AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene70575

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene70575.t1 MTR_3g078730 88.811 572 37 1 1 572 1 545 0.0 1029
MS.gene70575.t1 MTR_3g078740 78.356 596 104 3 1 572 1 595 0.0 971
MS.gene70575.t1 MTR_3g078700 79.859 566 86 2 1 565 1 539 0.0 935
MS.gene70575.t1 MTR_8g091390 50.893 560 257 6 17 569 26 574 0.0 577
MS.gene70575.t1 MTR_5g020620 32.332 566 327 17 1 544 8 539 2.07e-75 250
MS.gene70575.t1 MTR_5g083360 31.196 577 332 20 1 544 1 545 6.15e-71 238
MS.gene70575.t1 MTR_7g062250 31.964 560 310 16 18 540 27 552 9.66e-71 238
MS.gene70575.t1 MTR_7g058690 31.217 567 335 14 7 542 14 556 9.55e-70 235
MS.gene70575.t1 MTR_5g069680 33.031 551 318 17 16 545 17 537 1.85e-69 234
MS.gene70575.t1 MTR_5g020600 30.634 568 338 17 2 545 10 545 2.07e-68 231
MS.gene70575.t1 MTR_7g060460 31.699 571 335 17 2 540 8 555 2.71e-68 231
MS.gene70575.t1 MTR_7g458880 30.998 571 333 17 4 540 11 554 4.37e-68 231
MS.gene70575.t1 MTR_4g064530 31.973 588 311 26 3 540 11 559 1.08e-67 230
MS.gene70575.t1 MTR_2g008330 31.349 571 326 20 6 544 21 557 2.24e-66 226
MS.gene70575.t1 MTR_3g101635 30.435 575 336 18 1 544 3 544 3.67e-66 225
MS.gene70575.t1 MTR_3g462760 32.468 539 321 15 22 544 23 534 1.10e-65 224
MS.gene70575.t1 MTR_5g073210 31.083 563 335 20 4 541 1 535 2.15e-65 223
MS.gene70575.t1 MTR_4g015120 30.952 546 329 16 19 544 18 535 5.12e-65 222
MS.gene70575.t1 MTR_5g081810 31.879 527 312 14 36 544 10 507 2.24e-64 220
MS.gene70575.t1 MTR_3g101640 31.034 580 333 21 1 544 1 549 3.48e-64 220
MS.gene70575.t1 MTR_7g062310 31.294 572 326 17 21 555 43 584 1.13e-63 219
MS.gene70575.t1 MTR_3g071890 30.703 583 328 23 2 552 12 550 5.21e-61 212
MS.gene70575.t1 MTR_4g064530 31.315 578 308 26 3 530 11 549 7.47e-61 211
MS.gene70575.t1 MTR_8g027375 29.749 558 312 21 25 544 34 549 8.32e-58 203
MS.gene70575.t1 MTR_7g065980 28.141 597 351 23 7 562 3 562 3.50e-54 193
MS.gene70575.t1 MTR_8g479390 28.905 557 330 19 25 565 31 537 3.06e-53 190
MS.gene70575.t1 MTR_4g019225 28.187 557 333 19 24 544 25 550 1.28e-52 189
MS.gene70575.t1 MTR_7g065970 27.846 571 328 23 18 544 18 548 2.45e-52 188
MS.gene70575.t1 MTR_5g018270 29.084 557 320 18 25 562 31 531 3.13e-49 179
MS.gene70575.t1 MTR_3g079660 77.320 97 22 0 476 572 5 101 1.20e-48 164
MS.gene70575.t1 MTR_3g083390 27.224 562 343 18 26 567 26 541 1.35e-48 177
MS.gene70575.t1 MTR_3g083440 27.224 562 343 18 26 567 26 541 1.48e-48 177
MS.gene70575.t1 MTR_3g083450 27.224 562 343 18 26 567 27 542 4.08e-48 176
MS.gene70575.t1 MTR_3g083400 27.224 562 343 18 26 567 26 541 8.09e-48 175
MS.gene70575.t1 MTR_4g101650 28.007 557 345 17 27 562 29 550 1.62e-47 175
MS.gene70575.t1 MTR_3g083430 27.046 562 344 18 26 567 26 541 1.84e-47 174
MS.gene70575.t1 MTR_8g479380 27.757 544 311 21 48 567 52 537 3.10e-47 173
MS.gene70575.t1 MTR_3g083410 27.407 540 326 18 48 567 12 505 8.01e-47 172
MS.gene70575.t1 MTR_4g049390 27.728 559 329 16 25 562 27 531 7.70e-46 169
MS.gene70575.t1 MTR_3g008580 27.223 551 337 16 37 562 41 552 7.73e-46 171
MS.gene70575.t1 MTR_4g083190 25.901 583 364 20 7 567 7 543 1.03e-45 169
MS.gene70575.t1 MTR_4g048350 26.799 556 337 15 25 562 27 530 7.69e-45 167
MS.gene70575.t1 MTR_1g090707 26.577 523 301 15 44 539 43 509 2.06e-44 166
MS.gene70575.t1 MTR_4g132320 27.163 578 339 19 14 565 17 538 6.17e-44 164
MS.gene70575.t1 MTR_4g083210 26.937 568 333 20 26 567 26 537 2.94e-43 162
MS.gene70575.t1 MTR_3g115050 25.835 569 353 17 16 565 19 537 4.30e-43 162
MS.gene70575.t1 MTR_4g075690 26.297 559 336 16 25 562 30 533 5.21e-43 162
MS.gene70575.t1 MTR_7g051440 27.622 572 349 23 26 573 30 560 5.86e-43 162
MS.gene70575.t1 MTR_2g088080 27.611 565 322 20 25 562 30 534 7.59e-43 161
MS.gene70575.t1 MTR_1g026410 26.241 564 340 20 25 566 29 538 8.19e-41 155
MS.gene70575.t1 MTR_4g075690 26.059 472 279 14 25 480 30 447 4.67e-33 132
MS.gene70575.t1 MTR_2g088080 27.006 511 287 19 79 562 2 453 5.34e-33 132
MS.gene70575.t1 MTR_2g009230 88.525 61 7 0 130 190 1 61 5.78e-33 121
MS.gene70575.t1 MTR_5g081790 32.197 264 153 9 278 524 166 420 9.01e-19 89.4
MS.gene70575.t1 MTR_5g081790 35.417 144 83 4 6 142 7 147 4.00e-18 87.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene70575.t1 AT5G21105 64.561 570 198 2 9 574 19 588 0.0 791
MS.gene70575.t1 AT5G21105 65.000 520 178 2 9 524 19 538 0.0 720
MS.gene70575.t1 AT5G21100 61.111 558 209 5 17 570 16 569 0.0 715
MS.gene70575.t1 AT4G39830 50.089 563 256 8 19 566 30 582 0.0 578
MS.gene70575.t1 AT5G21105 64.341 387 137 1 189 574 11 397 0.0 536
MS.gene70575.t1 AT4G39830 49.899 495 223 8 87 566 3 487 2.87e-170 492
MS.gene70575.t1 AT4G39830 49.798 494 223 8 88 566 2 485 2.69e-169 489
MS.gene70575.t1 AT4G39830 47.677 495 221 9 87 566 3 474 1.39e-156 457
MS.gene70575.t1 AT5G05390 30.225 579 333 19 1 544 1 543 1.33e-70 237
MS.gene70575.t1 AT5G03260 32.904 544 313 17 22 544 23 535 7.50e-70 235
MS.gene70575.t1 AT5G09360 31.930 570 325 20 2 544 14 547 8.55e-68 230
MS.gene70575.t1 AT5G58910 31.341 552 313 19 24 544 29 545 7.02e-67 228
MS.gene70575.t1 AT5G58910 31.341 552 312 20 24 544 29 544 2.35e-65 223
MS.gene70575.t1 AT2G29130 32.105 570 329 18 1 540 6 547 1.37e-64 221
MS.gene70575.t1 AT2G30210 31.250 544 297 19 40 544 43 548 3.36e-64 220
MS.gene70575.t1 AT5G48100 30.496 564 326 18 14 544 11 541 1.04e-63 219
MS.gene70575.t1 AT5G01050 30.228 569 327 20 11 544 13 546 1.24e-63 219
MS.gene70575.t1 AT3G09220 30.195 563 333 19 12 544 13 545 1.37e-63 219
MS.gene70575.t1 AT5G07130 31.041 567 333 18 10 544 7 547 3.75e-63 218
MS.gene70575.t1 AT2G40370 29.900 602 340 22 7 559 9 577 7.76e-63 217
MS.gene70575.t1 AT5G01040 29.474 570 328 18 11 544 13 544 4.18e-62 215
MS.gene70575.t1 AT1G18140 29.897 582 332 21 20 559 24 571 9.80e-61 211
MS.gene70575.t1 AT2G38080 30.728 563 333 20 8 544 5 536 9.79e-60 208
MS.gene70575.t1 AT5G60020 29.828 580 336 20 1 540 3 551 7.13e-59 206
MS.gene70575.t1 AT2G46570 28.700 554 329 20 22 544 29 547 3.96e-57 201
MS.gene70575.t1 AT5G01190 29.443 557 347 15 7 544 7 536 1.03e-56 200
MS.gene70575.t1 AT5G58910 30.224 536 301 20 40 544 8 501 1.51e-56 199
MS.gene70575.t1 AT5G60020 30.314 541 308 19 40 540 8 519 1.01e-55 197
MS.gene70575.t1 AT5G01190 30.636 519 314 15 45 544 31 522 4.67e-54 192
MS.gene70575.t1 AT5G60020 29.255 564 328 20 1 524 3 535 1.08e-51 186
MS.gene70575.t1 AT1G55570 28.826 562 325 21 26 562 30 541 3.47e-50 182
MS.gene70575.t1 AT1G75790 27.634 579 343 20 12 562 12 542 5.63e-50 181
MS.gene70575.t1 AT4G12420 26.441 590 374 18 1 567 1 553 8.75e-50 181
MS.gene70575.t1 AT4G12420 26.441 590 374 18 1 567 1 553 8.75e-50 181
MS.gene70575.t1 AT4G22010 28.277 534 310 17 25 540 26 504 2.73e-48 176
MS.gene70575.t1 AT5G66920 26.975 519 317 14 25 532 37 504 1.39e-47 174
MS.gene70575.t1 AT1G21860 27.130 575 338 19 16 565 16 534 3.46e-46 171
MS.gene70575.t1 AT1G21850 27.022 581 350 19 4 562 3 531 5.07e-46 170
MS.gene70575.t1 AT3G13390 28.470 562 327 22 26 562 29 540 1.48e-45 169
MS.gene70575.t1 AT5G07130 30.165 484 283 16 91 544 4 462 2.16e-45 167
MS.gene70575.t1 AT5G07130 30.165 484 283 16 91 544 4 462 2.16e-45 167
MS.gene70575.t1 AT5G51480 27.482 564 349 22 27 567 30 556 1.36e-44 167
MS.gene70575.t1 AT4G25240 26.871 588 371 19 2 567 6 556 2.02e-44 166
MS.gene70575.t1 AT4G25240 26.871 588 371 19 2 567 6 556 2.02e-44 166
MS.gene70575.t1 AT4G37160 25.269 558 348 17 27 566 33 539 2.33e-44 166
MS.gene70575.t1 AT2G46570 27.992 493 290 19 83 544 4 462 2.28e-43 162
MS.gene70575.t1 AT3G09220 28.992 476 279 18 99 544 2 448 7.35e-43 160
MS.gene70575.t1 AT4G28090 27.863 585 339 21 9 565 9 538 8.00e-43 161
MS.gene70575.t1 AT2G23630 27.158 556 331 20 27 562 32 533 8.77e-43 161
MS.gene70575.t1 AT2G23630 27.158 556 331 20 27 562 37 538 9.32e-43 161
MS.gene70575.t1 AT5G48450 25.880 568 360 16 20 567 22 548 1.49e-42 161
MS.gene70575.t1 AT5G48450 25.880 568 360 16 20 567 22 548 1.77e-42 161
MS.gene70575.t1 AT1G76160 25.089 562 345 17 25 565 28 534 1.59e-40 155
MS.gene70575.t1 AT1G41830 24.197 529 334 13 25 539 29 504 2.71e-37 145
MS.gene70575.t1 AT3G13400 25.719 556 349 17 26 562 28 538 1.21e-35 141
MS.gene70575.t1 AT3G13400 25.719 556 349 17 26 562 28 538 1.21e-35 141
MS.gene70575.t1 AT4G38420 24.382 566 351 20 25 565 30 543 3.89e-34 136
MS.gene70575.t1 AT1G55560 24.865 555 349 20 29 562 30 537 2.02e-33 134
MS.gene70575.t1 AT4G37160 25.268 467 286 14 27 480 33 449 2.74e-33 132
MS.gene70575.t1 AT4G38420 24.206 504 310 18 25 508 30 481 1.83e-26 113
MS.gene70575.t1 AT4G38420 24.370 476 289 17 25 480 30 454 1.98e-25 109

Find 144 sgRNAs with CRISPR-Local

Find 396 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTGAGGGTGTTCATAAAAT+TGG 0.125745 3.1:+64565511 MS.gene70575:CDS
AAATCGGTAATTTCACTAAA+TGG 0.163317 3.1:+64565008 MS.gene70575:CDS
TTGGACTGCATTAAGGTTTA+AGG 0.221108 3.1:+64565414 MS.gene70575:CDS
CTCAGTTGTGGGTGTTGTTT+AGG 0.244247 3.1:-64565582 None:intergenic
TGTCTGTGGTGTTCCCATTC+TGG 0.244260 3.1:-64564939 None:intergenic
TATTATAGTTAAGGATTGTT+AGG 0.255819 3.1:-64564820 None:intergenic
TTTGTTTGGTATATATGGTT+AGG 0.274547 3.1:+64559908 MS.gene70575:CDS
CTTATGGTTGGACTGCATTA+AGG 0.292432 3.1:+64565407 MS.gene70575:CDS
GCTCCTAAGTAAGGTGTTAT+TGG 0.293518 3.1:-64565058 None:intergenic
GTGATTGGTGGTGGTAATAT+AGG 0.293720 3.1:-64564863 None:intergenic
ACTGCAGTTATATTTCCTTA+TGG 0.308341 3.1:+64565391 MS.gene70575:CDS
TGGCGCTACTTCGAGAATCT+TGG 0.314451 3.1:-64563970 None:intergenic
AGGCAGACAACCCTGGTGTT+TGG 0.318817 3.1:+64565434 MS.gene70575:CDS
CGATTGAGAGCCAGTAGTTT+TGG 0.320504 3.1:-64564763 None:intergenic
GTTGTTGTACTTGGATTAAC+TGG 0.324579 3.1:-64565163 None:intergenic
GGCAGACAACCCTGGTGTTT+GGG 0.333727 3.1:+64565435 MS.gene70575:CDS
CCGTTACCCGTTGTTGTACT+TGG 0.339838 3.1:-64565172 None:intergenic
CAGGGTTTGTATTATAGTTA+AGG 0.342158 3.1:-64564829 None:intergenic
GTTCACCAACCCATCTCATT+GGG 0.342539 3.1:-64561484 None:intergenic
CTGAGGGTGTTCATAAAATT+GGG 0.343862 3.1:+64565512 MS.gene70575:CDS
AATGGCTCGCTTTGGTTGTT+TGG 0.353112 3.1:-64561377 None:intergenic
CACCACCAATCACTCCCTTA+TGG 0.366354 3.1:+64564873 MS.gene70575:CDS
CATTGAACCACATTTGCATC+TGG 0.368806 3.1:+64565471 MS.gene70575:CDS
GGAATCAATGGTCAGTTTCC+TGG 0.370438 3.1:+64560025 MS.gene70575:CDS
TTAAATATGTCGAAATCAAA+TGG 0.374923 3.1:-64565136 None:intergenic
TGATTGGTGGTGGTAATATA+GGG 0.386257 3.1:-64564862 None:intergenic
TTGTTTGGTATATATGGTTA+GGG 0.388048 3.1:+64559909 MS.gene70575:CDS
TCCTTCTGTAGAGAGCTTGT+TGG 0.390891 3.1:-64560095 None:intergenic
GGCGCTACTTCGAGAATCTT+GGG 0.392401 3.1:-64563969 None:intergenic
AGGTGTTATTGGCAATGTTA+AGG 0.403860 3.1:-64565047 None:intergenic
TATTTGATTGCTCCTAAGTA+AGG 0.405813 3.1:-64565067 None:intergenic
TATTTCTATCATGGACACTA+TGG 0.409360 3.1:+64561308 MS.gene70575:CDS
CTTTGAAATTGCATTGAGGC+AGG 0.417474 3.1:-64563929 None:intergenic
CTCAACACACAAAACAAAAT+CGG 0.420483 3.1:+64564992 MS.gene70575:CDS
AATCGGTAATTTCACTAAAT+GGG 0.420700 3.1:+64565009 MS.gene70575:CDS
TTTGTAGATTGGAACTCCTT+GGG 0.426712 3.1:+64561001 MS.gene70575:intron
CTCTTCAGCCCCAATGAGAT+GGG 0.429001 3.1:+64561475 MS.gene70575:CDS
AAATCAAATGGGAATCTATC+TGG 0.430172 3.1:-64565124 None:intergenic
CTGTAATGAAAAGTTTCTCC+TGG 0.432582 3.1:-64561062 None:intergenic
CATAATGAAATGGCTCGCTT+TGG 0.432881 3.1:-64561385 None:intergenic
AACTCACCATCATAATGAAA+TGG 0.432896 3.1:-64561395 None:intergenic
GGTTCACCAACCCATCTCAT+TGG 0.433465 3.1:-64561485 None:intergenic
ATTTGACACGTGCACCTTTG+AGG 0.440703 3.1:+64565365 MS.gene70575:CDS
AGCGAGCCATTTCATTATGA+TGG 0.443509 3.1:+64561389 MS.gene70575:CDS
CAGAGAGCAGCAGGGTTGTA+TGG 0.444015 3.1:+64561335 MS.gene70575:CDS
GATCTTGGTCCGTGTGTAGA+AGG 0.444511 3.1:-64564736 None:intergenic
CCAACTTCAGCTCTAATAGT+TGG 0.449801 3.1:-64560049 None:intergenic
ATTACAGATTCATTGTTGAC+AGG 0.449902 3.1:+64561078 MS.gene70575:CDS
CAGTTATATTTCCTTATGGT+TGG 0.450961 3.1:+64565395 MS.gene70575:CDS
TCTCTTCAGCCCCAATGAGA+TGG 0.452079 3.1:+64561474 MS.gene70575:CDS
AAACAAATCATTTCCAGAAT+GGG 0.453424 3.1:+64564926 MS.gene70575:CDS
ATTATAGTTAAGGATTGTTA+GGG 0.461154 3.1:-64564819 None:intergenic
ATTGGAACTCCTTGGGCTGA+TGG 0.463869 3.1:+64561008 MS.gene70575:CDS
GGTGTTGTTTAGGAACATCT+TGG 0.466856 3.1:-64565572 None:intergenic
TTAAGGATTGTTAGGGCTTG+TGG 0.473400 3.1:-64564812 None:intergenic
CCTGGTACATATTTCTATCA+TGG 0.478578 3.1:+64561299 MS.gene70575:CDS
AAAACAAATCATTTCCAGAA+TGG 0.478795 3.1:+64564925 MS.gene70575:CDS
CAAAACTACTGGCTCTCAAT+CGG 0.478813 3.1:+64564764 MS.gene70575:CDS
GTTAATCCAAGTACAACAAC+GGG 0.479161 3.1:+64565166 MS.gene70575:CDS
TATGGCATGCAGAGAGCAGC+AGG 0.482439 3.1:+64561326 MS.gene70575:CDS
CTTAATGCAGTCCAACCATA+AGG 0.485250 3.1:-64565406 None:intergenic
ACCACATTTGCATCTGGGAA+TGG 0.487721 3.1:+64565477 MS.gene70575:CDS
TAAATATGTCGAAATCAAAT+GGG 0.488708 3.1:-64565135 None:intergenic
TCTATGCTATCAACCGTGAA+TGG 0.489752 3.1:-64564686 None:intergenic
CGCTCGAAATCGTTCCATAA+GGG 0.490554 3.1:-64564887 None:intergenic
ACAACATGCTCTATGCAATC+TGG 0.490800 3.1:-64559998 None:intergenic
CAACTTCAGCTCTAATAGTT+GGG 0.494195 3.1:-64560048 None:intergenic
AATATAGGGAAAGTTGAGGC+AGG 0.496705 3.1:-64564848 None:intergenic
GCGCTCGAAATCGTTCCATA+AGG 0.499345 3.1:-64564888 None:intergenic
AGCTTAGCTAGTCTCAGTTG+TGG 0.500207 3.1:-64565594 None:intergenic
TCGTTCCATAAGGGAGTGAT+TGG 0.500888 3.1:-64564878 None:intergenic
AAACTACGTGCACCCATTCA+CGG 0.502338 3.1:+64564673 MS.gene70575:CDS
CAATGAAATGCCCAAACACC+AGG 0.503898 3.1:-64565445 None:intergenic
GTCCTTAGCTTCTCTCAACT+TGG 0.508173 3.1:+64564028 MS.gene70575:CDS
TTGCCAATAACACCTTACTT+AGG 0.510406 3.1:+64565055 MS.gene70575:CDS
GCTTAGCTAGTCTCAGTTGT+GGG 0.510640 3.1:-64565593 None:intergenic
ACTTGCAATCCTAATTCTGT+AGG 0.513702 3.1:-64564000 None:intergenic
CTGTAGAGAGCTTGTTGGTG+AGG 0.522573 3.1:-64560090 None:intergenic
TGTTCACGAAATTAGCTGCT+AGG 0.529978 3.1:-64563902 None:intergenic
CAGAAGGAACTGTTATTCAC+TGG 0.532868 3.1:+64560110 MS.gene70575:CDS
AAGATCCCAACCAAAACTAC+TGG 0.534040 3.1:+64564753 MS.gene70575:CDS
CCACATTTGCATCTGGGAAT+GGG 0.538253 3.1:+64565478 MS.gene70575:CDS
ATTGAACCACATTTGCATCT+GGG 0.538898 3.1:+64565472 MS.gene70575:CDS
CCCATTCCCAGATGCAAATG+TGG 0.540042 3.1:-64565478 None:intergenic
TTCCATAAGGGAGTGATTGG+TGG 0.540746 3.1:-64564875 None:intergenic
AGCTTGCTCATCAATGGAAG+AGG 0.544734 3.1:+64563864 MS.gene70575:CDS
GGCCAAGTTGAGAGAAGCTA+AGG 0.545213 3.1:-64564030 None:intergenic
TCTCAGTGTGCTATAAATCC+AGG 0.546219 3.1:+64561044 MS.gene70575:CDS
GTTCATCCATGGCATTTGCA+TGG 0.550858 3.1:+64565274 MS.gene70575:CDS
AGGTTTAAGGCAGACAACCC+TGG 0.556431 3.1:+64565427 MS.gene70575:CDS
GGAACTGTTATTCACTGGCA+TGG 0.556886 3.1:+64560115 MS.gene70575:CDS
TCAGCTCTAATAGTTGGGCC+AGG 0.557489 3.1:-64560043 None:intergenic
GTTCACGAAATTAGCTGCTA+GGG 0.560510 3.1:-64563901 None:intergenic
TTACAGATTCATTGTTGACA+GGG 0.563984 3.1:+64561079 MS.gene70575:CDS
TCAGCCCCAATGAGATGGGT+TGG 0.567659 3.1:+64561479 MS.gene70575:CDS
AATGGGAATCTATCTGGTGG+TGG 0.568086 3.1:-64565118 None:intergenic
CCATGATAGAAATATGTACC+AGG 0.570980 3.1:-64561299 None:intergenic
CTATGCTATCAACCGTGAAT+GGG 0.572088 3.1:-64564685 None:intergenic
CCAACTATTAGAGCTGAAGT+TGG 0.572309 3.1:+64560049 MS.gene70575:CDS
CTGCCTCAATGCAATTTCAA+AGG 0.573833 3.1:+64563930 MS.gene70575:CDS
CATAAGGGAGTGATTGGTGG+TGG 0.576952 3.1:-64564872 None:intergenic
CTTGTTGTGGTGGAAGCAGA+TGG 0.578406 3.1:+64564650 MS.gene70575:CDS
CATGTTGTGATGGGAATCAA+TGG 0.578474 3.1:+64560013 MS.gene70575:CDS
TTACACGTTTCACTTAAATG+AGG 0.579316 3.1:+64565198 MS.gene70575:CDS
TTGCATAGAGCATGTTGTGA+TGG 0.579841 3.1:+64560003 MS.gene70575:CDS
GAAACATTACAAGTTTGATG+TGG 0.579860 3.1:+64559958 MS.gene70575:CDS
CATCTGCTTCCACCACAACA+AGG 0.580093 3.1:-64564649 None:intergenic
ATCTCATTGGGGCTGAAGAG+AGG 0.581211 3.1:-64561472 None:intergenic
CCAAGTACAACAACGGGTAA+CGG 0.582426 3.1:+64565172 MS.gene70575:CDS
ATCTGCTCCTCAGTGATCTG+TGG 0.584818 3.1:+64561420 MS.gene70575:CDS
GAGATGGGTTGGTGAACCAC+AGG 0.584866 3.1:+64561490 MS.gene70575:CDS
ATATAGGGAAAGTTGAGGCA+GGG 0.586056 3.1:-64564847 None:intergenic
ATAACTGCAGTGTTCCTCAA+AGG 0.587942 3.1:-64565379 None:intergenic
TCACTGGCATGGAATCAGAC+AGG 0.589797 3.1:+64560126 MS.gene70575:CDS
CACAAGTTCACAAGAACAAG+AGG 0.595059 3.1:+64561445 MS.gene70575:CDS
TGCATAGAGCATGTTGTGAT+GGG 0.595383 3.1:+64560004 MS.gene70575:CDS
CCACCTTTGAAATTGCATTG+AGG 0.597277 3.1:-64563933 None:intergenic
ACCAACAAGCTCTCTACAGA+AGG 0.601317 3.1:+64560094 MS.gene70575:CDS
TTTGAAATTGCATTGAGGCA+GGG 0.606053 3.1:-64563928 None:intergenic
CCTCAATGCAATTTCAAAGG+TGG 0.612230 3.1:+64563933 MS.gene70575:CDS
TCATGTCCATGCAAATGCCA+TGG 0.613062 3.1:-64565280 None:intergenic
CCTACACATGCTCTTACTTG+TGG 0.613192 3.1:+64565541 MS.gene70575:CDS
GAATCACACCCTTGTTGTGG+TGG 0.615258 3.1:+64564640 MS.gene70575:intron
TTCACCAACCCATCTCATTG+GGG 0.616416 3.1:-64561483 None:intergenic
AGTTCACAAGAACAAGAGGT+TGG 0.621180 3.1:+64561449 MS.gene70575:CDS
ATACTAGTGAAGTTCATCCA+TGG 0.627356 3.1:+64565263 MS.gene70575:CDS
CTACTCAGTCCTTCTACACA+CGG 0.628943 3.1:+64564727 MS.gene70575:CDS
AGTTAATCCAAGTACAACAA+CGG 0.640190 3.1:+64565165 MS.gene70575:CDS
GATAGCATAGACATCTACTC+AGG 0.642343 3.1:+64564698 MS.gene70575:CDS
GCTTGCTCATCAATGGAAGA+GGG 0.643075 3.1:+64563865 MS.gene70575:CDS
GCAGCAGTTCCATCAGCCCA+AGG 0.643166 3.1:-64561017 None:intergenic
ATCTGCTTCCACCACAACAA+GGG 0.647563 3.1:-64564648 None:intergenic
GTAGAATCACACCCTTGTTG+TGG 0.648768 3.1:+64564637 MS.gene70575:intron
CGTGTGTAGAAGGACTGAGT+AGG 0.651575 3.1:-64564726 None:intergenic
TCAAATGGGAATCTATCTGG+TGG 0.659562 3.1:-64565121 None:intergenic
TGGTAATATAGGGAAAGTTG+AGG 0.684103 3.1:-64564852 None:intergenic
CCACAAGTAAGAGCATGTGT+AGG 0.697143 3.1:-64565541 None:intergenic
AATGAAATGCCCAAACACCA+GGG 0.701200 3.1:-64565444 None:intergenic
GAAATTGCATTGAGGCAGGG+TGG 0.703546 3.1:-64563925 None:intergenic
ATGGCATGCAGAGAGCAGCA+GGG 0.712589 3.1:+64561327 MS.gene70575:CDS
GTTGGTGAGGTCAATGACAA+CGG 0.719426 3.1:-64560077 None:intergenic
TGTTGAGGAGGTAAATTGTG+CGG 0.723525 3.1:-64564976 None:intergenic
GGTGAAGGGAAATTTCAACC+AGG 0.727102 3.1:+64565322 MS.gene70575:CDS
TTGTGTGCCACAGATCACTG+AGG 0.796939 3.1:-64561427 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAACAACAAAAAATGTATA+AGG - chr3.1:64560931-64560950 None:intergenic 15.0%
!! AGTATTATAACAATCTAAAT+TGG - chr3.1:64563043-64563062 None:intergenic 15.0%
!! ATTGTGTATAAAAAAATGTT+TGG + chr3.1:64564269-64564288 MS.gene70575:intron 15.0%
!! CATTACAAAATAATCTTAAA+CGG - chr3.1:64564337-64564356 None:intergenic 15.0%
!! TACTATATATTGAGTATATA+TGG + chr3.1:64562316-64562335 MS.gene70575:intron 15.0%
!! TTTATATTATTAATCTGAAC+TGG + chr3.1:64563558-64563577 MS.gene70575:intron 15.0%
!! TTTCCTTTATTAAAAGTTAA+AGG - chr3.1:64563612-64563631 None:intergenic 15.0%
!!! AATAATAATGTTTTGTAGAT+TGG + chr3.1:64560990-64561009 MS.gene70575:intron 15.0%
!!! ACCAAAAACATTATTTTATA+GGG - chr3.1:64562240-64562259 None:intergenic 15.0%
!!! GTTTAAGATTATTTTGTAAT+GGG + chr3.1:64564336-64564355 MS.gene70575:intron 15.0%
!!! TACATTTTTTGTTGTTTTTT+TGG + chr3.1:64560933-64560952 MS.gene70575:intron 15.0%
!!! TACCAAAAACATTATTTTAT+AGG - chr3.1:64562241-64562260 None:intergenic 15.0%
!!! TATCCTTTAACTTTTAATAA+AGG + chr3.1:64563606-64563625 MS.gene70575:intron 15.0%
!!! TCATTGTTAATAAGTTATTT+TGG + chr3.1:64562845-64562864 MS.gene70575:intron 15.0%
!!! TTTAAGATTATTTTGTAATG+GGG + chr3.1:64564337-64564356 MS.gene70575:intron 15.0%
!! AAAAAAGTCATCATAATGTA+TGG - chr3.1:64563842-64563861 None:intergenic 20.0%
!! AAAAGTTAAAGGATAAACTA+AGG - chr3.1:64563601-64563620 None:intergenic 20.0%
!! AATGCAAATATATATCTAGT+AGG - chr3.1:64564091-64564110 None:intergenic 20.0%
!! ACAATGCATTATTATATGTA+GGG + chr3.1:64563150-64563169 MS.gene70575:intron 20.0%
!! AGGAAATAAAAATGATATCT+AGG + chr3.1:64560455-64560474 MS.gene70575:intron 20.0%
!! AGTATTATAACAAGATAGAT+TGG - chr3.1:64561950-64561969 None:intergenic 20.0%
!! ATATATATGATATTAACGTG+TGG + chr3.1:64561255-64561274 MS.gene70575:intron 20.0%
!! ATCATTCATTCATCAATTAA+CGG + chr3.1:64564592-64564611 MS.gene70575:intron 20.0%
!! ATTATAGTTAAGGATTGTTA+GGG - chr3.1:64564822-64564841 None:intergenic 20.0%
!! CCAAATAAAGTATATATTTG+AGG - chr3.1:64564400-64564419 None:intergenic 20.0%
!! CCATAAGATTAATTTAATCA+TGG + chr3.1:64563738-64563757 MS.gene70575:intron 20.0%
!! CCATGATTAAATTAATCTTA+TGG - chr3.1:64563741-64563760 None:intergenic 20.0%
!! CCTCAAATATATACTTTATT+TGG + chr3.1:64564397-64564416 MS.gene70575:intron 20.0%
!! GAAAAAGAAAATATTACAAG+TGG - chr3.1:64563451-64563470 None:intergenic 20.0%
!! GATTAATTTAATCATGGATA+TGG + chr3.1:64563744-64563763 MS.gene70575:intron 20.0%
!! GGAAATAAAAATGATATCTA+GGG + chr3.1:64560456-64560475 MS.gene70575:intron 20.0%
!! GTAAATATTCATAAAGATGA+GGG + chr3.1:64560432-64560451 MS.gene70575:intron 20.0%
!! TAAATATGTCGAAATCAAAT+GGG - chr3.1:64565138-64565157 None:intergenic 20.0%
!! TAACTTATTAACAATGAGTA+TGG - chr3.1:64562842-64562861 None:intergenic 20.0%
!! TATATATGATATTAACGTGT+GGG + chr3.1:64561256-64561275 MS.gene70575:intron 20.0%
!! TATTATAGTTAAGGATTGTT+AGG - chr3.1:64564823-64564842 None:intergenic 20.0%
!! TGTAAATATTCATAAAGATG+AGG + chr3.1:64560431-64560450 MS.gene70575:intron 20.0%
!! TTAAATATGTCGAAATCAAA+TGG - chr3.1:64565139-64565158 None:intergenic 20.0%
!!! ATGTTTTTGGTACTTTTATT+AGG + chr3.1:64562249-64562268 MS.gene70575:intron 20.0%
!!! CGTTTAAGATTATTTTGTAA+TGG + chr3.1:64564335-64564354 MS.gene70575:intron 20.0%
!!! CTTTGAACTTTTTTAGAAAT+TGG - chr3.1:64560862-64560881 None:intergenic 20.0%
!!! GACTTTTTGTAGTTTTAATT+TGG - chr3.1:64561781-64561800 None:intergenic 20.0%
!!! GTTTGTAAAAAGTTTTCTTA+TGG + chr3.1:64560757-64560776 MS.gene70575:intron 20.0%
!!! TCCCTATAAAATAATGTTTT+TGG + chr3.1:64562236-64562255 MS.gene70575:intron 20.0%
!!! TGTTTTTGGTACTTTTATTA+GGG + chr3.1:64562250-64562269 MS.gene70575:intron 20.0%
!!! TTAATCGCATACTTTTTTTT+TGG - chr3.1:64563268-64563287 None:intergenic 20.0%
!!! TTTTTTGTTGTTTTTTTGGT+AGG + chr3.1:64560937-64560956 MS.gene70575:intron 20.0%
! AAAACAAATCATTTCCAGAA+TGG + chr3.1:64564925-64564944 MS.gene70575:CDS 25.0%
! AAACAAATCATTTCCAGAAT+GGG + chr3.1:64564926-64564945 MS.gene70575:CDS 25.0%
! AAAGAAAATATTACAAGTGG+AGG - chr3.1:64563448-64563467 None:intergenic 25.0%
! AAATCGGTAATTTCACTAAA+TGG + chr3.1:64565008-64565027 MS.gene70575:CDS 25.0%
! AAATTACAAAACGTTTAGAG+AGG - chr3.1:64562198-64562217 None:intergenic 25.0%
! AATCGGTAATTTCACTAAAT+GGG + chr3.1:64565009-64565028 MS.gene70575:CDS 25.0%
! AGATCAAAAACTTACTGAAA+TGG - chr3.1:64564054-64564073 None:intergenic 25.0%
! CAAAAAAAACCTACAGAATT+AGG + chr3.1:64563991-64564010 MS.gene70575:CDS 25.0%
! CAATGCATTATTATATGTAG+GGG + chr3.1:64563151-64563170 MS.gene70575:intron 25.0%
! CAATTAACATTGTACCAAAA+AGG + chr3.1:64563101-64563120 MS.gene70575:intron 25.0%
! GACAATGCATTATTATATGT+AGG + chr3.1:64563149-64563168 MS.gene70575:intron 25.0%
! GGAAAAAAATGTCATTCATA+AGG - chr3.1:64563812-64563831 None:intergenic 25.0%
! TCTACATGACACAAAAATTA+TGG - chr3.1:64564622-64564641 None:intergenic 25.0%
! TTCATCGATAAAATCAGTTT+AGG - chr3.1:64564544-64564563 None:intergenic 25.0%
! TTGTTTGGTATATATGGTTA+GGG + chr3.1:64559909-64559928 MS.gene70575:CDS 25.0%
! TTTAGAAATTGGTCATAGAT+TGG - chr3.1:64560851-64560870 None:intergenic 25.0%
! TTTGTTTGGTATATATGGTT+AGG + chr3.1:64559908-64559927 MS.gene70575:CDS 25.0%
!! GAAAAAAGACAATGTTGTTT+AGG - chr3.1:64563772-64563791 None:intergenic 25.0%
!! GATTTAAAGCAAAGCATTAT+TGG - chr3.1:64563021-64563040 None:intergenic 25.0%
!!! AATGAGATAGTGATTTTTAG+AGG - chr3.1:64563365-64563384 None:intergenic 25.0%
!!! AATGTGTTATTTTTTTGGTC+AGG - chr3.1:64563242-64563261 None:intergenic 25.0%
!!! ACTCACTTTAAGATTCAATT+TGG - chr3.1:64563401-64563420 None:intergenic 25.0%
!!! AGTTTTAATTTGGATCGATT+TGG - chr3.1:64561771-64561790 None:intergenic 25.0%
!!! ATAAGTTATTTTGGTCCATA+TGG + chr3.1:64562854-64562873 MS.gene70575:intron 25.0%
!!! ATGTTTTAGATGGTATCAAT+TGG + chr3.1:64562445-64562464 MS.gene70575:intron 25.0%
!!! CATTTTTTTATACACAATCG+AGG - chr3.1:64564267-64564286 None:intergenic 25.0%
!!! CTAATTCTGTAGGTTTTTTT+TGG - chr3.1:64563993-64564012 None:intergenic 25.0%
!!! CTGTTTTTGTTTGGTATATA+TGG + chr3.1:64559903-64559922 MS.gene70575:CDS 25.0%
!!! GGTACAATGTGTTATTTTTT+TGG - chr3.1:64563247-64563266 None:intergenic 25.0%
!!! TGTTAAAAGCTGTTTTTGTT+TGG + chr3.1:64559894-64559913 MS.gene70575:CDS 25.0%
AAAACTCCCAAACAAAGATT+GGG - chr3.1:64561842-64561861 None:intergenic 30.0%
AAAGAATGGAGAACTTTAGA+GGG + chr3.1:64561899-64561918 MS.gene70575:intron 30.0%
AAAGTCATCATAATGTATGG+TGG - chr3.1:64563839-64563858 None:intergenic 30.0%
AAATCAAATGGGAATCTATC+TGG - chr3.1:64565127-64565146 None:intergenic 30.0%
AACAAAAGAAAAACCATTGC+TGG - chr3.1:64561182-64561201 None:intergenic 30.0%
AACATATCACTAAGGAAACT+AGG - chr3.1:64562430-64562449 None:intergenic 30.0%
AACTCACCATCATAATGAAA+TGG - chr3.1:64561398-64561417 None:intergenic 30.0%
AAGTCATCATAATGTATGGT+GGG - chr3.1:64563838-64563857 None:intergenic 30.0%
AATATTCATAAAGATGAGGG+AGG + chr3.1:64560435-64560454 MS.gene70575:intron 30.0%
ACATATCACTAAGGAAACTA+GGG - chr3.1:64562429-64562448 None:intergenic 30.0%
ACTGCAGTTATATTTCCTTA+TGG + chr3.1:64565391-64565410 MS.gene70575:CDS 30.0%
AGTTAATCCAAGTACAACAA+CGG + chr3.1:64565165-64565184 MS.gene70575:CDS 30.0%
ATATATGGTCTCAATAGACA+GGG + chr3.1:64562331-64562350 MS.gene70575:intron 30.0%
ATCTCATCTGGATTATTCAA+AGG + chr3.1:64562889-64562908 MS.gene70575:intron 30.0%
ATGATCAATAAAAACGTGCA+AGG - chr3.1:64562125-64562144 None:intergenic 30.0%
ATTAACAATGAGTATGGAGT+GGG - chr3.1:64562836-64562855 None:intergenic 30.0%
ATTACAGATTCATTGTTGAC+AGG + chr3.1:64561078-64561097 MS.gene70575:CDS 30.0%
ATTCAATTTGGAAGCTTAGA+GGG - chr3.1:64563389-64563408 None:intergenic 30.0%
CAGGGTTTGTATTATAGTTA+AGG - chr3.1:64564832-64564851 None:intergenic 30.0%
CAGTTATATTTCCTTATGGT+TGG + chr3.1:64565395-64565414 MS.gene70575:CDS 30.0%
CTCAACACACAAAACAAAAT+CGG + chr3.1:64564992-64565011 MS.gene70575:CDS 30.0%
GAAACATTACAAGTTTGATG+TGG + chr3.1:64559958-64559977 MS.gene70575:CDS 30.0%
GAAGCAAGAATCATAAAGAA+TGG + chr3.1:64561885-64561904 MS.gene70575:intron 30.0%
GAGTAATATGGATATGTAGA+AGG - chr3.1:64562511-64562530 None:intergenic 30.0%
GTAGAAGGAAAATCAGTTAT+GGG - chr3.1:64562496-64562515 None:intergenic 30.0%
GTGCTAAGGTTGAATAATAT+GGG - chr3.1:64562634-64562653 None:intergenic 30.0%
TAAAGAATGGAGAACTTTAG+AGG + chr3.1:64561898-64561917 MS.gene70575:intron 30.0%
TATATATGGTCTCAATAGAC+AGG + chr3.1:64562330-64562349 MS.gene70575:intron 30.0%
TATTAACAATGAGTATGGAG+TGG - chr3.1:64562837-64562856 None:intergenic 30.0%
TATTTGATTGCTCCTAAGTA+AGG - chr3.1:64565070-64565089 None:intergenic 30.0%
TCTTTCAACCTATACAATCA+TGG + chr3.1:64562787-64562806 MS.gene70575:intron 30.0%
TGAAAGAAGTTGAATAGGAA+GGG - chr3.1:64562774-64562793 None:intergenic 30.0%
TGGCTAGAATTTACCTTATA+AGG - chr3.1:64563211-64563230 None:intergenic 30.0%
TGTAGAAGGAAAATCAGTTA+TGG - chr3.1:64562497-64562516 None:intergenic 30.0%
TTACACGTTTCACTTAAATG+AGG + chr3.1:64565198-64565217 MS.gene70575:CDS 30.0%
TTACAGATTCATTGTTGACA+GGG + chr3.1:64561079-64561098 MS.gene70575:CDS 30.0%
TTGAAAGAAGTTGAATAGGA+AGG - chr3.1:64562775-64562794 None:intergenic 30.0%
TTGCTCATAATAGTAACAGA+CGG + chr3.1:64560242-64560261 MS.gene70575:intron 30.0%
TTGGGTTTCCATAAATGTAT+TGG - chr3.1:64562712-64562731 None:intergenic 30.0%
! AAAAGTTGAAAGTATACCTG+TGG - chr3.1:64561509-64561528 None:intergenic 30.0%
! AAGATGGACCAATTTTTGTT+TGG + chr3.1:64560598-64560617 MS.gene70575:intron 30.0%
! AAGGTAATTATGAAGGGTAT+GGG - chr3.1:64562682-64562701 None:intergenic 30.0%
! ATCACTTATTTGAGATCAAG+TGG + chr3.1:64561141-64561160 MS.gene70575:intron 30.0%
! ATTTGCATGGACATGATTTT+TGG + chr3.1:64565287-64565306 MS.gene70575:CDS 30.0%
! CCATCTAAAACATATCACTA+AGG - chr3.1:64562438-64562457 None:intergenic 30.0%
! GATTGTTGTTGAAAACCATA+TGG - chr3.1:64562872-64562891 None:intergenic 30.0%
! GTTTCCATAAATGTATTGGT+TGG - chr3.1:64562708-64562727 None:intergenic 30.0%
! TAGGTTGAAAGAAGTTGAAT+AGG - chr3.1:64562779-64562798 None:intergenic 30.0%
! TATTTCTATCATGGACACTA+TGG + chr3.1:64561308-64561327 MS.gene70575:CDS 30.0%
! TCATTGTATTTGATGGTTGA+CGG + chr3.1:64560302-64560321 MS.gene70575:intron 30.0%
! TTTGCATGGACATGATTTTT+GGG + chr3.1:64565288-64565307 MS.gene70575:CDS 30.0%
! TTTTCAACAACAATCTCATC+TGG + chr3.1:64562877-64562896 MS.gene70575:intron 30.0%
! TTTTTATCACTTTGTGTGCA+TGG - chr3.1:64560642-64560661 None:intergenic 30.0%
!! AAGATTATTTTGTAATGGGG+AGG + chr3.1:64564340-64564359 MS.gene70575:intron 30.0%
!! AGATGGACCAATTTTTGTTT+GGG + chr3.1:64560599-64560618 MS.gene70575:intron 30.0%
!! CCTTAGTGATATGTTTTAGA+TGG + chr3.1:64562435-64562454 MS.gene70575:intron 30.0%
AAGGAAAATCAGTTATGGGA+GGG - chr3.1:64562492-64562511 None:intergenic 35.0%
ACTTGCAATCCTAATTCTGT+AGG - chr3.1:64564003-64564022 None:intergenic 35.0%
AGGGTAGAGCTTGTAAAAAA+AGG + chr3.1:64561863-64561882 MS.gene70575:intron 35.0%
ATAAAGCGGATATAGGTATG+AGG - chr3.1:64562946-64562965 None:intergenic 35.0%
ATACTAGTGAAGTTCATCCA+TGG + chr3.1:64565263-64565282 MS.gene70575:CDS 35.0%
ATCTCTCTTTCTTGTGTAGT+AGG + chr3.1:64564119-64564138 MS.gene70575:intron 35.0%
ATGGTTAAGTGAGTAGAGAT+TGG + chr3.1:64560776-64560795 MS.gene70575:intron 35.0%
ATTGAACCACATTTGCATCT+GGG + chr3.1:64565472-64565491 MS.gene70575:CDS 35.0%
ATTGTGAGGATCGAGTAATA+TGG - chr3.1:64562523-64562542 None:intergenic 35.0%
CAAAACTCCCAAACAAAGAT+TGG - chr3.1:64561843-64561862 None:intergenic 35.0%
CCATGATAGAAATATGTACC+AGG - chr3.1:64561302-64561321 None:intergenic 35.0%
CCTTATAAGGTGAATAAGTG+CGG - chr3.1:64563198-64563217 None:intergenic 35.0%
CTGTAATGAAAAGTTTCTCC+TGG - chr3.1:64561065-64561084 None:intergenic 35.0%
GAAAATATTACAAGTGGAGG+TGG - chr3.1:64563445-64563464 None:intergenic 35.0%
GAAGGTAATTATGAAGGGTA+TGG - chr3.1:64562683-64562702 None:intergenic 35.0%
GATTCAATTTGGAAGCTTAG+AGG - chr3.1:64563390-64563409 None:intergenic 35.0%
GCAAGGAAAACATGACTAAT+AGG + chr3.1:64564197-64564216 MS.gene70575:intron 35.0%
GCACACAAAGTGATAAAAAG+AGG + chr3.1:64560643-64560662 MS.gene70575:intron 35.0%
GGTGCTAAGGTTGAATAATA+TGG - chr3.1:64562635-64562654 None:intergenic 35.0%
GTGCTCTTCATTGTATTTGA+TGG + chr3.1:64560295-64560314 MS.gene70575:intron 35.0%
GTGTTCAAGATTATGTCACA+TGG + chr3.1:64562272-64562291 MS.gene70575:intron 35.0%
GTTAATCCAAGTACAACAAC+GGG + chr3.1:64565166-64565185 MS.gene70575:CDS 35.0%
GTTGTTGTACTTGGATTAAC+TGG - chr3.1:64565166-64565185 None:intergenic 35.0%
TAAAGCGGATATAGGTATGA+GGG - chr3.1:64562945-64562964 None:intergenic 35.0%
TAGCAAACCCAATCTTTGTT+TGG + chr3.1:64561832-64561851 MS.gene70575:intron 35.0%
TCCTCCAACCAATACATTTA+TGG + chr3.1:64562701-64562720 MS.gene70575:intron 35.0%
TCTAAGAGCAAAAGGAGAAA+AGG - chr3.1:64562405-64562424 None:intergenic 35.0%
TCTTGTGTAGTAGGTATGAA+AGG + chr3.1:64564128-64564147 MS.gene70575:intron 35.0%
TGGAGGAAGGTAATTATGAA+GGG - chr3.1:64562688-64562707 None:intergenic 35.0%
TGGTAATATAGGGAAAGTTG+AGG - chr3.1:64564855-64564874 None:intergenic 35.0%
TGGTTAAGTGAGTAGAGATT+GGG + chr3.1:64560777-64560796 MS.gene70575:intron 35.0%
TGTTCTGCCCAAACAAAAAT+TGG - chr3.1:64560609-64560628 None:intergenic 35.0%
TTGCCAATAACACCTTACTT+AGG + chr3.1:64565055-64565074 MS.gene70575:CDS 35.0%
TTGGACTGCATTAAGGTTTA+AGG + chr3.1:64565414-64565433 MS.gene70575:CDS 35.0%
TTGGAGGAAGGTAATTATGA+AGG - chr3.1:64562689-64562708 None:intergenic 35.0%
TTGGTAGATGTGCAAATCTA+TGG + chr3.1:64564288-64564307 MS.gene70575:intron 35.0%
TTTGTAGATTGGAACTCCTT+GGG + chr3.1:64561001-64561020 MS.gene70575:intron 35.0%
! AAACTTTTCTGATGAACACC+TGG - chr3.1:64565343-64565362 None:intergenic 35.0%
! AGCAAACCCAATCTTTGTTT+GGG + chr3.1:64561833-64561852 MS.gene70575:intron 35.0%
! CAACTTCAGCTCTAATAGTT+GGG - chr3.1:64560051-64560070 None:intergenic 35.0%
! CCTGGTACATATTTCTATCA+TGG + chr3.1:64561299-64561318 MS.gene70575:CDS 35.0%
! GAATAGGAAGGGTATAGTAA+AGG - chr3.1:64562763-64562782 None:intergenic 35.0%
! TTAGAAAGCGTAGCATAAAG+CGG - chr3.1:64562960-64562979 None:intergenic 35.0%
! TTTGAAATTGCATTGAGGCA+GGG - chr3.1:64563931-64563950 None:intergenic 35.0%
! TTTTGTAGATTGGAACTCCT+TGG + chr3.1:64561000-64561019 MS.gene70575:intron 35.0%
!! ACGCTTTCTAAAAGTGTTTC+TGG + chr3.1:64562969-64562988 MS.gene70575:intron 35.0%
!! AGGTGTTATTGGCAATGTTA+AGG - chr3.1:64565050-64565069 None:intergenic 35.0%
!! ATCATAATGTATGGTGGGTT+AGG - chr3.1:64563833-64563852 None:intergenic 35.0%
!! ATCTTTGTTTGGGAGTTTTG+AGG + chr3.1:64561843-64561862 MS.gene70575:intron 35.0%
!! ATTCAAAGGCACTCTCATAT+GGG + chr3.1:64562903-64562922 MS.gene70575:intron 35.0%
!! CAAAGATTGGGTTTGCTATA+AGG - chr3.1:64561830-64561849 None:intergenic 35.0%
!! CTGAGGGTGTTCATAAAATT+GGG + chr3.1:64565512-64565531 MS.gene70575:CDS 35.0%
!! TAAAAGTGTTTCTGGCTTTG+AGG + chr3.1:64562977-64562996 MS.gene70575:intron 35.0%
!! TAAATGTATTGGTTGGAGGA+AGG - chr3.1:64562701-64562720 None:intergenic 35.0%
!! TATTCAAAGGCACTCTCATA+TGG + chr3.1:64562902-64562921 MS.gene70575:intron 35.0%
!! TCCATAAATGTATTGGTTGG+AGG - chr3.1:64562705-64562724 None:intergenic 35.0%
!! TCTTTGTTTGGGAGTTTTGA+GGG + chr3.1:64561844-64561863 MS.gene70575:intron 35.0%
!! TGATTGGTGGTGGTAATATA+GGG - chr3.1:64564865-64564884 None:intergenic 35.0%
!!! AATGGGTGTTATTTTTGCTG+AGG + chr3.1:64565495-64565514 MS.gene70575:CDS 35.0%
!!! ATGGGTGTTATTTTTGCTGA+GGG + chr3.1:64565496-64565515 MS.gene70575:CDS 35.0%
!!! CGATTTTGTTTTGTGTGTTG+AGG - chr3.1:64564994-64565013 None:intergenic 35.0%
!!! GATTTTTGGGTTTTGGGATA+TGG + chr3.1:64565301-64565320 MS.gene70575:CDS 35.0%
!!! GGACATGATTTTTGGGTTTT+GGG + chr3.1:64565295-64565314 MS.gene70575:CDS 35.0%
!!! TGGACATGATTTTTGGGTTT+TGG + chr3.1:64565294-64565313 MS.gene70575:CDS 35.0%
!!! TTTTAGAGCTTGCTCATCAA+TGG + chr3.1:64563858-64563877 MS.gene70575:intron 35.0%
!!! TTTTGTTTTGTGTGTTGAGG+AGG - chr3.1:64564991-64565010 None:intergenic 35.0%
AAAGCGGATATAGGTATGAG+GGG - chr3.1:64562944-64562963 None:intergenic 40.0%
AAGATCCCAACCAAAACTAC+TGG + chr3.1:64564753-64564772 MS.gene70575:CDS 40.0%
AATATAGGGAAAGTTGAGGC+AGG - chr3.1:64564851-64564870 None:intergenic 40.0%
AATATGGTGTGTGTGTGGAT+TGG - chr3.1:64562574-64562593 None:intergenic 40.0%
AATGAAATGCCCAAACACCA+GGG - chr3.1:64565447-64565466 None:intergenic 40.0%
ACAACATGCTCTATGCAATC+TGG - chr3.1:64560001-64560020 None:intergenic 40.0%
AGCGAGCCATTTCATTATGA+TGG + chr3.1:64561389-64561408 MS.gene70575:CDS 40.0%
AGGAGAGGTAAAGACCATAT+GGG + chr3.1:64560517-64560536 MS.gene70575:intron 40.0%
AGTAAAGGGTTAAGGGAGAA+AGG + chr3.1:64560548-64560567 MS.gene70575:intron 40.0%
AGTTCACAAGAACAAGAGGT+TGG + chr3.1:64561449-64561468 MS.gene70575:CDS 40.0%
ATAACTGCAGTGTTCCTCAA+AGG - chr3.1:64565382-64565401 None:intergenic 40.0%
ATATAGGGAAAGTTGAGGCA+GGG - chr3.1:64564850-64564869 None:intergenic 40.0%
ATATGGGTGAGAGAGAGTAA+AGG + chr3.1:64560533-64560552 MS.gene70575:intron 40.0%
ATATGGTGTGTGTGTGGATT+GGG - chr3.1:64562573-64562592 None:intergenic 40.0%
ATTATTATATGTAGGGGCCG+GGG + chr3.1:64563157-64563176 MS.gene70575:intron 40.0%
CACAAGTTCACAAGAACAAG+AGG + chr3.1:64561445-64561464 MS.gene70575:CDS 40.0%
CAGAAGGAACTGTTATTCAC+TGG + chr3.1:64560110-64560129 MS.gene70575:CDS 40.0%
CATAATGAAATGGCTCGCTT+TGG - chr3.1:64561388-64561407 None:intergenic 40.0%
CATTATTATATGTAGGGGCC+GGG + chr3.1:64563156-64563175 MS.gene70575:intron 40.0%
CATTGAACCACATTTGCATC+TGG + chr3.1:64565471-64565490 MS.gene70575:CDS 40.0%
CCAACTATTAGAGCTGAAGT+TGG + chr3.1:64560049-64560068 MS.gene70575:CDS 40.0%
CCGCACTTATTCACCTTATA+AGG + chr3.1:64563195-64563214 MS.gene70575:intron 40.0%
CCTCAATGCAATTTCAAAGG+TGG + chr3.1:64563933-64563952 MS.gene70575:CDS 40.0%
CGTGTGGGTGTTTAATCATA+TGG + chr3.1:64561271-64561290 MS.gene70575:intron 40.0%
CTATGCTATCAACCGTGAAT+GGG - chr3.1:64564688-64564707 None:intergenic 40.0%
CTGCCTCAATGCAATTTCAA+AGG + chr3.1:64563930-64563949 MS.gene70575:CDS 40.0%
CTTAATGCAGTCCAACCATA+AGG - chr3.1:64565409-64565428 None:intergenic 40.0%
CTTATGGTTGGACTGCATTA+AGG + chr3.1:64565407-64565426 MS.gene70575:CDS 40.0%
GAAGGAAAATCAGTTATGGG+AGG - chr3.1:64562493-64562512 None:intergenic 40.0%
GAATGGAGCTATAATACTGG+TGG - chr3.1:64562550-64562569 None:intergenic 40.0%
GACTGTAGCCATGATTGTAT+AGG - chr3.1:64562798-64562817 None:intergenic 40.0%
GAGAGAGAGTAAAGGGTTAA+GGG + chr3.1:64560541-64560560 MS.gene70575:intron 40.0%
GATAGCATAGACATCTACTC+AGG + chr3.1:64564698-64564717 MS.gene70575:CDS 40.0%
GCATTATTATATGTAGGGGC+CGG + chr3.1:64563155-64563174 MS.gene70575:intron 40.0%
GGAGGAGATTAAGTGGAATA+TGG - chr3.1:64562590-64562609 None:intergenic 40.0%
GGTTGAATAATATGGGTGAG+AGG - chr3.1:64562627-64562646 None:intergenic 40.0%
GTAGAGCTGAAATGGTGTTT+GGG - chr3.1:64562730-64562749 None:intergenic 40.0%
GTATAGTAAAGGTTGGGTGA+TGG - chr3.1:64562752-64562771 None:intergenic 40.0%
GTTCACGAAATTAGCTGCTA+GGG - chr3.1:64563904-64563923 None:intergenic 40.0%
TATGGGTGAGAGAGAGTAAA+GGG + chr3.1:64560534-64560553 MS.gene70575:intron 40.0%
TCAAATGGGAATCTATCTGG+TGG - chr3.1:64565124-64565143 None:intergenic 40.0%
TCTATGCTATCAACCGTGAA+TGG - chr3.1:64564689-64564708 None:intergenic 40.0%
TCTCAGTGTGCTATAAATCC+AGG + chr3.1:64561044-64561063 MS.gene70575:CDS 40.0%
TGAATAATATGGGTGAGAGG+TGG - chr3.1:64562624-64562643 None:intergenic 40.0%
TGAGAGAGAGTAAAGGGTTA+AGG + chr3.1:64560540-64560559 MS.gene70575:intron 40.0%
TGCATAGAGCATGTTGTGAT+GGG + chr3.1:64560004-64560023 MS.gene70575:CDS 40.0%
TGTTCACGAAATTAGCTGCT+AGG - chr3.1:64563905-64563924 None:intergenic 40.0%
TGTTGAGGAGGTAAATTGTG+CGG - chr3.1:64564979-64564998 None:intergenic 40.0%
TTAAGGATTGTTAGGGCTTG+TGG - chr3.1:64564815-64564834 None:intergenic 40.0%
TTGCATAGAGCATGTTGTGA+TGG + chr3.1:64560003-64560022 MS.gene70575:CDS 40.0%
TTTAATCATATGGTGCAGCC+TGG + chr3.1:64561281-64561300 MS.gene70575:intron 40.0%
TTTACTCTCTCTCACCCATA+TGG - chr3.1:64560534-64560553 None:intergenic 40.0%
! AATGGAGAACTTTAGAGGGT+TGG + chr3.1:64561903-64561922 MS.gene70575:intron 40.0%
! AGGAAGGGTATAGTAAAGGT+TGG - chr3.1:64562759-64562778 None:intergenic 40.0%
! ATGGAGAACTTTAGAGGGTT+GGG + chr3.1:64561904-64561923 MS.gene70575:intron 40.0%
! CATGTTGTGATGGGAATCAA+TGG + chr3.1:64560013-64560032 MS.gene70575:CDS 40.0%
! CCAACTTCAGCTCTAATAGT+TGG - chr3.1:64560052-64560071 None:intergenic 40.0%
! GCTCCTAAGTAAGGTGTTAT+TGG - chr3.1:64565061-64565080 None:intergenic 40.0%
! GGAAGGGTATAGTAAAGGTT+GGG - chr3.1:64562758-64562777 None:intergenic 40.0%
! TATTTGATGGTTGACGGACA+AGG + chr3.1:64560308-64560327 MS.gene70575:intron 40.0%
!! ACTAGGGTTCTAAGAGCAAA+AGG - chr3.1:64562413-64562432 None:intergenic 40.0%
!! CAAAACTACTGGCTCTCAAT+CGG + chr3.1:64564764-64564783 MS.gene70575:CDS 40.0%
!! CCACCTTTGAAATTGCATTG+AGG - chr3.1:64563936-64563955 None:intergenic 40.0%
!! CTTTGAAATTGCATTGAGGC+AGG - chr3.1:64563932-64563951 None:intergenic 40.0%
!! GCTGAGGGTGTTCATAAAAT+TGG + chr3.1:64565511-64565530 MS.gene70575:CDS 40.0%
!! GGTGTTGTTTAGGAACATCT+TGG - chr3.1:64565575-64565594 None:intergenic 40.0%
!! GTGATTGGTGGTGGTAATAT+AGG - chr3.1:64564866-64564885 None:intergenic 40.0%
!! TATTTTGTAATGGGGAGGCT+TGG + chr3.1:64564345-64564364 MS.gene70575:intron 40.0%
!! TTTTTGGTCAGGTAGCTTAG+TGG - chr3.1:64563231-64563250 None:intergenic 40.0%
!!! AGTAGTTTTGGTTGGGATCT+TGG - chr3.1:64564754-64564773 None:intergenic 40.0%
AAACTACGTGCACCCATTCA+CGG + chr3.1:64564673-64564692 MS.gene70575:CDS 45.0%
AAGAAAAACCATTGCTGGCC+TGG - chr3.1:64561177-64561196 None:intergenic 45.0%
AATGGCTCGCTTTGGTTGTT+TGG - chr3.1:64561380-64561399 None:intergenic 45.0%
AATGGGAATCTATCTGGTGG+TGG - chr3.1:64565121-64565140 None:intergenic 45.0%
ACCAACAAGCTCTCTACAGA+AGG + chr3.1:64560094-64560113 MS.gene70575:CDS 45.0%
ACCACATTTGCATCTGGGAA+TGG + chr3.1:64565477-64565496 MS.gene70575:CDS 45.0%
AGAGAGACAGGGAGTAAAGA+TGG + chr3.1:64560582-64560601 MS.gene70575:intron 45.0%
AGTGGAATATGGTGTGTGTG+TGG - chr3.1:64562579-64562598 None:intergenic 45.0%
ATACTGGTGGTTGCATTGTG+AGG - chr3.1:64562537-64562556 None:intergenic 45.0%
ATCTGCTTCCACCACAACAA+GGG - chr3.1:64564651-64564670 None:intergenic 45.0%
ATTACAAGTGGAGGTGGTTG+TGG - chr3.1:64563439-64563458 None:intergenic 45.0%
ATTTGACACGTGCACCTTTG+AGG + chr3.1:64565365-64565384 MS.gene70575:CDS 45.0%
CAATGAAATGCCCAAACACC+AGG - chr3.1:64565448-64565467 None:intergenic 45.0%
CCAAGTACAACAACGGGTAA+CGG + chr3.1:64565172-64565191 MS.gene70575:CDS 45.0%
CCACATTTGCATCTGGGAAT+GGG + chr3.1:64565478-64565497 MS.gene70575:CDS 45.0%
CCTACACATGCTCTTACTTG+TGG + chr3.1:64565541-64565560 MS.gene70575:CDS 45.0%
CGCTCGAAATCGTTCCATAA+GGG - chr3.1:64564890-64564909 None:intergenic 45.0%
CTACCAACTAGCTATGCTCA+CGG - chr3.1:64563129-64563148 None:intergenic 45.0%
CTACTCAGTCCTTCTACACA+CGG + chr3.1:64564727-64564746 MS.gene70575:CDS 45.0%
GAGAGAGATCGAAGATGAGT+AGG + chr3.1:64560478-64560497 MS.gene70575:intron 45.0%
GAGGAGAGGTAAAGACCATA+TGG + chr3.1:64560516-64560535 MS.gene70575:intron 45.0%
GCGTAGCATAAAGCGGATAT+AGG - chr3.1:64562953-64562972 None:intergenic 45.0%
GCTTGCTCATCAATGGAAGA+GGG + chr3.1:64563865-64563884 MS.gene70575:CDS 45.0%
GGAACTGTTATTCACTGGCA+TGG + chr3.1:64560115-64560134 MS.gene70575:CDS 45.0%
GGAATCAATGGTCAGTTTCC+TGG + chr3.1:64560025-64560044 MS.gene70575:CDS 45.0%
GGGGAATGGAGCTATAATAC+TGG - chr3.1:64562553-64562572 None:intergenic 45.0%
GGTAGAGCTGAAATGGTGTT+TGG - chr3.1:64562731-64562750 None:intergenic 45.0%
GGTGAAGGGAAATTTCAACC+AGG + chr3.1:64565322-64565341 MS.gene70575:CDS 45.0%
GTAGAATCACACCCTTGTTG+TGG + chr3.1:64564637-64564656 MS.gene70575:intron 45.0%
GTCCTTAGCTTCTCTCAACT+TGG + chr3.1:64564028-64564047 MS.gene70575:CDS 45.0%
GTTCACCAACCCATCTCATT+GGG - chr3.1:64561487-64561506 None:intergenic 45.0%
GTTCATCCATGGCATTTGCA+TGG + chr3.1:64565274-64565293 MS.gene70575:CDS 45.0%
TACCAACTAGCTATGCTCAC+GGG - chr3.1:64563128-64563147 None:intergenic 45.0%
TCAAGTGGCATATATCTCCC+AGG + chr3.1:64561156-64561175 MS.gene70575:intron 45.0%
TCATGTCCATGCAAATGCCA+TGG - chr3.1:64565283-64565302 None:intergenic 45.0%
TCCTTCTGTAGAGAGCTTGT+TGG - chr3.1:64560098-64560117 None:intergenic 45.0%
TCGTTCCATAAGGGAGTGAT+TGG - chr3.1:64564881-64564900 None:intergenic 45.0%
TGCACATGGAGGAGATTAAG+TGG - chr3.1:64562597-64562616 None:intergenic 45.0%
TGGAGCTGAAATAGGTGCTA+AGG - chr3.1:64562648-64562667 None:intergenic 45.0%
TTCACCAACCCATCTCATTG+GGG - chr3.1:64561486-64561505 None:intergenic 45.0%
TTCCATAAGGGAGTGATTGG+TGG - chr3.1:64564878-64564897 None:intergenic 45.0%
! AGAAAAACCATTGCTGGCCT+GGG - chr3.1:64561176-64561195 None:intergenic 45.0%
! AGCTTGCTCATCAATGGAAG+AGG + chr3.1:64563864-64563883 MS.gene70575:CDS 45.0%
! ATTGTGCGGTCTGCGATTTT+TGG - chr3.1:64564965-64564984 None:intergenic 45.0%
! CAAGGCTCTCTTTGAGAGTT+GGG - chr3.1:64562107-64562126 None:intergenic 45.0%
! CCACAAGTAAGAGCATGTGT+AGG - chr3.1:64565544-64565563 None:intergenic 45.0%
! CGATTGAGAGCCAGTAGTTT+TGG - chr3.1:64564766-64564785 None:intergenic 45.0%
! GAAGGGTATGGGTTTGATGA+TGG - chr3.1:64562671-64562690 None:intergenic 45.0%
! GTTGGTGAGGTCAATGACAA+CGG - chr3.1:64560080-64560099 None:intergenic 45.0%
! TATGGTGTGTGTGTGGATTG+GGG - chr3.1:64562572-64562591 None:intergenic 45.0%
! TCTTAAACGGCTAGTTGAGC+TGG - chr3.1:64564324-64564343 None:intergenic 45.0%
!! GATGATGGTGGAGCTGAAAT+AGG - chr3.1:64562656-64562675 None:intergenic 45.0%
!! TATGGGAGGGTTTTGTGATC+AGG - chr3.1:64562479-64562498 None:intergenic 45.0%
!! TGGCTTTGAGGCTATTGCTT+AGG + chr3.1:64562989-64563008 MS.gene70575:intron 45.0%
!! TTAATCTGAACTGGTGCTGC+TGG + chr3.1:64563567-64563586 MS.gene70575:intron 45.0%
!!! GAGAGCCAGTAGTTTTGGTT+GGG - chr3.1:64564761-64564780 None:intergenic 45.0%
!!! GGGTTTTGGGATATGGTGAA+GGG + chr3.1:64565308-64565327 MS.gene70575:CDS 45.0%
!!! TCTGCGATTTTTGGTGTCTG+TGG - chr3.1:64564956-64564975 None:intergenic 45.0%
!!! TGAGAGCCAGTAGTTTTGGT+TGG - chr3.1:64564762-64564781 None:intergenic 45.0%
!!! TGGGTTTTGGGATATGGTGA+AGG + chr3.1:64565307-64565326 MS.gene70575:CDS 45.0%
!! TTATAATAATATAATAACTA+GGG + chr3.1:64561227-64561246 MS.gene70575:intron 5.0%
!! TTTATAATAATATAATAACT+AGG + chr3.1:64561226-64561245 MS.gene70575:intron 5.0%
AAGCAAGAGAGGAAGAGGAG+AGG + chr3.1:64560502-64560521 MS.gene70575:intron 50.0%
AATGAGTATGGAGTGGGTGC+AGG - chr3.1:64562830-64562849 None:intergenic 50.0%
AGGTGAATAAGTGCGGTGTC+CGG - chr3.1:64563191-64563210 None:intergenic 50.0%
ATCTCATTGGGGCTGAAGAG+AGG - chr3.1:64561475-64561494 None:intergenic 50.0%
ATCTGCTCCTCAGTGATCTG+TGG + chr3.1:64561420-64561439 MS.gene70575:CDS 50.0%
ATTGGAACTCCTTGGGCTGA+TGG + chr3.1:64561008-64561027 MS.gene70575:CDS 50.0%
CACCACCAATCACTCCCTTA+TGG + chr3.1:64564873-64564892 MS.gene70575:CDS 50.0%
CATAAGGGAGTGATTGGTGG+TGG - chr3.1:64564875-64564894 None:intergenic 50.0%
CATCTGCTTCCACCACAACA+AGG - chr3.1:64564652-64564671 None:intergenic 50.0%
CATGAGAGTGGAGAGAGACA+GGG + chr3.1:64560571-64560590 MS.gene70575:intron 50.0%
CCCATTCCCAGATGCAAATG+TGG - chr3.1:64565481-64565500 None:intergenic 50.0%
CCGTTACCCGTTGTTGTACT+TGG - chr3.1:64565175-64565194 None:intergenic 50.0%
CGTGAGCATAGCTAGTTGGT+AGG + chr3.1:64563127-64563146 MS.gene70575:intron 50.0%
CGTGTGTAGAAGGACTGAGT+AGG - chr3.1:64564729-64564748 None:intergenic 50.0%
CTCTTCAGCCCCAATGAGAT+GGG + chr3.1:64561475-64561494 MS.gene70575:CDS 50.0%
GAAATTGCATTGAGGCAGGG+TGG - chr3.1:64563928-64563947 None:intergenic 50.0%
GATCTTGGTCCGTGTGTAGA+AGG - chr3.1:64564739-64564758 None:intergenic 50.0%
GATGAGTAGGCAAGCAAGAG+AGG + chr3.1:64560491-64560510 MS.gene70575:intron 50.0%
GCGCTCGAAATCGTTCCATA+AGG - chr3.1:64564891-64564910 None:intergenic 50.0%
GGACAATGAGACGAGGACTT+TGG - chr3.1:64562082-64562101 None:intergenic 50.0%
GGCGCTACTTCGAGAATCTT+GGG - chr3.1:64563972-64563991 None:intergenic 50.0%
GGTTCACCAACCCATCTCAT+TGG - chr3.1:64561488-64561507 None:intergenic 50.0%
TAGGCAAGCAAGAGAGGAAG+AGG + chr3.1:64560497-64560516 MS.gene70575:intron 50.0%
TATATCTCCCAGGCCAGCAA+TGG + chr3.1:64561166-64561185 MS.gene70575:intron 50.0%
TCACTGGCATGGAATCAGAC+AGG + chr3.1:64560126-64560145 MS.gene70575:CDS 50.0%
TCTCTTCAGCCCCAATGAGA+TGG + chr3.1:64561474-64561493 MS.gene70575:CDS 50.0%
TGAGAGGTGGAGTATGCACA+TGG - chr3.1:64562611-64562630 None:intergenic 50.0%
TGCAAATCTATGGCGTCGCA+TGG + chr3.1:64564298-64564317 MS.gene70575:intron 50.0%
TGGCGCTACTTCGAGAATCT+TGG - chr3.1:64563973-64563992 None:intergenic 50.0%
TGTCTGTGGTGTTCCCATTC+TGG - chr3.1:64564942-64564961 None:intergenic 50.0%
TTGTGTGCCACAGATCACTG+AGG - chr3.1:64561430-64561449 None:intergenic 50.0%
! AAGGGAGAAAGGCATGAGAG+TGG + chr3.1:64560559-64560578 MS.gene70575:intron 50.0%
! AGGTTTAAGGCAGACAACCC+TGG + chr3.1:64565427-64565446 MS.gene70575:CDS 50.0%
! CTATGCTCACGGGACCTTTT+TGG - chr3.1:64563118-64563137 None:intergenic 50.0%
! CTTGTTGTGGTGGAAGCAGA+TGG + chr3.1:64564650-64564669 MS.gene70575:CDS 50.0%
! GAATCACACCCTTGTTGTGG+TGG + chr3.1:64564640-64564659 MS.gene70575:intron 50.0%
! GCAAGGCTCTCTTTGAGAGT+TGG - chr3.1:64562108-64562127 None:intergenic 50.0%
! GCTCTCTTTGAGAGTTGGGA+GGG - chr3.1:64562103-64562122 None:intergenic 50.0%
! GGCCAAGTTGAGAGAAGCTA+AGG - chr3.1:64564033-64564052 None:intergenic 50.0%
! GGGTGATGGTAGAGCTGAAA+TGG - chr3.1:64562738-64562757 None:intergenic 50.0%
! TCAGCTCTAATAGTTGGGCC+AGG - chr3.1:64560046-64560065 None:intergenic 50.0%
!! CTGTAGAGAGCTTGTTGGTG+AGG - chr3.1:64560093-64560112 None:intergenic 50.0%
!! GGGTATGGGTTTGATGATGG+TGG - chr3.1:64562668-64562687 None:intergenic 50.0%
!! TGTGTGTGTGGATTGGGGAA+TGG - chr3.1:64562567-64562586 None:intergenic 50.0%
AAGTGAGTTCTCACCACCGC+TGG + chr3.1:64563413-64563432 MS.gene70575:intron 55.0%
AGGCAGACAACCCTGGTGTT+TGG + chr3.1:64565434-64565453 MS.gene70575:CDS 55.0%
ATGGCATGCAGAGAGCAGCA+GGG + chr3.1:64561327-64561346 MS.gene70575:CDS 55.0%
CAGAGAGCAGCAGGGTTGTA+TGG + chr3.1:64561335-64561354 MS.gene70575:CDS 55.0%
GAGGTGGAGTATGCACATGG+AGG - chr3.1:64562608-64562627 None:intergenic 55.0%
GCATGAGAGTGGAGAGAGAC+AGG + chr3.1:64560570-64560589 MS.gene70575:intron 55.0%
GGCAGACAACCCTGGTGTTT+GGG + chr3.1:64565435-64565454 MS.gene70575:CDS 55.0%
GGTGAATAAGTGCGGTGTCC+GGG - chr3.1:64563190-64563209 None:intergenic 55.0%
GTCCCGTGAGCATAGCTAGT+TGG + chr3.1:64563123-64563142 MS.gene70575:intron 55.0%
GTGAATAAGTGCGGTGTCCG+GGG - chr3.1:64563189-64563208 None:intergenic 55.0%
TATGGCATGCAGAGAGCAGC+AGG + chr3.1:64561326-64561345 MS.gene70575:CDS 55.0%
TCAGCCCCAATGAGATGGGT+TGG + chr3.1:64561479-64561498 MS.gene70575:CDS 55.0%
TTGGGAGGGACAATGAGACG+AGG - chr3.1:64562089-64562108 None:intergenic 55.0%
! GGCTCTCTTTGAGAGTTGGG+AGG - chr3.1:64562104-64562123 None:intergenic 55.0%
!! GAGATGGGTTGGTGAACCAC+AGG + chr3.1:64561490-64561509 MS.gene70575:CDS 55.0%
GAGTATGGAGTGGGTGCAGG+TGG - chr3.1:64562827-64562846 None:intergenic 60.0%
GCAGCAGTTCCATCAGCCCA+AGG - chr3.1:64561020-64561039 None:intergenic 60.0%
GTGGAGGTGGTTGTGGCCAG+CGG - chr3.1:64563432-64563451 None:intergenic 65.0%
GAGGTGGTTGTGGCCAGCGG+TGG - chr3.1:64563429-64563448 None:intergenic 70.0%
GGTGTCCGGGGTTCGAACCC+CGG - chr3.1:64563177-64563196 None:intergenic 70.0%
AGGGGCCGGGGTTCGAACCC+CGG + chr3.1:64563169-64563188 MS.gene70575:intron 75.0%


Chromosome Type Strat End Strand Name
chr3.1 gene 64559887 64565603 64559887 ID=MS.gene70575
chr3.1 mRNA 64559887 64565603 64559887 ID=MS.gene70575.t1;Parent=MS.gene70575
chr3.1 exon 64559887 64560147 64559887 ID=MS.gene70575.t1.exon1;Parent=MS.gene70575.t1
chr3.1 CDS 64559887 64560147 64559887 ID=cds.MS.gene70575.t1;Parent=MS.gene70575.t1
chr3.1 exon 64561008 64561100 64561008 ID=MS.gene70575.t1.exon2;Parent=MS.gene70575.t1
chr3.1 CDS 64561008 64561100 64561008 ID=cds.MS.gene70575.t1;Parent=MS.gene70575.t1
chr3.1 exon 64561299 64561511 64561299 ID=MS.gene70575.t1.exon3;Parent=MS.gene70575.t1
chr3.1 CDS 64561299 64561511 64561299 ID=cds.MS.gene70575.t1;Parent=MS.gene70575.t1
chr3.1 exon 64563864 64564058 64563864 ID=MS.gene70575.t1.exon4;Parent=MS.gene70575.t1
chr3.1 CDS 64563864 64564058 64563864 ID=cds.MS.gene70575.t1;Parent=MS.gene70575.t1
chr3.1 exon 64564641 64565603 64564641 ID=MS.gene70575.t1.exon5;Parent=MS.gene70575.t1
chr3.1 CDS 64564641 64565603 64564641 ID=cds.MS.gene70575.t1;Parent=MS.gene70575.t1
Gene Sequence

>MS.gene70575

ATGAGTTTGTTAAAAGCTGTTTTTGTTTGGTATATATGGTTAGGGTTATTTGAGTTATCATTAGCAAAAGTGAAACATTACAAGTTTGATGTGGAATACATGTACAAAACGCCAGATTGCATAGAGCATGTTGTGATGGGAATCAATGGTCAGTTTCCTGGCCCAACTATTAGAGCTGAAGTTGGTGACACCGTTGTCATTGACCTCACCAACAAGCTCTCTACAGAAGGAACTGTTATTCACTGGCATGGAATCAGACAGGTAAATTTTCTTTCTCTTATTCTAGATGTTTTAATCATCACAAGCTAAGTATAATTAACATTAGTGATGTCTTTGATTAGTAAAATGTTAAGTATTGCTCATAATAGTAACAGACGGTATTAAACTGTACATGAATTATTATTTTTTGTGCTCTTCATTGTATTTGATGGTTGACGGACAAGGCAAATAATTTTGTGATGCATCTTGTTTAATATTTCTATGTATTTGATAAAATAATATAACTTTTAATACAATACTTGATATATATATATATATATATGAATGTAAATATTCATAAAGATGAGGGAGGAAATAAAAATGATATCTAGGGAGAGAGATCGAAGATGAGTAGGCAAGCAAGAGAGGAAGAGGAGAGGTAAAGACCATATGGGTGAGAGAGAGTAAAGGGTTAAGGGAGAAAGGCATGAGAGTGGAGAGAGACAGGGAGTAAAGATGGACCAATTTTTGTTTGGGCAGAACAAAATGTATAGCCATGCACACAAAGTGATAAAAAGAGGCACATATTCTAAAAATGTTCGATCAATTTTTATTTTTTTTTTATTAGAGAGAAGCTATTTTTATATAGAAAATAAAATTATTATTTTGATAGTTTGTAAAAAGTTTTCTTATGGTTAAGTGAGTAGAGATTGGGACAAATTTTTTTTTTTGTTTTTGTTCAATATCTTGCTGTCTGTTTTATCCAATCTATGACCAATTTCTAAAAAAGTTCAAAGTAATTTTTTTTGTCAATTCATCGAGTTTTAAAATAAAATTAATGCACCTTATACATTTTTTGTTGTTTTTTTGGTAGGATACAATTTTTGTTGTTGTTTGCTAATTAAAATAATAATGTTTTGTAGATTGGAACTCCTTGGGCTGATGGAACTGCTGCAATCTCTCAGTGTGCTATAAATCCAGGAGAAACTTTTCATTACAGATTCATTGTTGACAGGGTAATTAATTAGTTAATTAATTAAATATTTGATTAGTTTAATCACTTATTTGAGATCAAGTGGCATATATCTCCCAGGCCAGCAATGGTTTTTCTTTTGTTGTTTTGTTTTTGAGTATCTTTTATTTTATAATAATATAATAACTAGGGCTAACATATATATGATATTAACGTGTGGGTGTTTAATCATATGGTGCAGCCTGGTACATATTTCTATCATGGACACTATGGCATGCAGAGAGCAGCAGGGTTGTATGGTTCTCTAATAGTAGATTTACCAAACAACCAAAGCGAGCCATTTCATTATGATGGTGAGTTTAATCTGCTCCTCAGTGATCTGTGGCACACAAGTTCACAAGAACAAGAGGTTGGCCTCTCTTCAGCCCCAATGAGATGGGTTGGTGAACCACAGGTATACTTTCAACTTTTTTAATACAAAAATATCATGTTCATTCAATTTACATTTTATTCATTTATGTTGTCAAATCTTAAAAATAGCTATATTTATCAATATAATAATAGAATAAAAATTTAATTCATATACATCGTTAGTATAAAAAAAAATTAGATCGTAAATCAATCACAACTGTTAAATCATTAAAAATGTTTGACATTTGTTTTTGTACTATCATAATAACTACTTTTAACGTTTGTTATGATGTTCAAATCCAAATCGATCCAAATTAAAACTACAAAAAGTCAAAGATTATTGCATGTCTTTATAATTCCTTATAGCAAACCCAATCTTTGTTTGGGAGTTTTGAGGGTAGAGCTTGTAAAAAAAGGAAGCAAGAATCATAAAGAATGGAGAACTTTAGAGGGTTGGGTTTTGTGTAAATTTTTAAATCCAATCTATCTTGTTATAATACTTAGAAGTAAAAAATAAATTAATCGTAAGTATTAATTTATTATTTTCTACAAAAACATTCTCTTAAAATTTTGAAAAATTTCTCAATTTTTCTACTCTAATTTCATCTCTCCAAAGTCCTCGTCTCATTGTCCCTCCCAACTCTCAAAGAGAGCCTTGCACGTTTTTATTGATCATTGTATTATTTATTACTCTAAACTTTTTATAACTAATTAACGTATATAAGACCTCTCTAAACGTTTTGTAATTTCTATGCTTCTGTTACTTTTCCCTATAAAATAATGTTTTTGGTACTTTTATTAGGGTGTTCAAGATTATGTCACATGGATAGCTATGAACTAGTTAGAATACTATATATTGAGTATATATGGTCTCAATAGACAGGGAATAAAAATGAATGAAAAAGTTATTTTAATTTTTTTAATTAGTTTTGTCCTTTTCTCCTTTTGCTCTTAGAACCCTAGTTTCCTTAGTGATATGTTTTAGATGGTATCAATTGGTGCTTCATCCTGATCACAAAACCCTCCCATAACTGATTTTCCTTCTACATATCCATATTACTCGATCCTCACAATGCAACCACCAGTATTATAGCTCCATTCCCCAATCCACACACACACCATATTCCACTTAATCTCCTCCATGTGCATACTCCACCTCTCACCCATATTATTCAACCTTAGCACCTATTTCAGCTCCACCATCATCAAACCCATACCCTTCATAATTACCTTCCTCCAACCAATACATTTATGGAAACCCAAACACCATTTCAGCTCTACCATCACCCAACCTTTACTATACCCTTCCTATTCAACTTCTTTCAACCTATACAATCATGGCTACAGTCTATATACCACCTGCACCCACTCCATACTCATTGTTAATAAGTTATTTTGGTCCATATGGTTTTCAACAACAATCTCATCTGGATTATTCAAAGGCACTCTCATATGGGAAATTTTTCAGTGTTCCCCTCATACCTATATCCGCTTTATGCTACGCTTTCTAAAAGTGTTTCTGGCTTTGAGGCTATTGCTTAGGTTGATGCCAATAATGCTTTGCTTTAAATCCAATTTAGATTGTTATAATACTCATAAGATTAAATATATTAATCATAACTCATAAGTATGCAATTAACATTGTACCAAAAAGGTCCCGTGAGCATAGCTAGTTGGTAGGACAATGCATTATTATATGTAGGGGCCGGGGTTCGAACCCCGGACACCGCACTTATTCACCTTATAAGGTAAATTCTAGCCACTAAGCTACCTGACCAAAAAAATAACACATTGTACCAAAAAAAAAGTATGCGATTAACATTATCTGAAAATCTGAAAAAAAATACTCTCTTAAATTTTTAAAAGATTTCTTTATTTTTTCTCTACTCTTATCCTCTAAAAATCACTATCTCATTTCCCTCTAAGCTTCCAAATTGAATCTTAAAGTGAGTTCTCACCACCGCTGGCCACAACCACCTCCACTTGTAATATTTTCTTTTTCAACAGCACATATTTGAAGAAAGAAATTTGAATTTGATTTTTATATTATTACAATAATGTATTTTTTTTATTAATAATATTTTATATTTTTATATTATTAATCTGAACTGGTGCTGCTGGATCTATATCCTTAGTTTATCCTTTAACTTTTAATAAAGGAAAACATATTTTTTAAAATAAATAAAACAAGTGAAAGCATCTTATTACAGTAAGTATTTTAAATTTCTACAAAAAAACAAAACAGTAAGTATTTTAAATAAAAGTAATACCATAAGATTAATTTAATCATGGATATGGTACCTAAACAACATTGTCTTTTTTCTTATTTATAATTGCATGCCTTATGAATGACATTTTTTTCCTAACCCACCATACATTATGATGACTTTTTTAGAGCTTGCTCATCAATGGAAGAGGGCAGTTCAATTGTTCCCTAGCAGCTAATTTCGTGAACACCACCCTGCCTCAATGCAATTTCAAAGGTGGTGAAGAATGCGCACCCAAGATTCTCGAAGTAGCGCCAAAAAAAACCTACAGAATTAGGATTGCAAGTACAACGTCCTTAGCTTCTCTCAACTTGGCCATTTCAGTAAGTTTTTGATCTATTTCTAGTTATGACCTACTAGATATATATTTGCATTATTTTACTATCTCTCTTTCTTGTGTAGTAGGTATGAAAGGTATACATTGTCTTACGTTACATAATTTATATTATTCCATTCGCATCGCAAGGAAAACATGACTAATAGGTCAAAGAAGTTAGAAAAATATATTTGAAAAAAATCGACAACAATCCTCGATTGTGTATAAAAAAATGTTTGGTAGATGTGCAAATCTATGGCGTCGCATGGCCAGCTCAACTAGCCGTTTAAGATTATTTTGTAATGGGGAGGCTTGGTTGTATGCACAACTCTTGCATGAATAGAACCTCAAATATATACTTTATTTGGATAGACATAATGATTAAAAAATTACAAGAGATATGATATTAAATTATGTGTCTTTTTTTATTTGTATTAAATCAATGTGAGTTTCACATTTTAGAAATAGATTTGACATAAAGTTATGTGACCTAAACTGATTTTATCGATGAACGTAGAGTTTTTTATTATGTTCATTATTATCATTCATTCATCAATTAACGGTGCGCCATAATTTTTGTGTCATGTAGAATCACACCCTTGTTGTGGTGGAAGCAGATGGAAACTACGTGCACCCATTCACGGTTGATAGCATAGACATCTACTCAGGCGAAACCTACTCAGTCCTTCTACACACGGACCAAGATCCCAACCAAAACTACTGGCTCTCAATCGGCATTATAAGCAGAAAATCAGACACACCACAAGCCCTAACAATCCTTAACTATAATACAAACCCTGCCTCAACTTTCCCTATATTACCACCACCAATCACTCCCTTATGGAACGATTTCGAGCGCAGCAAAGCATTCACAAAACAAATCATTTCCAGAATGGGAACACCACAGACACCAAAAATCGCAGACCGCACAATTTACCTCCTCAACACACAAAACAAAATCGGTAATTTCACTAAATGGGCTATTAATAATGTTTCCTTAACATTGCCAATAACACCTTACTTAGGAGCAATCAAATATAAACTAAACAATACATTTGATAGAAATCCACCACCAGATAGATTCCCATTTGATTTCGACATATTTAAAACTCCAGTTAATCCAAGTACAACAACGGGTAACGGTGTTTACACGTTTCACTTAAATGAGGTTGTTGATGTGATACTACAAAATGCAAACATGTTAAAAGATAATACTAGTGAAGTTCATCCATGGCATTTGCATGGACATGATTTTTGGGTTTTGGGATATGGTGAAGGGAAATTTCAACCAGGTGTTCATCAGAAAAGTTTGAATTTGACACGTGCACCTTTGAGGAACACTGCAGTTATATTTCCTTATGGTTGGACTGCATTAAGGTTTAAGGCAGACAACCCTGGTGTTTGGGCATTTCATTGTCACATTGAACCACATTTGCATCTGGGAATGGGTGTTATTTTTGCTGAGGGTGTTCATAAAATTGGGAACATACCTACACATGCTCTTACTTGTGGTGCTACAGCCAAGATGTTCCTAAACAACACCCACAACTGA
Protein sequence

>MS.gene70575.t1

MSLLKAVFVWYIWLGLFELSLAKVKHYKFDVEYMYKTPDCIEHVVMGINGQFPGPTIRAEVGDTVVIDLTNKLSTEGTVIHWHGIRQIGTPWADGTAAISQCAINPGETFHYRFIVDRPGTYFYHGHYGMQRAAGLYGSLIVDLPNNQSEPFHYDGEFNLLLSDLWHTSSQEQEVGLSSAPMRWVGEPQSLLINGRGQFNCSLAANFVNTTLPQCNFKGGEECAPKILEVAPKKTYRIRIASTTSLASLNLAISNHTLVVVEADGNYVHPFTVDSIDIYSGETYSVLLHTDQDPNQNYWLSIGIISRKSDTPQALTILNYNTNPASTFPILPPPITPLWNDFERSKAFTKQIISRMGTPQTPKIADRTIYLLNTQNKIGNFTKWAINNVSLTLPITPYLGAIKYKLNNTFDRNPPPDRFPFDFDIFKTPVNPSTTTGNGVYTFHLNEVVDVILQNANMLKDNTSEVHPWHLHGHDFWVLGYGEGKFQPGVHQKSLNLTRAPLRNTAVIFPYGWTALRFKADNPGVWAFHCHIEPHLHLGMGVIFAEGVHKIGNIPTHALTCGATAKMFLNNTHN