Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63015.t1 | KEH40533.1 | 92.8 | 305 | 21 | 1 | 14 | 318 | 49 | 352 | 1.40E-164 | 589 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63015.t1 | Q7Y1X1 | 65.8 | 301 | 101 | 2 | 18 | 317 | 82 | 381 | 2.4e-117 | 423.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63015.t1 | A0A072VGH1 | 92.8 | 305 | 21 | 1 | 14 | 318 | 49 | 352 | 9.8e-165 | 589.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050082 | MS.gene63015 | 0.805197 | 1.50E-49 | -1.69E-46 |
| MS.gene050338 | MS.gene63015 | 0.825576 | 4.35E-54 | -1.69E-46 |
| MS.gene050612 | MS.gene63015 | -0.803693 | 3.09E-49 | -1.69E-46 |
| MS.gene051651 | MS.gene63015 | 0.826011 | 3.43E-54 | -1.69E-46 |
| MS.gene05483 | MS.gene63015 | 0.804246 | 2.37E-49 | -1.69E-46 |
| MS.gene055251 | MS.gene63015 | 0.803442 | 3.48E-49 | -1.69E-46 |
| MS.gene055751 | MS.gene63015 | -0.80601 | 1.01E-49 | -1.69E-46 |
| MS.gene05589 | MS.gene63015 | -0.811754 | 5.98E-51 | -1.69E-46 |
| MS.gene056354 | MS.gene63015 | 0.804723 | 1.88E-49 | -1.69E-46 |
| MS.gene056856 | MS.gene63015 | 0.814549 | 1.46E-51 | -1.69E-46 |
| MS.gene058268 | MS.gene63015 | 0.809451 | 1.88E-50 | -1.69E-46 |
| MS.gene058334 | MS.gene63015 | 0.812416 | 4.29E-51 | -1.69E-46 |
| MS.gene059865 | MS.gene63015 | -0.802827 | 4.66E-49 | -1.69E-46 |
| MS.gene060823 | MS.gene63015 | 0.814997 | 1.16E-51 | -1.69E-46 |
| MS.gene060982 | MS.gene63015 | -0.806509 | 7.95E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63015.t1 | MTR_1g030265 | 92.787 | 305 | 21 | 1 | 14 | 318 | 49 | 352 | 0.0 | 583 |
| MS.gene63015.t1 | MTR_1g030230 | 86.379 | 301 | 40 | 1 | 18 | 318 | 80 | 379 | 0.0 | 539 |
| MS.gene63015.t1 | MTR_1g030268 | 85.235 | 298 | 41 | 2 | 18 | 315 | 88 | 382 | 0.0 | 514 |
| MS.gene63015.t1 | MTR_1g030275 | 81.395 | 301 | 53 | 2 | 18 | 318 | 87 | 384 | 1.54e-180 | 504 |
| MS.gene63015.t1 | MTR_1g030220 | 73.333 | 300 | 79 | 1 | 18 | 317 | 88 | 386 | 1.04e-166 | 469 |
| MS.gene63015.t1 | MTR_1g030340 | 65.894 | 302 | 99 | 3 | 18 | 317 | 90 | 389 | 3.26e-142 | 407 |
| MS.gene63015.t1 | MTR_1g030268 | 86.636 | 217 | 28 | 1 | 18 | 234 | 88 | 303 | 5.21e-132 | 379 |
| MS.gene63015.t1 | MTR_7g087190 | 57.096 | 303 | 127 | 2 | 18 | 317 | 91 | 393 | 1.38e-126 | 367 |
| MS.gene63015.t1 | MTR_8g089805 | 55.705 | 298 | 128 | 3 | 17 | 311 | 19 | 315 | 3.27e-121 | 351 |
| MS.gene63015.t1 | MTR_8g089805 | 56.229 | 297 | 126 | 3 | 18 | 311 | 88 | 383 | 2.02e-120 | 352 |
| MS.gene63015.t1 | MTR_7g033165 | 47.386 | 306 | 149 | 6 | 18 | 317 | 81 | 380 | 1.33e-90 | 275 |
| MS.gene63015.t1 | MTR_6g007090 | 43.648 | 307 | 149 | 7 | 18 | 315 | 87 | 378 | 2.90e-79 | 246 |
| MS.gene63015.t1 | MTR_7g113860 | 45.118 | 297 | 150 | 7 | 18 | 308 | 10 | 299 | 5.34e-77 | 238 |
| MS.gene63015.t1 | MTR_7g113860 | 45.118 | 297 | 150 | 7 | 19 | 309 | 79 | 368 | 5.84e-76 | 238 |
| MS.gene63015.t1 | MTR_7g113860 | 45.270 | 296 | 149 | 7 | 19 | 308 | 85 | 373 | 6.78e-76 | 238 |
| MS.gene63015.t1 | MTR_6g007100 | 39.404 | 302 | 159 | 6 | 19 | 316 | 81 | 362 | 6.04e-73 | 229 |
| MS.gene63015.t1 | MTR_8g038680 | 41.100 | 309 | 159 | 6 | 18 | 315 | 76 | 372 | 4.70e-72 | 227 |
| MS.gene63015.t1 | MTR_7g116870 | 38.944 | 303 | 172 | 6 | 18 | 315 | 81 | 375 | 1.48e-69 | 221 |
| MS.gene63015.t1 | MTR_6g007095 | 41.447 | 304 | 156 | 6 | 19 | 314 | 90 | 379 | 1.61e-69 | 229 |
| MS.gene63015.t1 | MTR_6g007095 | 38.889 | 306 | 152 | 6 | 19 | 316 | 419 | 697 | 7.10e-65 | 217 |
| MS.gene63015.t1 | MTR_1g082390 | 43.750 | 288 | 150 | 8 | 19 | 301 | 81 | 361 | 8.54e-69 | 219 |
| MS.gene63015.t1 | MTR_7g033155 | 37.383 | 321 | 170 | 7 | 18 | 315 | 86 | 398 | 2.26e-67 | 216 |
| MS.gene63015.t1 | MTR_7g033150 | 37.419 | 310 | 174 | 7 | 18 | 315 | 83 | 384 | 8.70e-66 | 212 |
| MS.gene63015.t1 | MTR_8g028160 | 38.312 | 308 | 171 | 6 | 18 | 315 | 84 | 382 | 8.89e-66 | 212 |
| MS.gene63015.t1 | MTR_7g033165 | 48.198 | 222 | 108 | 4 | 18 | 234 | 81 | 300 | 1.16e-64 | 206 |
| MS.gene63015.t1 | MTR_7g111780 | 38.206 | 301 | 164 | 7 | 18 | 316 | 85 | 365 | 4.75e-61 | 199 |
| MS.gene63015.t1 | MTR_7g111780 | 37.676 | 284 | 156 | 5 | 34 | 316 | 3 | 266 | 7.35e-59 | 190 |
| MS.gene63015.t1 | MTR_8g012540 | 38.909 | 275 | 143 | 7 | 18 | 280 | 76 | 337 | 1.04e-51 | 174 |
| MS.gene63015.t1 | MTR_2g015590 | 32.550 | 298 | 177 | 6 | 18 | 307 | 84 | 365 | 9.39e-39 | 140 |
| MS.gene63015.t1 | MTR_3g463930 | 31.803 | 305 | 183 | 10 | 18 | 309 | 95 | 387 | 2.23e-36 | 135 |
| MS.gene63015.t1 | MTR_3g463960 | 31.922 | 307 | 173 | 11 | 18 | 309 | 95 | 380 | 7.16e-36 | 133 |
| MS.gene63015.t1 | MTR_3g463950 | 31.922 | 307 | 173 | 11 | 18 | 309 | 95 | 380 | 7.16e-36 | 133 |
| MS.gene63015.t1 | MTR_3g463970 | 31.922 | 307 | 173 | 11 | 18 | 309 | 95 | 380 | 7.16e-36 | 133 |
| MS.gene63015.t1 | MTR_3g463940 | 31.922 | 307 | 173 | 11 | 18 | 309 | 95 | 380 | 7.16e-36 | 133 |
| MS.gene63015.t1 | MTR_2g015650 | 33.333 | 303 | 171 | 12 | 18 | 309 | 84 | 366 | 7.92e-36 | 133 |
| MS.gene63015.t1 | MTR_2g015580 | 32.667 | 300 | 173 | 9 | 18 | 307 | 100 | 380 | 4.94e-35 | 131 |
| MS.gene63015.t1 | MTR_2g015630 | 31.408 | 277 | 164 | 7 | 40 | 309 | 111 | 368 | 1.10e-33 | 127 |
| MS.gene63015.t1 | MTR_2g079090 | 29.801 | 302 | 172 | 10 | 18 | 309 | 80 | 351 | 1.40e-33 | 127 |
| MS.gene63015.t1 | MTR_2g015670 | 32.000 | 300 | 165 | 12 | 18 | 309 | 84 | 352 | 2.16e-33 | 126 |
| MS.gene63015.t1 | MTR_2g079080 | 29.470 | 302 | 173 | 10 | 18 | 309 | 80 | 351 | 5.90e-33 | 125 |
| MS.gene63015.t1 | MTR_0029s0100 | 29.801 | 302 | 172 | 10 | 18 | 309 | 80 | 351 | 5.51e-32 | 122 |
| MS.gene63015.t1 | MTR_3g438030 | 31.731 | 312 | 177 | 12 | 18 | 314 | 81 | 371 | 1.24e-31 | 122 |
| MS.gene63015.t1 | MTR_0029s0050 | 29.470 | 302 | 173 | 10 | 18 | 309 | 80 | 351 | 1.60e-31 | 121 |
| MS.gene63015.t1 | MTR_4g104240 | 30.233 | 301 | 175 | 11 | 19 | 309 | 94 | 369 | 4.32e-31 | 120 |
| MS.gene63015.t1 | MTR_3g069780 | 31.410 | 312 | 178 | 12 | 18 | 314 | 81 | 371 | 2.00e-30 | 118 |
| MS.gene63015.t1 | MTR_3g069520 | 31.847 | 314 | 175 | 13 | 18 | 314 | 78 | 369 | 2.22e-29 | 115 |
| MS.gene63015.t1 | MTR_2g043980 | 30.945 | 307 | 161 | 11 | 18 | 309 | 83 | 353 | 1.02e-28 | 114 |
| MS.gene63015.t1 | MTR_1g082410 | 30.612 | 294 | 114 | 11 | 23 | 314 | 104 | 309 | 5.16e-28 | 110 |
| MS.gene63015.t1 | MTR_3g448360 | 30.820 | 305 | 178 | 10 | 18 | 309 | 79 | 363 | 8.21e-28 | 111 |
| MS.gene63015.t1 | MTR_4g056160 | 29.861 | 288 | 174 | 8 | 20 | 304 | 86 | 348 | 1.22e-27 | 110 |
| MS.gene63015.t1 | MTR_4g056280 | 29.720 | 286 | 164 | 8 | 20 | 299 | 89 | 343 | 3.07e-27 | 109 |
| MS.gene63015.t1 | MTR_8g014910 | 28.975 | 283 | 171 | 8 | 20 | 299 | 91 | 346 | 3.39e-26 | 106 |
| MS.gene63015.t1 | MTR_2g100620 | 29.433 | 282 | 165 | 10 | 25 | 299 | 91 | 345 | 8.28e-26 | 105 |
| MS.gene63015.t1 | MTR_8g031430 | 27.719 | 285 | 181 | 7 | 18 | 302 | 90 | 349 | 9.83e-26 | 105 |
| MS.gene63015.t1 | MTR_8g079050 | 26.623 | 308 | 190 | 9 | 3 | 302 | 81 | 360 | 1.52e-25 | 105 |
| MS.gene63015.t1 | MTR_2g033930 | 31.982 | 222 | 127 | 8 | 90 | 306 | 149 | 351 | 1.02e-24 | 102 |
| MS.gene63015.t1 | MTR_8g031390 | 28.058 | 278 | 174 | 9 | 18 | 295 | 90 | 341 | 5.57e-24 | 100 |
| MS.gene63015.t1 | MTR_8g031420 | 28.058 | 278 | 175 | 8 | 18 | 295 | 88 | 340 | 7.14e-24 | 100 |
| MS.gene63015.t1 | MTR_1g025720 | 28.881 | 277 | 163 | 8 | 25 | 295 | 97 | 345 | 2.29e-23 | 99.0 |
| MS.gene63015.t1 | MTR_8g087890 | 26.263 | 297 | 179 | 7 | 24 | 312 | 92 | 356 | 1.29e-22 | 97.1 |
| MS.gene63015.t1 | MTR_1g025780 | 27.957 | 279 | 170 | 8 | 25 | 299 | 101 | 352 | 1.37e-22 | 97.1 |
| MS.gene63015.t1 | MTR_2g084585 | 27.106 | 273 | 170 | 6 | 30 | 299 | 97 | 343 | 1.68e-22 | 96.7 |
| MS.gene63015.t1 | MTR_3g114120 | 29.044 | 272 | 159 | 8 | 26 | 291 | 108 | 351 | 3.44e-22 | 95.9 |
| MS.gene63015.t1 | MTR_0565s0010 | 26.333 | 300 | 181 | 8 | 25 | 313 | 91 | 361 | 5.34e-22 | 95.1 |
| MS.gene63015.t1 | MTR_5g074270 | 27.852 | 298 | 178 | 12 | 24 | 315 | 96 | 362 | 7.93e-22 | 94.7 |
| MS.gene63015.t1 | MTR_8g031400 | 28.421 | 285 | 179 | 9 | 18 | 302 | 90 | 349 | 1.07e-21 | 94.4 |
| MS.gene63015.t1 | MTR_5g084750 | 27.437 | 277 | 164 | 9 | 26 | 294 | 91 | 338 | 2.01e-21 | 93.6 |
| MS.gene63015.t1 | MTR_3g082830 | 26.298 | 289 | 176 | 10 | 24 | 304 | 97 | 356 | 3.39e-21 | 92.8 |
| MS.gene63015.t1 | MTR_8g022810 | 27.304 | 293 | 171 | 10 | 18 | 299 | 94 | 355 | 4.22e-21 | 92.8 |
| MS.gene63015.t1 | MTR_1108s0010 | 30.088 | 226 | 133 | 6 | 81 | 303 | 3 | 206 | 7.09e-21 | 89.4 |
| MS.gene63015.t1 | MTR_7g116500 | 29.010 | 293 | 160 | 10 | 23 | 303 | 94 | 350 | 8.54e-21 | 92.0 |
| MS.gene63015.t1 | MTR_5g084770 | 28.315 | 279 | 162 | 11 | 26 | 295 | 89 | 338 | 9.06e-21 | 91.7 |
| MS.gene63015.t1 | MTR_3g114090 | 27.106 | 273 | 165 | 8 | 25 | 291 | 97 | 341 | 9.57e-21 | 91.7 |
| MS.gene63015.t1 | MTR_1g025700 | 26.978 | 278 | 163 | 10 | 25 | 293 | 110 | 356 | 1.03e-20 | 91.7 |
| MS.gene63015.t1 | MTR_1g025910 | 28.159 | 277 | 170 | 9 | 26 | 299 | 97 | 347 | 1.18e-20 | 91.7 |
| MS.gene63015.t1 | MTR_2g015590 | 29.368 | 269 | 169 | 7 | 18 | 276 | 84 | 341 | 1.75e-20 | 90.9 |
| MS.gene63015.t1 | MTR_1g025680 | 27.636 | 275 | 165 | 8 | 25 | 293 | 95 | 341 | 2.06e-20 | 91.7 |
| MS.gene63015.t1 | MTR_1g025760 | 26.148 | 283 | 168 | 10 | 19 | 293 | 138 | 387 | 2.85e-20 | 90.9 |
| MS.gene63015.t1 | MTR_5g074210 | 30.233 | 172 | 102 | 5 | 145 | 315 | 64 | 218 | 5.46e-20 | 87.0 |
| MS.gene63015.t1 | MTR_5g078210 | 27.007 | 274 | 157 | 10 | 40 | 304 | 102 | 341 | 7.54e-20 | 89.0 |
| MS.gene63015.t1 | MTR_5g022630 | 29.682 | 283 | 162 | 12 | 26 | 298 | 106 | 361 | 8.13e-20 | 89.4 |
| MS.gene63015.t1 | MTR_5g009100 | 26.159 | 302 | 189 | 11 | 18 | 312 | 98 | 372 | 9.35e-20 | 89.0 |
| MS.gene63015.t1 | MTR_5g084790 | 26.829 | 287 | 172 | 10 | 18 | 295 | 84 | 341 | 1.24e-19 | 88.6 |
| MS.gene63015.t1 | MTR_8g012520 | 37.008 | 127 | 48 | 3 | 105 | 231 | 7 | 101 | 1.28e-19 | 84.0 |
| MS.gene63015.t1 | MTR_4g122200 | 26.897 | 290 | 177 | 8 | 24 | 306 | 95 | 356 | 1.77e-19 | 88.2 |
| MS.gene63015.t1 | MTR_1g069175 | 29.431 | 299 | 169 | 12 | 23 | 312 | 95 | 360 | 1.83e-19 | 88.2 |
| MS.gene63015.t1 | MTR_7g008060 | 26.552 | 290 | 171 | 9 | 23 | 303 | 81 | 337 | 2.04e-19 | 87.8 |
| MS.gene63015.t1 | MTR_3g464730 | 26.736 | 288 | 172 | 11 | 18 | 295 | 80 | 338 | 3.38e-19 | 87.0 |
| MS.gene63015.t1 | MTR_7g116520 | 27.907 | 301 | 170 | 10 | 23 | 312 | 95 | 359 | 3.68e-19 | 87.4 |
| MS.gene63015.t1 | MTR_5g093090 | 28.522 | 291 | 167 | 12 | 24 | 305 | 91 | 349 | 4.38e-19 | 87.0 |
| MS.gene63015.t1 | MTR_4g019880 | 27.148 | 291 | 168 | 10 | 23 | 302 | 93 | 350 | 4.65e-19 | 87.0 |
| MS.gene63015.t1 | MTR_3g052480 | 28.223 | 287 | 168 | 10 | 24 | 302 | 96 | 352 | 5.88e-19 | 86.7 |
| MS.gene63015.t1 | MTR_2g033920 | 27.586 | 290 | 175 | 9 | 24 | 306 | 95 | 356 | 7.20e-19 | 86.7 |
| MS.gene63015.t1 | MTR_2g044100 | 26.804 | 291 | 187 | 10 | 18 | 305 | 97 | 364 | 1.05e-18 | 86.3 |
| MS.gene63015.t1 | MTR_3g052490 | 29.153 | 295 | 166 | 14 | 24 | 307 | 95 | 357 | 1.34e-18 | 85.5 |
| MS.gene63015.t1 | MTR_7g116510 | 25.773 | 291 | 173 | 9 | 23 | 303 | 86 | 343 | 1.53e-18 | 85.5 |
| MS.gene63015.t1 | MTR_6g021530 | 25.676 | 296 | 176 | 10 | 23 | 307 | 91 | 353 | 2.19e-18 | 85.1 |
| MS.gene63015.t1 | MTR_7g116570 | 25.606 | 289 | 175 | 8 | 23 | 303 | 95 | 351 | 2.69e-18 | 84.7 |
| MS.gene63015.t1 | MTR_3g024510 | 27.046 | 281 | 164 | 9 | 25 | 295 | 97 | 346 | 2.96e-18 | 84.7 |
| MS.gene63015.t1 | MTR_3g435540 | 25.352 | 284 | 177 | 9 | 23 | 299 | 81 | 336 | 3.96e-18 | 84.3 |
| MS.gene63015.t1 | MTR_0127s0040 | 26.818 | 220 | 137 | 5 | 100 | 313 | 33 | 234 | 4.89e-18 | 82.0 |
| MS.gene63015.t1 | MTR_3g052580 | 28.231 | 294 | 169 | 13 | 24 | 307 | 90 | 351 | 6.20e-18 | 84.0 |
| MS.gene63015.t1 | MTR_3g052580 | 28.231 | 294 | 169 | 13 | 24 | 307 | 91 | 352 | 6.35e-18 | 84.0 |
| MS.gene63015.t1 | MTR_3g098270 | 25.249 | 301 | 182 | 9 | 18 | 308 | 88 | 355 | 1.25e-17 | 83.2 |
| MS.gene63015.t1 | MTR_5g022640 | 26.481 | 287 | 178 | 9 | 24 | 306 | 107 | 364 | 1.35e-17 | 82.8 |
| MS.gene63015.t1 | MTR_8g075220 | 26.502 | 283 | 174 | 10 | 24 | 299 | 103 | 358 | 2.15e-17 | 82.0 |
| MS.gene63015.t1 | MTR_8g031390 | 26.482 | 253 | 164 | 8 | 18 | 270 | 90 | 320 | 2.96e-17 | 81.3 |
| MS.gene63015.t1 | MTR_3g005660 | 25.632 | 277 | 184 | 9 | 34 | 307 | 104 | 361 | 1.16e-16 | 80.1 |
| MS.gene63015.t1 | MTR_8g022790 | 27.138 | 269 | 161 | 8 | 37 | 302 | 109 | 345 | 2.38e-16 | 79.0 |
| MS.gene63015.t1 | MTR_2g015080 | 26.389 | 288 | 165 | 11 | 26 | 296 | 100 | 357 | 3.36e-16 | 79.0 |
| MS.gene63015.t1 | MTR_1g024890 | 26.280 | 293 | 168 | 10 | 23 | 303 | 93 | 349 | 1.35e-15 | 77.0 |
| MS.gene63015.t1 | MTR_5g083040 | 29.048 | 210 | 126 | 7 | 100 | 302 | 157 | 350 | 1.99e-15 | 76.3 |
| MS.gene63015.t1 | MTR_3g005650 | 25.166 | 302 | 187 | 10 | 18 | 312 | 81 | 350 | 3.24e-15 | 75.9 |
| MS.gene63015.t1 | MTR_1g079540 | 27.055 | 292 | 167 | 12 | 23 | 303 | 92 | 348 | 4.04e-15 | 75.5 |
| MS.gene63015.t1 | MTR_8g075200 | 24.739 | 287 | 169 | 11 | 24 | 299 | 104 | 354 | 8.50e-15 | 74.7 |
| MS.gene63015.t1 | MTR_5g087690 | 25.714 | 280 | 167 | 10 | 40 | 310 | 117 | 364 | 3.40e-14 | 72.8 |
| MS.gene63015.t1 | MTR_0009s0250 | 28.194 | 227 | 138 | 6 | 23 | 245 | 90 | 295 | 3.95e-14 | 72.4 |
| MS.gene63015.t1 | MTR_2g461580 | 24.545 | 220 | 135 | 3 | 101 | 316 | 157 | 349 | 6.18e-14 | 72.0 |
| MS.gene63015.t1 | MTR_8g075230 | 25.714 | 280 | 169 | 10 | 25 | 295 | 96 | 345 | 1.10e-13 | 71.2 |
| MS.gene63015.t1 | MTR_5g078210 | 30.935 | 139 | 85 | 3 | 101 | 234 | 152 | 284 | 4.41e-13 | 69.3 |
| MS.gene63015.t1 | MTR_2g043990 | 29.694 | 229 | 112 | 10 | 18 | 233 | 145 | 337 | 5.13e-13 | 69.3 |
| MS.gene63015.t1 | MTR_8g074560 | 23.103 | 290 | 167 | 11 | 29 | 302 | 103 | 352 | 5.13e-13 | 69.3 |
| MS.gene63015.t1 | MTR_6g049230 | 35.644 | 101 | 62 | 1 | 146 | 246 | 73 | 170 | 8.61e-13 | 66.6 |
| MS.gene63015.t1 | MTR_4g108690 | 22.472 | 267 | 175 | 8 | 37 | 299 | 102 | 340 | 1.30e-12 | 68.2 |
| MS.gene63015.t1 | MTR_2g058390 | 44.444 | 63 | 35 | 0 | 102 | 164 | 7 | 69 | 2.86e-12 | 61.6 |
| MS.gene63015.t1 | MTR_2g017965 | 25.185 | 270 | 159 | 13 | 34 | 295 | 102 | 336 | 8.17e-12 | 65.9 |
| MS.gene63015.t1 | MTR_2g033920 | 27.523 | 218 | 134 | 7 | 24 | 234 | 95 | 295 | 1.80e-11 | 64.3 |
| MS.gene63015.t1 | MTR_4g036385 | 29.060 | 117 | 72 | 2 | 183 | 299 | 22 | 127 | 8.57e-11 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63015.t1 | AT3G26430 | 52.475 | 303 | 140 | 3 | 18 | 317 | 79 | 380 | 3.01e-113 | 333 |
| MS.gene63015.t1 | AT1G67830 | 52.303 | 304 | 133 | 4 | 18 | 318 | 78 | 372 | 1.07e-112 | 331 |
| MS.gene63015.t1 | AT5G14450 | 46.965 | 313 | 142 | 6 | 18 | 318 | 89 | 389 | 1.71e-94 | 285 |
| MS.gene63015.t1 | AT3G27950 | 45.425 | 306 | 142 | 8 | 19 | 315 | 81 | 370 | 2.50e-77 | 241 |
| MS.gene63015.t1 | AT1G54790 | 44.330 | 291 | 151 | 8 | 23 | 308 | 85 | 369 | 3.92e-73 | 230 |
| MS.gene63015.t1 | AT1G54790 | 44.330 | 291 | 151 | 8 | 23 | 308 | 86 | 370 | 8.11e-73 | 229 |
| MS.gene63015.t1 | AT1G54790 | 40.694 | 317 | 151 | 9 | 23 | 308 | 85 | 395 | 2.30e-67 | 216 |
| MS.gene63015.t1 | AT3G05180 | 40.956 | 293 | 163 | 5 | 24 | 312 | 92 | 378 | 1.28e-65 | 211 |
| MS.gene63015.t1 | AT1G56670 | 39.535 | 301 | 163 | 7 | 19 | 317 | 90 | 373 | 3.64e-64 | 207 |
| MS.gene63015.t1 | AT4G01130 | 38.158 | 304 | 177 | 7 | 18 | 315 | 82 | 380 | 2.08e-63 | 205 |
| MS.gene63015.t1 | AT4G01130 | 38.127 | 299 | 174 | 7 | 23 | 315 | 1 | 294 | 2.71e-63 | 202 |
| MS.gene63015.t1 | AT1G09390 | 38.796 | 299 | 164 | 6 | 19 | 315 | 87 | 368 | 1.04e-61 | 201 |
| MS.gene63015.t1 | AT3G62280 | 36.842 | 304 | 161 | 9 | 17 | 313 | 84 | 363 | 1.59e-52 | 177 |
| MS.gene63015.t1 | AT1G28600 | 34.091 | 308 | 175 | 8 | 18 | 317 | 85 | 372 | 8.55e-45 | 157 |
| MS.gene63015.t1 | AT4G01130 | 37.838 | 222 | 128 | 6 | 18 | 234 | 82 | 298 | 1.61e-42 | 150 |
| MS.gene63015.t1 | AT1G56670 | 38.249 | 217 | 124 | 4 | 19 | 234 | 90 | 297 | 1.46e-40 | 144 |
| MS.gene63015.t1 | AT1G28580 | 31.000 | 300 | 180 | 7 | 18 | 308 | 10 | 291 | 8.18e-40 | 142 |
| MS.gene63015.t1 | AT1G28650 | 33.444 | 302 | 168 | 8 | 18 | 307 | 91 | 371 | 1.24e-39 | 143 |
| MS.gene63015.t1 | AT1G28640 | 31.788 | 302 | 173 | 7 | 18 | 307 | 89 | 369 | 2.17e-39 | 143 |
| MS.gene63015.t1 | AT1G28610 | 32.441 | 299 | 174 | 8 | 18 | 307 | 85 | 364 | 2.54e-39 | 142 |
| MS.gene63015.t1 | AT1G28580 | 31.000 | 300 | 180 | 7 | 18 | 308 | 91 | 372 | 4.83e-39 | 142 |
| MS.gene63015.t1 | AT1G31550 | 32.558 | 301 | 173 | 8 | 18 | 308 | 90 | 370 | 1.70e-38 | 140 |
| MS.gene63015.t1 | AT1G28670 | 33.557 | 298 | 174 | 8 | 18 | 307 | 89 | 370 | 1.96e-37 | 137 |
| MS.gene63015.t1 | AT1G28590 | 31.667 | 300 | 178 | 7 | 18 | 308 | 90 | 371 | 2.29e-36 | 135 |
| MS.gene63015.t1 | AT1G31550 | 31.333 | 300 | 175 | 8 | 18 | 308 | 90 | 367 | 3.68e-35 | 131 |
| MS.gene63015.t1 | AT2G27360 | 31.169 | 308 | 182 | 9 | 18 | 315 | 87 | 374 | 4.97e-34 | 129 |
| MS.gene63015.t1 | AT1G28660 | 30.592 | 304 | 173 | 9 | 18 | 307 | 89 | 368 | 2.00e-33 | 127 |
| MS.gene63015.t1 | AT1G28660 | 31.148 | 305 | 171 | 10 | 18 | 307 | 89 | 369 | 8.85e-33 | 125 |
| MS.gene63015.t1 | AT1G28570 | 28.808 | 302 | 184 | 8 | 18 | 308 | 88 | 369 | 1.80e-32 | 124 |
| MS.gene63015.t1 | AT5G45910 | 31.250 | 304 | 178 | 10 | 18 | 307 | 83 | 369 | 6.91e-32 | 122 |
| MS.gene63015.t1 | AT3G62280 | 35.111 | 225 | 130 | 6 | 17 | 238 | 84 | 295 | 1.23e-31 | 120 |
| MS.gene63015.t1 | AT2G23540 | 28.526 | 312 | 179 | 11 | 3 | 302 | 92 | 371 | 4.83e-29 | 115 |
| MS.gene63015.t1 | AT1G28570 | 30.882 | 204 | 128 | 3 | 110 | 308 | 11 | 206 | 1.12e-28 | 110 |
| MS.gene63015.t1 | AT3G48460 | 27.152 | 302 | 183 | 8 | 18 | 307 | 92 | 368 | 1.35e-28 | 114 |
| MS.gene63015.t1 | AT1G28570 | 27.843 | 255 | 149 | 4 | 59 | 308 | 73 | 297 | 1.62e-28 | 112 |
| MS.gene63015.t1 | AT5G03980 | 30.688 | 189 | 119 | 3 | 110 | 295 | 127 | 306 | 4.88e-25 | 103 |
| MS.gene63015.t1 | AT3G16370 | 30.072 | 276 | 163 | 9 | 25 | 295 | 90 | 340 | 3.22e-23 | 98.6 |
| MS.gene63015.t1 | AT5G22810 | 28.873 | 284 | 166 | 9 | 25 | 299 | 94 | 350 | 7.38e-23 | 97.8 |
| MS.gene63015.t1 | AT5G03820 | 27.018 | 285 | 175 | 9 | 20 | 299 | 92 | 348 | 1.04e-22 | 97.4 |
| MS.gene63015.t1 | AT3G50400 | 26.433 | 314 | 184 | 12 | 3 | 302 | 78 | 358 | 1.15e-22 | 97.4 |
| MS.gene63015.t1 | AT5G03820 | 27.018 | 285 | 175 | 9 | 20 | 299 | 120 | 376 | 2.03e-22 | 96.7 |
| MS.gene63015.t1 | AT5G03810 | 25.347 | 288 | 175 | 9 | 20 | 299 | 89 | 344 | 3.13e-22 | 95.9 |
| MS.gene63015.t1 | AT1G29670 | 26.087 | 276 | 173 | 7 | 25 | 295 | 90 | 339 | 6.67e-22 | 95.1 |
| MS.gene63015.t1 | AT5G15720 | 24.919 | 309 | 195 | 8 | 1 | 295 | 25 | 310 | 7.96e-22 | 94.4 |
| MS.gene63015.t1 | AT4G18970 | 25.362 | 276 | 176 | 6 | 25 | 295 | 87 | 337 | 8.86e-22 | 94.7 |
| MS.gene63015.t1 | AT1G75900 | 27.737 | 274 | 164 | 10 | 28 | 295 | 106 | 351 | 1.25e-21 | 94.4 |
| MS.gene63015.t1 | AT2G42990 | 27.915 | 283 | 167 | 11 | 24 | 298 | 87 | 340 | 1.43e-21 | 94.0 |
| MS.gene63015.t1 | AT4G18970 | 25.362 | 276 | 176 | 6 | 25 | 295 | 87 | 337 | 1.65e-21 | 94.4 |
| MS.gene63015.t1 | AT1G29670 | 26.087 | 276 | 173 | 7 | 25 | 295 | 158 | 407 | 1.69e-21 | 94.7 |
| MS.gene63015.t1 | AT5G15720 | 25.993 | 277 | 175 | 7 | 24 | 295 | 90 | 341 | 3.32e-21 | 93.2 |
| MS.gene63015.t1 | AT1G59406 | 26.909 | 275 | 173 | 9 | 25 | 299 | 94 | 340 | 8.01e-21 | 91.7 |
| MS.gene63015.t1 | AT1G59030 | 26.909 | 275 | 173 | 9 | 25 | 299 | 94 | 340 | 8.01e-21 | 91.7 |
| MS.gene63015.t1 | AT1G58725 | 26.909 | 275 | 173 | 9 | 25 | 299 | 94 | 340 | 8.01e-21 | 91.7 |
| MS.gene63015.t1 | AT2G04570 | 25.874 | 286 | 181 | 10 | 24 | 304 | 87 | 346 | 8.76e-21 | 91.7 |
| MS.gene63015.t1 | AT5G45950 | 26.761 | 284 | 170 | 11 | 18 | 295 | 92 | 343 | 9.45e-21 | 91.7 |
| MS.gene63015.t1 | AT4G10950 | 25.497 | 302 | 191 | 9 | 18 | 312 | 123 | 397 | 2.06e-20 | 91.3 |
| MS.gene63015.t1 | AT1G75880 | 28.195 | 266 | 156 | 9 | 40 | 299 | 129 | 365 | 2.19e-20 | 90.9 |
| MS.gene63015.t1 | AT1G75880 | 28.195 | 266 | 157 | 8 | 40 | 299 | 129 | 366 | 2.28e-20 | 90.9 |
| MS.gene63015.t1 | AT5G40990 | 27.675 | 271 | 171 | 7 | 35 | 302 | 109 | 357 | 2.72e-20 | 90.5 |
| MS.gene63015.t1 | AT4G10950 | 25.589 | 297 | 187 | 9 | 23 | 312 | 124 | 393 | 4.04e-20 | 90.5 |
| MS.gene63015.t1 | AT4G26790 | 28.014 | 282 | 162 | 12 | 28 | 299 | 92 | 342 | 4.79e-20 | 89.7 |
| MS.gene63015.t1 | AT4G26790 | 28.014 | 282 | 162 | 12 | 28 | 299 | 92 | 342 | 4.79e-20 | 89.7 |
| MS.gene63015.t1 | AT5G42170 | 26.966 | 267 | 165 | 9 | 35 | 299 | 122 | 360 | 8.59e-20 | 89.4 |
| MS.gene63015.t1 | AT5G45670 | 26.087 | 276 | 174 | 7 | 25 | 295 | 88 | 338 | 1.04e-19 | 89.0 |
| MS.gene63015.t1 | AT1G20130 | 28.315 | 279 | 164 | 10 | 28 | 295 | 267 | 520 | 2.81e-19 | 88.6 |
| MS.gene63015.t1 | AT1G20130 | 28.723 | 282 | 159 | 11 | 28 | 295 | 247 | 500 | 3.10e-19 | 88.6 |
| MS.gene63015.t1 | AT3G04290 | 28.475 | 295 | 159 | 11 | 23 | 303 | 90 | 346 | 4.48e-19 | 87.0 |
| MS.gene63015.t1 | AT1G20120 | 27.740 | 292 | 175 | 12 | 24 | 306 | 137 | 401 | 4.81e-19 | 87.4 |
| MS.gene63015.t1 | AT4G28780 | 26.644 | 289 | 172 | 8 | 23 | 303 | 92 | 348 | 5.23e-19 | 87.0 |
| MS.gene63015.t1 | AT1G53940 | 28.772 | 285 | 176 | 9 | 23 | 302 | 97 | 359 | 6.45e-19 | 86.7 |
| MS.gene63015.t1 | AT1G53990 | 27.881 | 269 | 169 | 7 | 37 | 302 | 102 | 348 | 2.97e-18 | 84.7 |
| MS.gene63015.t1 | AT1G54030 | 27.925 | 265 | 138 | 7 | 35 | 292 | 119 | 337 | 6.68e-18 | 84.0 |
| MS.gene63015.t1 | AT1G58520 | 26.182 | 275 | 168 | 10 | 25 | 299 | 94 | 333 | 6.73e-18 | 83.6 |
| MS.gene63015.t1 | AT1G58525 | 26.182 | 275 | 168 | 10 | 25 | 299 | 94 | 333 | 6.73e-18 | 83.6 |
| MS.gene63015.t1 | AT5G63170 | 27.338 | 278 | 149 | 11 | 20 | 291 | 91 | 321 | 7.00e-18 | 83.2 |
| MS.gene63015.t1 | AT5G37690 | 26.056 | 284 | 167 | 10 | 24 | 299 | 90 | 338 | 7.84e-18 | 83.6 |
| MS.gene63015.t1 | AT5G37690 | 26.056 | 284 | 167 | 10 | 24 | 299 | 82 | 330 | 8.62e-18 | 83.2 |
| MS.gene63015.t1 | AT1G29660 | 24.911 | 281 | 171 | 8 | 25 | 295 | 90 | 340 | 9.48e-18 | 83.2 |
| MS.gene63015.t1 | AT3G53100 | 26.667 | 270 | 165 | 9 | 35 | 299 | 101 | 342 | 1.01e-17 | 83.2 |
| MS.gene63015.t1 | AT1G20132 | 30.846 | 201 | 112 | 8 | 103 | 295 | 189 | 370 | 1.13e-17 | 83.2 |
| MS.gene63015.t1 | AT1G75890 | 25.564 | 266 | 165 | 9 | 35 | 295 | 120 | 357 | 1.56e-17 | 82.8 |
| MS.gene63015.t1 | AT1G75890 | 25.564 | 266 | 165 | 9 | 35 | 295 | 149 | 386 | 1.64e-17 | 82.8 |
| MS.gene63015.t1 | AT5G08460 | 25.743 | 303 | 186 | 10 | 23 | 313 | 106 | 381 | 2.13e-17 | 82.4 |
| MS.gene63015.t1 | AT1G06990 | 24.275 | 276 | 177 | 9 | 24 | 295 | 100 | 347 | 3.45e-17 | 81.6 |
| MS.gene63015.t1 | AT5G33370 | 26.230 | 305 | 170 | 12 | 15 | 303 | 82 | 347 | 4.72e-17 | 81.3 |
| MS.gene63015.t1 | AT5G18430 | 25.000 | 288 | 177 | 8 | 23 | 302 | 90 | 346 | 1.17e-16 | 80.1 |
| MS.gene63015.t1 | AT3G14225 | 28.676 | 272 | 167 | 8 | 35 | 302 | 109 | 357 | 1.18e-16 | 80.1 |
| MS.gene63015.t1 | AT1G75890 | 26.496 | 234 | 144 | 7 | 67 | 295 | 160 | 370 | 1.36e-16 | 80.1 |
| MS.gene63015.t1 | AT2G19050 | 26.715 | 277 | 153 | 11 | 40 | 307 | 105 | 340 | 1.37e-16 | 79.7 |
| MS.gene63015.t1 | AT1G71691 | 25.177 | 282 | 180 | 8 | 18 | 295 | 106 | 360 | 1.69e-16 | 79.7 |
| MS.gene63015.t1 | AT2G30310 | 26.022 | 269 | 162 | 9 | 33 | 291 | 100 | 341 | 2.39e-16 | 79.3 |
| MS.gene63015.t1 | AT1G71691 | 25.267 | 281 | 179 | 9 | 19 | 295 | 6 | 259 | 2.60e-16 | 78.2 |
| MS.gene63015.t1 | AT3G14225 | 30.392 | 204 | 128 | 5 | 103 | 302 | 168 | 361 | 2.71e-16 | 79.3 |
| MS.gene63015.t1 | AT2G30220 | 25.000 | 296 | 188 | 10 | 3 | 293 | 76 | 342 | 3.06e-16 | 79.0 |
| MS.gene63015.t1 | AT2G31550 | 28.000 | 175 | 106 | 6 | 135 | 304 | 58 | 217 | 4.21e-16 | 76.3 |
| MS.gene63015.t1 | AT5G45960 | 26.222 | 225 | 147 | 9 | 29 | 246 | 111 | 323 | 7.23e-16 | 77.8 |
| MS.gene63015.t1 | AT1G58430 | 26.702 | 191 | 120 | 5 | 105 | 290 | 166 | 341 | 7.59e-16 | 77.8 |
| MS.gene63015.t1 | AT1G33811 | 23.929 | 280 | 180 | 7 | 25 | 295 | 93 | 348 | 7.64e-16 | 77.8 |
| MS.gene63015.t1 | AT1G73610 | 25.795 | 283 | 162 | 8 | 20 | 299 | 98 | 335 | 2.10e-15 | 76.3 |
| MS.gene63015.t1 | AT2G31540 | 28.000 | 175 | 106 | 6 | 135 | 304 | 199 | 358 | 2.13e-15 | 76.3 |
| MS.gene63015.t1 | AT2G24560 | 29.747 | 158 | 94 | 5 | 135 | 290 | 198 | 340 | 2.24e-15 | 76.3 |
| MS.gene63015.t1 | AT1G53920 | 23.413 | 252 | 169 | 6 | 39 | 289 | 123 | 351 | 3.41e-15 | 75.9 |
| MS.gene63015.t1 | AT5G55050 | 30.144 | 209 | 118 | 8 | 101 | 301 | 171 | 359 | 4.08e-15 | 75.9 |
| MS.gene63015.t1 | AT3G14820 | 23.897 | 272 | 178 | 7 | 24 | 295 | 95 | 337 | 5.54e-15 | 75.1 |
| MS.gene63015.t1 | AT1G23500 | 28.390 | 236 | 131 | 8 | 71 | 302 | 138 | 339 | 6.42e-15 | 74.7 |
| MS.gene63015.t1 | AT2G19060 | 25.574 | 305 | 168 | 13 | 18 | 307 | 81 | 341 | 9.73e-15 | 74.3 |
| MS.gene63015.t1 | AT1G54020 | 24.823 | 282 | 170 | 8 | 34 | 312 | 14 | 256 | 2.25e-14 | 72.8 |
| MS.gene63015.t1 | AT1G54020 | 24.823 | 282 | 170 | 8 | 34 | 312 | 14 | 256 | 2.25e-14 | 72.8 |
| MS.gene63015.t1 | AT1G54020 | 24.823 | 282 | 170 | 8 | 34 | 312 | 14 | 256 | 2.25e-14 | 72.8 |
| MS.gene63015.t1 | AT1G71120 | 24.055 | 291 | 168 | 8 | 24 | 302 | 93 | 342 | 5.34e-14 | 72.4 |
| MS.gene63015.t1 | AT1G54020 | 24.823 | 282 | 170 | 8 | 34 | 312 | 100 | 342 | 6.23e-14 | 72.0 |
| MS.gene63015.t1 | AT1G74460 | 26.148 | 283 | 168 | 11 | 23 | 295 | 81 | 332 | 8.31e-14 | 71.6 |
| MS.gene63015.t1 | AT5G15720 | 25.000 | 216 | 144 | 5 | 24 | 234 | 90 | 292 | 9.36e-14 | 71.2 |
| MS.gene63015.t1 | AT1G54020 | 27.273 | 220 | 137 | 8 | 98 | 312 | 6 | 207 | 1.18e-13 | 69.7 |
| MS.gene63015.t1 | AT5G41890 | 26.977 | 215 | 133 | 7 | 99 | 302 | 158 | 359 | 1.84e-13 | 70.9 |
| MS.gene63015.t1 | AT1G71250 | 24.823 | 282 | 173 | 10 | 34 | 308 | 110 | 359 | 2.25e-13 | 70.5 |
| MS.gene63015.t1 | AT4G16233 | 31.746 | 126 | 75 | 1 | 181 | 306 | 4 | 118 | 4.11e-13 | 65.9 |
| MS.gene63015.t1 | AT2G40250 | 33.645 | 107 | 66 | 2 | 144 | 246 | 207 | 312 | 1.49e-12 | 68.2 |
| MS.gene63015.t1 | AT1G54010 | 26.577 | 222 | 138 | 8 | 99 | 312 | 146 | 350 | 2.28e-12 | 67.4 |
| MS.gene63015.t1 | AT3G43550 | 25.714 | 210 | 139 | 6 | 25 | 234 | 94 | 286 | 2.83e-12 | 66.6 |
| MS.gene63015.t1 | AT2G19050 | 27.128 | 188 | 109 | 6 | 40 | 221 | 105 | 270 | 8.25e-12 | 65.1 |
| MS.gene63015.t1 | AT1G20135 | 24.286 | 280 | 165 | 9 | 20 | 296 | 92 | 327 | 1.01e-11 | 65.5 |
| MS.gene63015.t1 | AT4G30140 | 28.095 | 210 | 122 | 7 | 104 | 307 | 154 | 340 | 5.14e-11 | 63.2 |
| MS.gene63015.t1 | AT2G24560 | 31.731 | 104 | 66 | 3 | 135 | 236 | 198 | 298 | 8.23e-11 | 62.4 |
Find 71 sgRNAs with CRISPR-Local
Find 104 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTTGTACCATTTATGTTTA+TGG | 0.138517 | 1.2:-15878441 | None:intergenic |
| TGGATGTGTACCTTTAATTT+TGG | 0.167825 | 1.2:+15877973 | MS.gene63015:CDS |
| TATAAAATTCTTTACTATAT+CGG | 0.215235 | 1.2:-15877715 | None:intergenic |
| ACCAATATCAAATGTGTATA+AGG | 0.220968 | 1.2:-15877628 | None:intergenic |
| AACCATCTACTAGAATAATA+TGG | 0.227325 | 1.2:+15878486 | MS.gene63015:CDS |
| ATTTAGGGGCAAGGTCATTT+TGG | 0.232450 | 1.2:+15877930 | MS.gene63015:CDS |
| TTTGGAATAATAATCTTCTT+TGG | 0.255011 | 1.2:-15877604 | None:intergenic |
| ATCTAGAACATATACAATTT+AGG | 0.266079 | 1.2:+15877914 | MS.gene63015:intron |
| TACTGAACCTGAAGGGAAAA+TGG | 0.271054 | 1.2:-15877384 | None:intergenic |
| GGAAAATTGGCCAAAATTAA+AGG | 0.278464 | 1.2:-15877983 | None:intergenic |
| CTTTATAGCAGATGGAAAAT+TGG | 0.280511 | 1.2:-15877996 | None:intergenic |
| TTGGAATAATAATCTTCTTT+GGG | 0.286703 | 1.2:-15877603 | None:intergenic |
| ATCCTCCTATTCCACTAAAT+AGG | 0.287174 | 1.2:+15878579 | MS.gene63015:CDS |
| TCCCATATTATTCTAGTAGA+TGG | 0.294746 | 1.2:-15878488 | None:intergenic |
| TACCTAAAACAAGGTTCATT+AGG | 0.300155 | 1.2:+15877427 | MS.gene63015:CDS |
| GATGTAGATGGGTTTGTTAT+TGG | 0.308914 | 1.2:-15877127 | None:intergenic |
| GCCTTATACACATTTGATAT+TGG | 0.309552 | 1.2:+15877627 | MS.gene63015:CDS |
| CCTATATAGTGTGATGTAGA+TGG | 0.325887 | 1.2:-15877139 | None:intergenic |
| AGTGCATATCTTGATTCTCT+TGG | 0.329038 | 1.2:+15877270 | MS.gene63015:CDS |
| TCTAGAACATATACAATTTA+GGG | 0.329938 | 1.2:+15877915 | MS.gene63015:intron |
| CTGTAACATGCCCTATTTAG+TGG | 0.330204 | 1.2:-15878590 | None:intergenic |
| GGAGCAACCATAAACATAAA+TGG | 0.333844 | 1.2:+15878434 | MS.gene63015:CDS |
| GTCTTTGATCAAATCTCTAC+TGG | 0.362400 | 1.2:+15878545 | MS.gene63015:CDS |
| ATCAAGATATGCACTTAGAT+AGG | 0.372608 | 1.2:-15877262 | None:intergenic |
| ATCAAATGTGTATAAGGCTT+TGG | 0.373582 | 1.2:-15877622 | None:intergenic |
| ATAAAATTCTTTACTATATC+GGG | 0.374442 | 1.2:-15877714 | None:intergenic |
| TCCTCCTATTCCACTAAATA+GGG | 0.379818 | 1.2:+15878580 | MS.gene63015:CDS |
| CATGCCCTATTTAGTGGAAT+AGG | 0.385420 | 1.2:-15878584 | None:intergenic |
| ACCTAAAACAAGGTTCATTA+GGG | 0.406556 | 1.2:+15877428 | MS.gene63015:CDS |
| ATACATAACACTGGACCAAT+TGG | 0.419424 | 1.2:+15877953 | MS.gene63015:CDS |
| ATATTTCAATTTAAAGTTGA+AGG | 0.433727 | 1.2:+15878060 | MS.gene63015:CDS |
| GTGCATATCTTGATTCTCTT+GGG | 0.440070 | 1.2:+15877271 | MS.gene63015:CDS |
| ACCATCTACTAGAATAATAT+GGG | 0.442115 | 1.2:+15878487 | MS.gene63015:CDS |
| CCATCTACATCACACTATAT+AGG | 0.446253 | 1.2:+15877139 | MS.gene63015:CDS |
| GGTCAAAATGATCTTACTGC+TGG | 0.466959 | 1.2:+15877648 | MS.gene63015:CDS |
| ACAAGGTTCATTAGGGATCA+AGG | 0.468253 | 1.2:+15877435 | MS.gene63015:CDS |
| ATTAAAGGTACACATCCAAT+TGG | 0.476146 | 1.2:-15877968 | None:intergenic |
| AAGCCCTAGCTCATCTTCGC+AGG | 0.481072 | 1.2:+15878083 | MS.gene63015:CDS |
| AATGGTACAAACACTGTTGT+GGG | 0.499739 | 1.2:+15878452 | MS.gene63015:CDS |
| TACAACTATAACATTAGTGC+TGG | 0.500660 | 1.2:+15878407 | MS.gene63015:CDS |
| CTAGGTATGATATTACTAGT+AGG | 0.500699 | 1.2:-15877348 | None:intergenic |
| GGTGCAAACTTTGCAACAGC+AGG | 0.502492 | 1.2:+15877309 | MS.gene63015:CDS |
| TAACTATCCTTTATAGCAGA+TGG | 0.504462 | 1.2:-15878004 | None:intergenic |
| CTAGTGGCTTGTTGTGGCAA+TGG | 0.508528 | 1.2:+15878377 | MS.gene63015:CDS |
| AAATGGTACAAACACTGTTG+TGG | 0.519598 | 1.2:+15878451 | MS.gene63015:CDS |
| GATCCCTGCGAAGATGAGCT+AGG | 0.520958 | 1.2:-15878087 | None:intergenic |
| CTATATAGTGTGATGTAGAT+GGG | 0.535053 | 1.2:-15877138 | None:intergenic |
| TCTGCTATAAAGGATAGTTA+TGG | 0.535982 | 1.2:+15878007 | MS.gene63015:CDS |
| TATAACATTAGTGCTGGCTG+TGG | 0.541420 | 1.2:+15878413 | MS.gene63015:CDS |
| TCAAGATATGCACTTAGATA+GGG | 0.543210 | 1.2:-15877261 | None:intergenic |
| TGGAATAATAATCTTCTTTG+GGG | 0.555591 | 1.2:-15877602 | None:intergenic |
| CTTGGGTCAAACTTCACACA+TGG | 0.560034 | 1.2:+15877288 | MS.gene63015:CDS |
| GCCCTATTTAGTGGAATAGG+AGG | 0.573956 | 1.2:-15878581 | None:intergenic |
| ACATATACAATTTAGGGGCA+AGG | 0.581070 | 1.2:+15877921 | MS.gene63015:CDS |
| AGGGTTTGAACTTCCACTAG+TGG | 0.582113 | 1.2:+15878361 | MS.gene63015:intron |
| ATCCCTGCGAAGATGAGCTA+GGG | 0.588235 | 1.2:-15878086 | None:intergenic |
| CTTCCACTAGTGGCTTGTTG+TGG | 0.588534 | 1.2:+15878371 | MS.gene63015:CDS |
| ACATATGTGATTGCTGCTAG+TGG | 0.594418 | 1.2:-15878112 | None:intergenic |
| TTGCCACAACAAGCCACTAG+TGG | 0.603337 | 1.2:-15878374 | None:intergenic |
| AAGATTTCATACCTAAAACA+AGG | 0.612054 | 1.2:+15877418 | MS.gene63015:CDS |
| AGCCCTAGCTCATCTTCGCA+GGG | 0.617389 | 1.2:+15878084 | MS.gene63015:CDS |
| ACACTATATAGGAGCTCACA+TGG | 0.628900 | 1.2:+15877150 | MS.gene63015:CDS |
| GTGCAAACTTTGCAACAGCA+GGG | 0.631688 | 1.2:+15877310 | MS.gene63015:CDS |
| TCTACTAGAATAATATGGGA+TGG | 0.641361 | 1.2:+15878491 | MS.gene63015:CDS |
| ACTAGTAATATCATACCTAG+TGG | 0.650422 | 1.2:+15877351 | MS.gene63015:CDS |
| AATGGACTAAACATTCCACT+AGG | 0.660611 | 1.2:-15877366 | None:intergenic |
| TTGAATGTACTGAACCTGAA+GGG | 0.661770 | 1.2:-15877391 | None:intergenic |
| GTGGCTTGTTGTGGCAATGG+AGG | 0.663762 | 1.2:+15878380 | MS.gene63015:CDS |
| ATTGAATGTACTGAACCTGA+AGG | 0.669376 | 1.2:-15877392 | None:intergenic |
| CTAGAACATATACAATTTAG+GGG | 0.696032 | 1.2:+15877916 | MS.gene63015:intron |
| GGATGGTACTCATTACACAG+AGG | 0.801423 | 1.2:+15878508 | MS.gene63015:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAGTAATATATATATAACAA+GGG | - | chr1.2:15877876-15877895 | None:intergenic | 10.0% |
| !! | TATAAAATTCTTTACTATAT+CGG | - | chr1.2:15877718-15877737 | None:intergenic | 10.0% |
| !! | TTAGTAATATATATATAACA+AGG | - | chr1.2:15877877-15877896 | None:intergenic | 10.0% |
| !!! | AATTATTTCTATATTTATGA+AGG | + | chr1.2:15877188-15877207 | MS.gene63015:intron | 10.0% |
| !!! | ATTATTTCTATATTTATGAA+GGG | + | chr1.2:15877189-15877208 | MS.gene63015:intron | 10.0% |
| !! | ATAAAATTCTTTACTATATC+GGG | - | chr1.2:15877717-15877736 | None:intergenic | 15.0% |
| !!! | ATATTTCAATTTAAAGTTGA+AGG | + | chr1.2:15878060-15878079 | MS.gene63015:CDS | 15.0% |
| !!! | GTAAATTTTGAAATTAAGAA+AGG | - | chr1.2:15877553-15877572 | None:intergenic | 15.0% |
| !! | AAAATAGGATCAATTTGATT+TGG | - | chr1.2:15878193-15878212 | None:intergenic | 20.0% |
| !! | TAAATCTTCATTAACATGTA+GGG | + | chr1.2:15878342-15878361 | MS.gene63015:intron | 20.0% |
| !! | TGAAATTAAGAAAGGAAAAA+AGG | - | chr1.2:15877545-15877564 | None:intergenic | 20.0% |
| !! | TTAAATCTTCATTAACATGT+AGG | + | chr1.2:15878341-15878360 | MS.gene63015:intron | 20.0% |
| !! | TTCCAAAATCCAAAAAAATA+CGG | + | chr1.2:15878163-15878182 | MS.gene63015:CDS | 20.0% |
| !! | TTGGAATAATAATCTTCTTT+GGG | - | chr1.2:15877606-15877625 | None:intergenic | 20.0% |
| !!! | ATCTAGAACATATACAATTT+AGG | + | chr1.2:15877914-15877933 | MS.gene63015:intron | 20.0% |
| !!! | GAATTTTATAGAGAATATCA+AGG | + | chr1.2:15877728-15877747 | MS.gene63015:CDS | 20.0% |
| !!! | TCTAGAACATATACAATTTA+GGG | + | chr1.2:15877915-15877934 | MS.gene63015:intron | 20.0% |
| !!! | TTTGGAATAATAATCTTCTT+TGG | - | chr1.2:15877607-15877626 | None:intergenic | 20.0% |
| ! | AACCATCTACTAGAATAATA+TGG | + | chr1.2:15878486-15878505 | MS.gene63015:CDS | 25.0% |
| ! | AAGATTTCATACCTAAAACA+AGG | + | chr1.2:15877418-15877437 | MS.gene63015:CDS | 25.0% |
| ! | AATTTCAAAATTTACTTGCC+AGG | + | chr1.2:15877558-15877577 | MS.gene63015:intron | 25.0% |
| ! | ACCAATATCAAATGTGTATA+AGG | - | chr1.2:15877631-15877650 | None:intergenic | 25.0% |
| ! | ACCATCTACTAGAATAATAT+GGG | + | chr1.2:15878487-15878506 | MS.gene63015:CDS | 25.0% |
| ! | ATTACTAAAATGCAACTTAC+TGG | + | chr1.2:15877889-15877908 | MS.gene63015:intron | 25.0% |
| ! | CTAGAACATATACAATTTAG+GGG | + | chr1.2:15877916-15877935 | MS.gene63015:intron | 25.0% |
| ! | GTTTGTACCATTTATGTTTA+TGG | - | chr1.2:15878444-15878463 | None:intergenic | 25.0% |
| ! | TAGATAAAGTTAGCAGAAAA+GGG | - | chr1.2:15877764-15877783 | None:intergenic | 25.0% |
| ! | TGGAATAATAATCTTCTTTG+GGG | - | chr1.2:15877605-15877624 | None:intergenic | 25.0% |
| !!! | ATTGATCCTATTTTCAAGTT+AGG | + | chr1.2:15878199-15878218 | MS.gene63015:intron | 25.0% |
| !!! | TTGATCCTATTTTCAAGTTA+GGG | + | chr1.2:15878200-15878219 | MS.gene63015:intron | 25.0% |
| ACCTAAAACAAGGTTCATTA+GGG | + | chr1.2:15877428-15877447 | MS.gene63015:CDS | 30.0% | |
| ACTAGTAATATCATACCTAG+TGG | + | chr1.2:15877351-15877370 | MS.gene63015:CDS | 30.0% | |
| ATCAAATGTGTATAAGGCTT+TGG | - | chr1.2:15877625-15877644 | None:intergenic | 30.0% | |
| ATCAAGATATGCACTTAGAT+AGG | - | chr1.2:15877265-15877284 | None:intergenic | 30.0% | |
| ATGTACCCTAACTTGAAAAT+AGG | - | chr1.2:15878208-15878227 | None:intergenic | 30.0% | |
| CAAGTTAGGGTACATATATT+TGG | + | chr1.2:15878213-15878232 | MS.gene63015:intron | 30.0% | |
| CTAGGTATGATATTACTAGT+AGG | - | chr1.2:15877351-15877370 | None:intergenic | 30.0% | |
| CTATATAGTGTGATGTAGAT+GGG | - | chr1.2:15877141-15877160 | None:intergenic | 30.0% | |
| CTTTATAGCAGATGGAAAAT+TGG | - | chr1.2:15877999-15878018 | None:intergenic | 30.0% | |
| GCCTTATACACATTTGATAT+TGG | + | chr1.2:15877627-15877646 | MS.gene63015:CDS | 30.0% | |
| GGAAAATTGGCCAAAATTAA+AGG | - | chr1.2:15877986-15878005 | None:intergenic | 30.0% | |
| GTAGATAAAGTTAGCAGAAA+AGG | - | chr1.2:15877765-15877784 | None:intergenic | 30.0% | |
| TAACTATCCTTTATAGCAGA+TGG | - | chr1.2:15878007-15878026 | None:intergenic | 30.0% | |
| TACAACTATAACATTAGTGC+TGG | + | chr1.2:15878407-15878426 | MS.gene63015:CDS | 30.0% | |
| TACCTAAAACAAGGTTCATT+AGG | + | chr1.2:15877427-15877446 | MS.gene63015:CDS | 30.0% | |
| TCAAGATATGCACTTAGATA+GGG | - | chr1.2:15877264-15877283 | None:intergenic | 30.0% | |
| TCCCATATTATTCTAGTAGA+TGG | - | chr1.2:15878491-15878510 | None:intergenic | 30.0% | |
| TCTACTAGAATAATATGGGA+TGG | + | chr1.2:15878491-15878510 | MS.gene63015:CDS | 30.0% | |
| TCTGCTATAAAGGATAGTTA+TGG | + | chr1.2:15878007-15878026 | MS.gene63015:CDS | 30.0% | |
| TTTGTGTCCTTAATTAAGCT+CGG | - | chr1.2:15877518-15877537 | None:intergenic | 30.0% | |
| ! | ATTAAAGGTACACATCCAAT+TGG | - | chr1.2:15877971-15877990 | None:intergenic | 30.0% |
| ! | CAATTTTCCATCTGCTATAA+AGG | + | chr1.2:15877997-15878016 | MS.gene63015:CDS | 30.0% |
| ! | TCATTTTGGATACATAACAC+TGG | + | chr1.2:15877944-15877963 | MS.gene63015:CDS | 30.0% |
| !! | ATGTTGACTCGCTATAATTA+TGG | + | chr1.2:15878286-15878305 | MS.gene63015:intron | 30.0% |
| !! | TGGATGTGTACCTTTAATTT+TGG | + | chr1.2:15877973-15877992 | MS.gene63015:CDS | 30.0% |
| !!! | CACCGTATTTTTTTGGATTT+TGG | - | chr1.2:15878168-15878187 | None:intergenic | 30.0% |
| AAATGGTACAAACACTGTTG+TGG | + | chr1.2:15878451-15878470 | MS.gene63015:CDS | 35.0% | |
| AATGGTACAAACACTGTTGT+GGG | + | chr1.2:15878452-15878471 | MS.gene63015:CDS | 35.0% | |
| ACATATACAATTTAGGGGCA+AGG | + | chr1.2:15877921-15877940 | MS.gene63015:CDS | 35.0% | |
| AGTGCATATCTTGATTCTCT+TGG | + | chr1.2:15877270-15877289 | MS.gene63015:CDS | 35.0% | |
| ATACATAACACTGGACCAAT+TGG | + | chr1.2:15877953-15877972 | MS.gene63015:CDS | 35.0% | |
| ATCCTCCTATTCCACTAAAT+AGG | + | chr1.2:15878579-15878598 | MS.gene63015:CDS | 35.0% | |
| ATTGAATGTACTGAACCTGA+AGG | - | chr1.2:15877395-15877414 | None:intergenic | 35.0% | |
| CCATCTACATCACACTATAT+AGG | + | chr1.2:15877139-15877158 | MS.gene63015:CDS | 35.0% | |
| CCTATATAGTGTGATGTAGA+TGG | - | chr1.2:15877142-15877161 | None:intergenic | 35.0% | |
| GGAGCAACCATAAACATAAA+TGG | + | chr1.2:15878434-15878453 | MS.gene63015:CDS | 35.0% | |
| GGGTACATATATTTGGATTG+CGG | + | chr1.2:15878220-15878239 | MS.gene63015:intron | 35.0% | |
| GTCTTTGATCAAATCTCTAC+TGG | + | chr1.2:15878545-15878564 | MS.gene63015:CDS | 35.0% | |
| GTGCATATCTTGATTCTCTT+GGG | + | chr1.2:15877271-15877290 | MS.gene63015:CDS | 35.0% | |
| TCCTCCTATTCCACTAAATA+GGG | + | chr1.2:15878580-15878599 | MS.gene63015:CDS | 35.0% | |
| TGTGATTCCGAGCTTAATTA+AGG | + | chr1.2:15877508-15877527 | MS.gene63015:intron | 35.0% | |
| TTCAAAATTTACTTGCCAGG+AGG | + | chr1.2:15877561-15877580 | MS.gene63015:intron | 35.0% | |
| TTGAATGTACTGAACCTGAA+GGG | - | chr1.2:15877394-15877413 | None:intergenic | 35.0% | |
| !! | AATGGACTAAACATTCCACT+AGG | - | chr1.2:15877369-15877388 | None:intergenic | 35.0% |
| !! | GATGTAGATGGGTTTGTTAT+TGG | - | chr1.2:15877130-15877149 | None:intergenic | 35.0% |
| !!! | GATCTTACTGCTGGATTTTT+TGG | + | chr1.2:15877657-15877676 | MS.gene63015:CDS | 35.0% |
| !!! | TCCCTAATGAACCTTGTTTT+AGG | - | chr1.2:15877432-15877451 | None:intergenic | 35.0% |
| !!! | TTTGGCTCACCGTATTTTTT+TGG | - | chr1.2:15878175-15878194 | None:intergenic | 35.0% |
| !!! | TTTTGGAAAAGAGAGTGCTT+TGG | - | chr1.2:15878151-15878170 | None:intergenic | 35.0% |
| AATGTTGCAAATACACCTCC+TGG | - | chr1.2:15877579-15877598 | None:intergenic | 40.0% | |
| ACAAGGTTCATTAGGGATCA+AGG | + | chr1.2:15877435-15877454 | MS.gene63015:CDS | 40.0% | |
| ACACTATATAGGAGCTCACA+TGG | + | chr1.2:15877150-15877169 | MS.gene63015:CDS | 40.0% | |
| ACATATGTGATTGCTGCTAG+TGG | - | chr1.2:15878115-15878134 | None:intergenic | 40.0% | |
| CATGCCCTATTTAGTGGAAT+AGG | - | chr1.2:15878587-15878606 | None:intergenic | 40.0% | |
| CTGTAACATGCCCTATTTAG+TGG | - | chr1.2:15878593-15878612 | None:intergenic | 40.0% | |
| GGTCAAAATGATCTTACTGC+TGG | + | chr1.2:15877648-15877667 | MS.gene63015:CDS | 40.0% | |
| TACTGAACCTGAAGGGAAAA+TGG | - | chr1.2:15877387-15877406 | None:intergenic | 40.0% | |
| ! | ATTTAGGGGCAAGGTCATTT+TGG | + | chr1.2:15877930-15877949 | MS.gene63015:CDS | 40.0% |
| ! | GTTTAGTCCATTTTCCCTTC+AGG | + | chr1.2:15877377-15877396 | MS.gene63015:CDS | 40.0% |
| !! | TATAACATTAGTGCTGGCTG+TGG | + | chr1.2:15878413-15878432 | MS.gene63015:CDS | 40.0% |
| AGGGTTTGAACTTCCACTAG+TGG | + | chr1.2:15878361-15878380 | MS.gene63015:intron | 45.0% | |
| CTTGGGTCAAACTTCACACA+TGG | + | chr1.2:15877288-15877307 | MS.gene63015:CDS | 45.0% | |
| GCCCTATTTAGTGGAATAGG+AGG | - | chr1.2:15878584-15878603 | None:intergenic | 45.0% | |
| GGATGGTACTCATTACACAG+AGG | + | chr1.2:15878508-15878527 | MS.gene63015:CDS | 45.0% | |
| GTGCAAACTTTGCAACAGCA+GGG | + | chr1.2:15877310-15877329 | MS.gene63015:CDS | 45.0% | |
| ATCCCTGCGAAGATGAGCTA+GGG | - | chr1.2:15878089-15878108 | None:intergenic | 50.0% | |
| GGTGCAAACTTTGCAACAGC+AGG | + | chr1.2:15877309-15877328 | MS.gene63015:CDS | 50.0% | |
| TTGCCACAACAAGCCACTAG+TGG | - | chr1.2:15878377-15878396 | None:intergenic | 50.0% | |
| !! | CTAGTGGCTTGTTGTGGCAA+TGG | + | chr1.2:15878377-15878396 | MS.gene63015:CDS | 50.0% |
| !! | CTTCCACTAGTGGCTTGTTG+TGG | + | chr1.2:15878371-15878390 | MS.gene63015:CDS | 50.0% |
| AAGCCCTAGCTCATCTTCGC+AGG | + | chr1.2:15878083-15878102 | MS.gene63015:CDS | 55.0% | |
| AGCCCTAGCTCATCTTCGCA+GGG | + | chr1.2:15878084-15878103 | MS.gene63015:CDS | 55.0% | |
| GATCCCTGCGAAGATGAGCT+AGG | - | chr1.2:15878090-15878109 | None:intergenic | 55.0% | |
| !! | GTGGCTTGTTGTGGCAATGG+AGG | + | chr1.2:15878380-15878399 | MS.gene63015:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 15877120 | 15878619 | 15877120 | ID=MS.gene63015 |
| chr1.2 | mRNA | 15877120 | 15878619 | 15877120 | ID=MS.gene63015.t1;Parent=MS.gene63015 |
| chr1.2 | exon | 15877120 | 15877171 | 15877120 | ID=MS.gene63015.t1.exon1;Parent=MS.gene63015.t1 |
| chr1.2 | CDS | 15877120 | 15877171 | 15877120 | ID=cds.MS.gene63015.t1;Parent=MS.gene63015.t1 |
| chr1.2 | exon | 15877244 | 15877456 | 15877244 | ID=MS.gene63015.t1.exon2;Parent=MS.gene63015.t1 |
| chr1.2 | CDS | 15877244 | 15877456 | 15877244 | ID=cds.MS.gene63015.t1;Parent=MS.gene63015.t1 |
| chr1.2 | exon | 15877580 | 15877749 | 15877580 | ID=MS.gene63015.t1.exon3;Parent=MS.gene63015.t1 |
| chr1.2 | CDS | 15877580 | 15877749 | 15877580 | ID=cds.MS.gene63015.t1;Parent=MS.gene63015.t1 |
| chr1.2 | exon | 15877920 | 15878184 | 15877920 | ID=MS.gene63015.t1.exon4;Parent=MS.gene63015.t1 |
| chr1.2 | CDS | 15877920 | 15878184 | 15877920 | ID=cds.MS.gene63015.t1;Parent=MS.gene63015.t1 |
| chr1.2 | exon | 15878363 | 15878619 | 15878363 | ID=MS.gene63015.t1.exon5;Parent=MS.gene63015.t1 |
| chr1.2 | CDS | 15878363 | 15878619 | 15878363 | ID=cds.MS.gene63015.t1;Parent=MS.gene63015.t1 |
| Gene Sequence |
| Protein sequence |
