AlfalfaGEDB | MS.gene56011

M. sativa cultivar XinJiangDaYe / MS.gene56011

KEGG: K03017
GO: GO:0003674 GO:0003676 GO:0005488 GO:0006139 GO:0006351 GO:0006379 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008270 GO:0009058 GO:0009059 GO:0009987 GO:0016070 GO:0016071 GO:0018130 GO:0019438 GO:0032774 GO:0034641 GO:0034645 GO:0034654 GO:0043167 GO:0043169 GO:0043170 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0046483 GO:0046872 GO:0046914 GO:0071704 GO:0090304 GO:0090305 GO:0090501 GO:0097159 GO:0097659 GO:1901360 GO:1901362 GO:1901363 GO:1901576
PFAM: PF01096.21 PF02150.19

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene56011.t1	XP_003594777.1	100	114	0	0	1	114	1	114	6.30E-64	253.1

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene56011.t1	Q6NLH0	88.6	114	13	0	1	114	1	114	6.2e-60	231.1

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene56011.t1	Q2HU21	100.0	114	0	0	1	114	1	114	4.6e-64	253.1

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049580	MS.gene56011	0.833121	6.40E-56	-1.69E-46
MS.gene049825	MS.gene56011	0.802125	6.51E-49	-1.69E-46
MS.gene050277	MS.gene56011	0.853555	2.21E-61	-1.69E-46
MS.gene051903	MS.gene56011	0.847056	1.47E-59	-1.69E-46
MS.gene052286	MS.gene56011	0.804591	2.01E-49	-1.69E-46
MS.gene052947	MS.gene56011	0.82354	1.31E-53	-1.69E-46
MS.gene053952	MS.gene56011	0.802629	5.12E-49	-1.69E-46
MS.gene053995	MS.gene56011	0.800211	1.60E-48	-1.69E-46
MS.gene055808	MS.gene56011	0.802721	4.90E-49	-1.69E-46
MS.gene056091	MS.gene56011	0.804375	2.23E-49	-1.69E-46
MS.gene056631	MS.gene56011	0.836897	7.15E-57	-1.69E-46
MS.gene057094	MS.gene56011	0.809589	1.76E-50	-1.69E-46
MS.gene057234	MS.gene56011	0.819423	1.17E-52	-1.69E-46
MS.gene057705	MS.gene56011	0.856339	3.44E-62	-1.69E-46
MS.gene058238	MS.gene56011	0.808415	3.13E-50	-1.69E-46
MS.gene058906	MS.gene56011	0.803023	4.25E-49	-1.69E-46
MS.gene059898	MS.gene56011	0.807832	4.17E-50	-1.69E-46
MS.gene06001	MS.gene56011	0.851397	9.12E-61	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene54479	MS.gene56011	PPI
MS.gene025949	MS.gene56011	PPI
MS.gene67685	MS.gene56011	PPI
MS.gene56011	MS.gene061229	PPI
MS.gene00182	MS.gene56011	PPI
MS.gene014162	MS.gene56011	PPI
MS.gene65289	MS.gene56011	PPI
MS.gene050602	MS.gene56011	PPI
MS.gene06786	MS.gene56011	PPI
MS.gene90747	MS.gene56011	PPI
MS.gene049411	MS.gene56011	PPI
MS.gene030125	MS.gene56011	PPI
MS.gene92623	MS.gene56011	PPI
MS.gene80957	MS.gene56011	PPI
MS.gene058216	MS.gene56011	PPI
MS.gene036302	MS.gene56011	PPI
MS.gene013441	MS.gene56011	PPI
MS.gene69147	MS.gene56011	PPI
MS.gene04856	MS.gene56011	PPI
MS.gene56011	MS.gene06541	PPI
MS.gene56011	MS.gene26816	PPI
MS.gene027891	MS.gene56011	PPI
MS.gene017939	MS.gene56011	PPI
MS.gene063673	MS.gene56011	PPI
MS.gene68265	MS.gene56011	PPI
MS.gene68598	MS.gene56011	PPI
MS.gene24205	MS.gene56011	PPI
MS.gene27287	MS.gene56011	PPI
MS.gene025602	MS.gene56011	PPI
MS.gene27025	MS.gene56011	PPI
MS.gene021324	MS.gene56011	PPI
MS.gene54903	MS.gene56011	PPI
MS.gene64820	MS.gene56011	PPI
MS.gene024486	MS.gene56011	PPI
MS.gene22836	MS.gene56011	PPI
MS.gene34548	MS.gene56011	PPI
MS.gene67503	MS.gene56011	PPI
MS.gene072357	MS.gene56011	PPI
MS.gene38651	MS.gene56011	PPI
MS.gene90078	MS.gene56011	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene56011.t1	MTR_2g034520	100.000	114	0	0	1	114	1	114	2.49e-84	241

Query id	Subject id	identity %	alignment length	mismatches	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene56011.t1	AT3G16980	88.596	114	13	1	114	1	114	2.12e-76	221
MS.gene56011.t1	AT4G16265	87.719	114	14	1	114	1	114	2.88e-76	221
MS.gene56011.t1	AT4G16265	86.538	104	14	11	114	30	133	2.60e-68	201

Find 25 sgRNAs with CRISPR-Local

Find 129 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTCTGTTCTCTGTCTTCCTT+AGG	0.297432	2.3:-56306015	None:intergenic
CTCCAGCGGTGCCCACAGTT+TGG	0.305887	2.3:-56308274	None:intergenic
TCCAGCGGTGCCCACAGTTT+GGG	0.321240	2.3:-56308273	None:intergenic
GAACCTGGTGATCGCAATTA+CGG	0.380587	2.3:-56306056	None:intergenic
TGAGCGGACTCAAGTGTTGC+AGG	0.420762	2.3:+56306762	MS.gene56011:CDS
CCATTCACGGCAAAACTTCA+TGG	0.428840	2.3:-56305901	None:intergenic
ACCCAAACTGTGGGCACCGC+TGG	0.429710	2.3:+56308272	MS.gene56011:CDS
TCTGTTCTCTGTCTTCCTTA+GGG	0.436557	2.3:-56306014	None:intergenic
GAGTAGAAACGAACCATTCA+CGG	0.485823	2.3:-56305914	None:intergenic
GCCTTGGTGCGAGGAAGAGT+TGG	0.493325	2.3:-56306799	None:intergenic
TTGCCGTAATTGCGATCACC+AGG	0.509869	2.3:+56306053	MS.gene56011:CDS
CGCAATTACGGCAAGCGTAG+AGG	0.511532	2.3:-56306044	None:intergenic
CGCTGTGTTCAATGCAATCA+TGG	0.530121	2.3:+56306826	MS.gene56011:CDS
TTGAACACAGCGAACAGCCT+TGG	0.548593	2.3:-56306815	None:intergenic
GCAACTGCTAGAGGCGAGGA+AGG	0.564765	2.3:+56308223	MS.gene56011:CDS
GTTTGCTGCAACCCAAACTG+TGG	0.577890	2.3:+56308262	MS.gene56011:CDS
TAACAACATTCTATACCCTA+AGG	0.583949	2.3:+56305999	MS.gene56011:CDS
TTTGCTGCAACCCAAACTGT+GGG	0.598453	2.3:+56308263	MS.gene56011:CDS
CATATGCAGGCAACTGCTAG+AGG	0.615188	2.3:+56308214	MS.gene56011:intron
CAGCGAACAGCCTTGGTGCG+AGG	0.628441	2.3:-56306808	None:intergenic
GCAGGCAACTGCTAGAGGCG+AGG	0.653952	2.3:+56308219	MS.gene56011:intron
TCCAACTCTTCCTCGCACCA+AGG	0.666434	2.3:+56306798	MS.gene56011:CDS
TTCACCACTCTGTTGCTGAG+CGG	0.687981	2.3:+56306746	MS.gene56011:CDS
GAGTCCGCTCAGCAACAGAG+TGG	0.694701	2.3:-56306750	None:intergenic
ACAAAACTCAGTCTCTCCAG+CGG	0.698214	2.3:-56308288	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	AAATTAATTTTTTTAAAATT+AGG	+	chr2.3:56306272-56306291	MS.gene56011:intron	0.0%
!!!	AATTAATTTTTTTAAAATTA+GGG	+	chr2.3:56306273-56306292	MS.gene56011:intron	0.0%
!!!	TTATTATATTTTCTTTTTAG+TGG	+	chr2.3:56307583-56307602	MS.gene56011:intron	10.0%
!!!	TTGTTTTCAAAAAAATATTA+TGG	+	chr2.3:56306520-56306539	MS.gene56011:intron	10.0%
!!	AAACTCAAAAAACAAAAAAT+GGG	-	chr2.3:56306125-56306144	None:intergenic	15.0%
!!	AATAAAAAAAAATGGGTAAA+AGG	-	chr2.3:56305954-56305973	None:intergenic	15.0%
!!	ATAAAAAAAAATGGGTAAAA+GGG	-	chr2.3:56305953-56305972	None:intergenic	15.0%
!!!	AATTTTCCTTTTTTTTTTTG+TGG	-	chr2.3:56307891-56307910	None:intergenic	15.0%
!!!	TTTGTTTTTTTTTTTGAAGA+TGG	+	chr2.3:56306326-56306345	MS.gene56011:intron	15.0%
!!	AAACCTTATTCTATTACTTA+TGG	+	chr2.3:56308170-56308189	MS.gene56011:intron	20.0%
!!	AAATTAGGGTTTAACAATTA+TGG	+	chr2.3:56306287-56306306	MS.gene56011:intron	20.0%
!!	AACTCAAAAAACAAAAAATG+GGG	-	chr2.3:56306124-56306143	None:intergenic	20.0%
!!	AATTAGGGTTTAACAATTAT+GGG	+	chr2.3:56306288-56306307	MS.gene56011:intron	20.0%
!!	AATTCCAATATGAATTGTTT+AGG	+	chr2.3:56307326-56307345	MS.gene56011:intron	20.0%
!!	ATTCCAATATGAATTGTTTA+GGG	+	chr2.3:56307327-56307346	MS.gene56011:intron	20.0%
!!	CAAACTCAAAAAACAAAAAA+TGG	-	chr2.3:56306126-56306145	None:intergenic	20.0%
!!	TGTTCTAATTTGATCAATTT+AGG	+	chr2.3:56306370-56306389	MS.gene56011:intron	20.0%
!!!	AATTTTTTATATGCATATGC+AGG	+	chr2.3:56308201-56308220	MS.gene56011:intron	20.0%
!!!	ATAAGCTACTTTTTAACAAA+AGG	+	chr2.3:56306460-56306479	MS.gene56011:intron	20.0%
!!!	CATTTTTTGTTTTTTGAGTT+TGG	+	chr2.3:56306124-56306143	MS.gene56011:intron	20.0%
!!!	CTTGAGTTTTATATATTTTG+TGG	+	chr2.3:56307030-56307049	MS.gene56011:intron	20.0%
!!!	TTGATTTTTAGAAGTTTTGA+AGG	+	chr2.3:56306924-56306943	MS.gene56011:intron	20.0%
!	AAAAATGCATTCATAAGAGT+AGG	-	chr2.3:56308122-56308141	None:intergenic	25.0%
!	AAAATATTATGGAGAGCTTA+TGG	+	chr2.3:56306531-56306550	MS.gene56011:intron	25.0%
!	AAAATGCATTCATAAGAGTA+GGG	-	chr2.3:56308121-56308140	None:intergenic	25.0%
!	GATCCATAAGTAATAGAATA+AGG	-	chr2.3:56308176-56308195	None:intergenic	25.0%
!	GGATAAATAGCTTAATTAAG+TGG	+	chr2.3:56306401-56306420	MS.gene56011:intron	25.0%
!	TAACCCTAAACAATTCATAT+TGG	-	chr2.3:56307333-56307352	None:intergenic	25.0%
!	TCTTCACCACAAAAAAAAAA+AGG	+	chr2.3:56307882-56307901	MS.gene56011:intron	25.0%
!!	AAAAAACGTATACGTTTTGA+AGG	+	chr2.3:56307137-56307156	MS.gene56011:intron	25.0%
!!!	ATGGGGTTTTTTTTTATACA+CGG	-	chr2.3:56306107-56306126	None:intergenic	25.0%
!!!	ATTTCTTCATTGCTTTTGAA+AGG	-	chr2.3:56308088-56308107	None:intergenic	25.0%
!!!	ATTTTGACTTTAAAGTAGAG+TGG	+	chr2.3:56306973-56306992	MS.gene56011:intron	25.0%
!!!	CATTATTAGCTTATTTTGAG+TGG	+	chr2.3:56306200-56306219	MS.gene56011:intron	25.0%
!!!	TATTGTCGTTATCTTGTTTT+TGG	+	chr2.3:56307438-56307457	MS.gene56011:intron	25.0%
!!!	TTTCTTCATTGCTTTTGAAA+GGG	-	chr2.3:56308087-56308106	None:intergenic	25.0%
	AAAAGTAATGTGGATATGTC+AGG	+	chr2.3:56308011-56308030	MS.gene56011:intron	30.0%
	ACAAGATAACGACAATAGAA+AGG	-	chr2.3:56307435-56307454	None:intergenic	30.0%
	AGAAGTGAATCTTAGAAAGA+AGG	+	chr2.3:56307110-56307129	MS.gene56011:intron	30.0%
	AGAATGAGTTTACAGCATAT+AGG	-	chr2.3:56307775-56307794	None:intergenic	30.0%
	ATTCACTTCTTCACAAACTA+AGG	-	chr2.3:56307100-56307119	None:intergenic	30.0%
	CATAGAAAAGAAACTTTACC+TGG	-	chr2.3:56306867-56306886	None:intergenic	30.0%
	GAATATACGAAGGTTTCATA+GGG	+	chr2.3:56307645-56307664	MS.gene56011:intron	30.0%
	GTATCTCTCATATGTTGAAT+AGG	+	chr2.3:56307795-56307814	MS.gene56011:intron	30.0%
	TAACAACATTCTATACCCTA+AGG	+	chr2.3:56305999-56306018	MS.gene56011:CDS	30.0%
	TAGAACCATGAACACTAAAA+TGG	-	chr2.3:56307539-56307558	None:intergenic	30.0%
	TAGCGTAAATGAATATACGA+AGG	+	chr2.3:56307635-56307654	MS.gene56011:intron	30.0%
	TCACAAGTACTTATCATAGT+AGG	+	chr2.3:56306618-56306637	MS.gene56011:intron	30.0%
	TGAATATACGAAGGTTTCAT+AGG	+	chr2.3:56307644-56307663	MS.gene56011:intron	30.0%
	TTAAGCTATTTATCCCAACA+AGG	-	chr2.3:56306396-56306415	None:intergenic	30.0%
	TTCACTTCTTCACAAACTAA+GGG	-	chr2.3:56307099-56307118	None:intergenic	30.0%
	TTTATACACGGCAATGATTT+GGG	-	chr2.3:56306095-56306114	None:intergenic	30.0%
	TTTGTGGTGAAGAACTAATT+TGG	-	chr2.3:56307875-56307894	None:intergenic	30.0%
!	ATGTTGAATAGGTAACGTTT+TGG	+	chr2.3:56307806-56307825	MS.gene56011:intron	30.0%
!	CAGGTAAAGTTTCTTTTCTA+TGG	+	chr2.3:56306865-56306884	MS.gene56011:intron	30.0%
!	GTAGAGTCATAGGAATTTTA+AGG	+	chr2.3:56306995-56307014	MS.gene56011:intron	30.0%
!	TTGTTTGACTAGTTGTTTAC+TGG	+	chr2.3:56306661-56306680	MS.gene56011:intron	30.0%
!	TTTAGGGTTATAAAGTGTCA+CGG	+	chr2.3:56307343-56307362	MS.gene56011:intron	30.0%
!	TTTTATACACGGCAATGATT+TGG	-	chr2.3:56306096-56306115	None:intergenic	30.0%
!!	AATCTCCATTTTAGTGTTCA+TGG	+	chr2.3:56307531-56307550	MS.gene56011:intron	30.0%
!!	ATATCCACATTACTTTTAGC+GGG	-	chr2.3:56308008-56308027	None:intergenic	30.0%
!!	ATTTTAGTGTTCATGGTTCT+AGG	+	chr2.3:56307538-56307557	MS.gene56011:intron	30.0%
!!	CATATCCACATTACTTTTAG+CGG	-	chr2.3:56308009-56308028	None:intergenic	30.0%
!!	TTCTTCATTGCTTTTGAAAG+GGG	-	chr2.3:56308086-56308105	None:intergenic	30.0%
!!	TTTTGTGTTGCTAAGTTAGA+GGG	+	chr2.3:56306235-56306254	MS.gene56011:intron	30.0%
!!!	TGTTGTTGTTTTTGTTGTTC+AGG	+	chr2.3:56306687-56306706	MS.gene56011:intron	30.0%
	AGAAATGTCATTGAGCAACT+TGG	-	chr2.3:56307941-56307960	None:intergenic	35.0%
	ATGACTATTGCATAGATGCT+AGG	+	chr2.3:56307369-56307388	MS.gene56011:intron	35.0%
	CTAAGTTAGAGGGTTTATGA+AGG	+	chr2.3:56306245-56306264	MS.gene56011:intron	35.0%
	GGAAATTGAAATAACGAACC+TGG	-	chr2.3:56306074-56306093	None:intergenic	35.0%
	TAAGTACTTGTGAAACAGCT+TGG	-	chr2.3:56306611-56306630	None:intergenic	35.0%
	TGCTATAATCTACAACACTC+AGG	-	chr2.3:56307231-56307250	None:intergenic	35.0%
	TGTGTATAGTGAGCGAATAA+AGG	-	chr2.3:56307973-56307992	None:intergenic	35.0%
!	ATTTAAAGCTGAACTTGTGG+TGG	-	chr2.3:56307498-56307517	None:intergenic	35.0%
!	GACATTTAAAGCTGAACTTG+TGG	-	chr2.3:56307501-56307520	None:intergenic	35.0%
!	TTGATCAATTTAGGCCTTGT+TGG	+	chr2.3:56306379-56306398	MS.gene56011:intron	35.0%
!	TTTGAAGATGGTGTTGAAAG+AGG	+	chr2.3:56306338-56306357	MS.gene56011:intron	35.0%
!	TTTTCATGCTAAGGGATAAG+TGG	+	chr2.3:56307166-56307185	MS.gene56011:intron	35.0%
!!	CAAGTTCAGCTTTAAATGTC+AGG	+	chr2.3:56307501-56307520	MS.gene56011:intron	35.0%
!!	CTTTTGTGTTGCTAAGTTAG+AGG	+	chr2.3:56306234-56306253	MS.gene56011:intron	35.0%
!!	TGATCAATTTAGGCCTTGTT+GGG	+	chr2.3:56306380-56306399	MS.gene56011:intron	35.0%
!!!	AGGAAAGCATTTTCATGCTA+AGG	+	chr2.3:56307157-56307176	MS.gene56011:intron	35.0%
!!!	GGAAAGCATTTTCATGCTAA+GGG	+	chr2.3:56307158-56307177	MS.gene56011:intron	35.0%
!!!	TAGAAGTTTTGAAGGAAGAG+AGG	+	chr2.3:56306932-56306951	MS.gene56011:intron	35.0%
!!!	TGTTGTTTTTGTTGTTCAGG+AGG	+	chr2.3:56306690-56306709	MS.gene56011:intron	35.0%
	AAACAGCTTGGAAGAGCTTA+TGG	-	chr2.3:56306599-56306618	None:intergenic	40.0%
	AAGTAGAGTGGTAGAGTCAT+AGG	+	chr2.3:56306985-56307004	MS.gene56011:intron	40.0%
	ACTATTGCATAGATGCTAGG+AGG	+	chr2.3:56307372-56307391	MS.gene56011:intron	40.0%
	AGTCAAAATCAACAGCGACT+TGG	-	chr2.3:56306962-56306981	None:intergenic	40.0%
	ATCTACAACACTCAGGTTTG+TGG	-	chr2.3:56307224-56307243	None:intergenic	40.0%
	GAGTAGAAACGAACCATTCA+CGG	-	chr2.3:56305917-56305936	None:intergenic	40.0%
	GTAATGTGGATATGTCAGGT+AGG	+	chr2.3:56308015-56308034	MS.gene56011:intron	40.0%
	GTCAAAATCAACAGCGACTT+GGG	-	chr2.3:56306961-56306980	None:intergenic	40.0%
	TCTACAACACTCAGGTTTGT+GGG	-	chr2.3:56307223-56307242	None:intergenic	40.0%
	TCTGTTCTCTGTCTTCCTTA+GGG	-	chr2.3:56306017-56306036	None:intergenic	40.0%
	TTCTGTTCTCTGTCTTCCTT+AGG	-	chr2.3:56306018-56306037	None:intergenic	40.0%
	CCATAGCTGAACCTAAACAC+TGG	+	chr2.3:56307915-56307934	MS.gene56011:intron	45.0%
	CCATTCACGGCAAAACTTCA+TGG	-	chr2.3:56305904-56305923	None:intergenic	45.0%
	CGCTGTGTTCAATGCAATCA+TGG	+	chr2.3:56306826-56306845	MS.gene56011:CDS	45.0%
	CTGCCAAACTGTTTGACAGA+TGG	-	chr2.3:56307735-56307754	None:intergenic	45.0%
	GAACCTGGTGATCGCAATTA+CGG	-	chr2.3:56306059-56306078	None:intergenic	45.0%
	GCCAGTCTAACTGAGTCATA+GGG	-	chr2.3:56307701-56307720	None:intergenic	45.0%
	GTGCCATCTGTCAAACAGTT+TGG	+	chr2.3:56307729-56307748	MS.gene56011:intron	45.0%
	TCCCTATGACTCAGTTAGAC+TGG	+	chr2.3:56307697-56307716	MS.gene56011:intron	45.0%
	TCTGCCCGCTAAAAGTAATG+TGG	+	chr2.3:56308001-56308020	MS.gene56011:intron	45.0%
	TGCCAGTCTAACTGAGTCAT+AGG	-	chr2.3:56307702-56307721	None:intergenic	45.0%
	TTTGCTGCAACCCAAACTGT+GGG	+	chr2.3:56308263-56308282	MS.gene56011:CDS	45.0%
!	CCAGTGTTTAGGTTCAGCTA+TGG	-	chr2.3:56307918-56307937	None:intergenic	45.0%
!	CCATGAAGTTTTGCCGTGAA+TGG	+	chr2.3:56305901-56305920	MS.gene56011:CDS	45.0%
!	TGGTGAAGCTGTGTTTTTCC+AGG	+	chr2.3:56306846-56306865	MS.gene56011:CDS	45.0%
!!	AATTTAGAAATAAAAAAAAA+TGG	-	chr2.3:56305962-56305981	None:intergenic	5.0%
!!	ATTTAGAAATAAAAAAAAAT+GGG	-	chr2.3:56305961-56305980	None:intergenic	5.0%
	CATATGCAGGCAACTGCTAG+AGG	+	chr2.3:56308214-56308233	MS.gene56011:intron	50.0%
	GAGCAACTTGGCCAGTGTTT+AGG	-	chr2.3:56307929-56307948	None:intergenic	50.0%
	TTCACCACTCTGTTGCTGAG+CGG	+	chr2.3:56306746-56306765	MS.gene56011:CDS	50.0%
	TTGAACACAGCGAACAGCCT+TGG	-	chr2.3:56306818-56306837	None:intergenic	50.0%
	TTGCCGTAATTGCGATCACC+AGG	+	chr2.3:56306053-56306072	MS.gene56011:CDS	50.0%
!	GTTTGCTGCAACCCAAACTG+TGG	+	chr2.3:56308262-56308281	MS.gene56011:CDS	50.0%
	CGCAATTACGGCAAGCGTAG+AGG	-	chr2.3:56306047-56306066	None:intergenic	55.0%
	TCCAACTCTTCCTCGCACCA+AGG	+	chr2.3:56306798-56306817	MS.gene56011:CDS	55.0%
!	TGAGCGGACTCAAGTGTTGC+AGG	+	chr2.3:56306762-56306781	MS.gene56011:CDS	55.0%
	GAGTCCGCTCAGCAACAGAG+TGG	-	chr2.3:56306753-56306772	None:intergenic	60.0%
	GCAACTGCTAGAGGCGAGGA+AGG	+	chr2.3:56308223-56308242	MS.gene56011:CDS	60.0%
	TCCAGCGGTGCCCACAGTTT+GGG	-	chr2.3:56308276-56308295	None:intergenic	60.0%
!	GCCTTGGTGCGAGGAAGAGT+TGG	-	chr2.3:56306802-56306821	None:intergenic	60.0%
	CTCCAGCGGTGCCCACAGTT+TGG	-	chr2.3:56308277-56308296	None:intergenic	65.0%
	GCAGGCAACTGCTAGAGGCG+AGG	+	chr2.3:56308219-56308238	MS.gene56011:intron	65.0%
!	ACCCAAACTGTGGGCACCGC+TGG	+	chr2.3:56308272-56308291	MS.gene56011:CDS	65.0%
!	CAGCGAACAGCCTTGGTGCG+AGG	-	chr2.3:56306811-56306830	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr2.3	gene	56305894	56308303	56305894	ID=MS.gene56011
chr2.3	mRNA	56305894	56308303	56305894	ID=MS.gene56011.t1;Parent=MS.gene56011
chr2.3	exon	56305894	56305922	56305894	ID=MS.gene56011.t1.exon1;Parent=MS.gene56011.t1
chr2.3	CDS	56305894	56305922	56305894	ID=cds.MS.gene56011.t1;Parent=MS.gene56011.t1
chr2.3	exon	56305999	56306074	56305999	ID=MS.gene56011.t1.exon2;Parent=MS.gene56011.t1
chr2.3	CDS	56305999	56306074	56305999	ID=cds.MS.gene56011.t1;Parent=MS.gene56011.t1
chr2.3	exon	56306709	56306867	56306709	ID=MS.gene56011.t1.exon3;Parent=MS.gene56011.t1
chr2.3	CDS	56306709	56306867	56306709	ID=cds.MS.gene56011.t1;Parent=MS.gene56011.t1
chr2.3	exon	56308223	56308303	56308223	ID=MS.gene56011.t1.exon4;Parent=MS.gene56011.t1
chr2.3	CDS	56308223	56308303	56308223	ID=cds.MS.gene56011.t1;Parent=MS.gene56011.t1

Gene Sequence

>MS.gene56011

ATGAGTACCATGAAGTTTTGCCGTGAATGGTTCGTTTCTACTCTCTTCATCTTCTTCCCTTTTACCCATTTTTTTTTATTTCTAAATTGAATTTGTTTGATTCAGTAACAACATTCTATACCCTAAGGAAGACAGAGAACAGAAAATTCTCCTCTACGCTTGCCGTAATTGCGATCACCAGGTTCGTTATTTCAATTTCCCAAATCATTGCCGTGTATAAAAAAAAACCCCATTTTTTGTTTTTTGAGTTTGGTTTGAAATTTTTATTTTTTTCTTTAAGTTTCTGATATTTTAAGTGCGTTTCAGCATTATTAGCTTATTTTGAGTGGATTTTTTTTTTCTTTTGTGTTGCTAAGTTAGAGGGTTTATGAAGGAAAAAAATTAATTTTTTTAAAATTAGGGTTTAACAATTATGGGTCAATCTGTTTTTTTTTTGTTTTTTTTTTTGAAGATGGTGTTGAAAGAGGTCATTTTCTTGTTCTAATTTGATCAATTTAGGCCTTGTTGGGATAAATAGCTTAATTAAGTGGTTATAGTATAAACATTTATCATGTAAGTGCTTTTGTATAAGCTACTTTTTAACAAAAGGTACAATAAAGTTAAAGTGTTTTCATGTATGTTATAAGTTGTTTTCAAAAAAATATTATGGAGAGCTTATGGAAATAAGCTGAAAGTAATTTATAGACATGTTATAAGCTGTTTCCATAAGCTCTTCCAAGCTGTTTCACAAGTACTTATCATAGTAGGCAAGCTTATATGACATATGCTTGTTTGACTAGTTGTTTACTGGTTGTGTTGTTGTTTTTGTTGTTCAGGAGGCAGCTGATAACTTCTGTGTCTACAGAAATGAGATTCACCACTCTGTTGCTGAGCGGACTCAAGTGTTGCAGGATGTAGCTGCAGATCCAACTCTTCCTCGCACCAAGGCTGTTCGCTGTGTTCAATGCAATCATGGTGAAGCTGTGTTTTTCCAGGTAAAGTTTCTTTTCTATGGCACTAAAGAGCTGCTTTTTATTTTCGTTTTGTATTTTTGATTTTTAGAAGTTTTGAAGGAAGAGAGGTTTCCCAAGTCGCTGTTGATTTTGACTTTAAAGTAGAGTGGTAGAGTCATAGGAATTTTAAGGACACTTGTGATTCTTGAGTTTTATATATTTTGTGGAAGTAATACACTAATTAGCATTATCGATCTTTCTACTTTCACTCCCTTAGTTTGTGAAGAAGTGAATCTTAGAAAGAAGGCAAGAAAAAACGTATACGTTTTGAAGGAAAGCATTTTCATGCTAAGGGATAAGTGGTGAATGAAAATATGAAATGTTTGTAACTCAACCCACAAACCTGAGTGTTGTAGATTATAGCATATGTTTGAGTCTTGACTATTTGATAGTGTGTAAAAGTGTGCAGATATTATGTTTTTCTGCTGCTTAAGTTATCAAATTCCAATATGAATTGTTTAGGGTTATAAAGTGTCACGGATCATGACTATTGCATAGATGCTAGGAGGCATGTGAGTTGTTGCATAGATCACACATGCTTGAAAACCTTTCTATTGTCGTTATCTTGTTTTTGGTGCGATGACATTCATTAGCTAGTGTATCTGTCTGCCACCACAAGTTCAGCTTTAAATGTCAGGAAGCTGCAATCTCCATTTTAGTGTTCATGGTTCTAGGCAGATTGTTGCAATGCATAAACTTATTATATTTTCTTTTTAGTGGCAAAATTTCTTGACATGCAGTACTGTCATTAGCGTAAATGAATATACGAAGGTTTCATAGGGTGTATGCAAGCTCTTTGTAACTAGTGTGCTCCCTATGACTCAGTTAGACTGGCAGCAGCTTGTGCCATCTGTCAAACAGTTTGGCAGAATTGTATCTGCAGCATCCTATATGCTGTAAACTCATTCTGTATCTCTCATATGTTGAATAGGTAACGTTTTGGACATTTGATTTTATGCAAGTTACTTTCTTTTCTTGTTCAAATACCAAATTAGTTCTTCACCACAAAAAAAAAAAGGAAAATTAGTTCCATAGCTGAACCTAAACACTGGCCAAGTTGCTCAATGACATTTCTATACTCTAACCTTTATTCGCTCACTATACACACATTTCTATCTGCCCGCTAAAAGTAATGTGGATATGTCAGGTAGGTGAAAGAAGTTTCAGTGTAAACTTCTGATTTTGAAAAGTTATGCTCCCCTTTCAAAAGCAATGAAGAAATAAGCATTATTCCCTACTCTTATGAATGCATTTTTAGCAAATATCAAGCAGCATGTTGATCAGAAACCTTATTCTATTACTTATGGATCATCTGAATTTTTTATATGCATATGCAGGCAACTGCTAGAGGCGAGGAAGGAATGACACTTTTCTTCGTTTGCTGCAACCCAAACTGTGGGCACCGCTGGAGAGACTGA

Protein sequence

>MS.gene56011.t1

MSTMKFCRECNNILYPKEDREQKILLYACRNCDHQEAADNFCVYRNEIHHSVAERTQVLQDVAADPTLPRTKAVRCVQCNHGEAVFFQATARGEEGMTLFFVCCNPNCGHRWRD