Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65287.t1 | AAV66071.1 | 100 | 370 | 0 | 0 | 1 | 370 | 1 | 370 | 8.00E-217 | 762.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65287.t1 | Q03467 | 91.6 | 371 | 29 | 2 | 1 | 370 | 1 | 370 | 4.0e-201 | 701.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65287.t1 | Q5RLY0 | 100.0 | 370 | 0 | 0 | 1 | 370 | 1 | 370 | 5.7e-217 | 762.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049267 | MS.gene65287 | 0.802769 | 4.79E-49 | -1.69E-46 |
| MS.gene050096 | MS.gene65287 | 0.815168 | 1.06E-51 | -1.69E-46 |
| MS.gene050380 | MS.gene65287 | 0.835853 | 1.32E-56 | -1.69E-46 |
| MS.gene051158 | MS.gene65287 | 0.810092 | 1.37E-50 | -1.69E-46 |
| MS.gene053406 | MS.gene65287 | 0.833476 | 5.22E-56 | -1.69E-46 |
| MS.gene054290 | MS.gene65287 | 0.825364 | 4.88E-54 | -1.69E-46 |
| MS.gene055124 | MS.gene65287 | 0.838416 | 2.91E-57 | -1.69E-46 |
| MS.gene055601 | MS.gene65287 | 0.8088 | 2.59E-50 | -1.69E-46 |
| MS.gene056330 | MS.gene65287 | 0.806972 | 6.34E-50 | -1.69E-46 |
| MS.gene058093 | MS.gene65287 | 0.818159 | 2.27E-52 | -1.69E-46 |
| MS.gene058179 | MS.gene65287 | 0.818837 | 1.59E-52 | -1.69E-46 |
| MS.gene058218 | MS.gene65287 | 0.875617 | 2.67E-68 | -1.69E-46 |
| MS.gene058840 | MS.gene65287 | 0.812092 | 5.05E-51 | -1.69E-46 |
| MS.gene059037 | MS.gene65287 | 0.820782 | 5.72E-53 | -1.69E-46 |
| MS.gene059043 | MS.gene65287 | 0.81183 | 5.75E-51 | -1.69E-46 |
| MS.gene060578 | MS.gene65287 | 0.803697 | 3.08E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65287.t1 | MTR_2g034480 | 97.784 | 361 | 8 | 0 | 10 | 370 | 2 | 362 | 0.0 | 726 |
| MS.gene65287.t1 | MTR_2g034470 | 76.657 | 347 | 77 | 2 | 24 | 370 | 20 | 362 | 0.0 | 540 |
| MS.gene65287.t1 | MTR_2g034470 | 77.273 | 330 | 72 | 1 | 41 | 370 | 1 | 327 | 0.0 | 521 |
| MS.gene65287.t1 | MTR_2g034440 | 77.532 | 316 | 70 | 1 | 33 | 347 | 20 | 335 | 0.0 | 505 |
| MS.gene65287.t1 | MTR_4g076570 | 55.312 | 320 | 138 | 4 | 30 | 346 | 16 | 333 | 2.75e-120 | 352 |
| MS.gene65287.t1 | MTR_4g076470 | 54.819 | 332 | 141 | 4 | 17 | 347 | 5 | 328 | 3.95e-120 | 350 |
| MS.gene65287.t1 | MTR_1g052430 | 55.627 | 311 | 134 | 3 | 35 | 343 | 32 | 340 | 1.49e-118 | 349 |
| MS.gene65287.t1 | MTR_4g076440 | 54.518 | 332 | 142 | 4 | 17 | 347 | 5 | 328 | 7.59e-116 | 340 |
| MS.gene65287.t1 | MTR_4g076430 | 53.916 | 332 | 144 | 4 | 17 | 347 | 5 | 328 | 5.79e-114 | 335 |
| MS.gene65287.t1 | MTR_4g076490 | 51.754 | 342 | 155 | 5 | 10 | 349 | 72 | 405 | 2.35e-112 | 334 |
| MS.gene65287.t1 | MTR_4g076255 | 54.375 | 320 | 135 | 6 | 30 | 347 | 20 | 330 | 6.91e-110 | 325 |
| MS.gene65287.t1 | MTR_4g076500 | 51.118 | 313 | 142 | 6 | 30 | 337 | 72 | 378 | 2.92e-103 | 310 |
| MS.gene65287.t1 | MTR_7g081350 | 44.444 | 315 | 165 | 6 | 35 | 345 | 27 | 335 | 5.16e-81 | 251 |
| MS.gene65287.t1 | MTR_7g081370 | 41.194 | 335 | 178 | 6 | 13 | 345 | 6 | 323 | 1.24e-74 | 234 |
| MS.gene65287.t1 | MTR_5g085580 | 43.077 | 325 | 170 | 9 | 30 | 343 | 20 | 340 | 4.27e-74 | 238 |
| MS.gene65287.t1 | MTR_6g088885 | 36.578 | 339 | 200 | 8 | 35 | 363 | 27 | 360 | 7.76e-70 | 227 |
| MS.gene65287.t1 | MTR_1g056640 | 39.375 | 320 | 179 | 8 | 35 | 343 | 38 | 353 | 4.39e-69 | 225 |
| MS.gene65287.t1 | MTR_4g010200 | 38.272 | 324 | 191 | 6 | 36 | 351 | 34 | 356 | 7.33e-68 | 219 |
| MS.gene65287.t1 | MTR_3g080410 | 40.841 | 333 | 180 | 10 | 33 | 352 | 24 | 352 | 2.70e-67 | 216 |
| MS.gene65287.t1 | MTR_4g114850 | 35.174 | 344 | 200 | 10 | 36 | 367 | 27 | 359 | 1.44e-66 | 215 |
| MS.gene65287.t1 | MTR_4g114850 | 35.174 | 344 | 200 | 10 | 36 | 367 | 27 | 359 | 1.62e-66 | 214 |
| MS.gene65287.t1 | MTR_4g114850 | 35.174 | 344 | 200 | 10 | 36 | 367 | 27 | 359 | 1.97e-66 | 215 |
| MS.gene65287.t1 | MTR_4g069940 | 38.596 | 342 | 196 | 9 | 17 | 347 | 10 | 348 | 1.14e-65 | 215 |
| MS.gene65287.t1 | MTR_4g084480 | 37.143 | 350 | 210 | 7 | 8 | 349 | 5 | 352 | 9.54e-65 | 211 |
| MS.gene65287.t1 | MTR_4g084480 | 37.143 | 350 | 210 | 7 | 8 | 349 | 5 | 352 | 1.28e-64 | 211 |
| MS.gene65287.t1 | MTR_3g116510 | 37.318 | 343 | 201 | 9 | 17 | 348 | 9 | 348 | 4.11e-64 | 211 |
| MS.gene65287.t1 | MTR_4g084480 | 37.830 | 341 | 202 | 7 | 17 | 349 | 7 | 345 | 5.85e-64 | 209 |
| MS.gene65287.t1 | MTR_1g077990 | 37.309 | 327 | 196 | 7 | 28 | 347 | 24 | 348 | 1.02e-63 | 209 |
| MS.gene65287.t1 | MTR_2g086530 | 35.860 | 343 | 198 | 10 | 36 | 362 | 9 | 345 | 1.36e-63 | 207 |
| MS.gene65287.t1 | MTR_2g086530 | 34.530 | 362 | 215 | 10 | 17 | 362 | 11 | 366 | 1.47e-63 | 207 |
| MS.gene65287.t1 | MTR_8g012400 | 35.673 | 342 | 203 | 10 | 22 | 350 | 17 | 354 | 4.20e-63 | 209 |
| MS.gene65287.t1 | MTR_7g053500 | 34.545 | 330 | 200 | 9 | 34 | 350 | 25 | 351 | 4.15e-62 | 206 |
| MS.gene65287.t1 | MTR_1g031900 | 38.081 | 344 | 200 | 7 | 17 | 349 | 6 | 347 | 1.54e-61 | 206 |
| MS.gene65287.t1 | MTR_1g031900 | 38.081 | 344 | 200 | 7 | 17 | 349 | 6 | 347 | 1.74e-61 | 205 |
| MS.gene65287.t1 | MTR_4g052970 | 36.025 | 322 | 196 | 7 | 36 | 349 | 30 | 349 | 2.45e-61 | 202 |
| MS.gene65287.t1 | MTR_1g007810 | 37.861 | 346 | 199 | 10 | 35 | 370 | 16 | 355 | 6.14e-61 | 200 |
| MS.gene65287.t1 | MTR_1g022160 | 36.364 | 330 | 200 | 7 | 31 | 351 | 20 | 348 | 8.92e-61 | 201 |
| MS.gene65287.t1 | MTR_1g022160 | 36.364 | 330 | 200 | 7 | 31 | 351 | 20 | 348 | 5.10e-60 | 201 |
| MS.gene65287.t1 | MTR_1g022160 | 36.364 | 330 | 200 | 7 | 31 | 351 | 20 | 348 | 5.75e-60 | 201 |
| MS.gene65287.t1 | MTR_1g022160 | 36.364 | 330 | 200 | 7 | 31 | 351 | 20 | 348 | 8.43e-60 | 200 |
| MS.gene65287.t1 | MTR_7g026340 | 38.199 | 322 | 183 | 12 | 35 | 347 | 23 | 337 | 1.14e-58 | 197 |
| MS.gene65287.t1 | MTR_5g078200 | 35.714 | 364 | 219 | 9 | 18 | 369 | 5 | 365 | 2.45e-57 | 197 |
| MS.gene65287.t1 | MTR_4g124440 | 34.463 | 354 | 217 | 9 | 9 | 352 | 4 | 352 | 1.46e-56 | 192 |
| MS.gene65287.t1 | MTR_4g132280 | 35.780 | 327 | 195 | 8 | 35 | 349 | 45 | 368 | 2.72e-56 | 192 |
| MS.gene65287.t1 | MTR_4g088155 | 33.828 | 337 | 203 | 10 | 31 | 351 | 19 | 351 | 1.27e-55 | 189 |
| MS.gene65287.t1 | MTR_3g065460 | 35.112 | 356 | 213 | 10 | 17 | 359 | 5 | 355 | 1.89e-54 | 186 |
| MS.gene65287.t1 | MTR_3g083580 | 33.333 | 345 | 214 | 9 | 15 | 347 | 8 | 348 | 1.10e-53 | 185 |
| MS.gene65287.t1 | MTR_5g078200 | 35.522 | 335 | 202 | 8 | 46 | 369 | 1 | 332 | 6.60e-53 | 185 |
| MS.gene65287.t1 | MTR_2g019345 | 36.196 | 326 | 193 | 9 | 33 | 346 | 18 | 340 | 8.40e-53 | 180 |
| MS.gene65287.t1 | MTR_8g085720 | 33.978 | 362 | 221 | 10 | 13 | 363 | 7 | 361 | 4.62e-52 | 180 |
| MS.gene65287.t1 | MTR_2g027560 | 33.841 | 328 | 206 | 6 | 31 | 348 | 24 | 350 | 1.36e-51 | 179 |
| MS.gene65287.t1 | MTR_7g085390 | 31.818 | 352 | 226 | 7 | 17 | 358 | 10 | 357 | 3.11e-51 | 178 |
| MS.gene65287.t1 | MTR_8g092070 | 31.790 | 324 | 212 | 5 | 35 | 350 | 34 | 356 | 1.58e-50 | 178 |
| MS.gene65287.t1 | MTR_4g083500 | 36.310 | 336 | 197 | 12 | 30 | 354 | 39 | 368 | 1.05e-49 | 175 |
| MS.gene65287.t1 | MTR_1g010120 | 32.378 | 349 | 221 | 8 | 17 | 355 | 10 | 353 | 1.09e-48 | 171 |
| MS.gene65287.t1 | MTR_8g102340 | 32.209 | 326 | 173 | 9 | 35 | 350 | 28 | 315 | 1.59e-48 | 171 |
| MS.gene65287.t1 | MTR_3g095050 | 31.461 | 356 | 223 | 10 | 10 | 350 | 5 | 354 | 2.11e-48 | 171 |
| MS.gene65287.t1 | MTR_4g112025 | 31.268 | 355 | 229 | 8 | 17 | 358 | 14 | 366 | 1.11e-47 | 169 |
| MS.gene65287.t1 | MTR_6g032820 | 32.298 | 322 | 204 | 6 | 35 | 344 | 26 | 345 | 3.98e-47 | 166 |
| MS.gene65287.t1 | MTR_8g012400 | 34.420 | 276 | 165 | 9 | 88 | 350 | 2 | 274 | 4.40e-47 | 164 |
| MS.gene65287.t1 | MTR_1g053320 | 30.484 | 351 | 231 | 6 | 14 | 351 | 6 | 356 | 6.96e-47 | 166 |
| MS.gene65287.t1 | MTR_3g108600 | 32.231 | 363 | 208 | 10 | 5 | 355 | 4 | 340 | 1.72e-46 | 165 |
| MS.gene65287.t1 | MTR_7g053500 | 33.333 | 276 | 168 | 9 | 88 | 350 | 2 | 274 | 1.40e-44 | 158 |
| MS.gene65287.t1 | MTR_3g031770 | 31.611 | 329 | 214 | 8 | 28 | 348 | 20 | 345 | 7.63e-44 | 158 |
| MS.gene65287.t1 | MTR_5g081720 | 33.220 | 295 | 178 | 12 | 60 | 343 | 62 | 348 | 2.96e-35 | 133 |
| MS.gene65287.t1 | MTR_4g134280 | 35.043 | 234 | 143 | 5 | 122 | 348 | 2 | 233 | 3.00e-35 | 133 |
| MS.gene65287.t1 | MTR_3g116510 | 36.744 | 215 | 126 | 6 | 143 | 348 | 1 | 214 | 1.52e-34 | 130 |
| MS.gene65287.t1 | MTR_4g036680 | 55.319 | 94 | 40 | 2 | 252 | 343 | 80 | 173 | 1.85e-27 | 108 |
| MS.gene65287.t1 | MTR_4g036680 | 66.667 | 63 | 21 | 0 | 35 | 97 | 22 | 84 | 1.32e-23 | 97.8 |
| MS.gene65287.t1 | MTR_4g036775 | 55.319 | 94 | 40 | 2 | 252 | 343 | 80 | 173 | 6.33e-27 | 107 |
| MS.gene65287.t1 | MTR_4g036775 | 56.790 | 81 | 32 | 1 | 17 | 97 | 7 | 84 | 7.78e-24 | 98.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65287.t1 | AT4G16260 | 61.494 | 348 | 125 | 5 | 13 | 356 | 1 | 343 | 1.05e-151 | 431 |
| MS.gene65287.t1 | AT4G16260 | 63.636 | 319 | 108 | 4 | 41 | 356 | 1 | 314 | 1.35e-142 | 407 |
| MS.gene65287.t1 | AT3G57240 | 56.875 | 320 | 127 | 6 | 30 | 347 | 30 | 340 | 8.91e-115 | 337 |
| MS.gene65287.t1 | AT3G57270 | 51.524 | 328 | 152 | 4 | 23 | 347 | 16 | 339 | 7.56e-111 | 327 |
| MS.gene65287.t1 | AT3G57260 | 50.440 | 341 | 156 | 5 | 12 | 347 | 6 | 338 | 1.70e-109 | 324 |
| MS.gene65287.t1 | AT3G57260 | 50.440 | 341 | 156 | 5 | 12 | 347 | 22 | 354 | 2.69e-109 | 324 |
| MS.gene65287.t1 | AT5G56590 | 38.024 | 334 | 187 | 8 | 34 | 353 | 25 | 352 | 9.64e-76 | 243 |
| MS.gene65287.t1 | AT5G20390 | 39.873 | 316 | 179 | 6 | 31 | 341 | 29 | 338 | 1.29e-75 | 238 |
| MS.gene65287.t1 | AT2G16230 | 40.308 | 325 | 185 | 6 | 31 | 347 | 21 | 344 | 2.23e-71 | 231 |
| MS.gene65287.t1 | AT5G20340 | 38.924 | 316 | 182 | 6 | 31 | 341 | 39 | 348 | 1.07e-70 | 225 |
| MS.gene65287.t1 | AT5G20330 | 39.748 | 317 | 180 | 6 | 30 | 341 | 29 | 339 | 7.08e-70 | 223 |
| MS.gene65287.t1 | AT2G26600 | 35.625 | 320 | 197 | 6 | 36 | 347 | 35 | 353 | 1.91e-69 | 223 |
| MS.gene65287.t1 | AT1G33220 | 38.245 | 319 | 185 | 7 | 11 | 324 | 11 | 322 | 1.80e-67 | 216 |
| MS.gene65287.t1 | AT3G15800 | 36.578 | 339 | 203 | 8 | 36 | 364 | 44 | 380 | 7.27e-67 | 217 |
| MS.gene65287.t1 | AT4G26830 | 37.243 | 341 | 197 | 9 | 30 | 359 | 24 | 358 | 4.96e-66 | 216 |
| MS.gene65287.t1 | AT4G26830 | 36.620 | 355 | 207 | 10 | 16 | 359 | 7 | 354 | 6.89e-66 | 216 |
| MS.gene65287.t1 | AT2G05790 | 39.024 | 328 | 187 | 8 | 33 | 350 | 23 | 347 | 8.57e-66 | 216 |
| MS.gene65287.t1 | AT5G55180 | 38.485 | 330 | 182 | 10 | 35 | 350 | 27 | 349 | 1.38e-65 | 215 |
| MS.gene65287.t1 | AT5G55180 | 38.485 | 330 | 182 | 10 | 35 | 350 | 27 | 349 | 1.63e-65 | 215 |
| MS.gene65287.t1 | AT5G42720 | 36.812 | 345 | 206 | 8 | 19 | 352 | 8 | 351 | 6.21e-65 | 213 |
| MS.gene65287.t1 | AT5G20560 | 36.308 | 325 | 196 | 7 | 18 | 337 | 18 | 336 | 1.61e-64 | 209 |
| MS.gene65287.t1 | AT4G29360 | 39.755 | 327 | 185 | 7 | 33 | 350 | 25 | 348 | 1.68e-64 | 214 |
| MS.gene65287.t1 | AT4G29360 | 39.755 | 327 | 185 | 7 | 33 | 350 | 35 | 358 | 1.81e-64 | 214 |
| MS.gene65287.t1 | AT4G34480 | 39.053 | 338 | 193 | 8 | 22 | 348 | 11 | 346 | 2.83e-64 | 209 |
| MS.gene65287.t1 | AT1G77790 | 38.012 | 342 | 195 | 8 | 10 | 343 | 7 | 339 | 2.39e-63 | 206 |
| MS.gene65287.t1 | AT4G34480 | 39.053 | 338 | 193 | 8 | 22 | 348 | 11 | 346 | 1.72e-62 | 208 |
| MS.gene65287.t1 | AT1G32860 | 36.810 | 326 | 192 | 8 | 34 | 348 | 28 | 350 | 1.73e-62 | 206 |
| MS.gene65287.t1 | AT5G42100 | 38.710 | 341 | 189 | 10 | 19 | 346 | 14 | 347 | 4.61e-62 | 205 |
| MS.gene65287.t1 | AT5G42100 | 38.710 | 341 | 189 | 10 | 19 | 346 | 14 | 347 | 4.79e-62 | 205 |
| MS.gene65287.t1 | AT2G01630 | 36.765 | 340 | 198 | 8 | 32 | 359 | 20 | 354 | 4.09e-60 | 199 |
| MS.gene65287.t1 | AT5G24318 | 37.572 | 346 | 195 | 11 | 16 | 346 | 6 | 345 | 8.44e-60 | 197 |
| MS.gene65287.t1 | AT2G01630 | 36.765 | 340 | 198 | 8 | 32 | 359 | 20 | 354 | 1.77e-59 | 199 |
| MS.gene65287.t1 | AT5G24318 | 37.572 | 346 | 195 | 11 | 16 | 346 | 6 | 345 | 8.59e-59 | 197 |
| MS.gene65287.t1 | AT2G01630 | 36.765 | 340 | 198 | 8 | 32 | 359 | 20 | 354 | 8.86e-59 | 198 |
| MS.gene65287.t1 | AT5G24318 | 37.572 | 346 | 195 | 11 | 16 | 346 | 6 | 345 | 1.20e-58 | 197 |
| MS.gene65287.t1 | AT4G18340 | 35.775 | 355 | 206 | 10 | 8 | 348 | 7 | 353 | 2.07e-58 | 194 |
| MS.gene65287.t1 | AT1G77780 | 37.179 | 312 | 186 | 7 | 36 | 343 | 25 | 330 | 2.93e-58 | 193 |
| MS.gene65287.t1 | AT4G18340 | 35.904 | 376 | 221 | 11 | 8 | 368 | 7 | 377 | 3.11e-58 | 194 |
| MS.gene65287.t1 | AT3G61810 | 36.503 | 326 | 187 | 8 | 35 | 348 | 55 | 372 | 5.45e-58 | 193 |
| MS.gene65287.t1 | AT1G11820 | 34.848 | 330 | 200 | 8 | 32 | 349 | 41 | 367 | 1.08e-57 | 192 |
| MS.gene65287.t1 | AT3G07320 | 34.139 | 331 | 196 | 9 | 36 | 350 | 26 | 350 | 1.17e-57 | 194 |
| MS.gene65287.t1 | AT2G27500 | 33.127 | 323 | 207 | 6 | 35 | 349 | 29 | 350 | 2.01e-57 | 191 |
| MS.gene65287.t1 | AT2G27500 | 33.127 | 323 | 207 | 6 | 35 | 349 | 29 | 350 | 4.48e-57 | 191 |
| MS.gene65287.t1 | AT1G11820 | 34.848 | 330 | 200 | 8 | 32 | 349 | 41 | 367 | 1.68e-56 | 192 |
| MS.gene65287.t1 | AT1G11820 | 34.848 | 330 | 200 | 8 | 32 | 349 | 41 | 367 | 3.53e-56 | 192 |
| MS.gene65287.t1 | AT1G30080 | 34.000 | 350 | 215 | 9 | 10 | 346 | 7 | 353 | 5.77e-56 | 188 |
| MS.gene65287.t1 | AT5G58090 | 34.132 | 334 | 207 | 8 | 33 | 356 | 20 | 350 | 6.26e-56 | 190 |
| MS.gene65287.t1 | AT1G30080 | 34.286 | 350 | 214 | 9 | 10 | 346 | 7 | 353 | 1.03e-55 | 188 |
| MS.gene65287.t1 | AT1G66250 | 36.391 | 327 | 194 | 7 | 29 | 343 | 24 | 348 | 2.15e-54 | 187 |
| MS.gene65287.t1 | AT5G18220 | 31.564 | 358 | 234 | 6 | 9 | 358 | 4 | 358 | 9.97e-54 | 184 |
| MS.gene65287.t1 | AT4G17180 | 34.018 | 341 | 206 | 8 | 20 | 348 | 7 | 340 | 1.36e-53 | 184 |
| MS.gene65287.t1 | AT2G26600 | 36.154 | 260 | 157 | 6 | 96 | 347 | 1 | 259 | 3.52e-53 | 178 |
| MS.gene65287.t1 | AT3G46570 | 39.466 | 337 | 185 | 13 | 22 | 346 | 14 | 343 | 7.99e-53 | 179 |
| MS.gene65287.t1 | AT4G14080 | 32.727 | 330 | 207 | 9 | 33 | 350 | 40 | 366 | 2.20e-51 | 178 |
| MS.gene65287.t1 | AT2G19440 | 32.448 | 339 | 216 | 8 | 35 | 363 | 21 | 356 | 3.51e-51 | 177 |
| MS.gene65287.t1 | AT2G19440 | 32.448 | 339 | 216 | 8 | 35 | 363 | 21 | 356 | 3.51e-51 | 177 |
| MS.gene65287.t1 | AT4G31140 | 34.365 | 323 | 201 | 7 | 35 | 348 | 27 | 347 | 5.23e-51 | 177 |
| MS.gene65287.t1 | AT3G55430 | 37.092 | 337 | 192 | 15 | 28 | 354 | 22 | 348 | 5.28e-51 | 176 |
| MS.gene65287.t1 | AT3G23770 | 33.832 | 334 | 205 | 9 | 33 | 352 | 35 | 366 | 9.50e-50 | 174 |
| MS.gene65287.t1 | AT3G13560 | 33.951 | 324 | 199 | 8 | 33 | 344 | 24 | 344 | 1.77e-49 | 174 |
| MS.gene65287.t1 | AT3G13560 | 33.951 | 324 | 199 | 8 | 33 | 344 | 24 | 344 | 1.77e-49 | 174 |
| MS.gene65287.t1 | AT3G13560 | 33.951 | 324 | 199 | 8 | 33 | 344 | 24 | 344 | 1.77e-49 | 174 |
| MS.gene65287.t1 | AT3G13560 | 33.951 | 324 | 199 | 8 | 33 | 344 | 24 | 344 | 1.77e-49 | 174 |
| MS.gene65287.t1 | AT3G13560 | 33.951 | 324 | 199 | 8 | 33 | 344 | 24 | 344 | 1.77e-49 | 174 |
| MS.gene65287.t1 | AT1G64760 | 31.737 | 334 | 215 | 8 | 35 | 358 | 25 | 355 | 1.17e-48 | 171 |
| MS.gene65287.t1 | AT1G64760 | 31.737 | 334 | 215 | 8 | 35 | 358 | 25 | 355 | 1.17e-48 | 171 |
| MS.gene65287.t1 | AT3G04010 | 31.831 | 355 | 227 | 8 | 15 | 358 | 13 | 363 | 3.32e-48 | 170 |
| MS.gene65287.t1 | AT5G20870 | 31.143 | 350 | 225 | 7 | 17 | 351 | 12 | 360 | 8.09e-48 | 169 |
| MS.gene65287.t1 | AT5G58480 | 32.132 | 333 | 213 | 6 | 25 | 347 | 16 | 345 | 8.76e-48 | 169 |
| MS.gene65287.t1 | AT5G64790 | 30.973 | 339 | 221 | 7 | 22 | 350 | 15 | 350 | 2.07e-47 | 168 |
| MS.gene65287.t1 | AT3G24330 | 30.000 | 340 | 227 | 7 | 25 | 354 | 29 | 367 | 2.48e-46 | 165 |
| MS.gene65287.t1 | AT2G27500 | 32.601 | 273 | 175 | 6 | 85 | 349 | 1 | 272 | 9.60e-45 | 156 |
| MS.gene65287.t1 | AT2G39640 | 33.140 | 344 | 214 | 12 | 9 | 346 | 6 | 339 | 1.63e-44 | 161 |
| MS.gene65287.t1 | AT3G55780 | 32.817 | 323 | 195 | 13 | 60 | 366 | 60 | 376 | 3.24e-38 | 141 |
| MS.gene65287.t1 | AT4G34480 | 40.000 | 235 | 130 | 7 | 123 | 348 | 3 | 235 | 8.06e-35 | 132 |
| MS.gene65287.t1 | AT5G24318 | 38.278 | 209 | 116 | 7 | 147 | 346 | 2 | 206 | 6.01e-32 | 122 |
Find 107 sgRNAs with CRISPR-Local
Find 192 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTATAGCTTGATATATATTT+TGG | 0.089197 | 2.2:+54556470 | None:intergenic |
| GCTATTGACATGACCCTTAT+TGG | 0.130417 | 2.2:-54556409 | MS.gene65287:CDS |
| CCAGAATTGGAGAAACATTT+TGG | 0.146550 | 2.2:-54555932 | MS.gene65287:CDS |
| CCAAAATGTTTCTCCAATTC+TGG | 0.169992 | 2.2:+54555932 | None:intergenic |
| GGCTTCTCCTCTCCTTCTAT+TGG | 0.189245 | 2.2:-54558940 | MS.gene65287:CDS |
| TCTCCAATTCTGGACTCTTT+TGG | 0.221583 | 2.2:+54555942 | None:intergenic |
| GTCCAGTTGGAGGTTCTTCT+TGG | 0.259905 | 2.2:-54556519 | MS.gene65287:CDS |
| AGGCTTTGAAGGTCGGAATT+TGG | 0.262776 | 2.2:+54556643 | None:intergenic |
| TTACCAACATGGCTAAAATA+AGG | 0.277500 | 2.2:+54556274 | None:intergenic |
| TATACCAAGTATCCAATAAA+AGG | 0.292777 | 2.2:+54556328 | None:intergenic |
| GTTCTTTCAGAAATGATGTT+AGG | 0.293966 | 2.2:-54556363 | MS.gene65287:CDS |
| GCTTCTCCTCTCCTTCTATT+GGG | 0.305499 | 2.2:-54558939 | MS.gene65287:CDS |
| TCAGGCATTGAACTCATTCT+TGG | 0.314744 | 2.2:-54556670 | MS.gene65287:CDS |
| AAGAAGTACCCATTTGGATT+TGG | 0.328985 | 2.2:-54555887 | MS.gene65287:CDS |
| ACATAGCATCAAACAAGTTT+TGG | 0.348179 | 2.2:+54556176 | None:intergenic |
| TTTCTGAAAGAACCTTTAGA+TGG | 0.356274 | 2.2:+54556373 | None:intergenic |
| AACCAATCCCAGTGTTATCT+AGG | 0.358223 | 2.2:+54556134 | None:intergenic |
| CTAAACGCATTAAGAAATTC+AGG | 0.364769 | 2.2:-54556688 | MS.gene65287:CDS |
| TTTCACTTCACCGGGTGTTA+TGG | 0.366594 | 2.2:-54556221 | MS.gene65287:CDS |
| GCGTTTAGAGCAGCTTGATT+AGG | 0.366865 | 2.2:+54556703 | None:intergenic |
| AGATCTATAACTTCGTTTGC+TGG | 0.370734 | 2.2:+54556766 | None:intergenic |
| GGATTTGGTGGGGAAAGAAA+TGG | 0.371102 | 2.2:-54555872 | MS.gene65287:CDS |
| ATTGTATCAGATGCTCAAAT+AGG | 0.378846 | 2.2:-54556823 | MS.gene65287:intron |
| GATTTGGTGGGGAAAGAAAT+GGG | 0.380181 | 2.2:-54555871 | MS.gene65287:CDS |
| TTGTGAACAATCCCAATAGA+AGG | 0.380689 | 2.2:+54558928 | None:intergenic |
| AAGGTACTCCACGAAGGCCT+TGG | 0.400880 | 2.2:-54556003 | MS.gene65287:CDS |
| AGTTGGTGGCTAGGCTTTGA+AGG | 0.409122 | 2.2:+54556632 | None:intergenic |
| AAACAAAAGAAGTACCCATT+TGG | 0.414004 | 2.2:-54555893 | MS.gene65287:CDS |
| GAGGGAATGAGTTTCCAATA+AGG | 0.416360 | 2.2:+54556395 | None:intergenic |
| GAACCAAAAGAGTCCAGAAT+TGG | 0.421071 | 2.2:-54555945 | MS.gene65287:CDS |
| CTCTGATAATGCACGTCAAT+GGG | 0.427457 | 2.2:-54556611 | MS.gene65287:CDS |
| AAAGAAATGTACTAAACTTC+TGG | 0.430566 | 2.2:-54556585 | MS.gene65287:CDS |
| AGTATCCAATAAAAGGATCT+AGG | 0.434145 | 2.2:+54556335 | None:intergenic |
| CTTTCCCCACCAAATCCAAA+TGG | 0.434776 | 2.2:+54555878 | None:intergenic |
| CTTCTTTCTTTGCTCCAACC+AGG | 0.443871 | 2.2:-54558974 | MS.gene65287:CDS |
| ATGGTACAAGACGGTCCAAA+TGG | 0.444159 | 2.2:-54556202 | MS.gene65287:CDS |
| AGGAGTATGTTATGGTATGA+TGG | 0.444271 | 2.2:-54556803 | MS.gene65287:CDS |
| ACTCTGATAATGCACGTCAA+TGG | 0.445056 | 2.2:-54556612 | MS.gene65287:CDS |
| TCCAACCAGGAGGTTCTCCT+TGG | 0.446401 | 2.2:-54558961 | MS.gene65287:CDS |
| TTCTTTCAGAAATGATGTTA+GGG | 0.448198 | 2.2:-54556362 | MS.gene65287:CDS |
| ATTGGATACTTGGTATATGC+AGG | 0.452948 | 2.2:-54556322 | MS.gene65287:CDS |
| GTTTGATGCTATGTTGGATT+CGG | 0.455477 | 2.2:-54556167 | MS.gene65287:CDS |
| TTGATTCGTCATGTTGGTAA+AGG | 0.455676 | 2.2:-54556022 | MS.gene65287:CDS |
| TAGATAACACTGGGATTGGT+TGG | 0.456162 | 2.2:-54556132 | MS.gene65287:CDS |
| TACCAACATGGCTAAAATAA+GGG | 0.471112 | 2.2:+54556275 | None:intergenic |
| AAGTACCCATTTGGATTTGG+TGG | 0.473093 | 2.2:-54555884 | MS.gene65287:CDS |
| AAATCTTCATGATCAAATCA+AGG | 0.476242 | 2.2:-54556440 | MS.gene65287:CDS |
| AGCCAAGAAGAACCTCCAAC+TGG | 0.478746 | 2.2:+54556517 | None:intergenic |
| AACTCATTCCCTCCATCTAA+AGG | 0.483297 | 2.2:-54556385 | MS.gene65287:CDS |
| AGTGGTTGGCCCTCTGATGG+AGG | 0.485939 | 2.2:-54556088 | MS.gene65287:CDS |
| AAACTTGTTTGATGCTATGT+TGG | 0.487153 | 2.2:-54556173 | MS.gene65287:CDS |
| TCTGTTGCCCAAGGCCTTCG+TGG | 0.497067 | 2.2:+54555995 | None:intergenic |
| CCAAACCTGCTGTGGGAATG+AGG | 0.498024 | 2.2:+54558901 | None:intergenic |
| AGGTACTCCACGAAGGCCTT+GGG | 0.499202 | 2.2:-54556002 | MS.gene65287:CDS |
| GGGTAAACATTGACAAGTAA+AGG | 0.501897 | 2.2:+54556295 | None:intergenic |
| GCTCAAATAGGAGTATGTTA+TGG | 0.506502 | 2.2:-54556811 | MS.gene65287:CDS |
| GAGAGTGGTTGGCCCTCTGA+TGG | 0.506895 | 2.2:-54556091 | MS.gene65287:CDS |
| GTGGTTGGCCCTCTGATGGA+GGG | 0.509372 | 2.2:-54556087 | MS.gene65287:CDS |
| GCCCTAGATAACACTGGGAT+TGG | 0.514217 | 2.2:-54556136 | MS.gene65287:CDS |
| AGGGAATGAGTTTCCAATAA+GGG | 0.515316 | 2.2:+54556396 | None:intergenic |
| TGAAAGAACCTTTAGATGGA+GGG | 0.516289 | 2.2:+54556377 | None:intergenic |
| CTGAAAGAACCTTTAGATGG+AGG | 0.520278 | 2.2:+54556376 | None:intergenic |
| TTTCCCCACCAAATCCAAAT+GGG | 0.522115 | 2.2:+54555879 | None:intergenic |
| AGATAACACTGGGATTGGTT+GGG | 0.525369 | 2.2:-54556131 | MS.gene65287:CDS |
| GGAGTATGTTATGGTATGAT+GGG | 0.531605 | 2.2:-54556802 | MS.gene65287:CDS |
| CATTATCAGAGTTGGTGGCT+AGG | 0.533624 | 2.2:+54556623 | None:intergenic |
| AGTACCCATTTGGATTTGGT+GGG | 0.536863 | 2.2:-54555883 | MS.gene65287:CDS |
| ACGTGCATTATCAGAGTTGG+TGG | 0.536916 | 2.2:+54556618 | None:intergenic |
| AAAATCAAGTATATTGCAGT+TGG | 0.537070 | 2.2:-54556553 | MS.gene65287:CDS |
| GGTGAAGTGAAAAGAGCATA+AGG | 0.538337 | 2.2:+54556232 | None:intergenic |
| GATAGAGACCAAACCTGCTG+TGG | 0.547425 | 2.2:+54558893 | None:intergenic |
| GGTGGCTAGGCTTTGAAGGT+CGG | 0.549115 | 2.2:+54556636 | None:intergenic |
| TTGACGTGCATTATCAGAGT+TGG | 0.556118 | 2.2:+54556615 | None:intergenic |
| GCCAAGGAGAACCTCCTGGT+TGG | 0.558627 | 2.2:+54558960 | None:intergenic |
| CATGACGAATCAAATTATCA+AGG | 0.559453 | 2.2:+54556032 | None:intergenic |
| TAGAAGGAGAGGAGAAGCCA+AGG | 0.559699 | 2.2:+54558944 | None:intergenic |
| GATAATTTGATTCGTCATGT+TGG | 0.559706 | 2.2:-54556028 | MS.gene65287:CDS |
| TGGTACAAGACGGTCCAAAT+GGG | 0.563902 | 2.2:-54556201 | MS.gene65287:CDS |
| CTGGTTGGAGCAAAGAAAGA+AGG | 0.564398 | 2.2:+54558975 | None:intergenic |
| AGAAATGGGGAAATTGTCAA+TGG | 0.564590 | 2.2:-54555857 | MS.gene65287:CDS |
| ACCAATCCCAGTGTTATCTA+GGG | 0.567725 | 2.2:+54556135 | None:intergenic |
| ATAAACCTCATTCCCACAGC+AGG | 0.569800 | 2.2:-54558906 | MS.gene65287:intron |
| ATATAAGTTTCTGTTGCCCA+AGG | 0.574099 | 2.2:+54555986 | None:intergenic |
| GTACCCATTTGGATTTGGTG+GGG | 0.578076 | 2.2:-54555882 | MS.gene65287:CDS |
| AGTAGCCGCCCCTCCATCAG+AGG | 0.578903 | 2.2:+54556078 | None:intergenic |
| ATTTGGTGGGGAAAGAAATG+GGG | 0.581919 | 2.2:-54555870 | MS.gene65287:CDS |
| AACAATCCCAATAGAAGGAG+AGG | 0.583975 | 2.2:+54558933 | None:intergenic |
| CCGTCTTGTACCATAACACC+CGG | 0.586536 | 2.2:+54556211 | None:intergenic |
| CTTTCTTTGCTCCAACCAGG+AGG | 0.587925 | 2.2:-54558971 | MS.gene65287:CDS |
| TGGTTGGCCCTCTGATGGAG+GGG | 0.589912 | 2.2:-54556086 | MS.gene65287:CDS |
| CATGCAGCCCTAGATAACAC+TGG | 0.595342 | 2.2:-54556142 | MS.gene65287:CDS |
| GGTAATGAAGTGAGTCCAGT+TGG | 0.595633 | 2.2:-54556532 | MS.gene65287:CDS |
| TGTCGCGCGGGTTACCAACA+TGG | 0.597136 | 2.2:+54556263 | None:intergenic |
| AATGAAGTGAGTCCAGTTGG+AGG | 0.598323 | 2.2:-54556529 | MS.gene65287:CDS |
| AGAAGCCAAGGAGAACCTCC+TGG | 0.598809 | 2.2:+54558956 | None:intergenic |
| AACGTTGTTGTATCTGAGAG+TGG | 0.614257 | 2.2:-54556106 | MS.gene65287:CDS |
| TTGGCCCTCTGATGGAGGGG+CGG | 0.614879 | 2.2:-54556083 | MS.gene65287:CDS |
| GTAGCCGCCCCTCCATCAGA+GGG | 0.615453 | 2.2:+54556079 | None:intergenic |
| TCTATAACTTCGTTTGCTGG+TGG | 0.622975 | 2.2:+54556769 | None:intergenic |
| TTGTTGTATCTGAGAGTGGT+TGG | 0.629103 | 2.2:-54556102 | MS.gene65287:CDS |
| ATGCAGCCCTAGATAACACT+GGG | 0.632794 | 2.2:-54556141 | MS.gene65287:CDS |
| AAGGAAGAGATATGTCGCGC+GGG | 0.641550 | 2.2:+54556251 | None:intergenic |
| ATAGAGACCAAACCTGCTGT+GGG | 0.642306 | 2.2:+54558894 | None:intergenic |
| TAAGGAAGAGATATGTCGCG+CGG | 0.673813 | 2.2:+54556250 | None:intergenic |
| AATAAGGGTCATGTCAATAG+CGG | 0.686579 | 2.2:+54556411 | None:intergenic |
| CCGGGTGTTATGGTACAAGA+CGG | 0.687212 | 2.2:-54556211 | MS.gene65287:CDS |
| TTGGTAAAGGTACTCCACGA+AGG | 0.718049 | 2.2:-54556009 | MS.gene65287:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTAATTTTTTTATTAATAA+CGG | + | chr2.2:54557306-54557325 | None:intergenic | 0.0% |
| !! | ATGACATAATAAAAAAAATA+AGG | - | chr2.2:54556060-54556079 | MS.gene65287:CDS | 10.0% |
| !!! | TTTTATAATAAAAATGGTAT+AGG | + | chr2.2:54557870-54557889 | None:intergenic | 10.0% |
| !! | TATTAATGGAGTATAATTTA+GGG | + | chr2.2:54557796-54557815 | None:intergenic | 15.0% |
| !!! | ACTTATCATTAATCTTTTTT+TGG | + | chr2.2:54556312-54556331 | None:intergenic | 15.0% |
| !!! | AGTGATTTTTTTTTAAAAGA+AGG | - | chr2.2:54557200-54557219 | MS.gene65287:intron | 15.0% |
| !!! | ATTTTTATTGGTGTTAAATT+AGG | + | chr2.2:54557457-54557476 | None:intergenic | 15.0% |
| !!! | TATAGCTTGATATATATTTT+GGG | + | chr2.2:54558327-54558346 | None:intergenic | 15.0% |
| !!! | TGCATCTATTAATTTTTTTT+AGG | - | chr2.2:54557640-54557659 | MS.gene65287:intron | 15.0% |
| !!! | TTATAGCTTGATATATATTT+TGG | + | chr2.2:54558328-54558347 | None:intergenic | 15.0% |
| !! | ATATAACATATACAATGACA+TGG | - | chr2.2:54557257-54557276 | MS.gene65287:intron | 20.0% |
| !! | GCTTAATATGATTCAATTAT+GGG | - | chr2.2:54556637-54556656 | MS.gene65287:CDS | 20.0% |
| !! | GTATTAATGGAGTATAATTT+AGG | + | chr2.2:54557797-54557816 | None:intergenic | 20.0% |
| !! | TAAAATCTTTACACATAACA+TGG | + | chr2.2:54556663-54556682 | None:intergenic | 20.0% |
| !! | TATAAAGTTATCCGAAAAAA+AGG | + | chr2.2:54557819-54557838 | None:intergenic | 20.0% |
| !! | TGATGATATAAGTTATTGTT+GGG | - | chr2.2:54557616-54557635 | MS.gene65287:intron | 20.0% |
| !! | TGCTTAATATGATTCAATTA+TGG | - | chr2.2:54556636-54556655 | MS.gene65287:CDS | 20.0% |
| !!! | ACTTAATTTGAGTGTTTAAA+TGG | + | chr2.2:54557742-54557761 | None:intergenic | 20.0% |
| !!! | ATGAAGATGTCTATTTTTAT+TGG | + | chr2.2:54557469-54557488 | None:intergenic | 20.0% |
| !!! | ATTTTGTTTTTAATAGTGTG+AGG | - | chr2.2:54556333-54556352 | MS.gene65287:CDS | 20.0% |
| !!! | CTTAATTTGAGTGTTTAAAT+GGG | + | chr2.2:54557741-54557760 | None:intergenic | 20.0% |
| !!! | TTGATGATATAAGTTATTGT+TGG | - | chr2.2:54557615-54557634 | MS.gene65287:intron | 20.0% |
| !!! | TTTTTTTTTAAAAGAAGGTG+TGG | - | chr2.2:54557205-54557224 | MS.gene65287:intron | 20.0% |
| ! | AAAAAAAGCCGTATTATAGA+TGG | + | chr2.2:54557433-54557452 | None:intergenic | 25.0% |
| ! | AAAATCAAGTATATTGCAGT+TGG | - | chr2.2:54558242-54558261 | MS.gene65287:intron | 25.0% |
| ! | AAAGAAATGTACTAAACTTC+TGG | - | chr2.2:54558210-54558229 | MS.gene65287:intron | 25.0% |
| ! | AAATCTTCATGATCAAATCA+AGG | - | chr2.2:54558355-54558374 | MS.gene65287:intron | 25.0% |
| ! | AACAATGCATAAAATATGCA+AGG | - | chr2.2:54556261-54556280 | MS.gene65287:CDS | 25.0% |
| ! | AATTTGGGTGTTTATAAGAT+TGG | - | chr2.2:54557501-54557520 | MS.gene65287:intron | 25.0% |
| ! | ACAAGTAAAGATGATAGAAA+CGG | + | chr2.2:54557541-54557560 | None:intergenic | 25.0% |
| ! | AGAAAAAAGTTTAAGTAAGC+CGG | + | chr2.2:54556442-54556461 | None:intergenic | 25.0% |
| ! | TAAAACCTAGTTCAATTTAC+AGG | - | chr2.2:54557029-54557048 | MS.gene65287:intron | 25.0% |
| ! | TATACCAAGTATCCAATAAA+AGG | + | chr2.2:54558470-54558489 | None:intergenic | 25.0% |
| ! | TTCTTTCAGAAATGATGTTA+GGG | - | chr2.2:54558433-54558452 | MS.gene65287:intron | 25.0% |
| ! | TTTCTATCATCTTTACTTGT+AGG | - | chr2.2:54557541-54557560 | MS.gene65287:intron | 25.0% |
| !!! | ATATACTTGATTTTGACACT+AGG | + | chr2.2:54558236-54558255 | None:intergenic | 25.0% |
| !!! | ATCCGAAAAAAAGGTATTAA+TGG | + | chr2.2:54557810-54557829 | None:intergenic | 25.0% |
| !!! | CATTAATCTTTTTTTGGTAG+TGG | + | chr2.2:54556306-54556325 | None:intergenic | 25.0% |
| !!! | CTCCATTAATACCTTTTTTT+CGG | - | chr2.2:54557805-54557824 | MS.gene65287:intron | 25.0% |
| !!! | TATAAGATTGGTGCTTTTAA+TGG | - | chr2.2:54557513-54557532 | MS.gene65287:intron | 25.0% |
| AGTATCCAATAAAAGGATCT+AGG | + | chr2.2:54558463-54558482 | None:intergenic | 30.0% | |
| ATAATGCACAATCCATTAAG+AGG | - | chr2.2:54557168-54557187 | MS.gene65287:intron | 30.0% | |
| ATTGTATCAGATGCTCAAAT+AGG | - | chr2.2:54557972-54557991 | MS.gene65287:intron | 30.0% | |
| CATGACGAATCAAATTATCA+AGG | + | chr2.2:54558766-54558785 | None:intergenic | 30.0% | |
| CTAAACGCATTAAGAAATTC+AGG | - | chr2.2:54558107-54558126 | MS.gene65287:intron | 30.0% | |
| CTCTATCTTCTATATAGAGA+TGG | - | chr2.2:54555918-54555937 | MS.gene65287:CDS | 30.0% | |
| GACATTTATTTCGAAACGAA+GGG | + | chr2.2:54556549-54556568 | None:intergenic | 30.0% | |
| GAGTTAGACCATCTATAATA+CGG | - | chr2.2:54557422-54557441 | MS.gene65287:intron | 30.0% | |
| GTTCTTTCAGAAATGATGTT+AGG | - | chr2.2:54558432-54558451 | MS.gene65287:intron | 30.0% | |
| TACCAACATGGCTAAAATAA+GGG | + | chr2.2:54558523-54558542 | None:intergenic | 30.0% | |
| TTACCAACATGGCTAAAATA+AGG | + | chr2.2:54558524-54558543 | None:intergenic | 30.0% | |
| ! | AAACTTGTTTGATGCTATGT+TGG | - | chr2.2:54558622-54558641 | MS.gene65287:intron | 30.0% |
| ! | ACATAGCATCAAACAAGTTT+TGG | + | chr2.2:54558622-54558641 | None:intergenic | 30.0% |
| ! | AGATCCTTTTATTGGATACT+TGG | - | chr2.2:54558463-54558482 | MS.gene65287:intron | 30.0% |
| ! | GATAATTTGATTCGTCATGT+TGG | - | chr2.2:54558767-54558786 | MS.gene65287:intron | 30.0% |
| ! | TTTCTGAAAGAACCTTTAGA+TGG | + | chr2.2:54558425-54558444 | None:intergenic | 30.0% |
| !! | AAACAAAAGAAGTACCCATT+TGG | - | chr2.2:54558902-54558921 | MS.gene65287:intron | 30.0% |
| !! | AAGGCTCAAAAAGTATTTAC+AGG | + | chr2.2:54556387-54556406 | None:intergenic | 30.0% |
| !! | AGCTTGATATATATTTTGGG+TGG | + | chr2.2:54558324-54558343 | None:intergenic | 30.0% |
| !! | CGTTTGTTATAATAGCAAGT+TGG | - | chr2.2:54556568-54556587 | MS.gene65287:CDS | 30.0% |
| !! | GGGTACTTCTTTTGTTTATT+AGG | + | chr2.2:54558899-54558918 | None:intergenic | 30.0% |
| !! | TGTTATAATAGCAAGTTGGT+CGG | - | chr2.2:54556572-54556591 | MS.gene65287:CDS | 30.0% |
| !!! | AATCTTTTTTTGGTAGTGGT+CGG | + | chr2.2:54556302-54556321 | None:intergenic | 30.0% |
| AAATCCTCAAGTATGGCATA+TGG | - | chr2.2:54556807-54556826 | MS.gene65287:CDS | 35.0% | |
| AATAAGGGTCATGTCAATAG+CGG | + | chr2.2:54558387-54558406 | None:intergenic | 35.0% | |
| ACAAAATAAGTGACATGTGC+CGG | - | chr2.2:54557710-54557729 | MS.gene65287:intron | 35.0% | |
| ACACACCTGTAAATTGAACT+AGG | + | chr2.2:54557037-54557056 | None:intergenic | 35.0% | |
| AGAAATGGGGAAATTGTCAA+TGG | - | chr2.2:54558938-54558957 | MS.gene65287:CDS | 35.0% | |
| AGATCTATAACTTCGTTTGC+TGG | + | chr2.2:54558032-54558051 | None:intergenic | 35.0% | |
| AGGGAATGAGTTTCCAATAA+GGG | + | chr2.2:54558402-54558421 | None:intergenic | 35.0% | |
| ATATAAGTTTCTGTTGCCCA+AGG | + | chr2.2:54558812-54558831 | None:intergenic | 35.0% | |
| ATTGGATACTTGGTATATGC+AGG | - | chr2.2:54558473-54558492 | MS.gene65287:intron | 35.0% | |
| CATCGTGACAACAACAATTT+GGG | - | chr2.2:54557486-54557505 | MS.gene65287:intron | 35.0% | |
| CCAAAATGTTTCTCCAATTC+TGG | + | chr2.2:54558866-54558885 | None:intergenic | 35.0% | |
| CGACATTTATTTCGAAACGA+AGG | + | chr2.2:54556550-54556569 | None:intergenic | 35.0% | |
| GGAGTATGTTATGGTATGAT+GGG | - | chr2.2:54557993-54558012 | MS.gene65287:intron | 35.0% | |
| GGGTAAACATTGACAAGTAA+AGG | + | chr2.2:54558503-54558522 | None:intergenic | 35.0% | |
| GTTTGATGCTATGTTGGATT+CGG | - | chr2.2:54558628-54558647 | MS.gene65287:intron | 35.0% | |
| TCATCGTGACAACAACAATT+TGG | - | chr2.2:54557485-54557504 | MS.gene65287:intron | 35.0% | |
| TGAAAGAACCTTTAGATGGA+GGG | + | chr2.2:54558421-54558440 | None:intergenic | 35.0% | |
| TGCATAAAATATGCAAGGTC+CGG | - | chr2.2:54556266-54556285 | MS.gene65287:CDS | 35.0% | |
| TGTACGTCTCTCTATAATTG+AGG | + | chr2.2:54557341-54557360 | None:intergenic | 35.0% | |
| TTGTGAACAATCCCAATAGA+AGG | + | chr2.2:54555870-54555889 | None:intergenic | 35.0% | |
| ! | AGGAGTATGTTATGGTATGA+TGG | - | chr2.2:54557992-54558011 | MS.gene65287:intron | 35.0% |
| ! | CCAGAATTGGAGAAACATTT+TGG | - | chr2.2:54558863-54558882 | MS.gene65287:intron | 35.0% |
| ! | GCATACCTAGATCCTTTTAT+TGG | - | chr2.2:54558455-54558474 | MS.gene65287:intron | 35.0% |
| ! | GCTCAAATAGGAGTATGTTA+TGG | - | chr2.2:54557984-54558003 | MS.gene65287:intron | 35.0% |
| ! | TTATGCTCTTTTCACTTCAC+CGG | - | chr2.2:54558565-54558584 | MS.gene65287:intron | 35.0% |
| ! | TTGATTCGTCATGTTGGTAA+AGG | - | chr2.2:54558773-54558792 | MS.gene65287:intron | 35.0% |
| !! | AACAAGTTTTGGTACCCATT+TGG | + | chr2.2:54558611-54558630 | None:intergenic | 35.0% |
| !! | AAGAAGTACCCATTTGGATT+TGG | - | chr2.2:54558908-54558927 | MS.gene65287:CDS | 35.0% |
| !! | GTTATAATAGCAAGTTGGTC+GGG | - | chr2.2:54556573-54556592 | MS.gene65287:CDS | 35.0% |
| !! | TGATATATATTTTGGGTGGC+AGG | + | chr2.2:54558320-54558339 | None:intergenic | 35.0% |
| !! | TTATAATAGCAAGTTGGTCG+GGG | - | chr2.2:54556574-54556593 | MS.gene65287:CDS | 35.0% |
| !!! | ATCTTTTTTTGGTAGTGGTC+GGG | + | chr2.2:54556301-54556320 | None:intergenic | 35.0% |
| !!! | TACCCTTATTTTAGCCATGT+TGG | - | chr2.2:54558518-54558537 | MS.gene65287:intron | 35.0% |
| AACAATCCCAATAGAAGGAG+AGG | + | chr2.2:54555865-54555884 | None:intergenic | 40.0% | |
| AACCAATCCCAGTGTTATCT+AGG | + | chr2.2:54558664-54558683 | None:intergenic | 40.0% | |
| AACGTTGTTGTATCTGAGAG+TGG | - | chr2.2:54558689-54558708 | MS.gene65287:intron | 40.0% | |
| AACTCATTCCCTCCATCTAA+AGG | - | chr2.2:54558410-54558429 | MS.gene65287:intron | 40.0% | |
| AAGTACCCATTTGGATTTGG+TGG | - | chr2.2:54558911-54558930 | MS.gene65287:CDS | 40.0% | |
| ACCAATCCCAGTGTTATCTA+GGG | + | chr2.2:54558663-54558682 | None:intergenic | 40.0% | |
| ACTAAAGCCACACCTCTTAA+TGG | + | chr2.2:54557183-54557202 | None:intergenic | 40.0% | |
| ATGCCATACTTGAGGATTTG+AGG | + | chr2.2:54556806-54556825 | None:intergenic | 40.0% | |
| CATAAAATATGCAAGGTCCG+GGG | - | chr2.2:54556268-54556287 | MS.gene65287:CDS | 40.0% | |
| CTGAAAGAACCTTTAGATGG+AGG | + | chr2.2:54558422-54558441 | None:intergenic | 40.0% | |
| GAACCAAAAGAGTCCAGAAT+TGG | - | chr2.2:54558850-54558869 | MS.gene65287:intron | 40.0% | |
| GAGAGACGTACACAAACAAT+CGG | - | chr2.2:54557349-54557368 | MS.gene65287:intron | 40.0% | |
| GAGGGAATGAGTTTCCAATA+AGG | + | chr2.2:54558403-54558422 | None:intergenic | 40.0% | |
| GCATAAAATATGCAAGGTCC+GGG | - | chr2.2:54556267-54556286 | MS.gene65287:CDS | 40.0% | |
| GCTATTGACATGACCCTTAT+TGG | - | chr2.2:54558386-54558405 | MS.gene65287:intron | 40.0% | |
| TGCCATACTTGAGGATTTGA+GGG | + | chr2.2:54556805-54556824 | None:intergenic | 40.0% | |
| TTGACGTGCATTATCAGAGT+TGG | + | chr2.2:54558183-54558202 | None:intergenic | 40.0% | |
| TTGTTGTATCTGAGAGTGGT+TGG | - | chr2.2:54558693-54558712 | MS.gene65287:intron | 40.0% | |
| TTTCCCCACCAAATCCAAAT+GGG | + | chr2.2:54558919-54558938 | None:intergenic | 40.0% | |
| TTTGAGCCTTGAGATCTGTT+TGG | - | chr2.2:54556397-54556416 | MS.gene65287:CDS | 40.0% | |
| ! | ACTCTGATAATGCACGTCAA+TGG | - | chr2.2:54558183-54558202 | MS.gene65287:intron | 40.0% |
| ! | AGTACCCATTTGGATTTGGT+GGG | - | chr2.2:54558912-54558931 | MS.gene65287:CDS | 40.0% |
| ! | ATTTGGTGGGGAAAGAAATG+GGG | - | chr2.2:54558925-54558944 | MS.gene65287:CDS | 40.0% |
| ! | CTCTGATAATGCACGTCAAT+GGG | - | chr2.2:54558184-54558203 | MS.gene65287:intron | 40.0% |
| ! | GGTGAAGTGAAAAGAGCATA+AGG | + | chr2.2:54558566-54558585 | None:intergenic | 40.0% |
| ! | TAGATAACACTGGGATTGGT+TGG | - | chr2.2:54558663-54558682 | MS.gene65287:intron | 40.0% |
| ! | TATGCTCTTTTCACTTCACC+GGG | - | chr2.2:54558566-54558585 | MS.gene65287:intron | 40.0% |
| ! | TCTATAACTTCGTTTGCTGG+TGG | + | chr2.2:54558029-54558048 | None:intergenic | 40.0% |
| ! | TCTCCAATTCTGGACTCTTT+TGG | + | chr2.2:54558856-54558875 | None:intergenic | 40.0% |
| !! | AGATAACACTGGGATTGGTT+GGG | - | chr2.2:54558664-54558683 | MS.gene65287:intron | 40.0% |
| !! | GATTTGGTGGGGAAAGAAAT+GGG | - | chr2.2:54558924-54558943 | MS.gene65287:CDS | 40.0% |
| !! | TCAGGCATTGAACTCATTCT+TGG | - | chr2.2:54558125-54558144 | MS.gene65287:intron | 40.0% |
| !!! | TCTTTTTTTGGTAGTGGTCG+GGG | + | chr2.2:54556300-54556319 | None:intergenic | 40.0% |
| AATGAAGTGAGTCCAGTTGG+AGG | - | chr2.2:54558266-54558285 | MS.gene65287:intron | 45.0% | |
| ACGTGCATTATCAGAGTTGG+TGG | + | chr2.2:54558180-54558199 | None:intergenic | 45.0% | |
| ATAAACCTCATTCCCACAGC+AGG | - | chr2.2:54555889-54555908 | MS.gene65287:CDS | 45.0% | |
| ATAGAGACCAAACCTGCTGT+GGG | + | chr2.2:54555904-54555923 | None:intergenic | 45.0% | |
| ATGCAGCCCTAGATAACACT+GGG | - | chr2.2:54558654-54558673 | MS.gene65287:intron | 45.0% | |
| ATGGTACAAGACGGTCCAAA+TGG | - | chr2.2:54558593-54558612 | MS.gene65287:intron | 45.0% | |
| CCAGAACCAAACAGATCTCA+AGG | + | chr2.2:54556406-54556425 | None:intergenic | 45.0% | |
| CCTCAAAAGCTTAGCTCAGT+TGG | - | chr2.2:54556235-54556254 | MS.gene65287:CDS | 45.0% | |
| CTGGTTGGAGCAAAGAAAGA+AGG | + | chr2.2:54555823-54555842 | None:intergenic | 45.0% | |
| CTTCTTTCTTTGCTCCAACC+AGG | - | chr2.2:54555821-54555840 | MS.gene65287:CDS | 45.0% | |
| CTTTCCCCACCAAATCCAAA+TGG | + | chr2.2:54558920-54558939 | None:intergenic | 45.0% | |
| GCACAATCCATTAAGAGGTG+TGG | - | chr2.2:54557173-54557192 | MS.gene65287:intron | 45.0% | |
| GCCATACTTGAGGATTTGAG+GGG | + | chr2.2:54556804-54556823 | None:intergenic | 45.0% | |
| GCTTCTCCTCTCCTTCTATT+GGG | - | chr2.2:54555856-54555875 | MS.gene65287:CDS | 45.0% | |
| GGTAATGAAGTGAGTCCAGT+TGG | - | chr2.2:54558263-54558282 | MS.gene65287:intron | 45.0% | |
| TAAGGAAGAGATATGTCGCG+CGG | + | chr2.2:54558548-54558567 | None:intergenic | 45.0% | |
| TCAGCCATATGCCATACTTG+AGG | + | chr2.2:54556814-54556833 | None:intergenic | 45.0% | |
| TCCCCTCAAATCCTCAAGTA+TGG | - | chr2.2:54556800-54556819 | MS.gene65287:CDS | 45.0% | |
| TGGTACAAGACGGTCCAAAT+GGG | - | chr2.2:54558594-54558613 | MS.gene65287:intron | 45.0% | |
| TTTCACTTCACCGGGTGTTA+TGG | - | chr2.2:54558574-54558593 | MS.gene65287:intron | 45.0% | |
| ! | CCAACTGAGCTAAGCTTTTG+AGG | + | chr2.2:54556238-54556257 | None:intergenic | 45.0% |
| ! | CCTTGAGATCTGTTTGGTTC+TGG | - | chr2.2:54556403-54556422 | MS.gene65287:CDS | 45.0% |
| ! | GCGTTTAGAGCAGCTTGATT+AGG | + | chr2.2:54558095-54558114 | None:intergenic | 45.0% |
| !! | AGGCTTTGAAGGTCGGAATT+TGG | + | chr2.2:54558155-54558174 | None:intergenic | 45.0% |
| !! | CATTATCAGAGTTGGTGGCT+AGG | + | chr2.2:54558175-54558194 | None:intergenic | 45.0% |
| !! | GGATTTGGTGGGGAAAGAAA+TGG | - | chr2.2:54558923-54558942 | MS.gene65287:CDS | 45.0% |
| !! | GTACCCATTTGGATTTGGTG+GGG | - | chr2.2:54558913-54558932 | MS.gene65287:CDS | 45.0% |
| !! | TGTTTGGTTCTGGTGAATCG+CGG | - | chr2.2:54556413-54556432 | MS.gene65287:CDS | 45.0% |
| !! | TTGGTAAAGGTACTCCACGA+AGG | - | chr2.2:54558786-54558805 | MS.gene65287:intron | 45.0% |
| !!! | TTTTTCTTTTATAATAAAAA+TGG | + | chr2.2:54557876-54557895 | None:intergenic | 5.0% |
| !!! | TTTTTCTTTTATAATTAAAA+TGG | + | chr2.2:54557842-54557861 | None:intergenic | 5.0% |
| AAGGAAGAGATATGTCGCGC+GGG | + | chr2.2:54558547-54558566 | None:intergenic | 50.0% | |
| AGCCAAGAAGAACCTCCAAC+TGG | + | chr2.2:54558281-54558300 | None:intergenic | 50.0% | |
| AGTGTTTAAATGGGCGACGC+CGG | + | chr2.2:54557732-54557751 | None:intergenic | 50.0% | |
| CATGCAGCCCTAGATAACAC+TGG | - | chr2.2:54558653-54558672 | MS.gene65287:intron | 50.0% | |
| CCGTCTTGTACCATAACACC+CGG | + | chr2.2:54558587-54558606 | None:intergenic | 50.0% | |
| CTTTCTTTGCTCCAACCAGG+AGG | - | chr2.2:54555824-54555843 | MS.gene65287:CDS | 50.0% | |
| GATAGAGACCAAACCTGCTG+TGG | + | chr2.2:54555905-54555924 | None:intergenic | 50.0% | |
| GCCCTAGATAACACTGGGAT+TGG | - | chr2.2:54558659-54558678 | MS.gene65287:intron | 50.0% | |
| GGCTTCTCCTCTCCTTCTAT+TGG | - | chr2.2:54555855-54555874 | MS.gene65287:CDS | 50.0% | |
| GTCCAGTTGGAGGTTCTTCT+TGG | - | chr2.2:54558276-54558295 | MS.gene65287:intron | 50.0% | |
| TAGAAGGAGAGGAGAAGCCA+AGG | + | chr2.2:54555854-54555873 | None:intergenic | 50.0% | |
| TTCTGGTGAATCGCGGAAAC+CGG | - | chr2.2:54556420-54556439 | MS.gene65287:CDS | 50.0% | |
| ! | CCGGGTGTTATGGTACAAGA+CGG | - | chr2.2:54558584-54558603 | MS.gene65287:intron | 50.0% |
| !! | AGTTGGTGGCTAGGCTTTGA+AGG | + | chr2.2:54558166-54558185 | None:intergenic | 50.0% |
| AGAAGCCAAGGAGAACCTCC+TGG | + | chr2.2:54555842-54555861 | None:intergenic | 55.0% | |
| AGGTACTCCACGAAGGCCTT+GGG | - | chr2.2:54558793-54558812 | MS.gene65287:intron | 55.0% | |
| AGTGGTCGGGGTTTAAACCC+CGG | + | chr2.2:54556288-54556307 | None:intergenic | 55.0% | |
| CCAAACCTGCTGTGGGAATG+AGG | + | chr2.2:54555897-54555916 | None:intergenic | 55.0% | |
| CCTCATTCCCACAGCAGGTT+TGG | - | chr2.2:54555894-54555913 | MS.gene65287:CDS | 55.0% | |
| TCCAACCAGGAGGTTCTCCT+TGG | - | chr2.2:54555834-54555853 | MS.gene65287:CDS | 55.0% | |
| ! | AAGGTACTCCACGAAGGCCT+TGG | - | chr2.2:54558792-54558811 | MS.gene65287:intron | 55.0% |
| !! | GGTGGCTAGGCTTTGAAGGT+CGG | + | chr2.2:54558162-54558181 | None:intergenic | 55.0% |
| GCCAAGGAGAACCTCCTGGT+TGG | + | chr2.2:54555838-54555857 | None:intergenic | 60.0% | |
| TCTGTTGCCCAAGGCCTTCG+TGG | + | chr2.2:54558803-54558822 | None:intergenic | 60.0% | |
| ! | AGTGGTTGGCCCTCTGATGG+AGG | - | chr2.2:54558707-54558726 | MS.gene65287:intron | 60.0% |
| ! | GAGAGTGGTTGGCCCTCTGA+TGG | - | chr2.2:54558704-54558723 | MS.gene65287:intron | 60.0% |
| ! | GTGGTTGGCCCTCTGATGGA+GGG | - | chr2.2:54558708-54558727 | MS.gene65287:intron | 60.0% |
| ! | TGGTTGGCCCTCTGATGGAG+GGG | - | chr2.2:54558709-54558728 | MS.gene65287:intron | 60.0% |
| ! | TGTCGCGCGGGTTACCAACA+TGG | + | chr2.2:54558535-54558554 | None:intergenic | 60.0% |
| AGTAGCCGCCCCTCCATCAG+AGG | + | chr2.2:54558720-54558739 | None:intergenic | 65.0% | |
| GTAGCCGCCCCTCCATCAGA+GGG | + | chr2.2:54558719-54558738 | None:intergenic | 65.0% | |
| TTGGCCCTCTGATGGAGGGG+CGG | - | chr2.2:54558712-54558731 | MS.gene65287:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.2 | gene | 54555817 | 54559000 | 54555817 | ID=MS.gene65287 |
| chr2.2 | mRNA | 54555817 | 54559000 | 54555817 | ID=MS.gene65287.t1;Parent=MS.gene65287 |
| chr2.2 | exon | 54558907 | 54559000 | 54558907 | ID=MS.gene65287.t1.exon1;Parent=MS.gene65287.t1 |
| chr2.2 | CDS | 54558907 | 54559000 | 54558907 | ID=cds.MS.gene65287.t1;Parent=MS.gene65287.t1 |
| chr2.2 | exon | 54555817 | 54556835 | 54555817 | ID=MS.gene65287.t1.exon2;Parent=MS.gene65287.t1 |
| chr2.2 | CDS | 54555817 | 54556835 | 54555817 | ID=cds.MS.gene65287.t1;Parent=MS.gene65287.t1 |
| Gene Sequence |
| Protein sequence |
