Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68598.t1 | AFK39086.1 | 98.3 | 179 | 3 | 0 | 1 | 179 | 1 | 179 | 2.00E-93 | 351.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68598.t1 | Q9SYH2 | 65.0 | 180 | 57 | 2 | 5 | 178 | 4 | 183 | 1.4e-53 | 210.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68598.t1 | I3SFP4 | 98.3 | 179 | 3 | 0 | 1 | 179 | 1 | 179 | 1.5e-93 | 351.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene00182 | MS.gene68598 | PPI |
| MS.gene68113 | MS.gene68598 | PPI |
| MS.gene74085 | MS.gene68598 | PPI |
| MS.gene010619 | MS.gene68598 | PPI |
| MS.gene68598 | MS.gene063067 | PPI |
| MS.gene058216 | MS.gene68598 | PPI |
| MS.gene68598 | MS.gene65289 | PPI |
| MS.gene68598 | MS.gene56011 | PPI |
| MS.gene68598 | MS.gene68059 | PPI |
| MS.gene044943 | MS.gene68598 | PPI |
| MS.gene68598 | MS.gene64762 | PPI |
| MS.gene59465 | MS.gene68598 | PPI |
| MS.gene68716 | MS.gene68598 | PPI |
| MS.gene68598 | MS.gene062428 | PPI |
| MS.gene014181 | MS.gene68598 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68598.t1 | MTR_3g015130 | 98.883 | 179 | 2 | 0 | 1 | 179 | 1 | 179 | 3.03e-128 | 357 |
| MS.gene68598.t1 | MTR_4g123000 | 97.207 | 179 | 5 | 0 | 1 | 179 | 1 | 179 | 1.59e-126 | 353 |
| MS.gene68598.t1 | MTR_6g027990 | 74.510 | 51 | 13 | 0 | 77 | 127 | 36 | 86 | 3.50e-19 | 79.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68598.t1 | AT1G54140 | 66.484 | 182 | 53 | 2 | 4 | 178 | 3 | 183 | 1.73e-75 | 224 |
Find 47 sgRNAs with CRISPR-Local
Find 124 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATCCTCAGTTTCTTCTAT+AGG | 0.276264 | 8.1:+7935938 | None:intergenic |
| TTCTCTTCTTGAGACGGGTT+GGG | 0.349426 | 8.1:+7935896 | None:intergenic |
| GGATTTGAAATCAATCCTTT+TGG | 0.349810 | 8.1:+7935819 | None:intergenic |
| TGCACAATCTTTGCATCCCT+TGG | 0.390884 | 8.1:+7937356 | None:intergenic |
| ACATCATCAACATCAATTGC+AGG | 0.392863 | 8.1:+7937203 | None:intergenic |
| GCAGTCTTTGTTGAAATCAA+TGG | 0.422201 | 8.1:-7937336 | MS.gene68598:CDS |
| GGGGAAATGACACTCTTTGA+TGG | 0.423837 | 8.1:+7935852 | None:intergenic |
| TTTCTCTTCTTGAGACGGGT+TGG | 0.425429 | 8.1:+7935895 | None:intergenic |
| CCAAAGTCTATAGCAGGGCC+TGG | 0.446628 | 8.1:-7936040 | MS.gene68598:CDS |
| GACGGGTTGGGATCAGCATT+GGG | 0.453169 | 8.1:+7935908 | None:intergenic |
| GCAATCAATGTGTCCTGATC+GGG | 0.454600 | 8.1:+7936004 | None:intergenic |
| AGACGGGTTGGGATCAGCAT+TGG | 0.455142 | 8.1:+7935907 | None:intergenic |
| TCCCCTGCCTAAACGCCAAA+AGG | 0.463108 | 8.1:-7935834 | MS.gene68598:CDS |
| GGAATTGCGAACTGGTAGTT+GGG | 0.471146 | 8.1:+7935980 | None:intergenic |
| GTTTCCACTTCCACCCGATC+AGG | 0.473279 | 8.1:-7936017 | MS.gene68598:CDS |
| CCAGGCCCTGCTATAGACTT+TGG | 0.478355 | 8.1:+7936040 | None:intergenic |
| CAGCATGCTCTGAATACACC+TGG | 0.484633 | 8.1:+7937231 | None:intergenic |
| CAGTCTTTGTTGAAATCAAT+GGG | 0.492657 | 8.1:-7937335 | MS.gene68598:CDS |
| TGGAATTGCGAACTGGTAGT+TGG | 0.494497 | 8.1:+7935979 | None:intergenic |
| CAAAGTCTATAGCAGGGCCT+GGG | 0.507554 | 8.1:-7936039 | MS.gene68598:CDS |
| GTGTCCTGATCGGGTGGAAG+TGG | 0.509015 | 8.1:+7936013 | None:intergenic |
| CCATTGCCAAAGTCTATAGC+AGG | 0.509326 | 8.1:-7936046 | MS.gene68598:CDS |
| AACTTCTATGGCTGATAATG+AGG | 0.509441 | 8.1:-7937393 | None:intergenic |
| GGGAAATGACACTCTTTGAT+GGG | 0.522755 | 8.1:+7935853 | None:intergenic |
| AGTTCGCAATTCCAAACAAA+AGG | 0.527607 | 8.1:-7935970 | MS.gene68598:CDS |
| TAAACAAGTTCCTTGAGCTA+TGG | 0.532540 | 8.1:-7937286 | MS.gene68598:CDS |
| GCGAGAAGCTGAAGTTGACC+TGG | 0.535925 | 8.1:+7937162 | None:intergenic |
| GAAGTTGACCTGGGATTGAA+TGG | 0.538339 | 8.1:+7937172 | None:intergenic |
| TTTGTTGAAATCAATGGGTG+TGG | 0.553986 | 8.1:-7937330 | MS.gene68598:CDS |
| TGATGTTGATGATGTTAAGC+TGG | 0.558883 | 8.1:-7937195 | MS.gene68598:CDS |
| AGCAATCAATGTGTCCTGAT+CGG | 0.568815 | 8.1:+7936003 | None:intergenic |
| TAAGCTGGCCATTCAATCCC+AGG | 0.581196 | 8.1:-7937180 | MS.gene68598:CDS |
| ATCAATGTGTCCTGATCGGG+TGG | 0.588089 | 8.1:+7936007 | None:intergenic |
| CAGGTGTATTCAGAGCATGC+TGG | 0.605392 | 8.1:-7937230 | MS.gene68598:CDS |
| AGGAAGACTCGAATATGCCA+AGG | 0.607648 | 8.1:-7937373 | MS.gene68598:CDS |
| TGATGTATTAACAGATGCCC+AGG | 0.610415 | 8.1:-7937249 | MS.gene68598:CDS |
| CGAGAAGCTGAAGTTGACCT+GGG | 0.614371 | 8.1:+7937163 | None:intergenic |
| TGAGCTATGGTATCGCTATG+TGG | 0.621181 | 8.1:-7937273 | MS.gene68598:CDS |
| GGAAATGACACTCTTTGATG+GGG | 0.631012 | 8.1:+7935854 | None:intergenic |
| TCGGGTGGAAGTGGAAACCC+AGG | 0.633441 | 8.1:+7936022 | None:intergenic |
| CATAGCGATACCATAGCTCA+AGG | 0.639257 | 8.1:+7937276 | None:intergenic |
| AGGAACTTGTTTATAACACG+AGG | 0.647916 | 8.1:+7937296 | None:intergenic |
| CCTGCTATAGACTTTGGCAA+TGG | 0.651706 | 8.1:+7936046 | None:intergenic |
| AGCATGCTCTGAATACACCT+GGG | 0.665137 | 8.1:+7937232 | None:intergenic |
| CATTGCCAAAGTCTATAGCA+GGG | 0.667332 | 8.1:-7936045 | MS.gene68598:CDS |
| GGAAGACTCGAATATGCCAA+GGG | 0.693042 | 8.1:-7937372 | MS.gene68598:CDS |
| CGAACCTATAGAAGAAACTG+AGG | 0.711331 | 8.1:-7935942 | MS.gene68598:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATTTTTTTATTTTTTTTT+TGG | - | chr8.1:7936385-7936404 | MS.gene68598:intron | 0.0% |
| !! | AAAAATTTACAAATAGTTTA+GGG | + | chr8.1:7936632-7936651 | None:intergenic | 10.0% |
| !! | ATTTATTAGTAATTGTAATT+AGG | - | chr8.1:7936720-7936739 | MS.gene68598:intron | 10.0% |
| !! | TAAAAATTTACAAATAGTTT+AGG | + | chr8.1:7936633-7936652 | None:intergenic | 10.0% |
| !! | TTACAATTACTAATAAATTT+AGG | + | chr8.1:7936718-7936737 | None:intergenic | 10.0% |
| !!! | ATTACAAATATGTTTAATTT+AGG | - | chr8.1:7936997-7937016 | MS.gene68598:intron | 10.0% |
| !!! | ATTACAATTTATTTTAGTTT+AGG | + | chr8.1:7936664-7936683 | None:intergenic | 10.0% |
| !!! | CTATTTGTAAATTTTTAAAT+AGG | - | chr8.1:7936636-7936655 | MS.gene68598:intron | 10.0% |
| !!! | GAAATTATTTTAAGTTTAAA+AGG | - | chr8.1:7936881-7936900 | MS.gene68598:intron | 10.0% |
| !!! | TTACAATTTATTTTAGTTTA+GGG | + | chr8.1:7936663-7936682 | None:intergenic | 10.0% |
| !!! | GAATATTTTTGACAAATATA+GGG | - | chr8.1:7936969-7936988 | MS.gene68598:intron | 15.0% |
| !!! | TGAATATTTTTGACAAATAT+AGG | - | chr8.1:7936968-7936987 | MS.gene68598:intron | 15.0% |
| !!! | TTTAGGTTTAATTATTTTGT+AGG | - | chr8.1:7936605-7936624 | MS.gene68598:intron | 15.0% |
| !! | CAATAAAAAACTTCAGTTTA+AGG | + | chr8.1:7936747-7936766 | None:intergenic | 20.0% |
| !! | TGTTAAAAAAAAAGGGTTTA+AGG | + | chr8.1:7936772-7936791 | None:intergenic | 20.0% |
| !! | TTATTTGAGGATTCTTAAAT+AGG | + | chr8.1:7937025-7937044 | None:intergenic | 20.0% |
| !!! | ACAAACTATTTTAAGGTTTA+AGG | + | chr8.1:7936800-7936819 | None:intergenic | 20.0% |
| !!! | CTTAAACTGAAGTTTTTTAT+TGG | - | chr8.1:7936745-7936764 | MS.gene68598:intron | 20.0% |
| !!! | TTTTTAAGATTCACATGTTT+GGG | - | chr8.1:7936425-7936444 | MS.gene68598:intron | 20.0% |
| !!! | TTTTTTAAGATTCACATGTT+TGG | - | chr8.1:7936424-7936443 | MS.gene68598:intron | 20.0% |
| ! | AAAGATTATTTGAAAGTCCA+GGG | - | chr8.1:7936913-7936932 | MS.gene68598:intron | 25.0% |
| ! | AAGAATCCTCAAATAATTCA+TGG | - | chr8.1:7937029-7937048 | MS.gene68598:intron | 25.0% |
| ! | AATAGATGCATTTAATCCTT+TGG | + | chr8.1:7936179-7936198 | None:intergenic | 25.0% |
| ! | ATAAAAAATATTACCTCACG+AGG | + | chr8.1:7936087-7936106 | None:intergenic | 25.0% |
| ! | CTAGATTAAGAAAATAGTTC+AGG | - | chr8.1:7936937-7936956 | MS.gene68598:intron | 25.0% |
| ! | GTTCATTAAACTATCATGAT+TGG | - | chr8.1:7936228-7936247 | MS.gene68598:intron | 25.0% |
| ! | TAAAAAATATTACCTCACGA+GGG | + | chr8.1:7936086-7936105 | None:intergenic | 25.0% |
| ! | TAAAGATTATTTGAAAGTCC+AGG | - | chr8.1:7936912-7936931 | MS.gene68598:intron | 25.0% |
| ! | TATTAATGTCCCTAAATTCA+AGG | + | chr8.1:7936831-7936850 | None:intergenic | 25.0% |
| !! | GGTAACTACAAACTATTTTA+AGG | + | chr8.1:7936807-7936826 | None:intergenic | 25.0% |
| !!! | AAACCCTTTTTTTTTAACAG+CGG | - | chr8.1:7936773-7936792 | MS.gene68598:intron | 25.0% |
| AAAAAATATTACCTCACGAG+GGG | + | chr8.1:7936085-7936104 | None:intergenic | 30.0% | |
| AACTGCATTACCATAAAAGT+TGG | + | chr8.1:7936332-7936351 | None:intergenic | 30.0% | |
| ACCTAAAGAAAAACAGCATA+TGG | + | chr8.1:7936592-7936611 | None:intergenic | 30.0% | |
| AGAAAAACAGCATATGGTAT+TGG | + | chr8.1:7936586-7936605 | None:intergenic | 30.0% | |
| ATAAATTGTAATCAGATCCC+TGG | - | chr8.1:7936672-7936691 | MS.gene68598:intron | 30.0% | |
| ATTGCTTGTAAAAAAAACCC+AGG | + | chr8.1:7936693-7936712 | None:intergenic | 30.0% | |
| CAGTCTTTGTTGAAATCAAT+GGG | - | chr8.1:7935880-7935899 | MS.gene68598:CDS | 30.0% | |
| CATTCAACATATCATCTTTC+AGG | + | chr8.1:7937099-7937118 | None:intergenic | 30.0% | |
| GAAAAACAGCATATGGTATT+GGG | + | chr8.1:7936585-7936604 | None:intergenic | 30.0% | |
| GTAATGCAGTTCTTTACTAA+TGG | - | chr8.1:7936341-7936360 | MS.gene68598:intron | 30.0% | |
| GTAGTTCCATGAATTATTTG+AGG | + | chr8.1:7937038-7937057 | None:intergenic | 30.0% | |
| TAAATTGTAATCAGATCCCT+GGG | - | chr8.1:7936673-7936692 | MS.gene68598:intron | 30.0% | |
| TAGTTACCTCCTTGAATTTA+GGG | - | chr8.1:7936819-7936838 | MS.gene68598:intron | 30.0% | |
| TTGCTTGTAAAAAAAACCCA+GGG | + | chr8.1:7936692-7936711 | None:intergenic | 30.0% | |
| ! | TATTTTCTTAATCTAGTCCC+TGG | + | chr8.1:7936933-7936952 | None:intergenic | 30.0% |
| !! | GTTGAATGTAATTGCTTTTC+AGG | - | chr8.1:7937111-7937130 | MS.gene68598:intron | 30.0% |
| !!! | ACCATATGCTGTTTTTCTTT+AGG | - | chr8.1:7936588-7936607 | MS.gene68598:intron | 30.0% |
| AAAAATATTACCTCACGAGG+GGG | + | chr8.1:7936084-7936103 | None:intergenic | 35.0% | |
| ACATCATCAACATCAATTGC+AGG | + | chr8.1:7936015-7936034 | None:intergenic | 35.0% | |
| AGATGCATTTAATCCTTTGG+TGG | + | chr8.1:7936176-7936195 | None:intergenic | 35.0% | |
| AGGACCGCTGTTAAAAAAAA+AGG | + | chr8.1:7936780-7936799 | None:intergenic | 35.0% | |
| AGTTCGCAATTCCAAACAAA+AGG | - | chr8.1:7937245-7937264 | MS.gene68598:CDS | 35.0% | |
| CGAAACAAAATCTAACGTTC+AGG | + | chr8.1:7936135-7936154 | None:intergenic | 35.0% | |
| CTGGTAGACAAAATGGATAT+CGG | + | chr8.1:7936511-7936530 | None:intergenic | 35.0% | |
| GATGCATTTAATCCTTTGGT+GGG | + | chr8.1:7936175-7936194 | None:intergenic | 35.0% | |
| GCAGTCTTTGTTGAAATCAA+TGG | - | chr8.1:7935879-7935898 | MS.gene68598:CDS | 35.0% | |
| GGACCGCTGTTAAAAAAAAA+GGG | + | chr8.1:7936779-7936798 | None:intergenic | 35.0% | |
| GTAGTTACCTCCTTGAATTT+AGG | - | chr8.1:7936818-7936837 | MS.gene68598:intron | 35.0% | |
| TAAACAAGTTCCTTGAGCTA+TGG | - | chr8.1:7935929-7935948 | MS.gene68598:CDS | 35.0% | |
| TAATGTCCCTAAATTCAAGG+AGG | + | chr8.1:7936828-7936847 | None:intergenic | 35.0% | |
| TATCTTCTTTCCTCTTCTGT+TGG | - | chr8.1:7936288-7936307 | MS.gene68598:intron | 35.0% | |
| TCATCCTCAGTTTCTTCTAT+AGG | + | chr8.1:7937280-7937299 | None:intergenic | 35.0% | |
| TTTGTTGAAATCAATGGGTG+TGG | - | chr8.1:7935885-7935904 | MS.gene68598:CDS | 35.0% | |
| ! | AGGAACTTGTTTATAACACG+AGG | + | chr8.1:7935922-7935941 | None:intergenic | 35.0% |
| ! | TCTGTTTTCTCTTCTTGAGA+CGG | + | chr8.1:7937328-7937347 | None:intergenic | 35.0% |
| ! | TTCTTGGTCTCCAACTTTTA+TGG | - | chr8.1:7936319-7936338 | MS.gene68598:intron | 35.0% |
| ! | TTGGCAATGGTATTTTGTTG+CGG | + | chr8.1:7937159-7937178 | None:intergenic | 35.0% |
| !! | TGATGTTGATGATGTTAAGC+TGG | - | chr8.1:7936020-7936039 | MS.gene68598:CDS | 35.0% |
| !! | TTTTGTTTGGAATTGCGAAC+TGG | + | chr8.1:7937246-7937265 | None:intergenic | 35.0% |
| AGCAATCAATGTGTCCTGAT+CGG | + | chr8.1:7937215-7937234 | None:intergenic | 40.0% | |
| ATCATCAACAAACCCACCAA+AGG | - | chr8.1:7936160-7936179 | MS.gene68598:intron | 40.0% | |
| ATTGGGTTACATGACACACA+AGG | + | chr8.1:7936568-7936587 | None:intergenic | 40.0% | |
| CATTGCCAAAGTCTATAGCA+GGG | - | chr8.1:7937170-7937189 | MS.gene68598:CDS | 40.0% | |
| CGAACCTATAGAAGAAACTG+AGG | - | chr8.1:7937273-7937292 | MS.gene68598:CDS | 40.0% | |
| GGAAATGACACTCTTTGATG+GGG | + | chr8.1:7937364-7937383 | None:intergenic | 40.0% | |
| GGGAAATGACACTCTTTGAT+GGG | + | chr8.1:7937365-7937384 | None:intergenic | 40.0% | |
| TCATGAGCTGGTAGACAAAA+TGG | + | chr8.1:7936518-7936537 | None:intergenic | 40.0% | |
| TGATGTATTAACAGATGCCC+AGG | - | chr8.1:7935966-7935985 | MS.gene68598:CDS | 40.0% | |
| ! | CTGTTTTCTCTTCTTGAGAC+GGG | + | chr8.1:7937327-7937346 | None:intergenic | 40.0% |
| !! | TTGGTGGGTTTGTTGATGAT+TGG | + | chr8.1:7936160-7936179 | None:intergenic | 40.0% |
| AAAGCTAGAGCCAACAGAAG+AGG | + | chr8.1:7936301-7936320 | None:intergenic | 45.0% | |
| AGGAAGACTCGAATATGCCA+AGG | - | chr8.1:7935842-7935861 | MS.gene68598:CDS | 45.0% | |
| CATAGCGATACCATAGCTCA+AGG | + | chr8.1:7935942-7935961 | None:intergenic | 45.0% | |
| CCAGCTCATGAGTTGTAATC+AGG | - | chr8.1:7936527-7936546 | MS.gene68598:intron | 45.0% | |
| CCATTGCCAAAGTCTATAGC+AGG | - | chr8.1:7937169-7937188 | MS.gene68598:CDS | 45.0% | |
| CCTGATTACAACTCATGAGC+TGG | + | chr8.1:7936530-7936549 | None:intergenic | 45.0% | |
| CCTGCTATAGACTTTGGCAA+TGG | + | chr8.1:7937172-7937191 | None:intergenic | 45.0% | |
| GAAGTTGACCTGGGATTGAA+TGG | + | chr8.1:7936046-7936065 | None:intergenic | 45.0% | |
| GCAATCAATGTGTCCTGATC+GGG | + | chr8.1:7937214-7937233 | None:intergenic | 45.0% | |
| GGAAGACTCGAATATGCCAA+GGG | - | chr8.1:7935843-7935862 | MS.gene68598:CDS | 45.0% | |
| GGAATTGCGAACTGGTAGTT+GGG | + | chr8.1:7937238-7937257 | None:intergenic | 45.0% | |
| GGGGAAATGACACTCTTTGA+TGG | + | chr8.1:7937366-7937385 | None:intergenic | 45.0% | |
| TCACATGTTTGGGCTGAGAT+TGG | - | chr8.1:7936435-7936454 | MS.gene68598:intron | 45.0% | |
| TGAGCTATGGTATCGCTATG+TGG | - | chr8.1:7935942-7935961 | MS.gene68598:CDS | 45.0% | |
| TGCACAATCTTTGCATCCCT+TGG | + | chr8.1:7935862-7935881 | None:intergenic | 45.0% | |
| TGGAATTGCGAACTGGTAGT+TGG | + | chr8.1:7937239-7937258 | None:intergenic | 45.0% | |
| TTTCTCTTCTTGAGACGGGT+TGG | + | chr8.1:7937323-7937342 | None:intergenic | 45.0% | |
| ! | AATCCTTTTGGCGTTTAGGC+AGG | + | chr8.1:7937387-7937406 | None:intergenic | 45.0% |
| ! | AGCATGCTCTGAATACACCT+GGG | + | chr8.1:7935986-7936005 | None:intergenic | 45.0% |
| ! | ATCCTTTTGGCGTTTAGGCA+GGG | + | chr8.1:7937386-7937405 | None:intergenic | 45.0% |
| ! | GGTTCGACAGACCTTTTGTT+TGG | + | chr8.1:7937259-7937278 | None:intergenic | 45.0% |
| ! | TTCTCTTCTTGAGACGGGTT+GGG | + | chr8.1:7937322-7937341 | None:intergenic | 45.0% |
| !! | TCTGTTGGCTCTAGCTTTCT+TGG | - | chr8.1:7936303-7936322 | MS.gene68598:intron | 45.0% |
| !!! | TTTTCAGGTGCTTCTAGAGC+TGG | - | chr8.1:7937126-7937145 | MS.gene68598:intron | 45.0% |
| !!! | AAATTATTTTAAGTTTAAAA+GGG | - | chr8.1:7936882-7936901 | MS.gene68598:intron | 5.0% |
| AATATTACCTCACGAGGGGG+TGG | + | chr8.1:7936081-7936100 | None:intergenic | 50.0% | |
| ATCAATGTGTCCTGATCGGG+TGG | + | chr8.1:7937211-7937230 | None:intergenic | 50.0% | |
| CAAAGTCTATAGCAGGGCCT+GGG | - | chr8.1:7937176-7937195 | MS.gene68598:CDS | 50.0% | |
| CAGGTGTATTCAGAGCATGC+TGG | - | chr8.1:7935985-7936004 | MS.gene68598:CDS | 50.0% | |
| CGAGAAGCTGAAGTTGACCT+GGG | + | chr8.1:7936055-7936074 | None:intergenic | 50.0% | |
| TAAGCTGGCCATTCAATCCC+AGG | - | chr8.1:7936035-7936054 | MS.gene68598:CDS | 50.0% | |
| ! | CAGCATGCTCTGAATACACC+TGG | + | chr8.1:7935987-7936006 | None:intergenic | 50.0% |
| ! | TCCTTTTGGCGTTTAGGCAG+GGG | + | chr8.1:7937385-7937404 | None:intergenic | 50.0% |
| CCAAAGTCTATAGCAGGGCC+TGG | - | chr8.1:7937175-7937194 | MS.gene68598:CDS | 55.0% | |
| CCAGGCCCTGCTATAGACTT+TGG | + | chr8.1:7937178-7937197 | None:intergenic | 55.0% | |
| GCGAGAAGCTGAAGTTGACC+TGG | + | chr8.1:7936056-7936075 | None:intergenic | 55.0% | |
| GTTTCCACTTCCACCCGATC+AGG | - | chr8.1:7937198-7937217 | MS.gene68598:CDS | 55.0% | |
| TCCCCTGCCTAAACGCCAAA+AGG | - | chr8.1:7937381-7937400 | MS.gene68598:CDS | 55.0% | |
| !! | AGACGGGTTGGGATCAGCAT+TGG | + | chr8.1:7937311-7937330 | None:intergenic | 55.0% |
| !! | GACGGGTTGGGATCAGCATT+GGG | + | chr8.1:7937310-7937329 | None:intergenic | 55.0% |
| GTGTCCTGATCGGGTGGAAG+TGG | + | chr8.1:7937205-7937224 | None:intergenic | 60.0% | |
| TCGGGTGGAAGTGGAAACCC+AGG | + | chr8.1:7937196-7937215 | None:intergenic | 60.0% | |
| CTCGCAACCACCCCCTCGTG+AGG | - | chr8.1:7936071-7936090 | MS.gene68598:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 7935829 | 7937408 | 7935829 | ID=MS.gene68598 |
| chr8.1 | mRNA | 7935829 | 7937408 | 7935829 | ID=MS.gene68598.t1;Parent=MS.gene68598 |
| chr8.1 | exon | 7937145 | 7937408 | 7937145 | ID=MS.gene68598.t1.exon1;Parent=MS.gene68598.t1 |
| chr8.1 | CDS | 7937145 | 7937408 | 7937145 | ID=cds.MS.gene68598.t1;Parent=MS.gene68598.t1 |
| chr8.1 | exon | 7935829 | 7936104 | 7935829 | ID=MS.gene68598.t1.exon2;Parent=MS.gene68598.t1 |
| chr8.1 | CDS | 7935829 | 7936104 | 7935829 | ID=cds.MS.gene68598.t1;Parent=MS.gene68598.t1 |
| Gene Sequence |
| Protein sequence |
