5.4:3373542-3373561 | None:intergenic | 25.0% |
| ! | TGATGATATAATACAACTCT+TGG | + | chr5.4:3370758-3370777 | MS.gene058149:intron | 25.0% |
| ! | TTATAGGGTTTAATACAATG+TGG | + | chr5.4:3373104-3373123 | MS.gene058149:intron | 25.0% |
| ! | TTGGAGATAAGATATTAAGT+TGG | - | chr5.4:3373938-3373957 | None:intergenic | 25.0% |
| ! | TTGGTCACTTAAAGTAAAAT+TGG | + | chr5.4:3370673-3370692 | MS.gene058149:intron | 25.0% |
| ! | TTTATTTGGTAGAATTGAAG+GGG | + | chr5.4:3370804-3370823 | MS.gene058149:intron | 25.0% |
| !! | AACCTTTTTGTAAAGATAAG+GGG | - | chr5.4:3372571-3372590 | None:intergenic | 25.0% |
| !! | AAGGAAAAAGGACTATATTT+TGG | - | chr5.4:3372225-3372244 | None:intergenic | 25.0% |
| !! | AATTATAGAGTTGGTCATTT+AGG | - | chr5.4:3373323-3373342 | None:intergenic | 25.0% |
| !! | CAACCTTTTTGTAAAGATAA+GGG | - | chr5.4:3372572-3372591 | None:intergenic | 25.0% |
| !! | CTGGTTATTACAAAGATTTT+GGG | + | chr5.4:3370992-3371011 | MS.gene058149:intron | 25.0% |
| !! | CTTCGAATCATCATATTTTA+TGG | - | chr5.4:3372153-3372172 | None:intergenic | 25.0% |
| !! | CTTTATTTGGTAGAATTGAA+GGG | + | chr5.4:3370803-3370822 | MS.gene058149:intron | 25.0% |
| !! | TATTTTTCATACAGGTATGA+AGG | + | chr5.4:3373703-3373722 | MS.gene058149:intron | 25.0% |
| !! | TCTGGTTATTACAAAGATTT+TGG | + | chr5.4:3370991-3371010 | MS.gene058149:intron | 25.0% |
| !! | TCTTTATTTGGTAGAATTGA+AGG | + | chr5.4:3370802-3370821 | MS.gene058149:intron | 25.0% |
| !! | TGGTTATTACAAAGATTTTG+GGG | + | chr5.4:3370993-3371012 | MS.gene058149:intron | 25.0% |
| !! | TTAGAATCTTTTGCACAATA+AGG | - | chr5.4:3373607-3373626 | None:intergenic | 25.0% |
| !!! | AATTGCATTTTTTGTGTTAG+GGG | - | chr5.4:3372503-3372522 | None:intergenic | 25.0% |
| !!! | ATTTTAAGTTATCCGATACA+TGG | + | chr5.4:3371869-3371888 | MS.gene058149:intron | 25.0% |
| !!! | GGTGTTATAGTTATATTTTG+TGG | + | chr5.4:3370839-3370858 | MS.gene058149:intron | 25.0% |
| !!! | TTGTTTTGGTGAATTTTGAA+TGG | + | chr5.4:3372038-3372057 | MS.gene058149:intron | 25.0% |
| AACATAGTTGGGAAAATTAG+GGG | + | chr5.4:3372631-3372650 | MS.gene058149:intron | 30.0% | |
| AAGACTGAACAATATTGGAA+AGG | + | chr5.4:3372345-3372364 | MS.gene058149:CDS | 30.0% | |
| AAGCATCATCTATGCTATAT+TGG | + | chr5.4:3370883-3370902 | MS.gene058149:intron | 30.0% | |
| AAGCCTGTAATGAAATAATG+TGG | - | chr5.4:3370270-3370289 | None:intergenic | 30.0% | |
| AAGTTGTAGTAAAAGCAATG+AGG | - | chr5.4:3371687-3371706 | None:intergenic | 30.0% | |
| ACGAGGAAAAGAAGATAATT+TGG | - | chr5.4:3371115-3371134 | None:intergenic | 30.0% | |
| ACTTAGGATGACATAGATAA+AGG | - | chr5.4:3371975-3371994 | None:intergenic | 30.0% | |
| AGAGTATATTTCCCTAAAGA+TGG | - | chr5.4:3372543-3372562 | None:intergenic | 30.0% | |
| AGTTGGTCATTTAGGTATTT+AGG | - | chr5.4:3373315-3373334 | None:intergenic | 30.0% | |
| ATAATTTGGCATTTGGCTAA+TGG | - | chr5.4:3371101-3371120 | None:intergenic | 30.0% | |
| ATTGCTACGAATGCAAATAT+AGG | + | chr5.4:3372660-3372679 | MS.gene058149:intron | 30.0% | |
| CAACATAGTTGGGAAAATTA+GGG | + | chr5.4:3372630-3372649 | MS.gene058149:intron | 30.0% | |
| CAATGAGGAACTTAACTATT+AGG | - | chr5.4:3371672-3371691 | None:intergenic | 30.0% | |
| CATGTTCTTGTATGAAAAAC+CGG | - | chr5.4:3370615-3370634 | None:intergenic | 30.0% | |
| CCAAAAACTAAAACAATGCA+AGG | - | chr5.4:3373809-3373828 | None:intergenic | 30.0% | |
| CTAGAATGGAATTAAACATC+TGG | + | chr5.4:3373898-3373917 | MS.gene058149:intron | 30.0% | |
| GAACTTAACTATTAGGAAGT+TGG | - | chr5.4:3371665-3371684 | None:intergenic | 30.0% | |
| GTATAATTAAGGAGAAAGCT+AGG | + | chr5.4:3370309-3370328 | MS.gene058149:CDS | 30.0% | |
| GTTAATTGCCTAATATTGCA+TGG | + | chr5.4:3373501-3373520 | MS.gene058149:intron | 30.0% | |
| GTTATATTGTAGGAGTTCTT+CGG | + | chr5.4:3369290-3369309 | MS.gene058149:intron | 30.0% | |
| GTTGGTCATTTAGGTATTTA+GGG | - | chr5.4:3373314-3373333 | None:intergenic | 30.0% | |
| TAAGCAGTGCATAATAACTT+AGG | - | chr5.4:3371991-3372010 | None:intergenic | 30.0% | |
| TAAGCATAAAACGAAGTCTA+TGG | - | chr5.4:3372271-3372290 | None:intergenic | 30.0% | |
| TAGGGAGAAAAATAAATACG+CGG | - | chr5.4:3373296-3373315 | None:intergenic | 30.0% | |
| TAGTTTCAGTGCATTTAATC+TGG | - | chr5.4:3370713-3370732 | None:intergenic | 30.0% | |
| TCAACATAGTTGGGAAAATT+AGG | + | chr5.4:3372629-3372648 | MS.gene058149:intron | 30.0% | |
| TGATTGTCACAAGAATTTCA+GGG | + | chr5.4:3371734-3371753 | MS.gene058149:intron | 30.0% | |
| TGGAAAAGACTGAACAATAT+TGG | + | chr5.4:3372340-3372359 | MS.gene058149:CDS | 30.0% | |
| TTACAAAAAGGTTGCGATTA+TGG | + | chr5.4:3372578-3372597 | MS.gene058149:intron | 30.0% | |
| TTACTACAACTTACTAGTCA+CGG | + | chr5.4:3371695-3371714 | MS.gene058149:intron | 30.0% | |
| TTAGTTTCATGGTTGTAGTT+AGG | - | chr5.4:3369989-3370008 | None:intergenic | 30.0% | |
| TTATTTGGTAGAATTGAAGG+GGG | + | chr5.4:3370805-3370824 | MS.gene058149:intron | 30.0% | |
| TTGATTGTCACAAGAATTTC+AGG | + | chr5.4:3371733-3371752 | MS.gene058149:intron | 30.0% | |
| TTGCTACGAATGCAAATATA+GGG | + | chr5.4:3372661-3372680 | MS.gene058149:intron | 30.0% | |
| TTGTATGTGATTGCTAAACT+TGG | + | chr5.4:3371275-3371294 | MS.gene058149:intron | 30.0% | |
| TTGTGCAAAAGATTCTAAAC+AGG | + | chr5.4:3373609-3373628 | MS.gene058149:intron | 30.0% | |
| TTTATCCATCATCAAAGCAT+GGG | + | chr5.4:3371552-3371571 | MS.gene058149:intron | 30.0% | |
| TTTATTGCTCGTAACCAAAT+AGG | + | chr5.4:3374430-3374449 | MS.gene058149:CDS | 30.0% | |
| ! | AGGTTATCATGGATTATTGT+AGG | + | chr5.4:3373479-3373498 | MS.gene058149:intron | 30.0% |
| ! | AGTGTTGGAAATTATAGAGT+TGG | - | chr5.4:3373332-3373351 | None:intergenic | 30.0% |
| ! | ATAATACAACTCTTGGTAAC+TGG | + | chr5.4:3370765-3370784 | MS.gene058149:intron | 30.0% |
| ! | ATAGCATTTGTTAACTACTG+TGG | - | chr5.4:3373357-3373376 | None:intergenic | 30.0% |
| ! | ATCATCATATTTTATGGTGG+TGG | - | chr5.4:3372147-3372166 | None:intergenic | 30.0% |
| ! | ATTCAAGTTAGTCGATAAAG+TGG | - | chr5.4:3370639-3370658 | None:intergenic | 30.0% |
| ! | ATTCAGTTTGCTCATAAACT+CGG | - | chr5.4:3374145-3374164 | None:intergenic | 30.0% |
| ! | ATTTGCATTCGTAGCAATTT+TGG | - | chr5.4:3372658-3372677 | None:intergenic | 30.0% |
| ! | CAGTTATCATCAACACTTTT+TGG | - | chr5.4:3373957-3373976 | None:intergenic | 30.0% |
| ! | CGAATCATCATATTTTATGG+TGG | - | chr5.4:3372150-3372169 | None:intergenic | 30.0% |
| ! | GACTTCGTTTTATGCTTAAT+TGG | + | chr5.4:3372273-3372292 | MS.gene058149:intron | 30.0% |
| ! | GCAACCTTTTTGTAAAGATA+AGG | - | chr5.4:3372573-3372592 | None:intergenic | 30.0% |
| ! | GGTTCACCAAATATTTCTAT+AGG | - | chr5.4:3371451-3371470 | None:intergenic | 30.0% |
| ! | TAATACAACTCTTGGTAACT+GGG | + | chr5.4:3370766-3370785 | MS.gene058149:intron | 30.0% |
| ! | TAATCTGAAACTGATAACTC+TGG | + | chr5.4:3374072-3374091 | MS.gene058149:intron | 30.0% |
| ! | TCAGGTTTTTCATCTTTACA+TGG | + | chr5.4:3369479-3369498 | MS.gene058149:intron | 30.0% |
| ! | TCATCATATTTTATGGTGGT+GGG | - | chr5.4:3372146-3372165 | None:intergenic | 30.0% |
| ! | TGAGAGGAAGATTATCTTTT+AGG | + | chr5.4:3372767-3372786 | MS.gene058149:intron | 30.0% |
| ! | TGTCACAACTGTTTTCAATT+TGG | + | chr5.4:3371893-3371912 | MS.gene058149:intron | 30.0% |
| ! | TTGGTAACTGGGTAAAAATT+TGG | + | chr5.4:3370777-3370796 | MS.gene058149:intron | 30.0% |
| ! | TTTTATCCATCATCAAAGCA+TGG | + | chr5.4:3371551-3371570 | MS.gene058149:intron | 30.0% |
| ! | TTTTGTGATTCTACAGAGAA+AGG | + | chr5.4:3372903-3372922 | MS.gene058149:intron | 30.0% |
| !! | ACAAGTGGTATTCCTTATTT+TGG | - | chr5.4:3373239-3373258 | None:intergenic | 30.0% |
| !! | CCTGTTGTATTTTGTTTACA+CGG | + | chr5.4:3369516-3369535 | MS.gene058149:CDS | 30.0% |
| !! | TATTACAAAGATTTTGGGGA+TGG | + | chr5.4:3370997-3371016 | MS.gene058149:intron | 30.0% |
| !! | TGATGTATTGGCTGTTATAA+AGG | + | chr5.4:3370504-3370523 | MS.gene058149:CDS | 30.0% |
| !!! | ATTGCATTTTTTGTGTTAGG+GGG | - | chr5.4:3372502-3372521 | None:intergenic | 30.0% |
| !!! | CCTTGCATTGTTTTAGTTTT+TGG | + | chr5.4:3373806-3373825 | MS.gene058149:intron | 30.0% |
| !!! | GAGTGTTGTTTCATTTGTTT+TGG | + | chr5.4:3372024-3372043 | MS.gene058149:intron | 30.0% |
| !!! | GGAAGATTATCTTTTAGGAT+CGG | + | chr5.4:3372772-3372791 | MS.gene058149:intron | 30.0% |
| !!! | TGATTTTGACTTATCTGTTG+AGG | + | chr5.4:3370379-3370398 | MS.gene058149:CDS | 30.0% |
| AAATACACAGACCAATCCAA+CGG | - | chr5.4:3369327-3369346 | None:intergenic | 35.0% | |
| AAGGAAATCATTGTCAACCT+TGG | + | chr5.4:3371602-3371621 | MS.gene058149:CDS | 35.0% | |
| AATGAATGCAGCAAGAAACA+TGG | - | chr5.4:3374308-3374327 | None:intergenic | 35.0% | |
| AATGTTGCATCCTATTTGAG+AGG | - | chr5.4:3371796-3371815 | None:intergenic | 35.0% | |
| ACAACAAGTAAAGGTTTCTC+TGG | - | chr5.4:3373859-3373878 | None:intergenic | 35.0% | |
| ACAAGAGTTGCAAATTCATC+AGG | - | chr5.4:3374403-3374422 | None:intergenic | 35.0% | |
| ACATAGTTGGGAAAATTAGG+GGG | + | chr5.4:3372632-3372651 | MS.gene058149:intron | 35.0% | |
| ACCACTTGTGTTCTGTAATA+AGG | + | chr5.4:3373250-3373269 | MS.gene058149:intron | 35.0% | |
| ACCTTATTACAGAACACAAG+TGG | - | chr5.4:3373254-3373273 | None:intergenic | 35.0% | |
| AGAGAGTTGTAAACTCTACA+AGG | + | chr5.4:3369841-3369860 | MS.gene058149:intron | 35.0% | |
| AGATAAGGATACAGAGCTTA+CGG | - | chr5.4:3371837-3371856 | None:intergenic | 35.0% | |
| AGCAAACTGAATTGTTCTAG+TGG | + | chr5.4:3374153-3374172 | MS.gene058149:intron | 35.0% | |
| ATTAGCAGGAACAGATAGAT+TGG | + | chr5.4:3373771-3373790 | MS.gene058149:CDS | 35.0% | |
| CCAGATTGGATAAAGGAAAA+AGG | - | chr5.4:3372237-3372256 | None:intergenic | 35.0% | |
| CCCTAAAGATGGCAAAATTA+GGG | - | chr5.4:3372532-3372551 | None:intergenic | 35.0% | |
| CCGTGTAAACAAAATACAAC+AGG | - | chr5.4:3369519-3369538 | None:intergenic | 35.0% | |
| CCTAAAGATGGCAAAATTAG+GGG | - | chr5.4:3372531-3372550 | None:intergenic | 35.0% | |
| CCTCCACATTATTTCATTAC+AGG | + | chr5.4:3370264-3370283 | MS.gene058149:intron | 35.0% | |
| CCTGTAATGAAATAATGTGG+AGG | - | chr5.4:3370267-3370286 | None:intergenic | 35.0% | |
| CTAAAGATGGCAAAATTAGG+GGG | - | chr5.4:3372530-3372549 | None:intergenic | 35.0% | |
| CTACTCTACTACTTGGAAAT+TGG | - | chr5.4:3373986-3374005 | None:intergenic | 35.0% | |
| GAAAAAGATGAAGATCGAAG+TGG | - | chr5.4:3369241-3369260 | None:intergenic | 35.0% | |
| GACAAATCTAGTCAGATGAA+GGG | - | chr5.4:3371166-3371185 | None:intergenic | 35.0% | |
| GACCCCTTATCTTTACAAAA+AGG | + | chr5.4:3372566-3372585 | MS.gene058149:intron | 35.0% | |
| GAGAGTTGTAAACTCTACAA+GGG | + | chr5.4:3369842-3369861 | MS.gene058149:intron | 35.0% | |
| GATGATGCTTGTCATTAAAC+AGG | - | chr5.4:3370873-3370892 | None:intergenic | 35.0% | |
| GATTCTAAACAGGTAGAACT+AGG | + | chr5.4:3373619-3373638 | MS.gene058149:intron | 35.0% | |
| GGATACAGTTGATCTATAGT+TGG | - | chr5.4:3373171-3373190 | None:intergenic | 35.0% | |
| TAACAGTACGTGCACATTTA+AGG | - | chr5.4:3370175-3370194 | None:intergenic | 35.0% | |
| TAACTAACACGTAACCGAAT+AGG | + | chr5.4:3369940-3369959 | MS.gene058149:intron | 35.0% | |
| TCACAATCTACTCTACTACT+TGG | - | chr5.4:3373993-3374012 | None:intergenic | 35.0% | |
| TCCCTAAAGATGGCAAAATT+AGG | - | chr5.4:3372533-3372552 | None:intergenic | 35.0% | |
| TGAATCTTTGTGAAGCATGT+TGG | + | chr5.4:3370654-3370673 | MS.gene058149:intron | 35.0% | |
| TGATAAGCCACAACAAGTAA+AGG | - | chr5.4:3373868-3373887 | None:intergenic | 35.0% | |
| TGATGATTCGAAGAAATGGT+TGG | + | chr5.4:3372160-3372179 | MS.gene058149:intron | 35.0% | |
| TGCTACGAATGCAAATATAG+GGG | + | chr5.4:3372662-3372681 | MS.gene058149:intron | 35.0% | |
| TGTATCTGCTGTAAAACTGT+AGG | + | chr5.4:3371224-3371243 | MS.gene058149:intron | 35.0% | |
| TGTGTCAACGGGTATAATTA+AGG | + | chr5.4:3370298-3370317 | MS.gene058149:CDS | 35.0% | |
| TTAACTACTGTGGATAGTGT+TGG | - | chr5.4:3373347-3373366 | None:intergenic | 35.0% | |
| TTATCCATCATCAAAGCATG+GGG | + | chr5.4:3371553-3371572 | MS.gene058149:intron | 35.0% | |
| TTATGGTTCTCTTCGTTACT+TGG | + | chr5.4:3374336-3374355 | MS.gene058149:intron | 35.0% | |
| TTATGTTTATCGAACAGAGC+TGG | + | chr5.4:3372320-3372339 | MS.gene058149:CDS | 35.0% | |
| TTGACTTATCTGTTGAGGTA+CGG | + | chr5.4:3370384-3370403 | MS.gene058149:intron | 35.0% | |
| TTGCTTGTATGCAGATTGAA+TGG | + | chr5.4:3372069-3372088 | MS.gene058149:intron | 35.0% | |
| ! | AACTCAACTCAACTCTGTTT+TGG | - | chr5.4:3371034-3371053 | None:intergenic | 35.0% |
| ! | AGAGAAACCTTTACTTGTTG+TGG | + | chr5.4:3373858-3373877 | MS.gene058149:intron | 35.0% |
| ! | ATAAGGCTTAAACGCACTTT+TGG | - | chr5.4:3372689-3372708 | None:intergenic | 35.0% |
| ! | ATTAGGCTTAAACGCACTTT+TGG | + | chr5.4:3372445-3372464 | MS.gene058149:intron | 35.0% |
| ! | CATTTTTGATGTTGTGTCCA+TGG | + | chr5.4:3369736-3369755 | MS.gene058149:intron | 35.0% |
| ! | CCCTAATTTTGCCATCTTTA+GGG | + | chr5.4:3372529-3372548 | MS.gene058149:intron | 35.0% |
| ! | CCTTTTTCCTTTATCCAATC+TGG | + | chr5.4:3372234-3372253 | MS.gene058149:intron | 35.0% |
| ! | GTTTTTCATCTTTACATGGC+AGG | + | chr5.4:3369483-3369502 | MS.gene058149:CDS | 35.0% |
| ! | TTCAGTTTGCTCATAAACTC+GGG | - | chr5.4:3374144-3374163 | None:intergenic | 35.0% |
| !! | CATCATATTTTATGGTGGTG+GGG | - | chr5.4:3372145-3372164 | None:intergenic | 35.0% |
| !! | GATTGATTGTGATTTGCTGA+CGG | + | chr5.4:3369687-3369706 | MS.gene058149:intron | 35.0% |
| !! | GTTGTATTTTGTTTACACGG+TGG | + | chr5.4:3369519-3369538 | MS.gene058149:CDS | 35.0% |
| AAATCATTGTCAACCTTGGC+TGG | + | chr5.4:3371606-3371625 | MS.gene058149:CDS | 40.0% | |
| AATAACAACAGCTTCGGAAC+AGG | - | chr5.4:3373754-3373773 | None:intergenic | 40.0% | |
| AATCATTGTCAACCTTGGCT+GGG | + | chr5.4:3371607-3371626 | MS.gene058149:CDS | 40.0% | |
| AATTAAGGAGAAAGCTAGGG+TGG | + | chr5.4:3370313-3370332 | MS.gene058149:CDS | 40.0% | |
| ACAACTTACTAGTCACGGAT+GGG | + | chr5.4:3371700-3371719 | MS.gene058149:intron | 40.0% | |
| AGAATTTCAGGGAACAGCAA+TGG | + | chr5.4:3371745-3371764 | MS.gene058149:intron | 40.0% | |
| AGACAGCTAGAGCTGTTATA+GGG | + | chr5.4:3373089-3373108 | MS.gene058149:intron | 40.0% | |
| AGCCAATACATCATTGCACA+TGG | - | chr5.4:3370497-3370516 | None:intergenic | 40.0% | |
| AGCTAGTCCAGATTGGATAA+AGG | - | chr5.4:3372244-3372263 | None:intergenic | 40.0% | |
| AGGAATAAATCGAGCTGGTT+AGG | - | chr5.4:3370052-3370071 | None:intergenic | 40.0% | |
| ATAACAACAGCTTCGGAACA+GGG | - | chr5.4:3373753-3373772 | None:intergenic | 40.0% | |
| ATACATACCACGACTCCATT+AGG | - | chr5.4:3374457-3374476 | None:intergenic | 40.0% | |
| ATGAGGCAGGTAAAAAAACG+AGG | - | chr5.4:3371132-3371151 | None:intergenic | 40.0% | |
| ATGATAGTTGTCAGACACAC+AGG | + | chr5.4:3374258-3374277 | MS.gene058149:CDS | 40.0% | |
| ATTGAAGGGGGACAAATTTC+AGG | + | chr5.4:3370817-3370836 | MS.gene058149:intron | 40.0% | |
| ATTGCTACGATGGCAAACAT+TGG | - | chr5.4:3372474-3372493 | None:intergenic | 40.0% | |
| CAAAAACCAGCAACTGAACA+TGG | - | chr5.4:3370456-3370475 | None:intergenic | 40.0% | |
| CAAGGTCAAACAATTCATCG+AGG | - | chr5.4:3373441-3373460 | None:intergenic | 40.0% | |
| CACCAGTGTAATGAAAAGCA+AGG | - | chr5.4:3372195-3372214 | None:intergenic | 40.0% | |
| CAGTTGTGACAACCATGTAT+CGG | - | chr5.4:3371884-3371903 | None:intergenic | 40.0% | |
| CCTGCTAATAACAACAGCTT+CGG | - | chr5.4:3373760-3373779 | None:intergenic | 40.0% | |
| CGACAAATCTAGTCAGATGA+AGG | - | chr5.4:3371167-3371186 | None:intergenic | 40.0% | |
| CTCACAATTGGTCAAATGCA+AGG | + | chr5.4:3374225-3374244 | MS.gene058149:CDS | 40.0% | |
| CTGAACAATATTGGAAAGGC+TGG | + | chr5.4:3372349-3372368 | MS.gene058149:CDS | 40.0% | |
| GAAGAAGGTGGTTACTTAGT+TGG | - | chr5.4:3369210-3369229 | None:intergenic | 40.0% | |
| GAAGTGGAAGAAGAAGAAGA+AGG | - | chr5.4:3369225-3369244 | None:intergenic | 40.0% | |
| GACCATGTGCAATGATGTAT+TGG | + | chr5.4:3370492-3370511 | MS.gene058149:intron | 40.0% | |
| GATTGTTGTGGATGTTGTAG+AGG | + | chr5.4:3371632-3371651 | MS.gene058149:CDS | 40.0% | |
| GCTACGAATGCAAATATAGG+GGG | + | chr5.4:3372663-3372682 | MS.gene058149:intron | 40.0% | |
| GGAATAAATCGAGCTGGTTA+GGG | - | chr5.4:3370051-3370070 | None:intergenic | 40.0% | |
| GTAATGAAAAGCAAGGAGAG+AGG | - | chr5.4:3372188-3372207 | None:intergenic | 40.0% | |
| GTTTACGATTGTCCTGCAAA+TGG | + | chr5.4:3374500-3374519 | MS.gene058149:intron | 40.0% | |
| TACAACTTACTAGTCACGGA+TGG | + | chr5.4:3371699-3371718 | MS.gene058149:intron | 40.0% | |
| TACATACCACGACTCCATTA+GGG | - | chr5.4:3374456-3374475 | None:intergenic | 40.0% | |
| TAGACAGCTAGAGCTGTTAT+AGG | + | chr5.4:3373088-3373107 | MS.gene058149:intron | 40.0% | |
| TATCCATCATCAAAGCATGG+GGG | + | chr5.4:3371554-3371573 | MS.gene058149:intron | 40.0% | |
| TCCTTCGTTGAACTTCACAT+GGG | - | chr5.4:3370953-3370972 | None:intergenic | 40.0% | |
| TGATAGTTGTCAGACACACA+GGG | + | chr5.4:3374259-3374278 | MS.gene058149:CDS | 40.0% | |
| TGCAGCAAATCCTCTCAAAT+AGG | + | chr5.4:3371783-3371802 | MS.gene058149:CDS | 40.0% | |
| TGTAACAGGTCTCTCACAAT+TGG | + | chr5.4:3374213-3374232 | MS.gene058149:intron | 40.0% | |
| TGTGAAGTTCAACGAAGGAA+AGG | + | chr5.4:3370954-3370973 | MS.gene058149:intron | 40.0% | |
| TTCCTTCGTTGAACTTCACA+TGG | - | chr5.4:3370954-3370973 | None:intergenic | 40.0% | |
| TTGAAGGGGGACAAATTTCA+GGG | + | chr5.4:3370818-3370837 | MS.gene058149:intron | 40.0% | |
| TTGCTACGATGGCAAACATT+GGG | - | chr5.4:3372473-3372492 | None:intergenic | 40.0% | |
| ! | CCCCTAATTTTGCCATCTTT+AGG | + | chr5.4:3372528-3372547 | MS.gene058149:intron | 40.0% |
| ! | GTTTGCCATCGTAGCAATTT+TGG | + | chr5.4:3372476-3372495 | MS.gene058149:intron | 40.0% |
| ! | TCAGTTTGCTCATAAACTCG+GGG | - | chr5.4:3374143-3374162 | None:intergenic | 40.0% |
| ! | TTGTCGCAGAGTTAGTTTCA+TGG | - | chr5.4:3370000-3370019 | None:intergenic | 40.0% |
| !! | ACAGTATTGGTACCATTTGC+AGG | - | chr5.4:3374515-3374534 | None:intergenic | 40.0% |
| !! | ATTGGCACTGTTTCTGTAAC+AGG | + | chr5.4:3374199-3374218 | MS.gene058149:intron | 40.0% |
| !! | CTCCTTGCTTTTCATTACAC+TGG | + | chr5.4:3372190-3372209 | MS.gene058149:intron | 40.0% |
| !! | CTTGCTTTTCATTACACTGG+TGG | + | chr5.4:3372193-3372212 | MS.gene058149:intron | 40.0% |
| !! | CTTTCATTTGCTGTGTCAAC+GGG | + | chr5.4:3370287-3370306 | MS.gene058149:CDS | 40.0% |
| !! | GCTTTCATTTGCTGTGTCAA+CGG | + | chr5.4:3370286-3370305 | MS.gene058149:CDS | 40.0% |
| !! | GTATTTTGTTTACACGGTGG+TGG | + | chr5.4:3369522-3369541 | MS.gene058149:CDS | 40.0% |
| !! | TTTATCCAATCTGGACTAGC+TGG | + | chr5.4:3372243-3372262 | MS.gene058149:intron | 40.0% |
| AGAAATACGCACCGTTGGAT+TGG | + | chr5.4:3369313-3369332 | MS.gene058149:CDS | 45.0% | |
| ATCCATCATCAAAGCATGGG+GGG | + | chr5.4:3371555-3371574 | MS.gene058149:intron | 45.0% | |
| CAATTATCCTCGTTGGTCAC+AGG | + | chr5.4:3370551-3370570 | MS.gene058149:CDS | 45.0% | |
| CAGAAAGTGATAACCGAGTC+AGG | - | chr5.4:3371477-3371496 | None:intergenic | 45.0% | |
| CAGGAACAGATAGATTGGAC+AGG | + | chr5.4:3373776-3373795 | MS.gene058149:CDS | 45.0% | |
| CATCCTTAACCTGCTAGTGT+AGG | - | chr5.4:3373026-3373045 | None:intergenic | 45.0% | |
| CCATGGAGTGACATGGAAAT+CGG | + | chr5.4:3369753-3369772 | MS.gene058149:intron | 45.0% | |
| CGTAACCAAATAGGCCCTAA+TGG | + | chr5.4:3374439-3374458 | MS.gene058149:CDS | 45.0% | |
| CTTTACATGGCAGGAACTGA+GGG | + | chr5.4:3369492-3369511 | MS.gene058149:CDS | 45.0% | |
| GAAGGTGGTTACTTAGTTGG+AGG | - | chr5.4:3369207-3369226 | None:intergenic | 45.0% | |
| GCACAGATCTTTCATGTGTG+AGG | - | chr5.4:3370072-3370091 | None:intergenic | 45.0% | |
| GCAGATTGAATGGAGTGTGA+GGG | + | chr5.4:3372079-3372098 | MS.gene058149:intron | 45.0% | |
| GTGGAAGAAGAAGAAGAAGG+TGG | - | chr5.4:3369222-3369241 | None:intergenic | 45.0% | |
| GTGTGAGGAATAAATCGAGC+TGG | - | chr5.4:3370057-3370076 | None:intergenic | 45.0% | |
| GTTGTGGATGTTGTAGAGGT+TGG | + | chr5.4:3371636-3371655 | MS.gene058149:intron | 45.0% | |
| TAAATCACCTGTGACCAACG+AGG | - | chr5.4:3370561-3370580 | None:intergenic | 45.0% | |
| TAACAACAGCTTCGGAACAG+GGG | - | chr5.4:3373752-3373771 | None:intergenic | 45.0% | |
| TACTTAGTTGGAGGACGTTG+AGG | - | chr5.4:3369198-3369217 | None:intergenic | 45.0% | |
| TCTTTACATGGCAGGAACTG+AGG | + | chr5.4:3369491-3369510 | MS.gene058149:CDS | 45.0% | |
| TGACCAACGAGGATAATTGC+TGG | - | chr5.4:3370550-3370569 | None:intergenic | 45.0% | |
| TGACCTACACTAGCAGGTTA+AGG | + | chr5.4:3373020-3373039 | MS.gene058149:intron | 45.0% | |
| TGCAGATTGAATGGAGTGTG+AGG | + | chr5.4:3372078-3372097 | MS.gene058149:intron | 45.0% | |
| TGCTACGATGGCAAACATTG+GGG | - | chr5.4:3372472-3372491 | None:intergenic | 45.0% | |
| TTGACTGACTGACACATGTC+AGG | + | chr5.4:3373047-3373066 | MS.gene058149:intron | 45.0% | |
| TTGAGGAGCAGAAGCGAAAA+CGG | - | chr5.4:3369181-3369200 | None:intergenic | 45.0% | |
| TTGATCGTCGGTGATGTCTT+CGG | - | chr5.4:3369142-3369161 | None:intergenic | 45.0% | |
| TTGCTGTGCATATTGCTGCA+AGG | + | chr5.4:3371583-3371602 | MS.gene058149:CDS | 45.0% | |
| ! | CCGAAGCTGTTGTTATTAGC+AGG | + | chr5.4:3373757-3373776 | MS.gene058149:CDS | 45.0% |
| ! | TACACGGTGGTGGTTATTCT+GGG | + | chr5.4:3369532-3369551 | MS.gene058149:CDS | 45.0% |
| ! | TTACACGGTGGTGGTTATTC+TGG | + | chr5.4:3369531-3369550 | MS.gene058149:CDS | 45.0% |
| !! | AAGATCGCGGGTGTTATTGA+TGG | + | chr5.4:3370018-3370037 | MS.gene058149:intron | 45.0% |
| !! | AGATCGCGGGTGTTATTGAT+GGG | + | chr5.4:3370019-3370038 | MS.gene058149:intron | 45.0% |
| !!! | GCGATTATGGCCCCTTTTTT+GGG | + | chr5.4:3372591-3372610 | MS.gene058149:intron | 45.0% |
| !!! | TGCGATTATGGCCCCTTTTT+TGG | + | chr5.4:3372590-3372609 | MS.gene058149:intron | 45.0% |
| !! | TAATTATTATAATAATAATG+AGG | + | chr5.4:3372809-3372828 | MS.gene058149:intron | 5.0% |
| !!! | ATATAAATGATAATTAATTT+TGG | + | chr5.4:3371499-3371518 | MS.gene058149:intron | 5.0% |
| !!! | TAATTTTTGTTTTTTTTTAT+TGG | + | chr5.4:3374181-3374200 | MS.gene058149:intron | 5.0% |
| AATAGGCCCTAATGGAGTCG+TGG | + | chr5.4:3374447-3374466 | MS.gene058149:CDS | 50.0% | |
| ACACACAGGGCATGCTATTC+AGG | + | chr5.4:3374272-3374291 | MS.gene058149:CDS | 50.0% | |
| ACCAAAGCTCGTGGAAGCTT+TGG | - | chr5.4:3373139-3373158 | None:intergenic | 50.0% | |
| ACCAAAGCTTCCACGAGCTT+TGG | + | chr5.4:3373135-3373154 | MS.gene058149:intron | 50.0% | |
| ACCTGCTAGTGTAGGTCACA+AGG | - | chr5.4:3373018-3373037 | None:intergenic | 50.0% | |
| AGCAGAAGCGAAAACGGAAG+CGG | - | chr5.4:3369175-3369194 | None:intergenic | 50.0% | |
| AGTCAGATGAAGGGAAGCTG+TGG | - | chr5.4:3371157-3371176 | None:intergenic | 50.0% | |
| AGTGATAACCGAGTCAGGCT+AGG | - | chr5.4:3371472-3371491 | None:intergenic | 50.0% | |
| ATTGAATGGAGTGTGAGGGC+TGG | + | chr5.4:3372083-3372102 | MS.gene058149:CDS | 50.0% | |
| CACAACAATCAACCCAGCCA+AGG | - | chr5.4:3371622-3371641 | None:intergenic | 50.0% | |
| CCAACGAGGATAATTGCTGG+AGG | - | chr5.4:3370547-3370566 | None:intergenic | 50.0% | |
| CCATGATAACCTCCATCTGC+AGG | - | chr5.4:3373471-3373490 | None:intergenic | 50.0% | |
| CCGATTTCCATGTCACTCCA+TGG | - | chr5.4:3369756-3369775 | None:intergenic | 50.0% | |
| CCTCCAGCAATTATCCTCGT+TGG | + | chr5.4:3370544-3370563 | MS.gene058149:CDS | 50.0% | |
| CCTGCAGATGGAGGTTATCA+TGG | + | chr5.4:3373468-3373487 | MS.gene058149:intron | 50.0% | |
| CGACTCCATTAGGGCCTATT+TGG | - | chr5.4:3374447-3374466 | None:intergenic | 50.0% | |
| CTAACTCTGCGACAAGATCG+CGG | + | chr5.4:3370005-3370024 | MS.gene058149:intron | 50.0% | |
| GCCCATGTGAAGTTCAACGA+AGG | + | chr5.4:3370949-3370968 | MS.gene058149:intron | 50.0% | |
| GCTACGATGGCAAACATTGG+GGG | - | chr5.4:3372471-3372490 | None:intergenic | 50.0% | |
| GGCGGCTTCTCAACATAGTT+GGG | + | chr5.4:3372620-3372639 | MS.gene058149:intron | 50.0% | |
| GTTGTGTCCATGGAGTGACA+TGG | + | chr5.4:3369746-3369765 | MS.gene058149:intron | 50.0% | |
| TAACTCTGCGACAAGATCGC+GGG | + | chr5.4:3370006-3370025 | MS.gene058149:intron | 50.0% | |
| TCCATCATCAAAGCATGGGG+GGG | + | chr5.4:3371556-3371575 | MS.gene058149:intron | 50.0% | |
| TGATCGTCGGTGATGTCTTC+GGG | - | chr5.4:3369141-3369160 | None:intergenic | 50.0% | |
| TGGAACCAGCTAGTCCAGAT+TGG | - | chr5.4:3372251-3372270 | None:intergenic | 50.0% | |
| TGGCGGCTTCTCAACATAGT+TGG | + | chr5.4:3372619-3372638 | MS.gene058149:intron | 50.0% | |
| TGTGTGCCATGTTCAGTTGC+TGG | + | chr5.4:3370447-3370466 | MS.gene058149:intron | 50.0% | |
| TTCGGAGAAATACGCACCGT+TGG | + | chr5.4:3369308-3369327 | MS.gene058149:CDS | 50.0% | |
| TTGGTGAACCTAGCCTGACT+CGG | + | chr5.4:3371461-3371480 | MS.gene058149:intron | 50.0% | |
| ! | AAAGCTCGTGGAAGCTTTGG+TGG | - | chr5.4:3373136-3373155 | None:intergenic | 50.0% |
| !! | CTTGGCTGGGTTGATTGTTG+TGG | + | chr5.4:3371620-3371639 | MS.gene058149:CDS | 50.0% |
| ACCCCCCCATGCTTTGATGA+TGG | - | chr5.4:3371560-3371579 | None:intergenic | 55.0% | |
| CCATCTGCAGGACAGATGCA+AGG | - | chr5.4:3373459-3373478 | None:intergenic | 55.0% | |
| CCGCCACGTGTCCCAAAAAA+GGG | - | chr5.4:3372605-3372624 | None:intergenic | 55.0% | |
| CCTTGCATCTGTCCTGCAGA+TGG | + | chr5.4:3373456-3373475 | MS.gene058149:intron | 55.0% | |
| CGCCACGTGTCCCAAAAAAG+GGG | - | chr5.4:3372604-3372623 | None:intergenic | 55.0% | |
| GAAAGCTAGGGTGGTTGCGA+TGG | + | chr5.4:3370322-3370341 | MS.gene058149:CDS | 55.0% | |
| GATCGTCGGTGATGTCTTCG+GGG | - | chr5.4:3369140-3369159 | None:intergenic | 55.0% | |
| GCAGAAGCGAAAACGGAAGC+GGG | - | chr5.4:3369174-3369193 | None:intergenic | 55.0% | |
| GCCTTGTGACCTACACTAGC+AGG | + | chr5.4:3373014-3373033 | MS.gene058149:intron | 55.0% | |
| GGGGGCCAAAATTGCTACGA+TGG | - | chr5.4:3372669-3372650 | None:intergenic | 55.0% | |
| GGGTTGTGGTGGTTGATCGT+CGG | - | chr5.4:3369154-3369173 | None:intergenic | 55.0% | |
| TCTGTCCTGACCAAAGCTCG+TGG | - | chr5.4:3373148-3373167 | None:intergenic | 55.0% | |
| TGCATCTGTCCTGCAGATGG+AGG | + | chr5.4:3373459-3373478 | MS.gene058149:intron | 55.0% | |
| ! | AGCTTCCACGAGCTTTGGTC+AGG | + | chr5.4:3373140-3373159 | MS.gene058149:intron | 55.0% |
| ! | GAAGGGAAGCTGTGGTGATG+AGG | - | chr5.4:3371149-3371168 | None:intergenic | 55.0% |
| ! | GCGATGGACTTGAGAGGTCA+TGG | + | chr5.4:3370338-3370357 | MS.gene058149:CDS | 55.0% |
| ! | GTGGTTGCGATGGACTTGAG+AGG | + | chr5.4:3370332-3370351 | MS.gene058149:CDS | 55.0% |
| !! | AAAACGGAAGCGGGTTGTGG+TGG | - | chr5.4:3369165-3369184 | None:intergenic | 55.0% |
| !!! | CCCTTTTTTGGGACACGTGG+CGG | + | chr5.4:3372602-3372621 | MS.gene058149:intron | 55.0% |
| GCCGCCACGTGTCCCAAAAA+AGG | - | chr5.4:3372606-3372625 | None:intergenic | 60.0% | |
| ! | GGAAGCTGTGGTGATGAGGC+AGG | - | chr5.4:3371145-3371164 | None:intergenic | 60.0% |
| !! | GCGAAAACGGAAGCGGGTTG+TGG | - | chr5.4:3369168-3369187 | None:intergenic | 60.0% |
| !!! | GGCCCCTTTTTTGGGACACG+TGG | + | chr5.4:3372599-3372618 | MS.gene058149:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 3369111 | 3374545 | 3369111 | ID=MS.gene058149 |
| chr5.4 | mRNA | 3369111 | 3374545 | 3369111 | ID=MS.gene058149.t1;Parent=MS.gene058149 |
| chr5.4 | exon | 3369111 | 3369214 | 3369111 | ID=MS.gene058149.t1.exon1;Parent=MS.gene058149.t1 |
| chr5.4 | CDS | 3369111 | 3369214 | 3369111 | ID=cds.MS.gene058149.t1;Parent=MS.gene058149.t1 |
| chr5.4 | exon | 3369302 | 3369386 | 3369302 | ID=MS.gene058149.t1.exon2;Parent=MS.gene058149.t1 |
| chr5.4 | CDS | 3369302 | 3369386 | 3369302 | ID=cds.MS.gene058149.t1;Parent=MS.gene058149.t1 |
| chr5.4 | exon | 3369483 | 3369553 | 3369483 | ID=MS.gene058149.t1.exon3;Parent=MS.gene058149.t1 |
| chr5.4 | CDS | 3369483 | 3369553 | 3369483 | ID=cds.MS.gene058149.t1;Parent=MS.gene058149.t1 |
| chr5.4 | exon | 3370286 | 3370400 | 3370286 | ID=MS.gene058149.t1.exon4;Parent=MS.gene058149.t1 |
| chr5.4 | CDS | 3370286 | 3370400 | 3370286 | ID=cds.MS.gene058149.t1;Parent=MS.gene058149.t1 |
| chr5.4 | exon | 3370493 | 3370572 | 3370493 | ID=MS.gene058149.t1.exon5;Parent=MS.gene058149.t1 |
| chr5.4 | CDS | 3370493 | 3370572 | 3370493 | ID=cds.MS.gene058149.t1;Parent=MS.gene058149.t1 |
| chr5.4 | exon | 3371569 | 3371653 | 3371569 | ID=MS.gene058149.t1.exon6;Parent=MS.gene058149.t1 |
| chr5.4 | CDS | 3371569 | 3371653 | 3371569 | ID=cds.MS.gene058149.t1;Parent=MS.gene058149.t1 |
| chr5.4 | exon | 3371755 | 3371835 | 3371755 | ID=MS.gene058149.t1.exon7;Parent=MS.gene058149.t1 |
| chr5.4 | CDS | 3371755 | 3371835 | 3371755 | ID=cds.MS.gene058149.t1;Parent=MS.gene058149.t1 |
| chr5.4 | exon | 3372083 | 3372177 | 3372083 | ID=MS.gene058149.t1.exon8;Parent=MS.gene058149.t1 |
| chr5.4 | CDS | 3372083 | 3372177 | 3372083 | ID=cds.MS.gene058149.t1;Parent=MS.gene058149.t1 |
| chr5.4 | exon | 3372320 | 3372370 | 3372320 | ID=MS.gene058149.t1.exon9;Parent=MS.gene058149.t1 |
| chr5.4 | CDS | 3372320 | 3372370 | 3372320 | ID=cds.MS.gene058149.t1;Parent=MS.gene058149.t1 |
| chr5.4 | exon | 3373717 | 3373797 | 3373717 | ID=MS.gene058149.t1.exon10;Parent=MS.gene058149.t1 |
| chr5.4 | CDS | 3373717 | 3373797 | 3373717 | ID=cds.MS.gene058149.t1;Parent=MS.gene058149.t1 |
| chr5.4 | exon | 3374221 | 3374293 | 3374221 | ID=MS.gene058149.t1.exon11;Parent=MS.gene058149.t1 |
| chr5.4 | CDS | 3374221 | 3374293 | 3374221 | ID=cds.MS.gene058149.t1;Parent=MS.gene058149.t1 |
| chr5.4 | exon | 3374391 | 3374468 | 3374391 | ID=MS.gene058149.t1.exon12;Parent=MS.gene058149.t1 |
| chr5.4 | CDS | 3374391 | 3374468 | 3374391 | ID=cds.MS.gene058149.t1;Parent=MS.gene058149.t1 |
| chr5.4 | exon | 3374543 | 3374545 | 3374543 | ID=MS.gene058149.t1.exon13;Parent=MS.gene058149.t1 |
| chr5.4 | CDS | 3374543 | 3374545 | 3374543 | ID=cds.MS.gene058149.t1;Parent=MS.gene058149.t1 |
| Gene Sequence |
| Protein sequence |
