Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72840.t1 | XP_024639787.1 | 89.9 | 851 | 60 | 7 | 1 | 833 | 1 | 843 | 0.00E+00 | 1479.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72840.t1 | F4JSG3 | 51.2 | 821 | 332 | 11 | 1 | 805 | 1 | 768 | 1.2e-219 | 764.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72840.t1 | A0A396HQ15 | 89.9 | 851 | 60 | 7 | 1 | 833 | 1 | 843 | 0.0e+00 | 1479.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene72840 | MS.gene061260 | PPI |
| MS.gene07051 | MS.gene72840 | PPI |
| MS.gene61735 | MS.gene72840 | PPI |
| MS.gene072702 | MS.gene72840 | PPI |
| MS.gene72840 | MS.gene044021 | PPI |
| MS.gene24383 | MS.gene72840 | PPI |
| MS.gene041861 | MS.gene72840 | PPI |
| MS.gene04418 | MS.gene72840 | PPI |
| MS.gene062778 | MS.gene72840 | PPI |
| MS.gene22500 | MS.gene72840 | PPI |
| MS.gene05640 | MS.gene72840 | PPI |
| MS.gene72840 | MS.gene041794 | PPI |
| MS.gene72840 | MS.gene67108 | PPI |
| MS.gene28807 | MS.gene72840 | PPI |
| MS.gene04079 | MS.gene72840 | PPI |
| MS.gene61736 | MS.gene72840 | PPI |
| MS.gene08109 | MS.gene72840 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72840.t1 | MTR_2g041270 | 62.069 | 464 | 174 | 2 | 257 | 719 | 165 | 627 | 0.0 | 627 |
| MS.gene72840.t1 | MTR_2g041270 | 38.158 | 152 | 86 | 3 | 1 | 148 | 1 | 148 | 9.23e-23 | 104 |
| MS.gene72840.t1 | MTR_3g047950 | 50.716 | 489 | 210 | 5 | 242 | 717 | 113 | 583 | 4.88e-167 | 507 |
| MS.gene72840.t1 | MTR_3g047950 | 31.677 | 161 | 98 | 4 | 1 | 153 | 1 | 157 | 8.34e-13 | 72.8 |
| MS.gene72840.t1 | MTR_4g109580 | 34.937 | 478 | 288 | 8 | 248 | 716 | 151 | 614 | 1.02e-83 | 281 |
| MS.gene72840.t1 | MTR_4g109580 | 36.562 | 413 | 240 | 7 | 248 | 651 | 151 | 550 | 3.80e-76 | 259 |
| MS.gene72840.t1 | MTR_5g026880 | 73.944 | 142 | 23 | 2 | 1 | 142 | 1 | 128 | 4.64e-61 | 203 |
| MS.gene72840.t1 | MTR_4g109590 | 24.427 | 262 | 155 | 7 | 444 | 694 | 18 | 247 | 2.13e-17 | 83.6 |
| MS.gene72840.t1 | MTR_2g048560 | 21.834 | 458 | 318 | 17 | 271 | 710 | 3 | 438 | 6.70e-14 | 75.9 |
| MS.gene72840.t1 | MTR_4g070090 | 22.642 | 371 | 261 | 13 | 285 | 647 | 42 | 394 | 1.74e-13 | 74.3 |
| MS.gene72840.t1 | MTR_5g048670 | 40.496 | 121 | 57 | 3 | 4 | 123 | 232 | 338 | 2.97e-13 | 72.8 |
| MS.gene72840.t1 | MTR_5g048670 | 33.333 | 144 | 81 | 3 | 1 | 141 | 3 | 134 | 7.92e-13 | 71.6 |
| MS.gene72840.t1 | MTR_5g027390 | 22.632 | 380 | 262 | 15 | 342 | 704 | 62 | 426 | 4.57e-13 | 73.2 |
| MS.gene72840.t1 | MTR_5g078250 | 21.260 | 381 | 279 | 11 | 276 | 650 | 8 | 373 | 4.81e-12 | 70.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72840.t1 | AT5G45400 | 51.155 | 866 | 346 | 23 | 1 | 811 | 1 | 844 | 0.0 | 821 |
| MS.gene72840.t1 | AT4G19130 | 50.782 | 831 | 334 | 11 | 1 | 812 | 1 | 775 | 0.0 | 793 |
| MS.gene72840.t1 | AT4G19130 | 50.782 | 831 | 334 | 11 | 1 | 812 | 2 | 776 | 0.0 | 793 |
| MS.gene72840.t1 | AT2G06510 | 47.133 | 715 | 299 | 10 | 1 | 713 | 1 | 638 | 0.0 | 654 |
| MS.gene72840.t1 | AT2G06510 | 47.529 | 688 | 286 | 9 | 28 | 713 | 1 | 615 | 0.0 | 643 |
| MS.gene72840.t1 | AT5G08020 | 35.484 | 465 | 282 | 7 | 260 | 715 | 144 | 599 | 9.31e-90 | 297 |
| MS.gene72840.t1 | AT5G61000 | 34.565 | 460 | 283 | 7 | 260 | 710 | 168 | 618 | 1.09e-81 | 276 |
| MS.gene72840.t1 | AT1G52950 | 20.899 | 445 | 300 | 17 | 276 | 693 | 10 | 429 | 7.11e-14 | 75.9 |
Find 222 sgRNAs with CRISPR-Local
Find 299 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTGGGAAATTTCCAATTT+TGG | 0.119994 | 5.1:+17561975 | MS.gene72840:CDS |
| CTTCCAACTGGTAGAGATTA+TGG | 0.230120 | 5.1:+17562786 | MS.gene72840:CDS |
| TCTTCCTGTAGGCGCTCTAT+TGG | 0.253282 | 5.1:-17561350 | None:intergenic |
| CTTCCTGTAGGCGCTCTATT+GGG | 0.253925 | 5.1:-17561349 | None:intergenic |
| TACTGACTCACTTGATTTGC+TGG | 0.254019 | 5.1:-17562813 | None:intergenic |
| CATTGCCACCAGCCAATTAT+TGG | 0.268493 | 5.1:+17562047 | MS.gene72840:CDS |
| AGTTGATTTGGATGTTATAA+TGG | 0.273134 | 5.1:+17560871 | MS.gene72840:CDS |
| CTGACTCCGGGCTCAGGTTT+AGG | 0.274242 | 5.1:-17561181 | None:intergenic |
| AATTATCATCATAGTTGATT+TGG | 0.277504 | 5.1:+17560859 | MS.gene72840:CDS |
| TTGGAACATTCCTCCCTTCC+TGG | 0.278845 | 5.1:-17562116 | None:intergenic |
| CAATCAGCTGCTGGTCAATT+AGG | 0.281184 | 5.1:+17560977 | MS.gene72840:CDS |
| TAGTTGATGCTTGTGATTAT+AGG | 0.281987 | 5.1:+17562391 | MS.gene72840:CDS |
| AATCAGGTTCTACCAATAAT+TGG | 0.283594 | 5.1:-17562059 | None:intergenic |
| GATTTCAATGGGAAGTCTAT+TGG | 0.292216 | 5.1:+17562021 | MS.gene72840:CDS |
| GGTGGATCGGGTGGTGCTTC+AGG | 0.308065 | 5.1:+17562996 | MS.gene72840:CDS |
| GGTGGATCGGGTGGTGCTTC+AGG | 0.308065 | 5.1:+17563095 | MS.gene72840:CDS |
| AGTTTCCGCAATCCACAATA+TGG | 0.311513 | 5.1:+17561253 | MS.gene72840:CDS |
| AAGAACGAGTTGGTTCATTC+TGG | 0.317308 | 5.1:+17560048 | MS.gene72840:CDS |
| TCCAGAGAATCATCTAGTTT+TGG | 0.320620 | 5.1:+17562150 | MS.gene72840:CDS |
| TGAGGTGCTGCACTCATATT+AGG | 0.320635 | 5.1:-17563164 | None:intergenic |
| AAATGTAGCTCTGCCATCTA+TGG | 0.324422 | 5.1:+17561066 | MS.gene72840:CDS |
| ATTGTCCACATATTCTGATA+TGG | 0.329169 | 5.1:-17561415 | None:intergenic |
| GATTGTGAAGGTGCTTCTTT+TGG | 0.329678 | 5.1:-17560929 | None:intergenic |
| TGAAGTCGGTAAAGTCTATC+TGG | 0.344159 | 5.1:+17561591 | MS.gene72840:CDS |
| GTAAAGTCTATCTGGTTTCC+AGG | 0.351168 | 5.1:+17561599 | MS.gene72840:CDS |
| CTGCAAAATATTTGCGACTC+TGG | 0.359343 | 5.1:+17561958 | MS.gene72840:CDS |
| AGTGCAGCCAACAGGGTATC+TGG | 0.363217 | 5.1:+17563074 | MS.gene72840:CDS |
| ATTTCAATGGGAAGTCTATT+GGG | 0.365569 | 5.1:+17562022 | MS.gene72840:CDS |
| GTAAAAGCCTCTGGAAAATC+AGG | 0.366700 | 5.1:-17562075 | None:intergenic |
| TTCTCCCTTAGCTGTTACTC+TGG | 0.367358 | 5.1:-17561443 | None:intergenic |
| AACTCTGCTATCAACACAAC+TGG | 0.376895 | 5.1:+17562753 | MS.gene72840:CDS |
| GCAAATCAAGTGAGTCAGTA+TGG | 0.378549 | 5.1:+17562816 | MS.gene72840:CDS |
| GGAGATGGCTGTTGGTTCAT+AGG | 0.381919 | 5.1:-17561319 | None:intergenic |
| TTTGCTTCATCAGGTGCTCC+TGG | 0.382615 | 5.1:+17562858 | MS.gene72840:CDS |
| ATGGGAAATGGCGCTGTGAC+AGG | 0.387651 | 5.1:+17562358 | MS.gene72840:CDS |
| AGATAGACAATGTAACAAAA+AGG | 0.387752 | 5.1:+17562320 | MS.gene72840:CDS |
| GCCTACTTCAACACGGTGTC+TGG | 0.388870 | 5.1:+17562975 | MS.gene72840:CDS |
| ATTACTCAAAATCAGCAGTA+TGG | 0.391142 | 5.1:+17563227 | MS.gene72840:CDS |
| AGTGTTTATTCTAACAGTTC+TGG | 0.391584 | 5.1:+17561118 | MS.gene72840:CDS |
| AGCTGGCTTCAGACTTCCCC+TGG | 0.391797 | 5.1:-17561617 | None:intergenic |
| GGCCAGACATGTCTTTCAAC+TGG | 0.394180 | 5.1:-17561882 | None:intergenic |
| ACCTGAACAGTCTGCTGGGG+GGG | 0.395896 | 5.1:+17562953 | MS.gene72840:CDS |
| ATCTGACTCTAAATCTCTTC+TGG | 0.395988 | 5.1:+17562683 | MS.gene72840:CDS |
| TCTCATGGAAACAGTAATAC+AGG | 0.398118 | 5.1:+17563188 | MS.gene72840:CDS |
| CTGTTGGCTGCACTCATACT+AGG | 0.400416 | 5.1:-17563065 | None:intergenic |
| TTGAACAGTGGTTCCCATAC+AGG | 0.401201 | 5.1:+17561025 | MS.gene72840:CDS |
| CAAATTAAAGATGAAAACTT+AGG | 0.402489 | 5.1:+17562201 | MS.gene72840:CDS |
| AATGCCAACAACCTGGTCAT+TGG | 0.404212 | 5.1:+17563030 | MS.gene72840:CDS |
| CTAGTATGAGTGCAGCCAAC+AGG | 0.404300 | 5.1:+17563066 | MS.gene72840:CDS |
| TAACATTAACACCACCTGTA+TGG | 0.410958 | 5.1:-17561039 | None:intergenic |
| CTATAGCAATGCCCGAGGTC+AGG | 0.412988 | 5.1:+17561474 | MS.gene72840:CDS |
| GCACATATAGATATCCAATC+AGG | 0.427836 | 5.1:-17562237 | None:intergenic |
| GCCAGAGTAAATGATTTCAA+TGG | 0.428857 | 5.1:+17562009 | MS.gene72840:CDS |
| TGTCTATCTCCTATCATGAT+AGG | 0.429287 | 5.1:-17562306 | None:intergenic |
| GGACTTCAGACAAGCCTGAT+TGG | 0.429546 | 5.1:+17562223 | MS.gene72840:CDS |
| CTGACCTCGGGCATTGCTAT+AGG | 0.430306 | 5.1:-17561473 | None:intergenic |
| TCGCCCAATGACCAGGTTGT+TGG | 0.431088 | 5.1:-17563034 | None:intergenic |
| ATGCAACCAGCCTGGACATT+GGG | 0.431785 | 5.1:+17563130 | MS.gene72840:CDS |
| ACCAAAACTAGATGATTCTC+TGG | 0.433948 | 5.1:-17562151 | None:intergenic |
| CAACACGGTGTCTGGTGGAT+CGG | 0.436146 | 5.1:+17562983 | MS.gene72840:CDS |
| AACAGACCAGCGTCAGTGAA+TGG | 0.438524 | 5.1:+17561208 | MS.gene72840:CDS |
| ATGCCAACAACCTGGTCATT+GGG | 0.439187 | 5.1:+17563031 | MS.gene72840:CDS |
| TGCAAAATATTTGCGACTCT+GGG | 0.439523 | 5.1:+17561959 | MS.gene72840:CDS |
| TTCAAACTGACTCCGGGCTC+AGG | 0.442196 | 5.1:-17561187 | None:intergenic |
| ACAGCTTGTCCTATCATGAT+AGG | 0.443787 | 5.1:+17562297 | MS.gene72840:CDS |
| AATACAGGGCAAGGAAGATA+TGG | 0.445354 | 5.1:+17563203 | MS.gene72840:CDS |
| ATATGGATTCAAAGCAGATA+TGG | 0.447181 | 5.1:-17561398 | None:intergenic |
| AACACGGTGTCTGGTGGATC+GGG | 0.447468 | 5.1:+17562984 | MS.gene72840:CDS |
| TCGACAATGGGGATGGGAAA+TGG | 0.450285 | 5.1:+17562346 | MS.gene72840:CDS |
| ACTGACTCACTTGATTTGCT+GGG | 0.450839 | 5.1:-17562812 | None:intergenic |
| TGCTATAAATGCAACCAGCC+TGG | 0.454319 | 5.1:+17563122 | MS.gene72840:CDS |
| CAATAATTGGCTGGTGGCAA+TGG | 0.462805 | 5.1:-17562046 | None:intergenic |
| CAATCTGCTGTGAGTCATGC+AGG | 0.465004 | 5.1:+17560947 | MS.gene72840:CDS |
| ACAGTCGGGCGATCCATAGA+TGG | 0.465241 | 5.1:-17561079 | None:intergenic |
| TTCCAACTGGTAGAGATTAT+GGG | 0.465749 | 5.1:+17562787 | MS.gene72840:CDS |
| CCGGGCTCAGGTTTAGGATA+AGG | 0.467204 | 5.1:-17561175 | None:intergenic |
| ATGGACAAATGTGACTTGAT+TGG | 0.468013 | 5.1:+17560890 | MS.gene72840:CDS |
| CCCCTCAGTGTAAAAGCCTC+TGG | 0.470072 | 5.1:-17562084 | None:intergenic |
| GAAGTGTTGAATTAACTGTA+TGG | 0.471291 | 5.1:+17561905 | MS.gene72840:CDS |
| GGAGGGCGGCGAGGACATCA+TGG | 0.471968 | 5.1:+17562473 | MS.gene72840:CDS |
| AACAGGGTATCTGGTGGATC+GGG | 0.472406 | 5.1:+17563083 | MS.gene72840:CDS |
| TGGTCTGTTCAAACTGACTC+CGG | 0.475304 | 5.1:-17561194 | None:intergenic |
| TGCTATCAACACAACTGGAC+CGG | 0.476610 | 5.1:+17562758 | MS.gene72840:CDS |
| GTTCAAGTTAAAAGTAAAAG+AGG | 0.480048 | 5.1:+17562593 | MS.gene72840:CDS |
| CCAGAGTAAATGATTTCAAT+GGG | 0.480347 | 5.1:+17562010 | MS.gene72840:CDS |
| ATTTAAAGAAATCATCAGTA+AGG | 0.480638 | 5.1:+17562551 | MS.gene72840:CDS |
| CATTGGCTTGCCCAATGTCC+AGG | 0.480988 | 5.1:-17563140 | None:intergenic |
| GCTATCAACACAACTGGACC+GGG | 0.486431 | 5.1:+17562759 | MS.gene72840:CDS |
| ATAGATGGCAGAGCTACATT+TGG | 0.492079 | 5.1:-17561064 | None:intergenic |
| TAAAGCCAGAGTAACAGCTA+AGG | 0.494515 | 5.1:+17561438 | MS.gene72840:CDS |
| CCCATTGAAATCATTTACTC+TGG | 0.495273 | 5.1:-17562010 | None:intergenic |
| GCAGATATGGGAATTATCCT+TGG | 0.497877 | 5.1:-17561385 | None:intergenic |
| AACATTAACACCACCTGTAT+GGG | 0.498510 | 5.1:-17561038 | None:intergenic |
| CTCCAGTTGAAAGACATGTC+TGG | 0.498906 | 5.1:+17561880 | MS.gene72840:CDS |
| CGGAAATTGTAAATCTGTTG+TGG | 0.499119 | 5.1:-17561733 | None:intergenic |
| ATCCACCTGAACAGTCTGCT+GGG | 0.501379 | 5.1:+17562949 | MS.gene72840:CDS |
| GGTCAATTAGGAAGCAATGC+TGG | 0.501871 | 5.1:+17560989 | MS.gene72840:CDS |
| TTCCTGTAGGCGCTCTATTG+GGG | 0.505036 | 5.1:-17561348 | None:intergenic |
| ACAGACCAGCGTCAGTGAAT+GGG | 0.506395 | 5.1:+17561209 | MS.gene72840:CDS |
| TCAGGTTTAGGATAAGGTGG+AGG | 0.506527 | 5.1:-17561169 | None:intergenic |
| CAGTCCTTCGCCCAATGACC+AGG | 0.506994 | 5.1:-17563041 | None:intergenic |
| ATTCCTACCAAGGAGAAATA+CGG | 0.508478 | 5.1:+17561524 | MS.gene72840:CDS |
| AAGTGTTGAATTAACTGTAT+GGG | 0.508629 | 5.1:+17561906 | MS.gene72840:CDS |
| AAGCAAAAGAACTGCTATGT+TGG | 0.509267 | 5.1:-17562842 | None:intergenic |
| TAGCTGTAGGATTCACAGTC+GGG | 0.512335 | 5.1:-17561093 | None:intergenic |
| AATCCACCTGAACAGTCTGC+TGG | 0.512712 | 5.1:+17562948 | MS.gene72840:CDS |
| ATTTACAATTTCCGTCCCAT+TGG | 0.514076 | 5.1:+17561742 | MS.gene72840:CDS |
| AAATTAAAGATGAAAACTTA+GGG | 0.514330 | 5.1:+17562202 | MS.gene72840:CDS |
| TACCGAGTCGTTCTCTCCGA+TGG | 0.515942 | 5.1:+17559991 | MS.gene72840:CDS |
| CAACAGGGTATCTGGTGGAT+CGG | 0.516824 | 5.1:+17563082 | MS.gene72840:CDS |
| CAGGTGGATTTCTAAGATGT+AGG | 0.517112 | 5.1:-17562935 | None:intergenic |
| GGCTGTTGGTTCATAGGCTG+AGG | 0.522191 | 5.1:-17561313 | None:intergenic |
| AAGGTTATCGACAATGGGGA+TGG | 0.523176 | 5.1:+17562339 | MS.gene72840:CDS |
| TTTCTTATGATTGATGCTGT+AGG | 0.524916 | 5.1:-17561829 | None:intergenic |
| AATGCAACCAGCCTGGACAT+TGG | 0.525732 | 5.1:+17563129 | MS.gene72840:CDS |
| TGAATCCATATCAGAATATG+TGG | 0.525989 | 5.1:+17561410 | MS.gene72840:CDS |
| TATGGATTCAAAGCAGATAT+GGG | 0.529125 | 5.1:-17561397 | None:intergenic |
| ATGCAGATACAAGATCATAC+TGG | 0.532456 | 5.1:+17562426 | MS.gene72840:CDS |
| GGCTTGCCCAATGTCCAGGC+TGG | 0.533673 | 5.1:-17563136 | None:intergenic |
| GGTCTGTTCAAACTGACTCC+GGG | 0.534272 | 5.1:-17561193 | None:intergenic |
| CGCACCCTGAGTTAGATTCA+CGG | 0.535489 | 5.1:-17559857 | None:intergenic |
| TACTTCAACACGGTGTCTGG+TGG | 0.536288 | 5.1:+17562978 | MS.gene72840:CDS |
| TATATGTCATGCAGCAATTG+TGG | 0.536707 | 5.1:+17562885 | MS.gene72840:CDS |
| GGACCGGGGAGCCTTCCAAC+TGG | 0.537085 | 5.1:+17562774 | MS.gene72840:CDS |
| CTACCAGTTGGAAGGCTCCC+CGG | 0.538892 | 5.1:-17562777 | None:intergenic |
| TTACTGTTTCCATGAGATTG+AGG | 0.540190 | 5.1:-17563182 | None:intergenic |
| AGGGTATCTGGTGGATCGGG+TGG | 0.540283 | 5.1:+17563086 | MS.gene72840:CDS |
| CATTCTGGAAGGTTGCAGAA+AGG | 0.541521 | 5.1:+17560063 | MS.gene72840:CDS |
| TACCCCAATAGAGCGCCTAC+AGG | 0.542085 | 5.1:+17561346 | MS.gene72840:CDS |
| GTTTCCGCAATCCACAATAT+GGG | 0.543354 | 5.1:+17561254 | MS.gene72840:CDS |
| GGTCTTGAAGTCCCATATTG+TGG | 0.543559 | 5.1:-17561265 | None:intergenic |
| GTTGATAGCAGAGTTAATAG+TGG | 0.544022 | 5.1:-17562745 | None:intergenic |
| TATAGCAATGCCCGAGGTCA+GGG | 0.549414 | 5.1:+17561475 | MS.gene72840:CDS |
| AACTGTAGTGAAAGCAGAGA+AGG | 0.549497 | 5.1:+17562647 | MS.gene72840:CDS |
| CTGCACTCATATTAGGACAT+TGG | 0.549675 | 5.1:-17563157 | None:intergenic |
| AGTGCAGCACCTCAATCTCA+TGG | 0.551068 | 5.1:+17563173 | MS.gene72840:CDS |
| TGCTATAAATGCCAACAACC+TGG | 0.554286 | 5.1:+17563023 | MS.gene72840:CDS |
| TTCCTACCAAGGAGAAATAC+GGG | 0.554513 | 5.1:+17561525 | MS.gene72840:CDS |
| AGGGGATGGTTTGACCAGGA+AGG | 0.554514 | 5.1:+17562102 | MS.gene72840:CDS |
| AGGTTCTACCAATAATTGGC+TGG | 0.555216 | 5.1:-17562055 | None:intergenic |
| TAAAGTCTATCTGGTTTCCA+GGG | 0.556543 | 5.1:+17561600 | MS.gene72840:CDS |
| GTCCCATAATCTCTACCAGT+TGG | 0.558425 | 5.1:-17562789 | None:intergenic |
| TATGGCCGTGAATCTAACTC+AGG | 0.559607 | 5.1:+17559852 | None:intergenic |
| TATGCAAAACAACAGTATTG+TGG | 0.560142 | 5.1:+17561777 | MS.gene72840:CDS |
| ACGAGTTGGTTCATTCTGGA+AGG | 0.560850 | 5.1:+17560052 | MS.gene72840:CDS |
| CTAGCTGTAGGATTCACAGT+CGG | 0.562876 | 5.1:-17561094 | None:intergenic |
| AAAGCCAGAGTAACAGCTAA+GGG | 0.564905 | 5.1:+17561439 | MS.gene72840:CDS |
| GGGGATGGTTTGACCAGGAA+GGG | 0.571102 | 5.1:+17562103 | MS.gene72840:CDS |
| CTTGATTGGAAAACCTGACC+CGG | 0.571574 | 5.1:+17560904 | MS.gene72840:CDS |
| GAGGGCGGCGAGGACATCAT+GGG | 0.573351 | 5.1:+17562474 | MS.gene72840:CDS |
| GGAAACAGTAATACAGGGCA+AGG | 0.573609 | 5.1:+17563194 | MS.gene72840:CDS |
| GATATGGGAATTATCCTTGG+AGG | 0.575694 | 5.1:-17561382 | None:intergenic |
| TGTTGGTTCATAGGCTGAGG+AGG | 0.576019 | 5.1:-17561310 | None:intergenic |
| CTATTGGGGTACAAAGGAGA+TGG | 0.577113 | 5.1:-17561334 | None:intergenic |
| AGTGTTGAATTAACTGTATG+GGG | 0.577662 | 5.1:+17561907 | MS.gene72840:CDS |
| TAACAGCTAAGGGAGAACTT+AGG | 0.578549 | 5.1:+17561449 | MS.gene72840:CDS |
| GGAAATGTACAATCAGCTGC+TGG | 0.579256 | 5.1:+17560968 | MS.gene72840:CDS |
| GGTACAAAGGAGATGGCTGT+TGG | 0.579446 | 5.1:-17561327 | None:intergenic |
| TTCTATAATGAAATTGAAGT+CGG | 0.579692 | 5.1:+17561577 | MS.gene72840:CDS |
| AAATCGATAACTTGTAACAC+CGG | 0.580881 | 5.1:-17559928 | None:intergenic |
| CTGCATGACATATATGAACC+AGG | 0.580991 | 5.1:-17562876 | None:intergenic |
| CATAATCTCTACCAGTTGGA+AGG | 0.585428 | 5.1:-17562785 | None:intergenic |
| ACGGTGTCTGGTGGATCGGG+TGG | 0.586283 | 5.1:+17562987 | MS.gene72840:CDS |
| TTTCAATGTCACCAATGGGA+CGG | 0.588825 | 5.1:-17561753 | None:intergenic |
| CCACCTGAACAGTCTGCTGG+GGG | 0.589289 | 5.1:+17562951 | MS.gene72840:CDS |
| GAATAAACACTGCTAGCTGT+AGG | 0.590144 | 5.1:-17561106 | None:intergenic |
| CTGACTCACTTGATTTGCTG+GGG | 0.592519 | 5.1:-17562811 | None:intergenic |
| AAGTTGCCCGTATTTCTCCT+TGG | 0.593742 | 5.1:-17561531 | None:intergenic |
| CCTTATCCTAAACCTGAGCC+CGG | 0.593971 | 5.1:+17561175 | MS.gene72840:CDS |
| AGTTCTGGATCTGCAAGATA+CGG | 0.596623 | 5.1:+17561133 | MS.gene72840:CDS |
| GGCTCAGGTTTAGGATAAGG+TGG | 0.597704 | 5.1:-17561172 | None:intergenic |
| GATGGTTTGACCAGGAAGGG+AGG | 0.599066 | 5.1:+17562106 | MS.gene72840:CDS |
| CTTCAGTCTGAGAAAGCAGA+AGG | 0.600663 | 5.1:+17562720 | MS.gene72840:CDS |
| AAGTTATCATCCTCAACGCA+TGG | 0.600819 | 5.1:-17561706 | None:intergenic |
| AGGTTATCGACAATGGGGAT+GGG | 0.604110 | 5.1:+17562340 | MS.gene72840:CDS |
| AAGTCCCATATTGTGGATTG+CGG | 0.605059 | 5.1:-17561258 | None:intergenic |
| GGCAACTTGCTTTAATACCG+TGG | 0.605402 | 5.1:+17561546 | MS.gene72840:CDS |
| TGCCCGTATTTCTCCTTGGT+AGG | 0.606184 | 5.1:-17561527 | None:intergenic |
| TCCACCTGAACAGTCTGCTG+GGG | 0.606964 | 5.1:+17562950 | MS.gene72840:CDS |
| GAACTGAGAAAGCTTAACAA+TGG | 0.607205 | 5.1:-17560088 | None:intergenic |
| GGAGCATCATTTCTTCCTGT+AGG | 0.608224 | 5.1:-17561361 | None:intergenic |
| TCTCTGGAAATAGATTGACT+TGG | 0.608424 | 5.1:-17562135 | None:intergenic |
| CTCATGGAAACAGTAATACA+GGG | 0.609403 | 5.1:+17563189 | MS.gene72840:CDS |
| AAGATCATACTGGCATGACA+TGG | 0.610131 | 5.1:+17562436 | MS.gene72840:CDS |
| ACCAGACACCGTGTTGAAGT+AGG | 0.615126 | 5.1:-17562976 | None:intergenic |
| AGTTATACAGCCATGCGTTG+AGG | 0.618440 | 5.1:+17561696 | MS.gene72840:CDS |
| GGCGCTCTATTGGGGTACAA+AGG | 0.618965 | 5.1:-17561340 | None:intergenic |
| ATTATAGAACTGTTCAGCCA+CGG | 0.621977 | 5.1:-17561563 | None:intergenic |
| GAAGAAATGATGCTCCTCCA+AGG | 0.624446 | 5.1:+17561368 | MS.gene72840:CDS |
| AACAGTGGTTCCCATACAGG+TGG | 0.624885 | 5.1:+17561028 | MS.gene72840:CDS |
| TTATCTCTTGATCATTACGT+AGG | 0.629281 | 5.1:-17561657 | None:intergenic |
| CGCTACACAGAAGAACGAGT+TGG | 0.629408 | 5.1:+17560038 | MS.gene72840:CDS |
| CAGGTTTAGGATAAGGTGGA+GGG | 0.631269 | 5.1:-17561168 | None:intergenic |
| TTGTTGATAATACAAACCAT+CGG | 0.634104 | 5.1:-17560007 | None:intergenic |
| GTTGGTTCATAGGCTGAGGA+GGG | 0.635707 | 5.1:-17561309 | None:intergenic |
| CGATCCACCAGATACCCTGT+TGG | 0.638031 | 5.1:-17563081 | None:intergenic |
| TTCTACCAATAATTGGCTGG+TGG | 0.640568 | 5.1:-17562052 | None:intergenic |
| CACATCGGAAGAATTGCACC+CGG | 0.640884 | 5.1:+17559909 | MS.gene72840:CDS |
| ACAACCTGGTCATTGGGCGA+AGG | 0.644886 | 5.1:+17563037 | MS.gene72840:CDS |
| ATACAGTTAATTCAACACTT+CGG | 0.648500 | 5.1:-17561903 | None:intergenic |
| AACTCACAGTATTTGAACAG+TGG | 0.649462 | 5.1:+17561013 | MS.gene72840:CDS |
| TAGTATGAGTGCAGCCAACA+GGG | 0.649627 | 5.1:+17563067 | MS.gene72840:CDS |
| CACCTGAACAGTCTGCTGGG+GGG | 0.650603 | 5.1:+17562952 | MS.gene72840:CDS |
| GCAGCCAACAGGGTATCTGG+TGG | 0.651792 | 5.1:+17563077 | MS.gene72840:CDS |
| ACTGAGGGGATGGTTTGACC+AGG | 0.654074 | 5.1:+17562098 | MS.gene72840:CDS |
| AGATCATACTGGCATGACAT+GGG | 0.660545 | 5.1:+17562437 | MS.gene72840:CDS |
| ATGTCATGCAGCAATTGTGG+AGG | 0.663695 | 5.1:+17562888 | MS.gene72840:CDS |
| ATGGCCGTGAATCTAACTCA+GGG | 0.668154 | 5.1:+17559853 | MS.gene72840:CDS |
| GATGGTTTGTATTATCAACA+AGG | 0.668307 | 5.1:+17560009 | MS.gene72840:CDS |
| TAAGACCCATTCACTGACGC+TGG | 0.671160 | 5.1:-17561214 | None:intergenic |
| AATCGATAACTTGTAACACC+GGG | 0.673289 | 5.1:-17559927 | None:intergenic |
| AAAGTCTATCTGGTTTCCAG+GGG | 0.686944 | 5.1:+17561601 | MS.gene72840:CDS |
| CTATCAACACAACTGGACCG+GGG | 0.692708 | 5.1:+17562760 | MS.gene72840:CDS |
| TTTCACATCGGAAAACACAT+CGG | 0.693774 | 5.1:+17559894 | MS.gene72840:CDS |
| TATTGTGGATGTGATTGCCG+TGG | 0.695988 | 5.1:+17561792 | MS.gene72840:CDS |
| AGTAACGATGTGTTTCACAT+CGG | 0.703769 | 5.1:+17559882 | MS.gene72840:CDS |
| AGGTTTAGGATAAGGTGGAG+GGG | 0.708451 | 5.1:-17561167 | None:intergenic |
| GTGTTGAATTAACTGTATGG+GGG | 0.715516 | 5.1:+17561908 | MS.gene72840:CDS |
| TGACTCACAGCAGATTGTGA+AGG | 0.717395 | 5.1:-17560941 | None:intergenic |
| AGGACCTATAGCAATGCCCG+AGG | 0.735559 | 5.1:+17561469 | MS.gene72840:CDS |
| AACCATCGGAGAGAACGACT+CGG | 0.745203 | 5.1:-17559993 | None:intergenic |
| AGGACTGATAGAAGTAACCA+CGG | 0.746168 | 5.1:-17561809 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAGAATTTTTTTTTTTCT+GGG | + | chr5.1:17560710-17560729 | MS.gene72840:intron | 10.0% |
| !!! | TAAAAGAATTTTTTTTTTTC+TGG | + | chr5.1:17560709-17560728 | MS.gene72840:intron | 10.0% |
| !! | AAAACATAACAAAAAAACAT+CGG | - | chr5.1:17560601-17560620 | None:intergenic | 15.0% |
| !! | AAATCAAAAAACCAAATTAT+TGG | - | chr5.1:17560831-17560850 | None:intergenic | 15.0% |
| !! | AAATTAAAGATGAAAACTTA+GGG | + | chr5.1:17562202-17562221 | MS.gene72840:CDS | 15.0% |
| !!! | ATCTGAAATTAGATTTTTTT+AGG | + | chr5.1:17560220-17560239 | MS.gene72840:intron | 15.0% |
| !!! | TAAAAGAAGAAATTTTTCTA+GGG | + | chr5.1:17560336-17560355 | MS.gene72840:intron | 15.0% |
| !!! | TTAAAAGAAGAAATTTTTCT+AGG | + | chr5.1:17560335-17560354 | MS.gene72840:intron | 15.0% |
| !!! | TTGTTTTCTCAAATTATTAT+TGG | - | chr5.1:17560380-17560399 | None:intergenic | 15.0% |
| !!! | TTTTTGATTTTTACATGTAT+AGG | + | chr5.1:17560190-17560209 | MS.gene72840:intron | 15.0% |
| !! | AAACATAACAAAAAAACATC+GGG | - | chr5.1:17560600-17560619 | None:intergenic | 20.0% |
| !! | AAAGAAATCGAAAAAAAAAG+AGG | - | chr5.1:17560162-17560181 | None:intergenic | 20.0% |
| !! | AAGAAATCGAAAAAAAAAGA+GGG | - | chr5.1:17560161-17560180 | None:intergenic | 20.0% |
| !! | AATTATCATCATAGTTGATT+TGG | + | chr5.1:17560859-17560878 | MS.gene72840:CDS | 20.0% |
| !! | ATTTAAAGAAATCATCAGTA+AGG | + | chr5.1:17562551-17562570 | MS.gene72840:CDS | 20.0% |
| !! | CAAATTAAAGATGAAAACTT+AGG | + | chr5.1:17562201-17562220 | MS.gene72840:CDS | 20.0% |
| !! | TTATTATGTTTACAAAGACA+TGG | + | chr5.1:17560540-17560559 | MS.gene72840:intron | 20.0% |
| !! | TTCTATAATGAAATTGAAGT+CGG | + | chr5.1:17561577-17561596 | MS.gene72840:CDS | 20.0% |
| !!! | AAATTTTCAATTTTTGAAGC+CGG | + | chr5.1:17560306-17560325 | MS.gene72840:intron | 20.0% |
| !!! | AGTATTTTCTTTTGATCTTT+TGG | + | chr5.1:17561501-17561520 | MS.gene72840:CDS | 20.0% |
| !!! | ATTTTTACATGTATAGGAAA+TGG | + | chr5.1:17560196-17560215 | MS.gene72840:intron | 20.0% |
| !!! | TTTCTTCTTTTAATCAAATC+CGG | - | chr5.1:17560328-17560347 | None:intergenic | 20.0% |
| ! | AAAAAACCAAATTATTGGCA+CGG | - | chr5.1:17560826-17560845 | None:intergenic | 25.0% |
| ! | AGATAGACAATGTAACAAAA+AGG | + | chr5.1:17562320-17562339 | MS.gene72840:CDS | 25.0% |
| ! | ATACAGTTAATTCAACACTT+CGG | - | chr5.1:17561906-17561925 | None:intergenic | 25.0% |
| ! | GCATCAATCATAAGAAAAAA+TGG | + | chr5.1:17561835-17561854 | MS.gene72840:CDS | 25.0% |
| ! | TAAACAATTAAGCTACAACA+AGG | - | chr5.1:17560797-17560816 | None:intergenic | 25.0% |
| ! | TAAATGCTTTACTAACCAAT+AGG | + | chr5.1:17560758-17560777 | MS.gene72840:intron | 25.0% |
| !! | ATATTTTCAATGTCACCAAT+GGG | - | chr5.1:17561760-17561779 | None:intergenic | 25.0% |
| !! | GTTCAAGTTAAAAGTAAAAG+AGG | + | chr5.1:17562593-17562612 | MS.gene72840:CDS | 25.0% |
| !! | TGATTAAAATTCTTTTGAGC+TGG | - | chr5.1:17561637-17561656 | None:intergenic | 25.0% |
| !!! | AAGTGTTGAATTAACTGTAT+GGG | + | chr5.1:17561906-17561925 | MS.gene72840:CDS | 25.0% |
| !!! | AGTTGATTTGGATGTTATAA+TGG | + | chr5.1:17560871-17560890 | MS.gene72840:CDS | 25.0% |
| !!! | TTGTTGATAATACAAACCAT+CGG | - | chr5.1:17560010-17560029 | None:intergenic | 25.0% |
| AACAAAAAGGTTATCGACAA+TGG | + | chr5.1:17562333-17562352 | MS.gene72840:CDS | 30.0% | |
| AATCAGGTTCTACCAATAAT+TGG | - | chr5.1:17562062-17562081 | None:intergenic | 30.0% | |
| ACAAAAAGGTTATCGACAAT+GGG | + | chr5.1:17562334-17562353 | MS.gene72840:CDS | 30.0% | |
| AGTGTTTATTCTAACAGTTC+TGG | + | chr5.1:17561118-17561137 | MS.gene72840:CDS | 30.0% | |
| ATATGGATTCAAAGCAGATA+TGG | - | chr5.1:17561401-17561420 | None:intergenic | 30.0% | |
| ATTACTCAAAATCAGCAGTA+TGG | + | chr5.1:17563227-17563246 | MS.gene72840:CDS | 30.0% | |
| ATTGTCCACATATTCTGATA+TGG | - | chr5.1:17561418-17561437 | None:intergenic | 30.0% | |
| ATTTCAATGGGAAGTCTATT+GGG | + | chr5.1:17562022-17562041 | MS.gene72840:CDS | 30.0% | |
| CCAGAGTAAATGATTTCAAT+GGG | + | chr5.1:17562010-17562029 | MS.gene72840:CDS | 30.0% | |
| TATGCAAAACAACAGTATTG+TGG | + | chr5.1:17561777-17561796 | MS.gene72840:CDS | 30.0% | |
| TATGGATTCAAAGCAGATAT+GGG | - | chr5.1:17561400-17561419 | None:intergenic | 30.0% | |
| TGAATCCATATCAGAATATG+TGG | + | chr5.1:17561410-17561429 | MS.gene72840:CDS | 30.0% | |
| TTAGGTTAAGTATGTGTAGA+TGG | + | chr5.1:17560238-17560257 | MS.gene72840:intron | 30.0% | |
| TTATCTCTTGATCATTACGT+AGG | - | chr5.1:17561660-17561679 | None:intergenic | 30.0% | |
| TTGAAAATTTCACTGCTACA+AGG | - | chr5.1:17560296-17560315 | None:intergenic | 30.0% | |
| TTTCTTATGATTGATGCTGT+AGG | - | chr5.1:17561832-17561851 | None:intergenic | 30.0% | |
| ! | AAATCGATAACTTGTAACAC+CGG | - | chr5.1:17559931-17559950 | None:intergenic | 30.0% |
| ! | ACAGAATACAAATCTTTTGC+AGG | - | chr5.1:17562504-17562523 | None:intergenic | 30.0% |
| ! | AGTGTTGAATTAACTGTATG+GGG | + | chr5.1:17561907-17561926 | MS.gene72840:CDS | 30.0% |
| ! | CATATTTTCAATGTCACCAA+TGG | - | chr5.1:17561761-17561780 | None:intergenic | 30.0% |
| ! | GATGGTTTGTATTATCAACA+AGG | + | chr5.1:17560009-17560028 | MS.gene72840:CDS | 30.0% |
| ! | GCAGTTTTTACAACCAAAAT+TGG | - | chr5.1:17561991-17562010 | None:intergenic | 30.0% |
| ! | TAGTTGATGCTTGTGATTAT+AGG | + | chr5.1:17562391-17562410 | MS.gene72840:CDS | 30.0% |
| !! | GAAGTGTTGAATTAACTGTA+TGG | + | chr5.1:17561905-17561924 | MS.gene72840:CDS | 30.0% |
| AACATTAACACCACCTGTAT+GGG | - | chr5.1:17561041-17561060 | None:intergenic | 35.0% | |
| AACTCACAGTATTTGAACAG+TGG | + | chr5.1:17561013-17561032 | MS.gene72840:CDS | 35.0% | |
| AAGCAAAAGAACTGCTATGT+TGG | - | chr5.1:17562845-17562864 | None:intergenic | 35.0% | |
| ACCAAAACTAGATGATTCTC+TGG | - | chr5.1:17562154-17562173 | None:intergenic | 35.0% | |
| AGTAACGATGTGTTTCACAT+CGG | + | chr5.1:17559882-17559901 | MS.gene72840:CDS | 35.0% | |
| ATCTGACTCTAAATCTCTTC+TGG | + | chr5.1:17562683-17562702 | MS.gene72840:CDS | 35.0% | |
| ATGCAGATACAAGATCATAC+TGG | + | chr5.1:17562426-17562445 | MS.gene72840:CDS | 35.0% | |
| ATGCTTTACTAACCAATAGG+AGG | + | chr5.1:17560761-17560780 | MS.gene72840:intron | 35.0% | |
| ATGGACAAATGTGACTTGAT+TGG | + | chr5.1:17560890-17560909 | MS.gene72840:CDS | 35.0% | |
| ATGTGTAGATGGTGAATGAT+GGG | + | chr5.1:17560249-17560268 | MS.gene72840:intron | 35.0% | |
| ATTATAGAACTGTTCAGCCA+CGG | - | chr5.1:17561566-17561585 | None:intergenic | 35.0% | |
| ATTCCTACCAAGGAGAAATA+CGG | + | chr5.1:17561524-17561543 | MS.gene72840:CDS | 35.0% | |
| ATTTACAATTTCCGTCCCAT+TGG | + | chr5.1:17561742-17561761 | MS.gene72840:CDS | 35.0% | |
| CAAAAAGGTTATCGACAATG+GGG | + | chr5.1:17562335-17562354 | MS.gene72840:CDS | 35.0% | |
| CCCATTGAAATCATTTACTC+TGG | - | chr5.1:17562013-17562032 | None:intergenic | 35.0% | |
| CGGAAATTGTAAATCTGTTG+TGG | - | chr5.1:17561736-17561755 | None:intergenic | 35.0% | |
| CTCATGGAAACAGTAATACA+GGG | + | chr5.1:17563189-17563208 | MS.gene72840:CDS | 35.0% | |
| GAACTGAGAAAGCTTAACAA+TGG | - | chr5.1:17560091-17560110 | None:intergenic | 35.0% | |
| GATTTCAATGGGAAGTCTAT+TGG | + | chr5.1:17562021-17562040 | MS.gene72840:CDS | 35.0% | |
| GCACATATAGATATCCAATC+AGG | - | chr5.1:17562240-17562259 | None:intergenic | 35.0% | |
| GCCAGAGTAAATGATTTCAA+TGG | + | chr5.1:17562009-17562028 | MS.gene72840:CDS | 35.0% | |
| GTGTTGAATTAACTGTATGG+GGG | + | chr5.1:17561908-17561927 | MS.gene72840:CDS | 35.0% | |
| TAACATTAACACCACCTGTA+TGG | - | chr5.1:17561042-17561061 | None:intergenic | 35.0% | |
| TATATGTCATGCAGCAATTG+TGG | + | chr5.1:17562885-17562904 | MS.gene72840:CDS | 35.0% | |
| TATGTGTAGATGGTGAATGA+TGG | + | chr5.1:17560248-17560267 | MS.gene72840:intron | 35.0% | |
| TCTCATGGAAACAGTAATAC+AGG | + | chr5.1:17563188-17563207 | MS.gene72840:CDS | 35.0% | |
| TGCAAAATATTTGCGACTCT+GGG | + | chr5.1:17561959-17561978 | MS.gene72840:CDS | 35.0% | |
| TGTCTATCTCCTATCATGAT+AGG | - | chr5.1:17562309-17562328 | None:intergenic | 35.0% | |
| TTACTGTTTCCATGAGATTG+AGG | - | chr5.1:17563185-17563204 | None:intergenic | 35.0% | |
| TTCCAACTGGTAGAGATTAT+GGG | + | chr5.1:17562787-17562806 | MS.gene72840:CDS | 35.0% | |
| TTTCACATCGGAAAACACAT+CGG | + | chr5.1:17559894-17559913 | MS.gene72840:CDS | 35.0% | |
| ! | AAAATACTTTTCCCTGACCT+CGG | - | chr5.1:17561489-17561508 | None:intergenic | 35.0% |
| ! | AATCGATAACTTGTAACACC+GGG | - | chr5.1:17559930-17559949 | None:intergenic | 35.0% |
| ! | CGAACAAAAGAATTTTGCAC+TGG | - | chr5.1:17561289-17561308 | None:intergenic | 35.0% |
| ! | GTTGATTTCATTCACCTACA+TGG | + | chr5.1:17560435-17560454 | MS.gene72840:intron | 35.0% |
| ! | TAAAGTCTATCTGGTTTCCA+GGG | + | chr5.1:17561600-17561619 | MS.gene72840:CDS | 35.0% |
| ! | TCTCTGGAAATAGATTGACT+TGG | - | chr5.1:17562138-17562157 | None:intergenic | 35.0% |
| !! | ATGACTCTAGGAGGTTTTTA+TGG | + | chr5.1:17560644-17560663 | MS.gene72840:intron | 35.0% |
| !! | CTCTGGGAAATTTCCAATTT+TGG | + | chr5.1:17561975-17561994 | MS.gene72840:CDS | 35.0% |
| !! | GTTGATAGCAGAGTTAATAG+TGG | - | chr5.1:17562748-17562767 | None:intergenic | 35.0% |
| !! | GTTTTGGTAAAAGTGAAGTG+CGG | + | chr5.1:17562166-17562185 | MS.gene72840:CDS | 35.0% |
| !! | TCCAGAGAATCATCTAGTTT+TGG | + | chr5.1:17562150-17562169 | MS.gene72840:CDS | 35.0% |
| !! | TGACTCTAGGAGGTTTTTAT+GGG | + | chr5.1:17560645-17560664 | MS.gene72840:intron | 35.0% |
| AAACCAAATTATTGGCACGG+AGG | - | chr5.1:17560823-17560842 | None:intergenic | 40.0% | |
| AAAGCCAGAGTAACAGCTAA+GGG | + | chr5.1:17561439-17561458 | MS.gene72840:CDS | 40.0% | |
| AACTCTGCTATCAACACAAC+TGG | + | chr5.1:17562753-17562772 | MS.gene72840:CDS | 40.0% | |
| AACTGTAGTGAAAGCAGAGA+AGG | + | chr5.1:17562647-17562666 | MS.gene72840:CDS | 40.0% | |
| AAGATCATACTGGCATGACA+TGG | + | chr5.1:17562436-17562455 | MS.gene72840:CDS | 40.0% | |
| AAGTTATCATCCTCAACGCA+TGG | - | chr5.1:17561709-17561728 | None:intergenic | 40.0% | |
| AATACAGGGCAAGGAAGATA+TGG | + | chr5.1:17563203-17563222 | MS.gene72840:CDS | 40.0% | |
| ACAGCTTGTCCTATCATGAT+AGG | + | chr5.1:17562297-17562316 | MS.gene72840:CDS | 40.0% | |
| ACATGTGAACTGATGACTCT+AGG | + | chr5.1:17560632-17560651 | MS.gene72840:intron | 40.0% | |
| AGATCATACTGGCATGACAT+GGG | + | chr5.1:17562437-17562456 | MS.gene72840:CDS | 40.0% | |
| AGGACTGATAGAAGTAACCA+CGG | - | chr5.1:17561812-17561831 | None:intergenic | 40.0% | |
| AGGTTCTACCAATAATTGGC+TGG | - | chr5.1:17562058-17562077 | None:intergenic | 40.0% | |
| AGTTTCCGCAATCCACAATA+TGG | + | chr5.1:17561253-17561272 | MS.gene72840:CDS | 40.0% | |
| ATAGATGGCAGAGCTACATT+TGG | - | chr5.1:17561067-17561086 | None:intergenic | 40.0% | |
| CATAATCTCTACCAGTTGGA+AGG | - | chr5.1:17562788-17562807 | None:intergenic | 40.0% | |
| CTGCAAAATATTTGCGACTC+TGG | + | chr5.1:17561958-17561977 | MS.gene72840:CDS | 40.0% | |
| CTGCACTCATATTAGGACAT+TGG | - | chr5.1:17563160-17563179 | None:intergenic | 40.0% | |
| CTGCATGACATATATGAACC+AGG | - | chr5.1:17562879-17562898 | None:intergenic | 40.0% | |
| CTTCCAACTGGTAGAGATTA+TGG | + | chr5.1:17562786-17562805 | MS.gene72840:CDS | 40.0% | |
| GAATAAACACTGCTAGCTGT+AGG | - | chr5.1:17561109-17561128 | None:intergenic | 40.0% | |
| GATATGGGAATTATCCTTGG+AGG | - | chr5.1:17561385-17561404 | None:intergenic | 40.0% | |
| GCAAATCAAGTGAGTCAGTA+TGG | + | chr5.1:17562816-17562835 | MS.gene72840:CDS | 40.0% | |
| GCAGATATGGGAATTATCCT+TGG | - | chr5.1:17561388-17561407 | None:intergenic | 40.0% | |
| GGAGTAAAACTTCCTCCTAT+TGG | - | chr5.1:17560776-17560795 | None:intergenic | 40.0% | |
| GTTTCCGCAATCCACAATAT+GGG | + | chr5.1:17561254-17561273 | MS.gene72840:CDS | 40.0% | |
| TAAAGCCAGAGTAACAGCTA+AGG | + | chr5.1:17561438-17561457 | MS.gene72840:CDS | 40.0% | |
| TAACAGCTAAGGGAGAACTT+AGG | + | chr5.1:17561449-17561468 | MS.gene72840:CDS | 40.0% | |
| TGAAGTCGGTAAAGTCTATC+TGG | + | chr5.1:17561591-17561610 | MS.gene72840:CDS | 40.0% | |
| TGCTATAAATGCCAACAACC+TGG | + | chr5.1:17563023-17563042 | MS.gene72840:CDS | 40.0% | |
| TTCAGTGTTATCGCATGCAA+AGG | + | chr5.1:17560405-17560424 | MS.gene72840:intron | 40.0% | |
| TTCCTACCAAGGAGAAATAC+GGG | + | chr5.1:17561525-17561544 | MS.gene72840:CDS | 40.0% | |
| TTCTACCAATAATTGGCTGG+TGG | - | chr5.1:17562055-17562074 | None:intergenic | 40.0% | |
| TTTCAATGTCACCAATGGGA+CGG | - | chr5.1:17561756-17561775 | None:intergenic | 40.0% | |
| ! | AAAGTCTATCTGGTTTCCAG+GGG | + | chr5.1:17561601-17561620 | MS.gene72840:CDS | 40.0% |
| ! | AAATACTTTTCCCTGACCTC+GGG | - | chr5.1:17561488-17561507 | None:intergenic | 40.0% |
| ! | AAATGTAGCTCTGCCATCTA+TGG | + | chr5.1:17561066-17561085 | MS.gene72840:CDS | 40.0% |
| ! | AAGTCCCATATTGTGGATTG+CGG | - | chr5.1:17561261-17561280 | None:intergenic | 40.0% |
| ! | AGCAGTTCTTTTGCTTCATC+AGG | + | chr5.1:17562849-17562868 | MS.gene72840:CDS | 40.0% |
| ! | ATGGGGGAGTTTTTGCAATA+CGG | + | chr5.1:17561924-17561943 | MS.gene72840:CDS | 40.0% |
| ! | CTAGGAGGTTTTTATGGGAT+GGG | + | chr5.1:17560650-17560669 | MS.gene72840:intron | 40.0% |
| ! | GATCTTTTGGATTCCTACCA+AGG | + | chr5.1:17561514-17561533 | MS.gene72840:CDS | 40.0% |
| ! | GTAAAAGCCTCTGGAAAATC+AGG | - | chr5.1:17562078-17562097 | None:intergenic | 40.0% |
| ! | GTAAAGTCTATCTGGTTTCC+AGG | + | chr5.1:17561599-17561618 | MS.gene72840:CDS | 40.0% |
| ! | TCTAGGAGGTTTTTATGGGA+TGG | + | chr5.1:17560649-17560668 | MS.gene72840:intron | 40.0% |
| !! | AAGAACGAGTTGGTTCATTC+TGG | + | chr5.1:17560048-17560067 | MS.gene72840:CDS | 40.0% |
| !! | ACTGACTCACTTGATTTGCT+GGG | - | chr5.1:17562815-17562834 | None:intergenic | 40.0% |
| !! | AGTTCTGGATCTGCAAGATA+CGG | + | chr5.1:17561133-17561152 | MS.gene72840:CDS | 40.0% |
| !! | CAGGTGGATTTCTAAGATGT+AGG | - | chr5.1:17562938-17562957 | None:intergenic | 40.0% |
| !! | TACTGACTCACTTGATTTGC+TGG | - | chr5.1:17562816-17562835 | None:intergenic | 40.0% |
| !!! | GATTGTGAAGGTGCTTCTTT+TGG | - | chr5.1:17560932-17560951 | None:intergenic | 40.0% |
| AAGCCTTTCATGGGAAGTCT+CGG | + | chr5.1:17560483-17560502 | MS.gene72840:intron | 45.0% | |
| AAGGTTATCGACAATGGGGA+TGG | + | chr5.1:17562339-17562358 | MS.gene72840:CDS | 45.0% | |
| AAGTTGCCCGTATTTCTCCT+TGG | - | chr5.1:17561534-17561553 | None:intergenic | 45.0% | |
| AATACCGGACAAGCCTTTCA+TGG | + | chr5.1:17560473-17560492 | MS.gene72840:intron | 45.0% | |
| AATGCCAACAACCTGGTCAT+TGG | + | chr5.1:17563030-17563049 | MS.gene72840:CDS | 45.0% | |
| AGGTTATCGACAATGGGGAT+GGG | + | chr5.1:17562340-17562359 | MS.gene72840:CDS | 45.0% | |
| AGTGTTATCGCATGCAAAGG+TGG | + | chr5.1:17560408-17560427 | MS.gene72840:intron | 45.0% | |
| AGTTATACAGCCATGCGTTG+AGG | + | chr5.1:17561696-17561715 | MS.gene72840:CDS | 45.0% | |
| ATACCGGACAAGCCTTTCAT+GGG | + | chr5.1:17560474-17560493 | MS.gene72840:intron | 45.0% | |
| ATGCCAACAACCTGGTCATT+GGG | + | chr5.1:17563031-17563050 | MS.gene72840:CDS | 45.0% | |
| ATGGCCGTGAATCTAACTCA+GGG | + | chr5.1:17559853-17559872 | MS.gene72840:CDS | 45.0% | |
| ATGTCATGCAGCAATTGTGG+AGG | + | chr5.1:17562888-17562907 | MS.gene72840:CDS | 45.0% | |
| CAATAATTGGCTGGTGGCAA+TGG | - | chr5.1:17562049-17562068 | None:intergenic | 45.0% | |
| CAATCAGCTGCTGGTCAATT+AGG | + | chr5.1:17560977-17560996 | MS.gene72840:CDS | 45.0% | |
| CATTGCCACCAGCCAATTAT+TGG | + | chr5.1:17562047-17562066 | MS.gene72840:CDS | 45.0% | |
| CTAGCTGTAGGATTCACAGT+CGG | - | chr5.1:17561097-17561116 | None:intergenic | 45.0% | |
| CTATTGGGGTACAAAGGAGA+TGG | - | chr5.1:17561337-17561356 | None:intergenic | 45.0% | |
| CTCCAGTTGAAAGACATGTC+TGG | + | chr5.1:17561880-17561899 | MS.gene72840:CDS | 45.0% | |
| CTTCAGTCTGAGAAAGCAGA+AGG | + | chr5.1:17562720-17562739 | MS.gene72840:CDS | 45.0% | |
| CTTGATTGGAAAACCTGACC+CGG | + | chr5.1:17560904-17560923 | MS.gene72840:CDS | 45.0% | |
| GAAGAAATGATGCTCCTCCA+AGG | + | chr5.1:17561368-17561387 | MS.gene72840:CDS | 45.0% | |
| GGAAACAGTAATACAGGGCA+AGG | + | chr5.1:17563194-17563213 | MS.gene72840:CDS | 45.0% | |
| GGAAATGTACAATCAGCTGC+TGG | + | chr5.1:17560968-17560987 | MS.gene72840:CDS | 45.0% | |
| GGTCAATTAGGAAGCAATGC+TGG | + | chr5.1:17560989-17561008 | MS.gene72840:CDS | 45.0% | |
| GGTCTTGAAGTCCCATATTG+TGG | - | chr5.1:17561268-17561287 | None:intergenic | 45.0% | |
| GTCCCATAATCTCTACCAGT+TGG | - | chr5.1:17562792-17562811 | None:intergenic | 45.0% | |
| TAGCCTCCGTGCCAATAATT+TGG | + | chr5.1:17560817-17560836 | MS.gene72840:intron | 45.0% | |
| TAGCTGTAGGATTCACAGTC+GGG | - | chr5.1:17561096-17561115 | None:intergenic | 45.0% | |
| TAGTATGAGTGCAGCCAACA+GGG | + | chr5.1:17563067-17563086 | MS.gene72840:CDS | 45.0% | |
| TATTGTGGATGTGATTGCCG+TGG | + | chr5.1:17561792-17561811 | MS.gene72840:CDS | 45.0% | |
| TGACTCACAGCAGATTGTGA+AGG | - | chr5.1:17560944-17560963 | None:intergenic | 45.0% | |
| TGCTATAAATGCAACCAGCC+TGG | + | chr5.1:17563122-17563141 | MS.gene72840:CDS | 45.0% | |
| TGCTATCAACACAACTGGAC+CGG | + | chr5.1:17562758-17562777 | MS.gene72840:CDS | 45.0% | |
| TGTGAACTGATGACTCTAGG+AGG | + | chr5.1:17560635-17560654 | MS.gene72840:intron | 45.0% | |
| TTCACCTACATGGATGTGTC+CGG | + | chr5.1:17560445-17560464 | MS.gene72840:intron | 45.0% | |
| TTCTCCCTTAGCTGTTACTC+TGG | - | chr5.1:17561446-17561465 | None:intergenic | 45.0% | |
| TTGAACAGTGGTTCCCATAC+AGG | + | chr5.1:17561025-17561044 | MS.gene72840:CDS | 45.0% | |
| ! | AGGTTTAGGATAAGGTGGAG+GGG | - | chr5.1:17561170-17561189 | None:intergenic | 45.0% |
| ! | ATGTGTCCGGTGTTGAATAC+CGG | + | chr5.1:17560458-17560477 | MS.gene72840:intron | 45.0% |
| ! | CAGGTTTAGGATAAGGTGGA+GGG | - | chr5.1:17561171-17561190 | None:intergenic | 45.0% |
| ! | CATTCTGGAAGGTTGCAGAA+AGG | + | chr5.1:17560063-17560082 | MS.gene72840:CDS | 45.0% |
| ! | GGAGCATCATTTCTTCCTGT+AGG | - | chr5.1:17561364-17561383 | None:intergenic | 45.0% |
| ! | GGCAACTTGCTTTAATACCG+TGG | + | chr5.1:17561546-17561565 | MS.gene72840:CDS | 45.0% |
| ! | GGGAGTTTTTGCAATACGGA+AGG | + | chr5.1:17561928-17561947 | MS.gene72840:CDS | 45.0% |
| ! | GGTAGAACCTGATTTTCCAG+AGG | + | chr5.1:17562068-17562087 | MS.gene72840:CDS | 45.0% |
| ! | TCAGGTTTAGGATAAGGTGG+AGG | - | chr5.1:17561172-17561191 | None:intergenic | 45.0% |
| ! | TCCAGAGGCTTTTACACTGA+GGG | + | chr5.1:17562083-17562102 | MS.gene72840:CDS | 45.0% |
| ! | TGGTCTGTTCAAACTGACTC+CGG | - | chr5.1:17561197-17561216 | None:intergenic | 45.0% |
| ! | TTCCAGAGGCTTTTACACTG+AGG | + | chr5.1:17562082-17562101 | MS.gene72840:CDS | 45.0% |
| !! | ACGAGTTGGTTCATTCTGGA+AGG | + | chr5.1:17560052-17560071 | MS.gene72840:CDS | 45.0% |
| !! | ATGGGTTACTGCTTTTCAGG+AGG | + | chr5.1:17562455-17562474 | MS.gene72840:CDS | 45.0% |
| !! | CTGACTCACTTGATTTGCTG+GGG | - | chr5.1:17562814-17562833 | None:intergenic | 45.0% |
| !! | GACATGGGTTACTGCTTTTC+AGG | + | chr5.1:17562452-17562471 | MS.gene72840:CDS | 45.0% |
| !! | TGAGGTGCTGCACTCATATT+AGG | - | chr5.1:17563167-17563186 | None:intergenic | 45.0% |
| !! | TGGGTTACTGCTTTTCAGGA+GGG | + | chr5.1:17562456-17562475 | MS.gene72840:CDS | 45.0% |
| AACACCGGACACATCCATGT+AGG | - | chr5.1:17560452-17560471 | None:intergenic | 50.0% | |
| AACAGACCAGCGTCAGTGAA+TGG | + | chr5.1:17561208-17561227 | MS.gene72840:CDS | 50.0% | |
| AACAGTGGTTCCCATACAGG+TGG | + | chr5.1:17561028-17561047 | MS.gene72840:CDS | 50.0% | |
| AACCATCGGAGAGAACGACT+CGG | - | chr5.1:17559996-17560015 | None:intergenic | 50.0% | |
| AATCCACCTGAACAGTCTGC+TGG | + | chr5.1:17562948-17562967 | MS.gene72840:CDS | 50.0% | |
| AATGCAACCAGCCTGGACAT+TGG | + | chr5.1:17563129-17563148 | MS.gene72840:CDS | 50.0% | |
| ACAGACCAGCGTCAGTGAAT+GGG | + | chr5.1:17561209-17561228 | MS.gene72840:CDS | 50.0% | |
| ACCAGACACCGTGTTGAAGT+AGG | - | chr5.1:17562979-17562998 | None:intergenic | 50.0% | |
| AGTGCAGCACCTCAATCTCA+TGG | + | chr5.1:17563173-17563192 | MS.gene72840:CDS | 50.0% | |
| ATCCACCTGAACAGTCTGCT+GGG | + | chr5.1:17562949-17562968 | MS.gene72840:CDS | 50.0% | |
| ATGCAACCAGCCTGGACATT+GGG | + | chr5.1:17563130-17563149 | MS.gene72840:CDS | 50.0% | |
| CAATCTGCTGTGAGTCATGC+AGG | + | chr5.1:17560947-17560966 | MS.gene72840:CDS | 50.0% | |
| CACATCGGAAGAATTGCACC+CGG | + | chr5.1:17559909-17559928 | MS.gene72840:CDS | 50.0% | |
| CCTTATCCTAAACCTGAGCC+CGG | + | chr5.1:17561175-17561194 | MS.gene72840:CDS | 50.0% | |
| CGCACCCTGAGTTAGATTCA+CGG | - | chr5.1:17559860-17559879 | None:intergenic | 50.0% | |
| CGCTACACAGAAGAACGAGT+TGG | + | chr5.1:17560038-17560057 | MS.gene72840:CDS | 50.0% | |
| CTAGTATGAGTGCAGCCAAC+AGG | + | chr5.1:17563066-17563085 | MS.gene72840:CDS | 50.0% | |
| CTATCAACACAACTGGACCG+GGG | + | chr5.1:17562760-17562779 | MS.gene72840:CDS | 50.0% | |
| CTTCCCATGAAAGGCTTGTC+CGG | - | chr5.1:17560480-17560499 | None:intergenic | 50.0% | |
| CTTCCTGTAGGCGCTCTATT+GGG | - | chr5.1:17561352-17561371 | None:intergenic | 50.0% | |
| GCTATCAACACAACTGGACC+GGG | + | chr5.1:17562759-17562778 | MS.gene72840:CDS | 50.0% | |
| GCTTGTCCGGTATTCAACAC+CGG | - | chr5.1:17560467-17560486 | None:intergenic | 50.0% | |
| GGACTTCAGACAAGCCTGAT+TGG | + | chr5.1:17562223-17562242 | MS.gene72840:CDS | 50.0% | |
| GGCCAGACATGTCTTTCAAC+TGG | - | chr5.1:17561885-17561904 | None:intergenic | 50.0% | |
| GGTACAAAGGAGATGGCTGT+TGG | - | chr5.1:17561330-17561349 | None:intergenic | 50.0% | |
| TAAGACCCATTCACTGACGC+TGG | - | chr5.1:17561217-17561236 | None:intergenic | 50.0% | |
| TACTTCAACACGGTGTCTGG+TGG | + | chr5.1:17562978-17562997 | MS.gene72840:CDS | 50.0% | |
| TATAGCAATGCCCGAGGTCA+GGG | + | chr5.1:17561475-17561494 | MS.gene72840:CDS | 50.0% | |
| TCGACAATGGGGATGGGAAA+TGG | + | chr5.1:17562346-17562365 | MS.gene72840:CDS | 50.0% | |
| TCTTCCTGTAGGCGCTCTAT+TGG | - | chr5.1:17561353-17561372 | None:intergenic | 50.0% | |
| TGCCCGTATTTCTCCTTGGT+AGG | - | chr5.1:17561530-17561549 | None:intergenic | 50.0% | |
| TTCCTGTAGGCGCTCTATTG+GGG | - | chr5.1:17561351-17561370 | None:intergenic | 50.0% | |
| TTGGAACATTCCTCCCTTCC+TGG | - | chr5.1:17562119-17562138 | None:intergenic | 50.0% | |
| TTTGCTTCATCAGGTGCTCC+TGG | + | chr5.1:17562858-17562877 | MS.gene72840:CDS | 50.0% | |
| ! | AACAGGGTATCTGGTGGATC+GGG | + | chr5.1:17563083-17563102 | MS.gene72840:CDS | 50.0% |
| ! | AGGCTTTTACACTGAGGGGA+TGG | + | chr5.1:17562088-17562107 | MS.gene72840:CDS | 50.0% |
| ! | CAACAGGGTATCTGGTGGAT+CGG | + | chr5.1:17563082-17563101 | MS.gene72840:CDS | 50.0% |
| ! | CCAGAGGCTTTTACACTGAG+GGG | + | chr5.1:17562084-17562103 | MS.gene72840:CDS | 50.0% |
| ! | CTGTTGGCTGCACTCATACT+AGG | - | chr5.1:17563068-17563087 | None:intergenic | 50.0% |
| ! | GGCTCAGGTTTAGGATAAGG+TGG | - | chr5.1:17561175-17561194 | None:intergenic | 50.0% |
| ! | GGTCTGTTCAAACTGACTCC+GGG | - | chr5.1:17561196-17561215 | None:intergenic | 50.0% |
| ! | GTTGGTTCATAGGCTGAGGA+GGG | - | chr5.1:17561312-17561331 | None:intergenic | 50.0% |
| !! | GGAGATGGCTGTTGGTTCAT+AGG | - | chr5.1:17561322-17561341 | None:intergenic | 50.0% |
| !! | GTTACTGCTTTTCAGGAGGG+CGG | + | chr5.1:17562459-17562478 | MS.gene72840:CDS | 50.0% |
| !! | TGTTGGTTCATAGGCTGAGG+AGG | - | chr5.1:17561313-17561332 | None:intergenic | 50.0% |
| !!! | AAGGTGCTTCTTTTGGTGCC+GGG | - | chr5.1:17560925-17560944 | None:intergenic | 50.0% |
| !!! | GAAGGTGCTTCTTTTGGTGC+CGG | - | chr5.1:17560926-17560945 | None:intergenic | 50.0% |
| ACAACCTGGTCATTGGGCGA+AGG | + | chr5.1:17563037-17563056 | MS.gene72840:CDS | 55.0% | |
| ACAGTCGGGCGATCCATAGA+TGG | - | chr5.1:17561082-17561101 | None:intergenic | 55.0% | |
| ACTGAGGGGATGGTTTGACC+AGG | + | chr5.1:17562098-17562117 | MS.gene72840:CDS | 55.0% | |
| AGGACCTATAGCAATGCCCG+AGG | + | chr5.1:17561469-17561488 | MS.gene72840:CDS | 55.0% | |
| AGGGGATGGTTTGACCAGGA+AGG | + | chr5.1:17562102-17562121 | MS.gene72840:CDS | 55.0% | |
| ATGGGAAATGGCGCTGTGAC+AGG | + | chr5.1:17562358-17562377 | MS.gene72840:CDS | 55.0% | |
| CCCCTCAGTGTAAAAGCCTC+TGG | - | chr5.1:17562087-17562106 | None:intergenic | 55.0% | |
| CGATCCACCAGATACCCTGT+TGG | - | chr5.1:17563084-17563103 | None:intergenic | 55.0% | |
| CTATAGCAATGCCCGAGGTC+AGG | + | chr5.1:17561474-17561493 | MS.gene72840:CDS | 55.0% | |
| GATGGTTTGACCAGGAAGGG+AGG | + | chr5.1:17562106-17562125 | MS.gene72840:CDS | 55.0% | |
| GCACCGAGACTTCCCATGAA+AGG | - | chr5.1:17560489-17560508 | None:intergenic | 55.0% | |
| GCCTACTTCAACACGGTGTC+TGG | + | chr5.1:17562975-17562994 | MS.gene72840:CDS | 55.0% | |
| GGCGCTCTATTGGGGTACAA+AGG | - | chr5.1:17561343-17561362 | None:intergenic | 55.0% | |
| GGGGATGGTTTGACCAGGAA+GGG | + | chr5.1:17562103-17562122 | MS.gene72840:CDS | 55.0% | |
| TACCGAGTCGTTCTCTCCGA+TGG | + | chr5.1:17559991-17560010 | MS.gene72840:CDS | 55.0% | |
| TCCACCTGAACAGTCTGCTG+GGG | + | chr5.1:17562950-17562969 | MS.gene72840:CDS | 55.0% | |
| TCGCCCAATGACCAGGTTGT+TGG | - | chr5.1:17563037-17563056 | None:intergenic | 55.0% | |
| ! | AACACGGTGTCTGGTGGATC+GGG | + | chr5.1:17562984-17563003 | MS.gene72840:CDS | 55.0% |
| ! | AGTGCAGCCAACAGGGTATC+TGG | + | chr5.1:17563074-17563093 | MS.gene72840:CDS | 55.0% |
| ! | CAACACGGTGTCTGGTGGAT+CGG | + | chr5.1:17562983-17563002 | MS.gene72840:CDS | 55.0% |
| ! | CCGGGCTCAGGTTTAGGATA+AGG | - | chr5.1:17561178-17561197 | None:intergenic | 55.0% |
| ! | CTGACCTCGGGCATTGCTAT+AGG | - | chr5.1:17561476-17561495 | None:intergenic | 55.0% |
| ! | TACCCCAATAGAGCGCCTAC+AGG | + | chr5.1:17561346-17561365 | MS.gene72840:CDS | 55.0% |
| ! | TTCAAACTGACTCCGGGCTC+AGG | - | chr5.1:17561190-17561209 | None:intergenic | 55.0% |
| !! | CATTGGCTTGCCCAATGTCC+AGG | - | chr5.1:17563143-17563162 | None:intergenic | 55.0% |
| !! | GGCTGTTGGTTCATAGGCTG+AGG | - | chr5.1:17561316-17561335 | None:intergenic | 55.0% |
| ACCTGAACAGTCTGCTGGGG+GGG | + | chr5.1:17562953-17562972 | MS.gene72840:CDS | 60.0% | |
| CACCTGAACAGTCTGCTGGG+GGG | + | chr5.1:17562952-17562971 | MS.gene72840:CDS | 60.0% | |
| CAGTCCTTCGCCCAATGACC+AGG | - | chr5.1:17563044-17563063 | None:intergenic | 60.0% | |
| CCACCTGAACAGTCTGCTGG+GGG | + | chr5.1:17562951-17562970 | MS.gene72840:CDS | 60.0% | |
| CTACCAGTTGGAAGGCTCCC+CGG | - | chr5.1:17562780-17562799 | None:intergenic | 60.0% | |
| CTGACTCCGGGCTCAGGTTT+AGG | - | chr5.1:17561184-17561203 | None:intergenic | 60.0% | |
| TGGGGGGGCCTACTTCAACA+CGG | + | chr5.1:17562968-17562987 | MS.gene72840:CDS | 60.0% | |
| ! | AGCTGGCTTCAGACTTCCCC+TGG | - | chr5.1:17561620-17561639 | None:intergenic | 60.0% |
| ! | AGGGTATCTGGTGGATCGGG+TGG | + | chr5.1:17563086-17563105 | MS.gene72840:CDS | 60.0% |
| ! | GCAGCCAACAGGGTATCTGG+TGG | + | chr5.1:17563077-17563096 | MS.gene72840:CDS | 60.0% |
| !!! | GCTTCTTTTGGTGCCGGGTC+AGG | - | chr5.1:17560920-17560939 | None:intergenic | 60.0% |
| CCCCCAGCAGACTGTTCAGG+TGG | - | chr5.1:17562954-17562973 | None:intergenic | 65.0% | |
| GAGGGCGGCGAGGACATCAT+GGG | + | chr5.1:17562474-17562493 | MS.gene72840:CDS | 65.0% | |
| GGCTTGCCCAATGTCCAGGC+TGG | - | chr5.1:17563139-17563158 | None:intergenic | 65.0% | |
| GGTGGATCGGGTGGTGCTTC+AGG | + | chr5.1:17562996-17563015 | MS.gene72840:CDS | 65.0% | |
| ! | ACGGTGTCTGGTGGATCGGG+TGG | + | chr5.1:17562987-17563006 | MS.gene72840:CDS | 65.0% |
| !! | TGCTTTTCAGGAGGGCGGCG+AGG | + | chr5.1:17562464-17562483 | MS.gene72840:CDS | 65.0% |
| GCCCCCCCAGCAGACTGTTC+AGG | - | chr5.1:17562957-17562976 | None:intergenic | 70.0% | |
| GGACCGGGGAGCCTTCCAAC+TGG | + | chr5.1:17562774-17562793 | MS.gene72840:CDS | 70.0% | |
| GGAGGGCGGCGAGGACATCA+TGG | + | chr5.1:17562473-17562492 | MS.gene72840:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 17559853 | 17563259 | 17559853 | ID=MS.gene72840 |
| chr5.1 | mRNA | 17559853 | 17563259 | 17559853 | ID=MS.gene72840.t1;Parent=MS.gene72840 |
| chr5.1 | exon | 17559853 | 17560136 | 17559853 | ID=MS.gene72840.t1.exon1;Parent=MS.gene72840.t1 |
| chr5.1 | CDS | 17559853 | 17560136 | 17559853 | ID=cds.MS.gene72840.t1;Parent=MS.gene72840.t1 |
| chr5.1 | exon | 17560859 | 17563259 | 17560859 | ID=MS.gene72840.t1.exon2;Parent=MS.gene72840.t1 |
| chr5.1 | CDS | 17560859 | 17563259 | 17560859 | ID=cds.MS.gene72840.t1;Parent=MS.gene72840.t1 |
| Gene Sequence |
| Protein sequence |
