Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67080.t1 | XP_003589256.1 | 100 | 148 | 0 | 0 | 1 | 148 | 1 | 148 | 6.70E-82 | 313.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67080.t1 | P35135 | 93.2 | 147 | 10 | 0 | 1 | 147 | 1 | 147 | 1.6e-79 | 296.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67080.t1 | G7I4J0 | 100.0 | 148 | 0 | 0 | 1 | 148 | 1 | 148 | 4.8e-82 | 313.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049758 | MS.gene67080 | -0.812738 | 3.65E-51 | -1.69E-46 |
| MS.gene050516 | MS.gene67080 | -0.809986 | 1.44E-50 | -1.69E-46 |
| MS.gene050762 | MS.gene67080 | -0.811123 | 8.19E-51 | -1.69E-46 |
| MS.gene050763 | MS.gene67080 | -0.813842 | 2.09E-51 | -1.69E-46 |
| MS.gene050787 | MS.gene67080 | -0.821025 | 5.03E-53 | -1.69E-46 |
| MS.gene051860 | MS.gene67080 | -0.850889 | 1.27E-60 | -1.69E-46 |
| MS.gene053836 | MS.gene67080 | -0.824565 | 7.53E-54 | -1.69E-46 |
| MS.gene054010 | MS.gene67080 | -0.803192 | 3.92E-49 | -1.69E-46 |
| MS.gene054011 | MS.gene67080 | -0.801314 | 9.54E-49 | -1.69E-46 |
| MS.gene054012 | MS.gene67080 | -0.803907 | 2.79E-49 | -1.69E-46 |
| MS.gene054379 | MS.gene67080 | -0.801107 | 1.05E-48 | -1.69E-46 |
| MS.gene054473 | MS.gene67080 | -0.830447 | 2.92E-55 | -1.69E-46 |
| MS.gene055604 | MS.gene67080 | -0.803576 | 3.26E-49 | -1.69E-46 |
| MS.gene056902 | MS.gene67080 | -0.804951 | 1.69E-49 | -1.69E-46 |
| MS.gene057469 | MS.gene67080 | -0.862343 | 5.42E-64 | -1.69E-46 |
| MS.gene057929 | MS.gene67080 | -0.812024 | 5.22E-51 | -1.69E-46 |
| MS.gene05811 | MS.gene67080 | -0.814584 | 1.43E-51 | -1.69E-46 |
| MS.gene05907 | MS.gene67080 | -0.805885 | 1.08E-49 | -1.69E-46 |
| MS.gene05984 | MS.gene67080 | -0.811523 | 6.71E-51 | -1.69E-46 |
| MS.gene060137 | MS.gene67080 | 0.835647 | 1.49E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67080.t1 | MTR_1g021150 | 100.000 | 148 | 0 | 0 | 1 | 148 | 1 | 148 | 1.54e-109 | 307 |
| MS.gene67080.t1 | MTR_7g116940 | 92.568 | 148 | 11 | 0 | 1 | 148 | 1 | 148 | 5.10e-103 | 291 |
| MS.gene67080.t1 | MTR_5g075580 | 91.892 | 148 | 12 | 0 | 1 | 148 | 1 | 148 | 5.88e-103 | 291 |
| MS.gene67080.t1 | MTR_3g062450 | 91.892 | 148 | 12 | 0 | 1 | 148 | 1 | 148 | 5.88e-103 | 291 |
| MS.gene67080.t1 | MTR_8g071040 | 90.541 | 148 | 14 | 0 | 1 | 148 | 1 | 148 | 5.01e-101 | 286 |
| MS.gene67080.t1 | MTR_7g116940 | 88.387 | 155 | 11 | 1 | 1 | 148 | 1 | 155 | 5.59e-100 | 283 |
| MS.gene67080.t1 | MTR_4g073240 | 88.514 | 148 | 17 | 0 | 1 | 148 | 1 | 148 | 6.90e-100 | 283 |
| MS.gene67080.t1 | MTR_1g021150 | 100.000 | 126 | 0 | 0 | 23 | 148 | 31 | 156 | 1.36e-92 | 265 |
| MS.gene67080.t1 | MTR_5g075580 | 92.437 | 119 | 9 | 0 | 30 | 148 | 1 | 119 | 1.59e-82 | 238 |
| MS.gene67080.t1 | MTR_4g073240 | 88.235 | 119 | 14 | 0 | 30 | 148 | 1 | 119 | 5.50e-79 | 229 |
| MS.gene67080.t1 | MTR_7g116940 | 89.908 | 109 | 11 | 0 | 1 | 109 | 1 | 109 | 7.75e-70 | 206 |
| MS.gene67080.t1 | MTR_8g085690 | 51.724 | 145 | 70 | 0 | 2 | 146 | 23 | 167 | 1.87e-55 | 171 |
| MS.gene67080.t1 | MTR_4g073240 | 86.585 | 82 | 11 | 0 | 66 | 147 | 4 | 85 | 8.80e-51 | 157 |
| MS.gene67080.t1 | MTR_2g078010 | 47.552 | 143 | 75 | 0 | 4 | 146 | 8 | 150 | 5.50e-46 | 147 |
| MS.gene67080.t1 | MTR_8g468530 | 46.575 | 146 | 73 | 1 | 2 | 142 | 21 | 166 | 2.24e-45 | 146 |
| MS.gene67080.t1 | MTR_4g108080 | 45.890 | 146 | 74 | 1 | 2 | 142 | 5 | 150 | 1.37e-44 | 143 |
| MS.gene67080.t1 | MTR_2g078010 | 43.312 | 157 | 75 | 1 | 4 | 146 | 8 | 164 | 5.16e-42 | 137 |
| MS.gene67080.t1 | MTR_3g098780 | 49.306 | 144 | 71 | 2 | 5 | 146 | 6 | 149 | 8.23e-42 | 137 |
| MS.gene67080.t1 | MTR_2g078010 | 46.715 | 137 | 73 | 0 | 4 | 140 | 8 | 144 | 8.63e-42 | 136 |
| MS.gene67080.t1 | MTR_3g098780 | 49.306 | 144 | 71 | 2 | 5 | 146 | 30 | 173 | 1.80e-41 | 137 |
| MS.gene67080.t1 | MTR_4g108080 | 48.571 | 105 | 54 | 0 | 2 | 106 | 5 | 109 | 3.74e-34 | 116 |
| MS.gene67080.t1 | MTR_1g095510 | 44.776 | 134 | 72 | 2 | 3 | 135 | 43 | 175 | 3.89e-34 | 118 |
| MS.gene67080.t1 | MTR_3g110110 | 40.816 | 147 | 83 | 3 | 5 | 147 | 7 | 153 | 4.02e-34 | 117 |
| MS.gene67080.t1 | MTR_4g076200 | 42.969 | 128 | 73 | 0 | 4 | 131 | 35 | 162 | 4.58e-33 | 115 |
| MS.gene67080.t1 | MTR_1g095510 | 46.154 | 117 | 62 | 1 | 19 | 135 | 6 | 121 | 1.41e-32 | 112 |
| MS.gene67080.t1 | MTR_1g095510 | 48.649 | 111 | 56 | 1 | 3 | 112 | 43 | 153 | 1.22e-31 | 111 |
| MS.gene67080.t1 | MTR_4g108080 | 47.706 | 109 | 52 | 1 | 39 | 142 | 42 | 150 | 1.42e-31 | 110 |
| MS.gene67080.t1 | MTR_5g009020 | 41.406 | 128 | 75 | 0 | 4 | 131 | 35 | 162 | 1.88e-31 | 110 |
| MS.gene67080.t1 | MTR_4g076200 | 45.455 | 110 | 60 | 0 | 22 | 131 | 12 | 121 | 2.93e-31 | 109 |
| MS.gene67080.t1 | MTR_4g094872 | 38.158 | 152 | 87 | 2 | 1 | 145 | 4 | 155 | 1.15e-30 | 108 |
| MS.gene67080.t1 | MTR_2g078010 | 46.535 | 101 | 54 | 0 | 4 | 104 | 8 | 108 | 4.32e-30 | 105 |
| MS.gene67080.t1 | MTR_5g016630 | 34.868 | 152 | 92 | 2 | 1 | 145 | 4 | 155 | 1.86e-27 | 100 |
| MS.gene67080.t1 | MTR_5g019480 | 36.765 | 136 | 83 | 2 | 5 | 139 | 36 | 169 | 3.56e-27 | 100 |
| MS.gene67080.t1 | MTR_5g019480 | 36.765 | 136 | 83 | 2 | 5 | 139 | 33 | 166 | 4.19e-27 | 100 |
| MS.gene67080.t1 | MTR_4g063490 | 34.815 | 135 | 74 | 2 | 15 | 135 | 18 | 152 | 1.96e-26 | 97.8 |
| MS.gene67080.t1 | MTR_5g019480 | 39.286 | 112 | 67 | 1 | 28 | 139 | 8 | 118 | 6.75e-26 | 95.5 |
| MS.gene67080.t1 | MTR_8g028920 | 34.959 | 123 | 78 | 2 | 26 | 146 | 25 | 147 | 4.14e-25 | 95.1 |
| MS.gene67080.t1 | MTR_7g087590 | 34.965 | 143 | 93 | 0 | 4 | 146 | 13 | 155 | 4.41e-25 | 97.1 |
| MS.gene67080.t1 | MTR_8g098595 | 38.182 | 110 | 66 | 2 | 39 | 146 | 23 | 132 | 2.84e-24 | 92.4 |
| MS.gene67080.t1 | MTR_2g096690 | 33.333 | 144 | 82 | 2 | 15 | 144 | 18 | 161 | 6.36e-24 | 91.7 |
| MS.gene67080.t1 | MTR_2g096690 | 38.983 | 118 | 58 | 2 | 15 | 118 | 18 | 135 | 2.16e-23 | 90.1 |
| MS.gene67080.t1 | MTR_4g106690 | 33.333 | 123 | 80 | 2 | 26 | 146 | 25 | 147 | 2.53e-23 | 90.5 |
| MS.gene67080.t1 | MTR_8g028920 | 37.736 | 106 | 64 | 2 | 43 | 146 | 3 | 108 | 1.28e-22 | 87.4 |
| MS.gene67080.t1 | MTR_8g076490 | 40.777 | 103 | 59 | 2 | 1 | 102 | 15 | 116 | 2.17e-19 | 79.7 |
| MS.gene67080.t1 | MTR_4g121960 | 34.188 | 117 | 71 | 3 | 2 | 114 | 11 | 125 | 1.58e-17 | 77.4 |
| MS.gene67080.t1 | MTR_5g021260 | 37.864 | 103 | 62 | 2 | 1 | 102 | 15 | 116 | 2.54e-17 | 74.3 |
| MS.gene67080.t1 | MTR_2g096690 | 37.374 | 99 | 48 | 2 | 15 | 99 | 18 | 116 | 2.93e-16 | 70.5 |
| MS.gene67080.t1 | MTR_8g023380 | 34.188 | 117 | 68 | 3 | 4 | 115 | 8 | 120 | 5.05e-16 | 72.4 |
| MS.gene67080.t1 | MTR_7g451800 | 36.066 | 122 | 68 | 3 | 4 | 115 | 38 | 159 | 5.53e-16 | 73.6 |
| MS.gene67080.t1 | MTR_7g047620 | 36.066 | 122 | 68 | 3 | 4 | 115 | 38 | 159 | 5.53e-16 | 73.6 |
| MS.gene67080.t1 | MTR_7g047570 | 36.066 | 122 | 68 | 3 | 4 | 115 | 38 | 159 | 1.21e-15 | 72.4 |
| MS.gene67080.t1 | MTR_7g451770 | 36.066 | 122 | 68 | 3 | 4 | 115 | 38 | 159 | 1.21e-15 | 72.4 |
| MS.gene67080.t1 | MTR_1g028540 | 73.913 | 46 | 12 | 0 | 102 | 147 | 83 | 128 | 9.36e-15 | 66.6 |
| MS.gene67080.t1 | MTR_7g023760 | 30.081 | 123 | 76 | 3 | 3 | 115 | 90 | 212 | 9.08e-14 | 67.0 |
| MS.gene67080.t1 | MTR_0274s0030 | 30.894 | 123 | 75 | 3 | 3 | 115 | 113 | 235 | 2.10e-13 | 66.2 |
| MS.gene67080.t1 | MTR_4g020620 | 32.520 | 123 | 73 | 3 | 3 | 115 | 570 | 692 | 3.45e-13 | 66.2 |
| MS.gene67080.t1 | MTR_4g020620 | 32.520 | 123 | 73 | 3 | 3 | 115 | 628 | 750 | 3.66e-13 | 65.9 |
| MS.gene67080.t1 | MTR_4g088835 | 28.667 | 150 | 94 | 4 | 4 | 143 | 672 | 818 | 4.12e-13 | 65.9 |
| MS.gene67080.t1 | MTR_4g086440 | 32.787 | 122 | 72 | 3 | 4 | 115 | 37 | 158 | 4.92e-13 | 65.1 |
| MS.gene67080.t1 | MTR_1g092465 | 30.263 | 152 | 80 | 6 | 3 | 144 | 241 | 376 | 7.45e-13 | 65.1 |
| MS.gene67080.t1 | MTR_2g013650 | 27.815 | 151 | 96 | 4 | 3 | 143 | 681 | 828 | 1.11e-12 | 64.7 |
| MS.gene67080.t1 | MTR_1g073600 | 26.606 | 109 | 66 | 2 | 33 | 140 | 25 | 120 | 1.47e-12 | 61.2 |
| MS.gene67080.t1 | MTR_2g079270 | 29.268 | 123 | 77 | 3 | 3 | 115 | 306 | 428 | 2.56e-11 | 60.5 |
| MS.gene67080.t1 | MTR_1g092460 | 27.642 | 123 | 79 | 3 | 3 | 115 | 176 | 298 | 2.81e-11 | 60.5 |
| MS.gene67080.t1 | MTR_1g092440 | 33.696 | 92 | 51 | 3 | 34 | 115 | 411 | 502 | 3.85e-11 | 60.1 |
| MS.gene67080.t1 | MTR_0332s0040 | 33.028 | 109 | 62 | 4 | 35 | 133 | 188 | 295 | 6.37e-11 | 59.3 |
| MS.gene67080.t1 | MTR_1g112730 | 32.609 | 92 | 52 | 3 | 34 | 115 | 886 | 977 | 8.08e-11 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67080.t1 | AT1G64230 | 91.216 | 148 | 13 | 0 | 1 | 148 | 1 | 148 | 4.68e-103 | 291 |
| MS.gene67080.t1 | AT1G64230 | 91.216 | 148 | 13 | 0 | 1 | 148 | 1 | 148 | 4.68e-103 | 291 |
| MS.gene67080.t1 | AT5G53300 | 91.892 | 148 | 12 | 0 | 1 | 148 | 1 | 148 | 1.33e-102 | 290 |
| MS.gene67080.t1 | AT5G53300 | 91.892 | 148 | 12 | 0 | 1 | 148 | 1 | 148 | 1.33e-102 | 290 |
| MS.gene67080.t1 | AT5G53300 | 91.892 | 148 | 12 | 0 | 1 | 148 | 1 | 148 | 1.33e-102 | 290 |
| MS.gene67080.t1 | AT5G41700 | 91.216 | 148 | 13 | 0 | 1 | 148 | 1 | 148 | 1.53e-102 | 290 |
| MS.gene67080.t1 | AT5G41700 | 91.216 | 148 | 13 | 0 | 1 | 148 | 1 | 148 | 1.53e-102 | 290 |
| MS.gene67080.t1 | AT5G41700 | 91.216 | 148 | 13 | 0 | 1 | 148 | 1 | 148 | 1.53e-102 | 290 |
| MS.gene67080.t1 | AT4G27960 | 91.216 | 148 | 13 | 0 | 1 | 148 | 1 | 148 | 3.20e-102 | 289 |
| MS.gene67080.t1 | AT4G27960 | 91.216 | 148 | 13 | 0 | 1 | 148 | 31 | 178 | 1.33e-101 | 288 |
| MS.gene67080.t1 | AT3G08690 | 89.189 | 148 | 16 | 0 | 1 | 148 | 1 | 148 | 3.01e-100 | 284 |
| MS.gene67080.t1 | AT3G08690 | 89.189 | 148 | 16 | 0 | 1 | 148 | 1 | 148 | 3.01e-100 | 284 |
| MS.gene67080.t1 | AT5G56150 | 88.514 | 148 | 17 | 0 | 1 | 148 | 1 | 148 | 5.14e-100 | 283 |
| MS.gene67080.t1 | AT5G41700 | 89.933 | 149 | 14 | 1 | 1 | 148 | 1 | 149 | 1.01e-99 | 283 |
| MS.gene67080.t1 | AT1G64230 | 85.350 | 157 | 14 | 1 | 1 | 148 | 1 | 157 | 2.12e-98 | 280 |
| MS.gene67080.t1 | AT2G16740 | 85.714 | 147 | 21 | 0 | 1 | 147 | 1 | 147 | 9.05e-97 | 275 |
| MS.gene67080.t1 | AT1G64230 | 70.526 | 190 | 14 | 1 | 1 | 148 | 1 | 190 | 5.22e-94 | 270 |
| MS.gene67080.t1 | AT1G64230 | 70.526 | 190 | 14 | 1 | 1 | 148 | 1 | 190 | 5.22e-94 | 270 |
| MS.gene67080.t1 | AT3G08700 | 77.181 | 149 | 33 | 1 | 1 | 148 | 1 | 149 | 5.02e-86 | 248 |
| MS.gene67080.t1 | AT3G08700 | 77.181 | 149 | 33 | 1 | 1 | 148 | 1 | 149 | 5.02e-86 | 248 |
| MS.gene67080.t1 | AT5G41700 | 91.346 | 104 | 9 | 0 | 1 | 104 | 1 | 104 | 7.42e-70 | 207 |
| MS.gene67080.t1 | AT5G53300 | 88.991 | 109 | 10 | 1 | 1 | 107 | 1 | 109 | 5.90e-69 | 204 |
| MS.gene67080.t1 | AT5G56150 | 89.320 | 103 | 11 | 0 | 1 | 103 | 1 | 103 | 9.04e-68 | 201 |
| MS.gene67080.t1 | AT3G13550 | 48.276 | 145 | 75 | 0 | 2 | 146 | 37 | 181 | 2.56e-53 | 167 |
| MS.gene67080.t1 | AT1G16890 | 48.951 | 143 | 73 | 0 | 4 | 146 | 8 | 150 | 2.32e-47 | 150 |
| MS.gene67080.t1 | AT5G62540 | 51.880 | 133 | 64 | 0 | 2 | 134 | 5 | 137 | 9.06e-47 | 149 |
| MS.gene67080.t1 | AT1G78870 | 48.252 | 143 | 74 | 0 | 4 | 146 | 8 | 150 | 1.79e-46 | 148 |
| MS.gene67080.t1 | AT1G14400 | 46.575 | 146 | 73 | 1 | 2 | 142 | 5 | 150 | 4.26e-45 | 145 |
| MS.gene67080.t1 | AT1G14400 | 46.575 | 146 | 73 | 1 | 2 | 142 | 5 | 150 | 4.26e-45 | 145 |
| MS.gene67080.t1 | AT1G36340 | 47.619 | 147 | 76 | 1 | 2 | 148 | 9 | 154 | 6.70e-45 | 144 |
| MS.gene67080.t1 | AT1G36340 | 47.619 | 147 | 76 | 1 | 2 | 148 | 9 | 154 | 6.70e-45 | 144 |
| MS.gene67080.t1 | AT2G02760 | 45.890 | 146 | 74 | 1 | 2 | 142 | 5 | 150 | 1.01e-44 | 144 |
| MS.gene67080.t1 | AT2G02760 | 45.890 | 146 | 74 | 1 | 2 | 142 | 5 | 150 | 1.01e-44 | 144 |
| MS.gene67080.t1 | AT2G02760 | 45.890 | 146 | 74 | 1 | 2 | 142 | 5 | 150 | 1.01e-44 | 144 |
| MS.gene67080.t1 | AT2G02760 | 45.890 | 146 | 74 | 1 | 2 | 142 | 5 | 150 | 1.01e-44 | 144 |
| MS.gene67080.t1 | AT1G16890 | 46.711 | 152 | 72 | 1 | 4 | 146 | 8 | 159 | 1.36e-44 | 144 |
| MS.gene67080.t1 | AT3G13550 | 50.877 | 114 | 56 | 0 | 2 | 115 | 37 | 150 | 9.17e-43 | 139 |
| MS.gene67080.t1 | AT1G16890 | 52.174 | 115 | 55 | 0 | 32 | 146 | 3 | 117 | 8.53e-41 | 133 |
| MS.gene67080.t1 | AT1G78870 | 52.174 | 115 | 55 | 0 | 32 | 146 | 3 | 117 | 1.24e-40 | 132 |
| MS.gene67080.t1 | AT5G50870 | 46.528 | 144 | 75 | 2 | 5 | 146 | 6 | 149 | 5.79e-39 | 130 |
| MS.gene67080.t1 | AT1G78870 | 51.724 | 116 | 55 | 1 | 32 | 146 | 3 | 118 | 8.27e-39 | 128 |
| MS.gene67080.t1 | AT5G50870 | 43.226 | 155 | 75 | 3 | 5 | 146 | 6 | 160 | 1.55e-35 | 122 |
| MS.gene67080.t1 | AT3G24515 | 43.312 | 157 | 76 | 3 | 3 | 146 | 8 | 164 | 4.93e-35 | 125 |
| MS.gene67080.t1 | AT2G32790 | 47.333 | 150 | 70 | 4 | 2 | 146 | 30 | 175 | 1.31e-34 | 119 |
| MS.gene67080.t1 | AT5G25760 | 39.456 | 147 | 85 | 3 | 5 | 147 | 7 | 153 | 1.03e-32 | 113 |
| MS.gene67080.t1 | AT5G25760 | 39.456 | 147 | 85 | 3 | 5 | 147 | 7 | 153 | 1.03e-32 | 113 |
| MS.gene67080.t1 | AT3G24515 | 37.912 | 182 | 75 | 4 | 3 | 146 | 8 | 189 | 2.90e-32 | 119 |
| MS.gene67080.t1 | AT1G78870 | 46.667 | 105 | 56 | 0 | 4 | 108 | 8 | 112 | 4.06e-31 | 108 |
| MS.gene67080.t1 | AT3G57870 | 38.816 | 152 | 86 | 3 | 1 | 145 | 5 | 156 | 1.41e-30 | 108 |
| MS.gene67080.t1 | AT3G20060 | 41.406 | 128 | 75 | 0 | 4 | 131 | 39 | 166 | 2.42e-30 | 108 |
| MS.gene67080.t1 | AT1G50490 | 42.188 | 128 | 74 | 0 | 4 | 131 | 38 | 165 | 6.39e-30 | 107 |
| MS.gene67080.t1 | AT3G20060 | 42.017 | 119 | 67 | 1 | 13 | 131 | 5 | 121 | 1.07e-28 | 102 |
| MS.gene67080.t1 | AT2G46030 | 36.486 | 148 | 91 | 3 | 1 | 146 | 1 | 147 | 7.33e-28 | 102 |
| MS.gene67080.t1 | AT2G46030 | 36.486 | 148 | 91 | 3 | 1 | 146 | 1 | 147 | 7.33e-28 | 102 |
| MS.gene67080.t1 | AT2G46030 | 39.024 | 123 | 73 | 2 | 26 | 146 | 28 | 150 | 1.98e-27 | 101 |
| MS.gene67080.t1 | AT2G46030 | 39.024 | 123 | 73 | 2 | 26 | 146 | 28 | 150 | 1.98e-27 | 101 |
| MS.gene67080.t1 | AT2G46030 | 36.486 | 148 | 91 | 3 | 1 | 146 | 73 | 219 | 2.05e-27 | 102 |
| MS.gene67080.t1 | AT5G05080 | 37.063 | 143 | 90 | 0 | 4 | 146 | 13 | 155 | 2.65e-27 | 102 |
| MS.gene67080.t1 | AT5G05080 | 37.063 | 143 | 90 | 0 | 4 | 146 | 13 | 155 | 2.65e-27 | 102 |
| MS.gene67080.t1 | AT5G05080 | 37.063 | 143 | 90 | 0 | 4 | 146 | 13 | 155 | 2.65e-27 | 102 |
| MS.gene67080.t1 | AT5G05080 | 37.063 | 143 | 90 | 0 | 4 | 146 | 13 | 155 | 2.65e-27 | 102 |
| MS.gene67080.t1 | AT4G36800 | 38.686 | 137 | 79 | 4 | 5 | 139 | 34 | 167 | 2.68e-27 | 100 |
| MS.gene67080.t1 | AT4G36800 | 38.686 | 137 | 79 | 4 | 5 | 139 | 34 | 167 | 2.68e-27 | 100 |
| MS.gene67080.t1 | AT3G55380 | 36.296 | 135 | 72 | 2 | 15 | 135 | 19 | 153 | 8.15e-27 | 99.0 |
| MS.gene67080.t1 | AT1G63800 | 40.000 | 110 | 64 | 2 | 39 | 146 | 23 | 132 | 3.97e-25 | 94.7 |
| MS.gene67080.t1 | AT1G63800 | 40.000 | 110 | 64 | 2 | 39 | 146 | 38 | 147 | 4.29e-25 | 95.1 |
| MS.gene67080.t1 | AT5G41340 | 35.772 | 123 | 77 | 2 | 26 | 146 | 25 | 147 | 4.50e-25 | 95.1 |
| MS.gene67080.t1 | AT5G59300 | 34.028 | 144 | 81 | 2 | 15 | 144 | 18 | 161 | 1.43e-24 | 93.2 |
| MS.gene67080.t1 | AT3G46460 | 33.333 | 144 | 82 | 2 | 15 | 144 | 18 | 161 | 2.27e-24 | 92.8 |
| MS.gene67080.t1 | AT2G18600 | 35.036 | 137 | 84 | 4 | 5 | 139 | 35 | 168 | 3.77e-23 | 90.1 |
| MS.gene67080.t1 | AT2G18600 | 35.036 | 137 | 84 | 4 | 5 | 139 | 35 | 168 | 3.77e-23 | 90.1 |
| MS.gene67080.t1 | AT5G41340 | 38.462 | 104 | 62 | 2 | 45 | 146 | 9 | 112 | 2.22e-22 | 87.0 |
| MS.gene67080.t1 | AT3G17000 | 36.752 | 117 | 68 | 3 | 2 | 114 | 12 | 126 | 1.41e-19 | 83.2 |
| MS.gene67080.t1 | AT3G55380 | 28.402 | 169 | 73 | 3 | 15 | 135 | 19 | 187 | 2.28e-19 | 80.5 |
| MS.gene67080.t1 | AT1G75440 | 39.815 | 108 | 59 | 3 | 1 | 107 | 15 | 117 | 2.52e-18 | 77.0 |
| MS.gene67080.t1 | AT1G45050 | 38.835 | 103 | 61 | 2 | 1 | 102 | 15 | 116 | 9.17e-18 | 75.5 |
| MS.gene67080.t1 | AT5G42990 | 39.806 | 103 | 60 | 2 | 1 | 102 | 15 | 116 | 1.18e-17 | 75.1 |
| MS.gene67080.t1 | AT1G17280 | 35.043 | 117 | 67 | 3 | 4 | 115 | 8 | 120 | 3.87e-17 | 75.5 |
| MS.gene67080.t1 | AT1G17280 | 35.043 | 117 | 67 | 3 | 4 | 115 | 8 | 120 | 3.87e-17 | 75.5 |
| MS.gene67080.t1 | AT1G17280 | 35.043 | 117 | 67 | 3 | 4 | 115 | 8 | 120 | 3.87e-17 | 75.5 |
| MS.gene67080.t1 | AT1G17280 | 35.043 | 117 | 67 | 3 | 4 | 115 | 8 | 120 | 3.87e-17 | 75.5 |
| MS.gene67080.t1 | AT1G17280 | 35.043 | 117 | 67 | 3 | 4 | 115 | 8 | 120 | 3.87e-17 | 75.5 |
| MS.gene67080.t1 | AT1G17280 | 35.043 | 117 | 67 | 3 | 4 | 115 | 8 | 120 | 3.87e-17 | 75.5 |
| MS.gene67080.t1 | AT1G17280 | 35.043 | 117 | 67 | 3 | 4 | 115 | 8 | 120 | 3.87e-17 | 75.5 |
| MS.gene67080.t1 | AT1G17280 | 35.043 | 117 | 67 | 3 | 4 | 115 | 8 | 120 | 3.87e-17 | 75.5 |
| MS.gene67080.t1 | AT4G36410 | 37.037 | 108 | 62 | 3 | 1 | 107 | 15 | 117 | 5.56e-17 | 73.6 |
| MS.gene67080.t1 | AT5G50430 | 35.043 | 117 | 67 | 3 | 4 | 115 | 8 | 120 | 6.21e-17 | 75.1 |
| MS.gene67080.t1 | AT5G50430 | 35.043 | 117 | 67 | 3 | 4 | 115 | 8 | 120 | 6.21e-17 | 75.1 |
| MS.gene67080.t1 | AT3G46460 | 29.730 | 111 | 65 | 1 | 47 | 144 | 9 | 119 | 4.13e-16 | 70.1 |
| MS.gene67080.t1 | AT3G46460 | 29.730 | 111 | 65 | 1 | 47 | 144 | 9 | 119 | 4.13e-16 | 70.1 |
| MS.gene67080.t1 | AT1G17280 | 32.520 | 123 | 68 | 3 | 4 | 115 | 8 | 126 | 8.56e-16 | 72.0 |
Find 48 sgRNAs with CRISPR-Local
Find 198 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTACCTTTGGTGGCTTAAA+TGG | 0.184645 | 1.2:-3546582 | None:intergenic |
| CTCCCATTGCTGTTGATGTT+AGG | 0.317472 | 1.2:-3547373 | None:intergenic |
| TTGTACATGTGGGCAATATC+AGG | 0.375872 | 1.2:-3547980 | None:intergenic |
| TCAGGCACCAAAGGATCATC+TGG | 0.377413 | 1.2:-3547962 | None:intergenic |
| CCTCCTGTGTCTTGCAGTGC+TGG | 0.380892 | 1.2:+3545451 | MS.gene67080:CDS |
| GGTGGCTTAAATGGATAATC+TGG | 0.389530 | 1.2:-3546573 | None:intergenic |
| TGAAACAGGTCTTCACCAAC+AGG | 0.427366 | 1.2:-3546474 | None:intergenic |
| TCCCATTGCTGTTGATGTTA+GGG | 0.427658 | 1.2:-3547372 | None:intergenic |
| TAGTAGCTTGCCAATGAAAC+AGG | 0.428793 | 1.2:-3546488 | None:intergenic |
| TACTAGATAGTTACCTTTGG+TGG | 0.430453 | 1.2:-3546591 | None:intergenic |
| TCCAAACCCAGATGATCCTT+TGG | 0.446078 | 1.2:+3547955 | MS.gene67080:CDS |
| ATGAGACTACTGCCCGGTCT+TGG | 0.466598 | 1.2:+3548020 | MS.gene67080:CDS |
| ACCAAAGGATCATCTGGGTT+TGG | 0.469354 | 1.2:-3547956 | None:intergenic |
| TTGGTGAAGACCTGTTTCAT+TGG | 0.470566 | 1.2:+3546478 | MS.gene67080:CDS |
| ACGCATTACTAAGGAGTTGA+AGG | 0.472891 | 1.2:+3545414 | MS.gene67080:CDS |
| ACCCTAACATCAACAGCAAT+GGG | 0.488484 | 1.2:+3547371 | MS.gene67080:CDS |
| TCATTGGCAAGCTACTATCA+TGG | 0.489308 | 1.2:+3546494 | MS.gene67080:CDS |
| CATATTTCTGAGTCCAAGAC+CGG | 0.489374 | 1.2:-3548033 | None:intergenic |
| CCGGGCAGTAGTCTCATACT+TGG | 0.490655 | 1.2:-3548014 | None:intergenic |
| GGCCTCAAAACGCATTACTA+AGG | 0.503308 | 1.2:+3545405 | MS.gene67080:CDS |
| AGGAATACACCACCAGCATA+AGG | 0.516668 | 1.2:-3546531 | None:intergenic |
| TATACTCATGCAGGCCCTGT+TGG | 0.522486 | 1.2:+3546459 | MS.gene67080:intron |
| CTTTGTCAGTCTTGTACATG+TGG | 0.533650 | 1.2:-3547991 | None:intergenic |
| TCCTGCTCTTACTGTTTCGA+AGG | 0.541092 | 1.2:+3547429 | MS.gene67080:CDS |
| CACCCTAACATCAACAGCAA+TGG | 0.544450 | 1.2:+3547370 | MS.gene67080:CDS |
| CATTGGCAAGCTACTATCAT+GGG | 0.548045 | 1.2:+3546495 | MS.gene67080:CDS |
| GCAGAGAGCAAATTGACAGC+AGG | 0.555230 | 1.2:-3547925 | None:intergenic |
| GCAAGCTACTATCATGGGAC+CGG | 0.562370 | 1.2:+3546500 | MS.gene67080:CDS |
| GGCTTAAATGGATAATCTGG+TGG | 0.570933 | 1.2:-3546570 | None:intergenic |
| ACCTTCGAAACAGTAAGAGC+AGG | 0.586563 | 1.2:-3547430 | None:intergenic |
| CCGGCAGACAGTCCTTATGC+TGG | 0.594140 | 1.2:+3546519 | MS.gene67080:CDS |
| GTGGGAAGTGAATGGTCACT+AGG | 0.600222 | 1.2:-3546551 | None:intergenic |
| CCAGCATAAGGACTGTCTGC+CGG | 0.604386 | 1.2:-3546519 | None:intergenic |
| CATTGCTGTTGATGTTAGGG+TGG | 0.612271 | 1.2:-3547369 | None:intergenic |
| TGGGCAATATCAGGCACCAA+AGG | 0.612823 | 1.2:-3547971 | None:intergenic |
| TTATCCATTTAAGCCACCAA+AGG | 0.622832 | 1.2:+3546578 | MS.gene67080:CDS |
| GCAGACAGTCCTTATGCTGG+TGG | 0.624021 | 1.2:+3546522 | MS.gene67080:CDS |
| ATAATCTGGTGGGAAGTGAA+TGG | 0.636084 | 1.2:-3546559 | None:intergenic |
| GCTTAAATGGATAATCTGGT+GGG | 0.637843 | 1.2:-3546569 | None:intergenic |
| CAGGCACCAAAGGATCATCT+GGG | 0.640642 | 1.2:-3547961 | None:intergenic |
| TTGACATTCTGAAAGAGCAG+TGG | 0.642055 | 1.2:+3547404 | MS.gene67080:CDS |
| CCAAGTATGAGACTACTGCC+CGG | 0.645693 | 1.2:+3548014 | MS.gene67080:CDS |
| TTTGTCAGTCTTGTACATGT+GGG | 0.652799 | 1.2:-3547990 | None:intergenic |
| ATACCAGCACTGCAAGACAC+AGG | 0.653347 | 1.2:-3545454 | None:intergenic |
| CCAGCACTGCAAGACACAGG+AGG | 0.655706 | 1.2:-3545451 | None:intergenic |
| ATATTTCTGAGTCCAAGACC+GGG | 0.658098 | 1.2:-3548032 | None:intergenic |
| CAGCACTGCAAGACACAGGA+GGG | 0.671340 | 1.2:-3545450 | None:intergenic |
| GAAACAGGTCTTCACCAACA+GGG | 0.724000 | 1.2:-3546473 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATTAAAAACTATTTGAT+GGG | + | chr1.2:3546101-3546120 | MS.gene67080:intron | 10.0% |
| !! | ATCTATACAACAAATATTAA+AGG | - | chr1.2:3547147-3547166 | None:intergenic | 15.0% |
| !! | CAAAATTAAAAACTATTTGA+TGG | + | chr1.2:3546100-3546119 | MS.gene67080:intron | 15.0% |
| !! | TATAATATATAAAGATAACG+AGG | - | chr1.2:3546443-3546462 | None:intergenic | 15.0% |
| !!! | CATCAAATAGTTTTTAATTT+TGG | - | chr1.2:3546102-3546121 | None:intergenic | 15.0% |
| !!! | TATTTCATTTTCTATACTTT+TGG | + | chr1.2:3547666-3547685 | MS.gene67080:intron | 15.0% |
| !!! | TGTTTTGAAAATAATGTTTT+TGG | + | chr1.2:3547284-3547303 | MS.gene67080:intron | 15.0% |
| !! | AAAAAGTTAACATGTTCTTA+TGG | + | chr1.2:3545563-3545582 | MS.gene67080:intron | 20.0% |
| !! | AAACTATTGCTTAAAATCTA+TGG | + | chr1.2:3547625-3547644 | MS.gene67080:intron | 20.0% |
| !! | ATGATTCAACAAAGAAAATA+TGG | - | chr1.2:3545630-3545649 | None:intergenic | 20.0% |
| !! | ATTGAAATCAATATGTACTT+GGG | + | chr1.2:3546789-3546808 | MS.gene67080:intron | 20.0% |
| !! | TATTGAAATCAATATGTACT+TGG | + | chr1.2:3546788-3546807 | MS.gene67080:intron | 20.0% |
| !! | TTTATATATTATACTCATGC+AGG | + | chr1.2:3546450-3546469 | MS.gene67080:intron | 20.0% |
| !!! | ATATAATCATCTAAGATTCT+TGG | + | chr1.2:3546654-3546673 | MS.gene67080:intron | 20.0% |
| !!! | GAAAATAATGTTTTTGGTTT+AGG | + | chr1.2:3547290-3547309 | MS.gene67080:intron | 20.0% |
| !!! | TAAGAACATGTTAACTTTTT+TGG | - | chr1.2:3545563-3545582 | None:intergenic | 20.0% |
| !!! | TTAATTGTTCTTGTTTATCT+GGG | + | chr1.2:3546941-3546960 | MS.gene67080:intron | 20.0% |
| !!! | TTTAATTGTTCTTGTTTATC+TGG | + | chr1.2:3546940-3546959 | MS.gene67080:intron | 20.0% |
| !!! | TTTTTACTTCTGAATTAACT+TGG | - | chr1.2:3547607-3547626 | None:intergenic | 20.0% |
| ! | ACAAATATTTGTAAAGAGGA+AGG | - | chr1.2:3545606-3545625 | None:intergenic | 25.0% |
| ! | ACCATGTCTCAATATTAAAA+TGG | - | chr1.2:3546989-3547008 | None:intergenic | 25.0% |
| ! | ATCTCTTATATTCAAGTATC+TGG | - | chr1.2:3547093-3547112 | None:intergenic | 25.0% |
| ! | ATTACTTGAGAAGAATAAAG+TGG | + | chr1.2:3547817-3547836 | MS.gene67080:intron | 25.0% |
| ! | CTGAGGTAATTAAAAAATTC+TGG | - | chr1.2:3547849-3547868 | None:intergenic | 25.0% |
| ! | GATAGGTATATTGATGTTTA+TGG | + | chr1.2:3547543-3547562 | MS.gene67080:intron | 25.0% |
| ! | TAACTATCTAGTAATGAGAT+GGG | + | chr1.2:3546601-3546620 | MS.gene67080:intron | 25.0% |
| ! | TGCTTAAATTATTCACAATG+TGG | + | chr1.2:3547314-3547333 | MS.gene67080:intron | 25.0% |
| ! | TTACTTGAGAAGAATAAAGT+GGG | + | chr1.2:3547818-3547837 | MS.gene67080:intron | 25.0% |
| ! | TTATGGAAAAAAGTCTTGAT+AGG | + | chr1.2:3547526-3547545 | MS.gene67080:intron | 25.0% |
| ! | TTCCAATCAAACAATCATAT+AGG | + | chr1.2:3546278-3546297 | MS.gene67080:intron | 25.0% |
| !! | GTTTTATCTTGACTATTTGT+GGG | + | chr1.2:3546156-3546175 | MS.gene67080:intron | 25.0% |
| !! | TGTTTTATCTTGACTATTTG+TGG | + | chr1.2:3546155-3546174 | MS.gene67080:intron | 25.0% |
| !!! | AGATTCTTGGTTTTTAATTG+TGG | + | chr1.2:3546667-3546686 | MS.gene67080:intron | 25.0% |
| !!! | ATGTTTGTGCTTTTTACTTA+TGG | + | chr1.2:3547509-3547528 | MS.gene67080:intron | 25.0% |
| !!! | TCTTTTGCCATTTTCAAATA+TGG | + | chr1.2:3545676-3545695 | MS.gene67080:intron | 25.0% |
| !!! | TTACCCAGTTTTTTATACAA+GGG | + | chr1.2:3547777-3547796 | MS.gene67080:intron | 25.0% |
| !!! | TTTACCCAGTTTTTTATACA+AGG | + | chr1.2:3547776-3547795 | MS.gene67080:intron | 25.0% |
| AAATATTGAAACAGCAGGAA+TGG | - | chr1.2:3545518-3545537 | None:intergenic | 30.0% | |
| AAATGGGCCATATTTGAAAA+TGG | - | chr1.2:3545686-3545705 | None:intergenic | 30.0% | |
| AACATGTTCTTATGGTATTC+TGG | + | chr1.2:3545571-3545590 | MS.gene67080:intron | 30.0% | |
| AATATTGAAACAGCAGGAAT+GGG | - | chr1.2:3545517-3545536 | None:intergenic | 30.0% | |
| ACTTCCCTTGTATAAAAAAC+TGG | - | chr1.2:3547784-3547803 | None:intergenic | 30.0% | |
| AGCAAGCCATATTTGAAAAT+GGG | - | chr1.2:3545702-3545721 | None:intergenic | 30.0% | |
| ATGTTTATGGAGAAGTTGAA+TGG | + | chr1.2:3547556-3547575 | MS.gene67080:intron | 30.0% | |
| ATTATTACAGTAGACAGTTG+TGG | + | chr1.2:3547872-3547891 | MS.gene67080:intron | 30.0% | |
| CATTACTAGATAGTTACCTT+TGG | - | chr1.2:3546597-3546616 | None:intergenic | 30.0% | |
| CTTCCCTTGTATAAAAAACT+GGG | - | chr1.2:3547783-3547802 | None:intergenic | 30.0% | |
| GATATTTATAGCATGCTTGT+AGG | + | chr1.2:3547164-3547183 | MS.gene67080:intron | 30.0% | |
| GGGTCACATAATTGTATAAA+AGG | + | chr1.2:3546121-3546140 | MS.gene67080:intron | 30.0% | |
| GTAACTATCTAGTAATGAGA+TGG | + | chr1.2:3546600-3546619 | MS.gene67080:intron | 30.0% | |
| GTCCTATATGATTGTTTGAT+TGG | - | chr1.2:3546283-3546302 | None:intergenic | 30.0% | |
| TAAAAAACTGGGTAAAAGCT+AGG | - | chr1.2:3547772-3547791 | None:intergenic | 30.0% | |
| TAGCAAGCCATATTTGAAAA+TGG | - | chr1.2:3545703-3545722 | None:intergenic | 30.0% | |
| TCTACTGTAATAATCAACTG+AGG | - | chr1.2:3547866-3547885 | None:intergenic | 30.0% | |
| TGGCACAAATATTTGTAAAG+AGG | - | chr1.2:3545610-3545629 | None:intergenic | 30.0% | |
| ! | ATATGGCCCATTTTCAAATA+TGG | + | chr1.2:3545693-3545712 | MS.gene67080:intron | 30.0% |
| ! | GAAGCTTCTTTTCTATGTAT+AGG | + | chr1.2:3546412-3546431 | MS.gene67080:intron | 30.0% |
| !! | GACTATATAGTAGCCATTTT+AGG | - | chr1.2:3546341-3546360 | None:intergenic | 30.0% |
| !! | GCCATTTTAATATTGAGACA+TGG | + | chr1.2:3546985-3547004 | MS.gene67080:intron | 30.0% |
| !! | TTCTGAAATATTGAAACAGC+AGG | - | chr1.2:3545523-3545542 | None:intergenic | 30.0% |
| !!! | AGTTTTTTCTAGTTAGCTGT+TGG | + | chr1.2:3547705-3547724 | MS.gene67080:intron | 30.0% |
| AAAGCCAAAAATCCGACATA+TGG | + | chr1.2:3545757-3545776 | MS.gene67080:intron | 35.0% | |
| AATCCATGTTACCACAATTG+AGG | - | chr1.2:3546767-3546786 | None:intergenic | 35.0% | |
| ATATCAAAGCAGAACCTTCA+TGG | + | chr1.2:3547036-3547055 | MS.gene67080:intron | 35.0% | |
| ATCTACTGTCCATCAAATCT+AGG | - | chr1.2:3546015-3546034 | None:intergenic | 35.0% | |
| ATGGTTCATGTCATTGACAT+AGG | + | chr1.2:3547055-3547074 | MS.gene67080:intron | 35.0% | |
| CAATAAGTTAATCCCAACCA+AGG | - | chr1.2:3547467-3547486 | None:intergenic | 35.0% | |
| CATCTTGTCTGAACTGTATT+GGG | + | chr1.2:3545951-3545970 | MS.gene67080:intron | 35.0% | |
| CTTCTCGCACACTTAAAAAT+AGG | + | chr1.2:3546201-3546220 | MS.gene67080:intron | 35.0% | |
| GATAAGGATCCTAGATTTGA+TGG | + | chr1.2:3546003-3546022 | MS.gene67080:intron | 35.0% | |
| GATTTATCTTGTATTGCTGC+AGG | + | chr1.2:3547901-3547920 | MS.gene67080:intron | 35.0% | |
| GATTTATTGCAACCTCGATA+AGG | + | chr1.2:3545987-3546006 | MS.gene67080:intron | 35.0% | |
| GCTTAAATGGATAATCTGGT+GGG | - | chr1.2:3546572-3546591 | None:intergenic | 35.0% | |
| TACGATAATATGCCTTGGTT+GGG | + | chr1.2:3547452-3547471 | MS.gene67080:intron | 35.0% | |
| TACTAGATAGTTACCTTTGG+TGG | - | chr1.2:3546594-3546613 | None:intergenic | 35.0% | |
| TATGGAGAAGTTGAATGGTA+GGG | + | chr1.2:3547561-3547580 | MS.gene67080:intron | 35.0% | |
| TGTATTGCTAAGGTCAAATG+CGG | + | chr1.2:3546703-3546722 | MS.gene67080:intron | 35.0% | |
| TTATCCATTTAAGCCACCAA+AGG | + | chr1.2:3546578-3546597 | MS.gene67080:CDS | 35.0% | |
| TTATGGAGAAGTTGAATGGT+AGG | + | chr1.2:3547560-3547579 | MS.gene67080:intron | 35.0% | |
| TTGTTGTCATGATGTAGTTG+AGG | + | chr1.2:3546741-3546760 | MS.gene67080:intron | 35.0% | |
| TTTGACCTTAGCAATACATC+CGG | - | chr1.2:3546701-3546720 | None:intergenic | 35.0% | |
| ! | ATCTTTTCTCCCTTTTCTTG+AGG | + | chr1.2:3547223-3547242 | MS.gene67080:intron | 35.0% |
| ! | ATTCACAATGTGGCTTTTGT+AGG | + | chr1.2:3547324-3547343 | MS.gene67080:intron | 35.0% |
| ! | TGAGAGCATGATTTGATACA+AGG | + | chr1.2:3546249-3546268 | MS.gene67080:intron | 35.0% |
| ! | TTTGTCAGTCTTGTACATGT+GGG | - | chr1.2:3547993-3548012 | None:intergenic | 35.0% |
| AAAGAAGCTTCAAGCGTACT+TGG | - | chr1.2:3546403-3546422 | None:intergenic | 40.0% | |
| AACTCCGTTCCTCAAGAAAA+GGG | - | chr1.2:3547235-3547254 | None:intergenic | 40.0% | |
| AATATGTACTTGGGCTGATG+TGG | + | chr1.2:3546798-3546817 | MS.gene67080:intron | 40.0% | |
| AATCCATGTGACCACAATTG+AGG | - | chr1.2:3546853-3546872 | None:intergenic | 40.0% | |
| AATGGCTAAACGCAATGACA+TGG | - | chr1.2:3546971-3546990 | None:intergenic | 40.0% | |
| ACCCTAACATCAACAGCAAT+GGG | + | chr1.2:3547371-3547390 | MS.gene67080:CDS | 40.0% | |
| ACGCATTACTAAGGAGTTGA+AGG | + | chr1.2:3545414-3545433 | MS.gene67080:CDS | 40.0% | |
| ACTGTGGAATTTGGAGAGAT+GGG | + | chr1.2:3545926-3545945 | MS.gene67080:intron | 40.0% | |
| ATAATCTGGTGGGAAGTGAA+TGG | - | chr1.2:3546562-3546581 | None:intergenic | 40.0% | |
| ATCTCTCCAAATTCCACAGT+AGG | - | chr1.2:3545926-3545945 | None:intergenic | 40.0% | |
| ATGTCATTGACATAGGCTGA+TGG | + | chr1.2:3547062-3547081 | MS.gene67080:intron | 40.0% | |
| CATTGGCAAGCTACTATCAT+GGG | + | chr1.2:3546495-3546514 | MS.gene67080:CDS | 40.0% | |
| CGCAATAATGCATCCATATC+AGG | - | chr1.2:3545888-3545907 | None:intergenic | 40.0% | |
| GATGCATTATTGCGAAAGTC+GGG | + | chr1.2:3545894-3545913 | MS.gene67080:intron | 40.0% | |
| GCATCTTGTCTGAACTGTAT+TGG | + | chr1.2:3545950-3545969 | MS.gene67080:intron | 40.0% | |
| GGATGCATTATTGCGAAAGT+CGG | + | chr1.2:3545893-3545912 | MS.gene67080:intron | 40.0% | |
| GGCTGATGTGGATTTAATTG+TGG | + | chr1.2:3546810-3546829 | MS.gene67080:intron | 40.0% | |
| GGCTTAAATGGATAATCTGG+TGG | - | chr1.2:3546573-3546592 | None:intergenic | 40.0% | |
| GGTGGCTTAAATGGATAATC+TGG | - | chr1.2:3546576-3546595 | None:intergenic | 40.0% | |
| GTACGATAATATGCCTTGGT+TGG | + | chr1.2:3547451-3547470 | MS.gene67080:intron | 40.0% | |
| GTCAATGACATGAACCATGA+AGG | - | chr1.2:3547053-3547072 | None:intergenic | 40.0% | |
| TACTGTGGAATTTGGAGAGA+TGG | + | chr1.2:3545925-3545944 | MS.gene67080:intron | 40.0% | |
| TCATTGGCAAGCTACTATCA+TGG | + | chr1.2:3546494-3546513 | MS.gene67080:CDS | 40.0% | |
| TCTAACAGTACGTGTGAATC+AGG | + | chr1.2:3546226-3546245 | MS.gene67080:intron | 40.0% | |
| TCTCATGCTCTCACCTAAAA+TGG | + | chr1.2:3546325-3546344 | MS.gene67080:intron | 40.0% | |
| TGATTCACACGTACTGTTAG+AGG | - | chr1.2:3546227-3546246 | None:intergenic | 40.0% | |
| TGTCATTGACATAGGCTGAT+GGG | + | chr1.2:3547063-3547082 | MS.gene67080:intron | 40.0% | |
| TTGACCTTAGCAATACATCC+GGG | - | chr1.2:3546700-3546719 | None:intergenic | 40.0% | |
| TTGGTGAAGACCTGTTTCAT+TGG | + | chr1.2:3546478-3546497 | MS.gene67080:CDS | 40.0% | |
| TTGTACATGTGGGCAATATC+AGG | - | chr1.2:3547983-3548002 | None:intergenic | 40.0% | |
| TTGTGGTCATGTTGTAGTTG+AGG | + | chr1.2:3546827-3546846 | MS.gene67080:intron | 40.0% | |
| TTTAATTGTGGTCTGTGTCC+CGG | + | chr1.2:3546679-3546698 | MS.gene67080:intron | 40.0% | |
| ! | ATATTTCTGAGTCCAAGACC+GGG | - | chr1.2:3548035-3548054 | None:intergenic | 40.0% |
| ! | CAAATCTAGGATCCTTATCG+AGG | - | chr1.2:3546002-3546021 | None:intergenic | 40.0% |
| ! | CATATTTCTGAGTCCAAGAC+CGG | - | chr1.2:3548036-3548055 | None:intergenic | 40.0% |
| ! | CTCCTTAGTAATGCGTTTTG+AGG | - | chr1.2:3545410-3545429 | None:intergenic | 40.0% |
| ! | CTTTGTCAGTCTTGTACATG+TGG | - | chr1.2:3547994-3548013 | None:intergenic | 40.0% |
| ! | GAAGGTACGATAATATGCCT+TGG | + | chr1.2:3547447-3547466 | MS.gene67080:intron | 40.0% |
| ! | GTGGAACACTTTTGTTCGAA+AGG | - | chr1.2:3547353-3547372 | None:intergenic | 40.0% |
| ! | GTTACCTTTGGTGGCTTAAA+TGG | - | chr1.2:3546585-3546604 | None:intergenic | 40.0% |
| ! | TAGTAGCTTGCCAATGAAAC+AGG | - | chr1.2:3546491-3546510 | None:intergenic | 40.0% |
| ! | TCCCATTGCTGTTGATGTTA+GGG | - | chr1.2:3547375-3547394 | None:intergenic | 40.0% |
| ! | TTCTCCCTTTTCTTGAGGAA+CGG | + | chr1.2:3547228-3547247 | MS.gene67080:intron | 40.0% |
| ! | TTGACATTCTGAAAGAGCAG+TGG | + | chr1.2:3547404-3547423 | MS.gene67080:CDS | 40.0% |
| ! | TTTTCTCCTCTTACTCTCGA+CGG | - | chr1.2:3546047-3546066 | None:intergenic | 40.0% |
| !! | CTTATGGTATTCTGGAGCAT+TGG | + | chr1.2:3545579-3545598 | MS.gene67080:intron | 40.0% |
| AACTGGGTAAAAGCTAGGCA+AGG | - | chr1.2:3547767-3547786 | None:intergenic | 45.0% | |
| ACCAAAGGATCATCTGGGTT+TGG | - | chr1.2:3547959-3547978 | None:intergenic | 45.0% | |
| ACCCATCACAAAATTGGCCA+TGG | - | chr1.2:3545853-3545872 | None:intergenic | 45.0% | |
| ACCTTCGAAACAGTAAGAGC+AGG | - | chr1.2:3547433-3547452 | None:intergenic | 45.0% | |
| AGGAATACACCACCAGCATA+AGG | - | chr1.2:3546534-3546553 | None:intergenic | 45.0% | |
| AGGCCTCAATTGTGGTAACA+TGG | + | chr1.2:3546761-3546780 | MS.gene67080:intron | 45.0% | |
| ATTGAAACAGCAGGAATGGG+TGG | - | chr1.2:3545514-3545533 | None:intergenic | 45.0% | |
| CAACTCCGTTCCTCAAGAAA+AGG | - | chr1.2:3547236-3547255 | None:intergenic | 45.0% | |
| CACCCTAACATCAACAGCAA+TGG | + | chr1.2:3547370-3547389 | MS.gene67080:CDS | 45.0% | |
| CATCACAAAATTGGCCATGG+CGG | - | chr1.2:3545850-3545869 | None:intergenic | 45.0% | |
| GAAACAGGTCTTCACCAACA+GGG | - | chr1.2:3546476-3546495 | None:intergenic | 45.0% | |
| GGCCTCAAAACGCATTACTA+AGG | + | chr1.2:3545405-3545424 | MS.gene67080:CDS | 45.0% | |
| GTCATCAGTGTTATCGACAG+CGG | + | chr1.2:3545734-3545753 | MS.gene67080:intron | 45.0% | |
| TACAAACCGTCGAGAGTAAG+AGG | + | chr1.2:3546038-3546057 | MS.gene67080:intron | 45.0% | |
| TCAGCACCTACTGTGGAATT+TGG | + | chr1.2:3545917-3545936 | MS.gene67080:intron | 45.0% | |
| TCCAAACCCAGATGATCCTT+TGG | + | chr1.2:3547955-3547974 | MS.gene67080:CDS | 45.0% | |
| TCCTGCTCTTACTGTTTCGA+AGG | + | chr1.2:3547429-3547448 | MS.gene67080:CDS | 45.0% | |
| TGAAACAGGTCTTCACCAAC+AGG | - | chr1.2:3546477-3546496 | None:intergenic | 45.0% | |
| TGTAGTTGAGGCCTCAATTG+TGG | + | chr1.2:3546753-3546772 | MS.gene67080:intron | 45.0% | |
| TTGAAACAGCAGGAATGGGT+GGG | - | chr1.2:3545513-3545532 | None:intergenic | 45.0% | |
| ! | CATTGCTGTTGATGTTAGGG+TGG | - | chr1.2:3547372-3547391 | None:intergenic | 45.0% |
| ! | CTCCCATTGCTGTTGATGTT+AGG | - | chr1.2:3547376-3547395 | None:intergenic | 45.0% |
| ! | CTTTTCTTGAGGAACGGAGT+TGG | + | chr1.2:3547234-3547253 | MS.gene67080:intron | 45.0% |
| ! | GCCATGGCCAATTTTGTGAT+GGG | + | chr1.2:3545849-3545868 | MS.gene67080:intron | 45.0% |
| ! | GGCACCATATGTCGGATTTT+TGG | - | chr1.2:3545764-3545783 | None:intergenic | 45.0% |
| ! | TGCATCCATATCAGGCATTG+AGG | - | chr1.2:3545880-3545899 | None:intergenic | 45.0% |
| !! | ATGGCCAATTTTGTGATGGG+TGG | + | chr1.2:3545852-3545871 | MS.gene67080:intron | 45.0% |
| AAGGTCAAATGCGGCTGATG+TGG | + | chr1.2:3546712-3546731 | MS.gene67080:intron | 50.0% | |
| AGGCCTCAATTGTGGTCACA+TGG | + | chr1.2:3546847-3546866 | MS.gene67080:intron | 50.0% | |
| ATACCAGCACTGCAAGACAC+AGG | - | chr1.2:3545457-3545476 | None:intergenic | 50.0% | |
| CAGGCACCAAAGGATCATCT+GGG | - | chr1.2:3547964-3547983 | None:intergenic | 50.0% | |
| CCAAGTATGAGACTACTGCC+CGG | + | chr1.2:3548014-3548033 | MS.gene67080:CDS | 50.0% | |
| GAGAGAGAGAGACTGTGCAA+TGG | - | chr1.2:3545485-3545504 | None:intergenic | 50.0% | |
| GCAAGCTACTATCATGGGAC+CGG | + | chr1.2:3546500-3546519 | MS.gene67080:CDS | 50.0% | |
| GCAGAGAGCAAATTGACAGC+AGG | - | chr1.2:3547928-3547947 | None:intergenic | 50.0% | |
| GTGGGAAGTGAATGGTCACT+AGG | - | chr1.2:3546554-3546573 | None:intergenic | 50.0% | |
| GTGTCCCGGATGTATTGCTA+AGG | + | chr1.2:3546693-3546712 | MS.gene67080:intron | 50.0% | |
| TATACTCATGCAGGCCCTGT+TGG | + | chr1.2:3546459-3546478 | MS.gene67080:intron | 50.0% | |
| TCAGGCACCAAAGGATCATC+TGG | - | chr1.2:3547965-3547984 | None:intergenic | 50.0% | |
| TGGCACCTCAATGCCTGATA+TGG | + | chr1.2:3545872-3545891 | MS.gene67080:intron | 50.0% | |
| TGGGCAATATCAGGCACCAA+AGG | - | chr1.2:3547974-3547993 | None:intergenic | 50.0% | |
| ! | CGCCATGGCCAATTTTGTGA+TGG | + | chr1.2:3545848-3545867 | MS.gene67080:intron | 50.0% |
| ! | GGTGCCACCCATCACAAAAT+TGG | - | chr1.2:3545859-3545878 | None:intergenic | 50.0% |
| !! | CTGCACAAAGTGGCGGATAA+CGG | + | chr1.2:3545790-3545809 | MS.gene67080:intron | 50.0% |
| !!! | GGATATCAGTGGCGGGTTTT+TGG | + | chr1.2:3545820-3545839 | MS.gene67080:intron | 50.0% |
| ATGAGACTACTGCCCGGTCT+TGG | + | chr1.2:3548020-3548039 | MS.gene67080:CDS | 55.0% | |
| CAGCACTGCAAGACACAGGA+GGG | - | chr1.2:3545453-3545472 | None:intergenic | 55.0% | |
| CCAGCATAAGGACTGTCTGC+CGG | - | chr1.2:3546522-3546541 | None:intergenic | 55.0% | |
| CCGGGCAGTAGTCTCATACT+TGG | - | chr1.2:3548017-3548036 | None:intergenic | 55.0% | |
| GCAGACAGTCCTTATGCTGG+TGG | + | chr1.2:3546522-3546541 | MS.gene67080:CDS | 55.0% | |
| ! | AGGATGGCGGCACCATATGT+CGG | - | chr1.2:3545772-3545791 | None:intergenic | 55.0% |
| ! | ATCCGCCACTTTGTGCAGGA+TGG | - | chr1.2:3545788-3545807 | None:intergenic | 55.0% |
| ! | CGTTATCCGCCACTTTGTGC+AGG | - | chr1.2:3545792-3545811 | None:intergenic | 55.0% |
| !! | AAAGTGGCGGATAACGGCCA+TGG | + | chr1.2:3545796-3545815 | MS.gene67080:intron | 55.0% |
| !!! | GGGTTTTTGGCTTTCCGCCA+TGG | + | chr1.2:3545833-3545852 | MS.gene67080:intron | 55.0% |
| AGTCGGGTCAGCACCTACTG+TGG | + | chr1.2:3545910-3545929 | MS.gene67080:intron | 60.0% | |
| CCAGCACTGCAAGACACAGG+AGG | - | chr1.2:3545454-3545473 | None:intergenic | 60.0% | |
| CCGGCAGACAGTCCTTATGC+TGG | + | chr1.2:3546519-3546538 | MS.gene67080:CDS | 60.0% | |
| CCTCCTGTGTCTTGCAGTGC+TGG | + | chr1.2:3545451-3545470 | MS.gene67080:CDS | 60.0% | |
| CGCCATCCTGCACAAAGTGG+CGG | + | chr1.2:3545783-3545802 | MS.gene67080:intron | 60.0% | |
| TGCCGCCATCCTGCACAAAG+TGG | + | chr1.2:3545780-3545799 | MS.gene67080:intron | 60.0% | |
| ! | CGCCACTTTGTGCAGGATGG+CGG | - | chr1.2:3545785-3545804 | None:intergenic | 60.0% |
| !! | ACGGCCATGGCGGATATCAG+TGG | + | chr1.2:3545809-3545828 | MS.gene67080:intron | 60.0% |
| !! | CCATGGCGGATATCAGTGGC+GGG | + | chr1.2:3545813-3545832 | MS.gene67080:intron | 60.0% |
| !! | GCCATGGCGGATATCAGTGG+CGG | + | chr1.2:3545812-3545831 | MS.gene67080:intron | 60.0% |
| CCCGCCACTGATATCCGCCA+TGG | - | chr1.2:3545816-3545835 | None:intergenic | 65.0% | |
| !! | GTGGCGGATAACGGCCATGG+CGG | + | chr1.2:3545799-3545818 | MS.gene67080:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 3545403 | 3548066 | 3545403 | ID=MS.gene67080 |
| chr1.2 | mRNA | 3545403 | 3548066 | 3545403 | ID=MS.gene67080.t1;Parent=MS.gene67080 |
| chr1.2 | exon | 3545403 | 3545472 | 3545403 | ID=MS.gene67080.t1.exon1;Parent=MS.gene67080.t1 |
| chr1.2 | CDS | 3545403 | 3545472 | 3545403 | ID=cds.MS.gene67080.t1;Parent=MS.gene67080.t1 |
| chr1.2 | exon | 3546472 | 3546599 | 3546472 | ID=MS.gene67080.t1.exon2;Parent=MS.gene67080.t1 |
| chr1.2 | CDS | 3546472 | 3546599 | 3546472 | ID=cds.MS.gene67080.t1;Parent=MS.gene67080.t1 |
| chr1.2 | exon | 3547346 | 3547450 | 3547346 | ID=MS.gene67080.t1.exon3;Parent=MS.gene67080.t1 |
| chr1.2 | CDS | 3547346 | 3547450 | 3547346 | ID=cds.MS.gene67080.t1;Parent=MS.gene67080.t1 |
| chr1.2 | exon | 3547923 | 3548066 | 3547923 | ID=MS.gene67080.t1.exon4;Parent=MS.gene67080.t1 |
| chr1.2 | CDS | 3547923 | 3548066 | 3547923 | ID=cds.MS.gene67080.t1;Parent=MS.gene67080.t1 |
| Gene Sequence |
| Protein sequence |
