Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65289.t1 | XP_003594777.1 | 100 | 114 | 0 | 0 | 1 | 114 | 1 | 114 | 6.30E-64 | 253.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65289.t1 | Q6NLH0 | 88.6 | 114 | 13 | 0 | 1 | 114 | 1 | 114 | 6.2e-60 | 231.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65289.t1 | Q2HU21 | 100.0 | 114 | 0 | 0 | 1 | 114 | 1 | 114 | 4.6e-64 | 253.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049255 | MS.gene65289 | 0.840529 | 8.23E-58 | -1.69E-46 |
| MS.gene050277 | MS.gene65289 | 0.835564 | 1.56E-56 | -1.69E-46 |
| MS.gene055808 | MS.gene65289 | 0.805614 | 1.23E-49 | -1.69E-46 |
| MS.gene056631 | MS.gene65289 | 0.815408 | 9.39E-52 | -1.69E-46 |
| MS.gene057705 | MS.gene65289 | 0.845647 | 3.56E-59 | -1.69E-46 |
| MS.gene06001 | MS.gene65289 | 0.804934 | 1.70E-49 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65289.t1 | MTR_2g034520 | 100.000 | 114 | 0 | 0 | 1 | 114 | 1 | 114 | 2.49e-84 | 241 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65289.t1 | AT3G16980 | 88.596 | 114 | 13 | 0 | 1 | 114 | 1 | 114 | 2.12e-76 | 221 |
| MS.gene65289.t1 | AT4G16265 | 87.719 | 114 | 14 | 0 | 1 | 114 | 1 | 114 | 2.88e-76 | 221 |
| MS.gene65289.t1 | AT4G16265 | 86.538 | 104 | 14 | 0 | 11 | 114 | 30 | 133 | 2.60e-68 | 201 |
Find 25 sgRNAs with CRISPR-Local
Find 129 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTGTTCTCTGTCTTCCTT+AGG | 0.297432 | 2.2:-54527828 | None:intergenic |
| CTCCAGCGGTGCCCACAGTT+TGG | 0.305887 | 2.2:-54530094 | None:intergenic |
| TCCAGCGGTGCCCACAGTTT+GGG | 0.321240 | 2.2:-54530093 | None:intergenic |
| GAACCTGGTGATCGCAATTA+CGG | 0.380587 | 2.2:-54527869 | None:intergenic |
| TGAGCGGACTCAAGTGTTGC+AGG | 0.420762 | 2.2:+54528582 | MS.gene65289:CDS |
| CCATTCACGGCAAAACTTCA+TGG | 0.428840 | 2.2:-54527715 | None:intergenic |
| ACCCAAACTGTGGGCACCGC+TGG | 0.429710 | 2.2:+54530092 | MS.gene65289:CDS |
| TCTGTTCTCTGTCTTCCTTA+GGG | 0.436557 | 2.2:-54527827 | None:intergenic |
| GCCTTGGTGCGAGGAAGAGT+TGG | 0.493325 | 2.2:-54528619 | None:intergenic |
| TTGCCGTAATTGCGATCACC+AGG | 0.509869 | 2.2:+54527866 | MS.gene65289:CDS |
| CGCAATTACGGCAAGCGTAG+AGG | 0.511532 | 2.2:-54527857 | None:intergenic |
| GAGTAGGAACGAACCATTCA+CGG | 0.528356 | 2.2:-54527728 | None:intergenic |
| CGCTGTGTTCAATGCAATCA+TGG | 0.530121 | 2.2:+54528646 | MS.gene65289:CDS |
| TTGAACACAGCGAACAGCCT+TGG | 0.548593 | 2.2:-54528635 | None:intergenic |
| GCAACTGCTAGAGGCGAGGA+AGG | 0.564765 | 2.2:+54530043 | MS.gene65289:CDS |
| GTTTGCTGCAACCCAAACTG+TGG | 0.577890 | 2.2:+54530082 | MS.gene65289:CDS |
| TTTGCTGCAACCCAAACTGT+GGG | 0.598453 | 2.2:+54530083 | MS.gene65289:CDS |
| TAACAACATTCTGTACCCTA+AGG | 0.599627 | 2.2:+54527812 | MS.gene65289:CDS |
| CATATGCAGGCAACTGCTAG+AGG | 0.615188 | 2.2:+54530034 | MS.gene65289:intron |
| CAGCGAACAGCCTTGGTGCG+AGG | 0.628441 | 2.2:-54528628 | None:intergenic |
| GCAGGCAACTGCTAGAGGCG+AGG | 0.653952 | 2.2:+54530039 | MS.gene65289:intron |
| TCCAACTCTTCCTCGCACCA+AGG | 0.666434 | 2.2:+54528618 | MS.gene65289:CDS |
| TTCACCACTCTGTTGCTGAG+CGG | 0.687981 | 2.2:+54528566 | MS.gene65289:CDS |
| GAGTCCGCTCAGCAACAGAG+TGG | 0.694701 | 2.2:-54528570 | None:intergenic |
| ACAAAACTCAGTCTCTCCAG+CGG | 0.698214 | 2.2:-54530108 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTTTTTTTTTTAATTA+GGG | + | chr2.2:54528092-54528111 | MS.gene65289:intron | 0.0% |
| !! | AAAAAAAAAAAAAAACAGAT+TGG | - | chr2.2:54528133-54528152 | None:intergenic | 10.0% |
| !!! | TTATTATATTTTCTTTTTAG+TGG | + | chr2.2:54529403-54529422 | MS.gene65289:intron | 10.0% |
| !!! | TTGTTTTCAAAAAAATATTA+TGG | + | chr2.2:54528340-54528359 | MS.gene65289:intron | 10.0% |
| !!! | TTTTTTTTTTTTTTTGAAGA+TGG | + | chr2.2:54528146-54528165 | MS.gene65289:intron | 10.0% |
| !! | AATTTAGAAAGCAAAAAAAA+TGG | - | chr2.2:54527775-54527794 | None:intergenic | 15.0% |
| !! | ATTTAGAAAGCAAAAAAAAT+GGG | - | chr2.2:54527774-54527793 | None:intergenic | 15.0% |
| !!! | AATTTTCCTTTTTTTTTTTG+TGG | - | chr2.2:54529711-54529730 | None:intergenic | 15.0% |
| !! | AAACCTTATTCTATTACTTA+TGG | + | chr2.2:54529990-54530009 | MS.gene65289:intron | 20.0% |
| !! | AAACTCAAAAAACAGAAAAT+GGG | - | chr2.2:54527938-54527957 | None:intergenic | 20.0% |
| !! | AATTCCAATATGAATTGTTT+AGG | + | chr2.2:54529146-54529165 | MS.gene65289:intron | 20.0% |
| !! | ATTCCAATATGAATTGTTTA+GGG | + | chr2.2:54529147-54529166 | MS.gene65289:intron | 20.0% |
| !! | TAATTAGGGTTTAACAATTA+CGG | + | chr2.2:54528106-54528125 | MS.gene65289:intron | 20.0% |
| !! | TGTTCTAATTTGATCAATTT+AGG | + | chr2.2:54528190-54528209 | MS.gene65289:intron | 20.0% |
| !!! | AATTTTTTATATGCATATGC+AGG | + | chr2.2:54530021-54530040 | MS.gene65289:intron | 20.0% |
| !!! | ATAAGCTACTTTTTAACAAA+AGG | + | chr2.2:54528280-54528299 | MS.gene65289:intron | 20.0% |
| !!! | CTTGAGTTTTATATATTTTG+TGG | + | chr2.2:54528850-54528869 | MS.gene65289:intron | 20.0% |
| !!! | TTGATTTTTAGAAGTTTTGA+AGG | + | chr2.2:54528744-54528763 | MS.gene65289:intron | 20.0% |
| ! | AAAAATGCATTCATAAGAGT+AGG | - | chr2.2:54529942-54529961 | None:intergenic | 25.0% |
| ! | AAAATATTATGGAGAGCTTA+TGG | + | chr2.2:54528351-54528370 | MS.gene65289:intron | 25.0% |
| ! | AAAATGCATTCATAAGAGTA+GGG | - | chr2.2:54529941-54529960 | None:intergenic | 25.0% |
| ! | AAAGCAAAAAAAATGGGTAA+AGG | - | chr2.2:54527768-54527787 | None:intergenic | 25.0% |
| ! | AAGCAAAAAAAATGGGTAAA+GGG | - | chr2.2:54527767-54527786 | None:intergenic | 25.0% |
| ! | CAAACTCAAAAAACAGAAAA+TGG | - | chr2.2:54527939-54527958 | None:intergenic | 25.0% |
| ! | GATCCATAAGTAATAGAATA+AGG | - | chr2.2:54529996-54530015 | None:intergenic | 25.0% |
| ! | GGATAAATAGCTTAATTAAG+TGG | + | chr2.2:54528221-54528240 | MS.gene65289:intron | 25.0% |
| ! | TAACCCTAAACAATTCATAT+TGG | - | chr2.2:54529153-54529172 | None:intergenic | 25.0% |
| ! | TCTTCACCACAAAAAAAAAA+AGG | + | chr2.2:54529702-54529721 | MS.gene65289:intron | 25.0% |
| !! | AAAAAACGTATACGTTTTGA+AGG | + | chr2.2:54528957-54528976 | MS.gene65289:intron | 25.0% |
| !! | TTTTATACACAGTGATGATT+CGG | - | chr2.2:54527909-54527928 | None:intergenic | 25.0% |
| !!! | AGCATTATTAGCTTATTTTG+AGG | + | chr2.2:54528013-54528032 | MS.gene65289:intron | 25.0% |
| !!! | ATTTCTTCATTGCTTTTGAA+AGG | - | chr2.2:54529908-54529927 | None:intergenic | 25.0% |
| !!! | ATTTTGACTTTAAAGTAGAG+TGG | + | chr2.2:54528793-54528812 | MS.gene65289:intron | 25.0% |
| !!! | CATTATTAGCTTATTTTGAG+GGG | + | chr2.2:54528015-54528034 | MS.gene65289:intron | 25.0% |
| !!! | GCATTATTAGCTTATTTTGA+GGG | + | chr2.2:54528014-54528033 | MS.gene65289:intron | 25.0% |
| !!! | TATTGTCGTTATCTTGTTTT+TGG | + | chr2.2:54529258-54529277 | MS.gene65289:intron | 25.0% |
| !!! | TTTCTTCATTGCTTTTGAAA+GGG | - | chr2.2:54529907-54529926 | None:intergenic | 25.0% |
| AAAAGTAATGTGGATATGTC+AGG | + | chr2.2:54529831-54529850 | MS.gene65289:intron | 30.0% | |
| AAGTTATAGAGGGTTTATGA+AGG | + | chr2.2:54528069-54528088 | MS.gene65289:intron | 30.0% | |
| ACAAGATAACGACAATAGAA+AGG | - | chr2.2:54529255-54529274 | None:intergenic | 30.0% | |
| AGAAGTGAATCTTAGAAAGA+AGG | + | chr2.2:54528930-54528949 | MS.gene65289:intron | 30.0% | |
| AGAATGAGTTTACAGCATAT+AGG | - | chr2.2:54529595-54529614 | None:intergenic | 30.0% | |
| ATTCACTTCTTCACAAACTA+AGG | - | chr2.2:54528920-54528939 | None:intergenic | 30.0% | |
| GAATATACGAAGGTTTCATA+GGG | + | chr2.2:54529465-54529484 | MS.gene65289:intron | 30.0% | |
| GGAAATTAAAATAACGAACC+TGG | - | chr2.2:54527887-54527906 | None:intergenic | 30.0% | |
| GTATCTCTCATATGTTGAAT+AGG | + | chr2.2:54529615-54529634 | MS.gene65289:intron | 30.0% | |
| TAGAACCATGAACACTAAAA+TGG | - | chr2.2:54529359-54529378 | None:intergenic | 30.0% | |
| TAGCGTAAATGAATATACGA+AGG | + | chr2.2:54529455-54529474 | MS.gene65289:intron | 30.0% | |
| TCACAAGTACTTATCATAGT+AGG | + | chr2.2:54528438-54528457 | MS.gene65289:intron | 30.0% | |
| TGAATATACGAAGGTTTCAT+AGG | + | chr2.2:54529464-54529483 | MS.gene65289:intron | 30.0% | |
| TTAAGCTATTTATCCCAACA+AGG | - | chr2.2:54528216-54528235 | None:intergenic | 30.0% | |
| TTCACTTCTTCACAAACTAA+GGG | - | chr2.2:54528919-54528938 | None:intergenic | 30.0% | |
| TTTATACACAGTGATGATTC+GGG | - | chr2.2:54527908-54527927 | None:intergenic | 30.0% | |
| TTTGTGGTGAAGAACTAATT+TGG | - | chr2.2:54529695-54529714 | None:intergenic | 30.0% | |
| ! | ATGTTGAATAGGTAACGTTT+TGG | + | chr2.2:54529626-54529645 | MS.gene65289:intron | 30.0% |
| ! | GTAGAGTCATAGGAATTTTA+AGG | + | chr2.2:54528815-54528834 | MS.gene65289:intron | 30.0% |
| ! | TTGTTTGACTAGTTGTTTAC+TGG | + | chr2.2:54528481-54528500 | MS.gene65289:intron | 30.0% |
| ! | TTTAGGGTTATAAAGTGTCA+CGG | + | chr2.2:54529163-54529182 | MS.gene65289:intron | 30.0% |
| !! | AATCTCCATTTTAGTGTTCA+TGG | + | chr2.2:54529351-54529370 | MS.gene65289:intron | 30.0% |
| !! | ATATCCACATTACTTTTAGC+GGG | - | chr2.2:54529828-54529847 | None:intergenic | 30.0% |
| !! | ATTTTAGTGTTCATGGTTCT+AGG | + | chr2.2:54529358-54529377 | MS.gene65289:intron | 30.0% |
| !! | CATATCCACATTACTTTTAG+CGG | - | chr2.2:54529829-54529848 | None:intergenic | 30.0% |
| !! | TTCTTCATTGCTTTTGAAAG+GGG | - | chr2.2:54529906-54529925 | None:intergenic | 30.0% |
| !!! | TGTTGTTGTTTTTGTTGTTC+AGG | + | chr2.2:54528507-54528526 | MS.gene65289:intron | 30.0% |
| AGAAATGTCATTGAGCAACT+TGG | - | chr2.2:54529761-54529780 | None:intergenic | 35.0% | |
| ATGACTATTGCATAGATGCT+AGG | + | chr2.2:54529189-54529208 | MS.gene65289:intron | 35.0% | |
| CAGGTAAAGTTTCTGTTCTA+TGG | + | chr2.2:54528685-54528704 | MS.gene65289:intron | 35.0% | |
| CATAGAACAGAAACTTTACC+TGG | - | chr2.2:54528687-54528706 | None:intergenic | 35.0% | |
| TAACAACATTCTGTACCCTA+AGG | + | chr2.2:54527812-54527831 | MS.gene65289:CDS | 35.0% | |
| TAAGTACTTGTGAAACAGCT+TGG | - | chr2.2:54528431-54528450 | None:intergenic | 35.0% | |
| TGCTATAATCTACAACACTC+AGG | - | chr2.2:54529051-54529070 | None:intergenic | 35.0% | |
| TGTGTATAGTGAGCGAATAA+AGG | - | chr2.2:54529793-54529812 | None:intergenic | 35.0% | |
| ! | ATTTAAAGCTGAACTTGTGG+TGG | - | chr2.2:54529318-54529337 | None:intergenic | 35.0% |
| ! | GACATTTAAAGCTGAACTTG+TGG | - | chr2.2:54529321-54529340 | None:intergenic | 35.0% |
| ! | TTGATCAATTTAGGCCTTGT+TGG | + | chr2.2:54528199-54528218 | MS.gene65289:intron | 35.0% |
| ! | TTGTGTCGCTAAGTTATAGA+GGG | + | chr2.2:54528059-54528078 | MS.gene65289:intron | 35.0% |
| ! | TTTGAAGATGGTGTTGAAAG+AGG | + | chr2.2:54528158-54528177 | MS.gene65289:intron | 35.0% |
| ! | TTTGTGTCGCTAAGTTATAG+AGG | + | chr2.2:54528058-54528077 | MS.gene65289:intron | 35.0% |
| ! | TTTTCATGCTAAGGGATAAG+TGG | + | chr2.2:54528986-54529005 | MS.gene65289:intron | 35.0% |
| !! | CAAGTTCAGCTTTAAATGTC+AGG | + | chr2.2:54529321-54529340 | MS.gene65289:intron | 35.0% |
| !! | TGATCAATTTAGGCCTTGTT+GGG | + | chr2.2:54528200-54528219 | MS.gene65289:intron | 35.0% |
| !!! | AGGAAAGCATTTTCATGCTA+AGG | + | chr2.2:54528977-54528996 | MS.gene65289:intron | 35.0% |
| !!! | GGAAAGCATTTTCATGCTAA+GGG | + | chr2.2:54528978-54528997 | MS.gene65289:intron | 35.0% |
| !!! | TAGAAGTTTTGAAGGAAGAG+AGG | + | chr2.2:54528752-54528771 | MS.gene65289:intron | 35.0% |
| !!! | TGTTGTTTTTGTTGTTCAGG+AGG | + | chr2.2:54528510-54528529 | MS.gene65289:intron | 35.0% |
| AAACAGCTTGGAAGAGCTTA+TGG | - | chr2.2:54528419-54528438 | None:intergenic | 40.0% | |
| AAGTAGAGTGGTAGAGTCAT+AGG | + | chr2.2:54528805-54528824 | MS.gene65289:intron | 40.0% | |
| ACTATTGCATAGATGCTAGG+AGG | + | chr2.2:54529192-54529211 | MS.gene65289:intron | 40.0% | |
| AGTCAAAATCAACAGCGACT+TGG | - | chr2.2:54528782-54528801 | None:intergenic | 40.0% | |
| ATCTACAACACTCAGGTTTG+TGG | - | chr2.2:54529044-54529063 | None:intergenic | 40.0% | |
| GTAATGTGGATATGTCAGGT+AGG | + | chr2.2:54529835-54529854 | MS.gene65289:intron | 40.0% | |
| GTCAAAATCAACAGCGACTT+GGG | - | chr2.2:54528781-54528800 | None:intergenic | 40.0% | |
| TCTACAACACTCAGGTTTGT+GGG | - | chr2.2:54529043-54529062 | None:intergenic | 40.0% | |
| TCTGTTCTCTGTCTTCCTTA+GGG | - | chr2.2:54527830-54527849 | None:intergenic | 40.0% | |
| TTCTGTTCTCTGTCTTCCTT+AGG | - | chr2.2:54527831-54527850 | None:intergenic | 40.0% | |
| CCATAGCTGAACCTAAACAC+TGG | + | chr2.2:54529735-54529754 | MS.gene65289:intron | 45.0% | |
| CCATTCACGGCAAAACTTCA+TGG | - | chr2.2:54527718-54527737 | None:intergenic | 45.0% | |
| CGCTGTGTTCAATGCAATCA+TGG | + | chr2.2:54528646-54528665 | MS.gene65289:CDS | 45.0% | |
| CTGCCAAACTGTTTGACAGA+TGG | - | chr2.2:54529555-54529574 | None:intergenic | 45.0% | |
| GAACCTGGTGATCGCAATTA+CGG | - | chr2.2:54527872-54527891 | None:intergenic | 45.0% | |
| GAGTAGGAACGAACCATTCA+CGG | - | chr2.2:54527731-54527750 | None:intergenic | 45.0% | |
| GCCAGTCTAACTGAGTCATA+GGG | - | chr2.2:54529521-54529540 | None:intergenic | 45.0% | |
| GTGCCATCTGTCAAACAGTT+TGG | + | chr2.2:54529549-54529568 | MS.gene65289:intron | 45.0% | |
| TCCCTATGACTCAGTTAGAC+TGG | + | chr2.2:54529517-54529536 | MS.gene65289:intron | 45.0% | |
| TCTGCCCGCTAAAAGTAATG+TGG | + | chr2.2:54529821-54529840 | MS.gene65289:intron | 45.0% | |
| TGCCAGTCTAACTGAGTCAT+AGG | - | chr2.2:54529522-54529541 | None:intergenic | 45.0% | |
| TTTGCTGCAACCCAAACTGT+GGG | + | chr2.2:54530083-54530102 | MS.gene65289:CDS | 45.0% | |
| ! | CCAGTGTTTAGGTTCAGCTA+TGG | - | chr2.2:54529738-54529757 | None:intergenic | 45.0% |
| ! | CCATGAAGTTTTGCCGTGAA+TGG | + | chr2.2:54527715-54527734 | MS.gene65289:CDS | 45.0% |
| ! | TGGTGAAGCTGTGTTTTTCC+AGG | + | chr2.2:54528666-54528685 | MS.gene65289:CDS | 45.0% |
| !!! | GATTTTTTTTTTTTTTAATT+AGG | + | chr2.2:54528091-54528110 | MS.gene65289:intron | 5.0% |
| CATATGCAGGCAACTGCTAG+AGG | + | chr2.2:54530034-54530053 | MS.gene65289:intron | 50.0% | |
| GAGCAACTTGGCCAGTGTTT+AGG | - | chr2.2:54529749-54529768 | None:intergenic | 50.0% | |
| GGGAAGAAGATGCAGAGAGT+AGG | - | chr2.2:54527747-54527766 | None:intergenic | 50.0% | |
| TTCACCACTCTGTTGCTGAG+CGG | + | chr2.2:54528566-54528585 | MS.gene65289:CDS | 50.0% | |
| TTGAACACAGCGAACAGCCT+TGG | - | chr2.2:54528638-54528657 | None:intergenic | 50.0% | |
| TTGCCGTAATTGCGATCACC+AGG | + | chr2.2:54527866-54527885 | MS.gene65289:CDS | 50.0% | |
| ! | GTTTGCTGCAACCCAAACTG+TGG | + | chr2.2:54530082-54530101 | MS.gene65289:CDS | 50.0% |
| CGCAATTACGGCAAGCGTAG+AGG | - | chr2.2:54527860-54527879 | None:intergenic | 55.0% | |
| TCCAACTCTTCCTCGCACCA+AGG | + | chr2.2:54528618-54528637 | MS.gene65289:CDS | 55.0% | |
| ! | TGAGCGGACTCAAGTGTTGC+AGG | + | chr2.2:54528582-54528601 | MS.gene65289:CDS | 55.0% |
| GAGTCCGCTCAGCAACAGAG+TGG | - | chr2.2:54528573-54528592 | None:intergenic | 60.0% | |
| GCAACTGCTAGAGGCGAGGA+AGG | + | chr2.2:54530043-54530062 | MS.gene65289:CDS | 60.0% | |
| TCCAGCGGTGCCCACAGTTT+GGG | - | chr2.2:54530096-54530115 | None:intergenic | 60.0% | |
| ! | GCCTTGGTGCGAGGAAGAGT+TGG | - | chr2.2:54528622-54528641 | None:intergenic | 60.0% |
| CTCCAGCGGTGCCCACAGTT+TGG | - | chr2.2:54530097-54530116 | None:intergenic | 65.0% | |
| GCAGGCAACTGCTAGAGGCG+AGG | + | chr2.2:54530039-54530058 | MS.gene65289:intron | 65.0% | |
| ! | ACCCAAACTGTGGGCACCGC+TGG | + | chr2.2:54530092-54530111 | MS.gene65289:CDS | 65.0% |
| ! | CAGCGAACAGCCTTGGTGCG+AGG | - | chr2.2:54528631-54528650 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.2 | gene | 54527708 | 54530123 | 54527708 | ID=MS.gene65289 |
| chr2.2 | mRNA | 54527708 | 54530123 | 54527708 | ID=MS.gene65289.t1;Parent=MS.gene65289 |
| chr2.2 | exon | 54527708 | 54527736 | 54527708 | ID=MS.gene65289.t1.exon1;Parent=MS.gene65289.t1 |
| chr2.2 | CDS | 54527708 | 54527736 | 54527708 | ID=cds.MS.gene65289.t1;Parent=MS.gene65289.t1 |
| chr2.2 | exon | 54527812 | 54527887 | 54527812 | ID=MS.gene65289.t1.exon2;Parent=MS.gene65289.t1 |
| chr2.2 | CDS | 54527812 | 54527887 | 54527812 | ID=cds.MS.gene65289.t1;Parent=MS.gene65289.t1 |
| chr2.2 | exon | 54528529 | 54528687 | 54528529 | ID=MS.gene65289.t1.exon3;Parent=MS.gene65289.t1 |
| chr2.2 | CDS | 54528529 | 54528687 | 54528529 | ID=cds.MS.gene65289.t1;Parent=MS.gene65289.t1 |
| chr2.2 | exon | 54530043 | 54530123 | 54530043 | ID=MS.gene65289.t1.exon4;Parent=MS.gene65289.t1 |
| chr2.2 | CDS | 54530043 | 54530123 | 54530043 | ID=cds.MS.gene65289.t1;Parent=MS.gene65289.t1 |
| Gene Sequence |
| Protein sequence |