Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72866.t1 | XP_003612657.1 | 98.2 | 550 | 6 | 1 | 1 | 550 | 1 | 546 | 2.00E-288 | 1001.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72866.t1 | G7K875 | 98.2 | 550 | 6 | 1 | 1 | 550 | 1 | 546 | 1.4e-288 | 1001.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050297 | MS.gene72866 | 0.810133 | 1.34E-50 | -1.69E-46 |
| MS.gene050338 | MS.gene72866 | 0.843051 | 1.78E-58 | -1.69E-46 |
| MS.gene050904 | MS.gene72866 | -0.802674 | 5.02E-49 | -1.69E-46 |
| MS.gene052143 | MS.gene72866 | 0.838348 | 3.03E-57 | -1.69E-46 |
| MS.gene052494 | MS.gene72866 | 0.803825 | 2.90E-49 | -1.69E-46 |
| MS.gene054344 | MS.gene72866 | -0.805182 | 1.51E-49 | -1.69E-46 |
| MS.gene054614 | MS.gene72866 | 0.800898 | 1.16E-48 | -1.69E-46 |
| MS.gene05470 | MS.gene72866 | -0.818927 | 1.52E-52 | -1.69E-46 |
| MS.gene054999 | MS.gene72866 | 0.833375 | 5.53E-56 | -1.69E-46 |
| MS.gene055251 | MS.gene72866 | 0.854964 | 8.66E-62 | -1.69E-46 |
| MS.gene055729 | MS.gene72866 | 0.826464 | 2.67E-54 | -1.69E-46 |
| MS.gene055730 | MS.gene72866 | 0.818744 | 1.67E-52 | -1.69E-46 |
| MS.gene055731 | MS.gene72866 | 0.829115 | 6.17E-55 | -1.69E-46 |
| MS.gene055748 | MS.gene72866 | -0.812732 | 3.66E-51 | -1.69E-46 |
| MS.gene055751 | MS.gene72866 | -0.814482 | 1.51E-51 | -1.69E-46 |
| MS.gene05589 | MS.gene72866 | -0.82847 | 8.83E-55 | -1.69E-46 |
| MS.gene056266 | MS.gene72866 | -0.862275 | 5.69E-64 | -1.69E-46 |
| MS.gene058334 | MS.gene72866 | 0.804121 | 2.51E-49 | -1.69E-46 |
| MS.gene05960 | MS.gene72866 | 0.807013 | 6.22E-50 | -1.69E-46 |
| MS.gene061044 | MS.gene72866 | 0.843064 | 1.76E-58 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72866.t1 | MTR_5g027460 | 98.182 | 550 | 6 | 1 | 1 | 550 | 1 | 546 | 0.0 | 1087 |
| MS.gene72866.t1 | MTR_8g071050 | 58.627 | 510 | 184 | 8 | 48 | 550 | 15 | 504 | 0.0 | 584 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 123 sgRNAs with CRISPR-Local
Find 293 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAAGCTCTCCGGTGGTTTC+TGG | 0.135799 | 5.1:+17964950 | MS.gene72866:CDS |
| GGAATTGTTGTGTTGCTATT+TGG | 0.217379 | 5.1:+17964869 | MS.gene72866:CDS |
| CCTTCTAGATTTGAAACTTT+TGG | 0.246591 | 5.1:+17960869 | MS.gene72866:CDS |
| TGCTGAAAACTTTGAACTTA+TGG | 0.252202 | 5.1:-17963772 | None:intergenic |
| GCCATAGCTGCACCAATTCT+TGG | 0.258567 | 5.1:+17963831 | MS.gene72866:CDS |
| AGAGCGATATTATGAGTCTT+TGG | 0.272001 | 5.1:+17964204 | MS.gene72866:CDS |
| TCGCTTCTGTCTTCAGGGTT+TGG | 0.279277 | 5.1:+17964587 | MS.gene72866:CDS |
| TTCAAATATCCTCATGCTAT+TGG | 0.284045 | 5.1:+17964344 | MS.gene72866:CDS |
| GGATATTTGAAGATGGAAAA+AGG | 0.290219 | 5.1:-17964332 | None:intergenic |
| GCTACCGCTGCTGGTTGTTT+TGG | 0.298634 | 5.1:+17964125 | MS.gene72866:CDS |
| GCTGCAACTGTGATGAGTTT+TGG | 0.299283 | 5.1:-17963885 | None:intergenic |
| GTGGATTAATTTGGCTTGTT+GGG | 0.311746 | 5.1:+17964243 | MS.gene72866:CDS |
| AAGAAGGTGCTTTCTCTATA+TGG | 0.325715 | 5.1:+17964738 | MS.gene72866:CDS |
| GCTGGTGGTGCTGTTGCTGC+AGG | 0.337983 | 5.1:+17964905 | MS.gene72866:CDS |
| CCAAAAGTTTCAAATCTAGA+AGG | 0.341466 | 5.1:-17960869 | None:intergenic |
| TGCTTTCTTGAGAGTTGTTC+CGG | 0.346386 | 5.1:-17964057 | None:intergenic |
| ACGGACACAGTCACTGGAAA+TGG | 0.347797 | 5.1:+17964618 | MS.gene72866:CDS |
| CATCGAGTTCGTGTATCATA+TGG | 0.363899 | 5.1:-17964175 | None:intergenic |
| GCCATTCAGAGCACATCAAC+AGG | 0.364880 | 5.1:+17964662 | MS.gene72866:CDS |
| ATCTTCATTCCCTACATTGC+CGG | 0.366801 | 5.1:+17963963 | MS.gene72866:CDS |
| CAGTTGGGCCAGGACGGATT+AGG | 0.378121 | 5.1:+17964810 | MS.gene72866:CDS |
| TCAGGGTTTGGATTCTATTA+CGG | 0.378827 | 5.1:+17964599 | MS.gene72866:CDS |
| TCAACGGTTACCTCTTTCAT+TGG | 0.381125 | 5.1:-17960653 | None:intergenic |
| GAGCGATATTATGAGTCTTT+GGG | 0.383579 | 5.1:+17964205 | MS.gene72866:CDS |
| AGTGGATTAATTTGGCTTGT+TGG | 0.385611 | 5.1:+17964242 | MS.gene72866:CDS |
| ACATCAATTGCTTGGGCTAC+AGG | 0.393116 | 5.1:+17963804 | MS.gene72866:CDS |
| TTGTTGGACAGCTTTGCATT+AGG | 0.398635 | 5.1:+17964435 | MS.gene72866:CDS |
| TCCTTTCCTTCCACCTCGAC+GGG | 0.401554 | 5.1:+17963856 | MS.gene72866:CDS |
| GAGCTGCAGGTTTGTGTGTC+GGG | 0.405501 | 5.1:+17964774 | MS.gene72866:CDS |
| AACGAGTGGGAAAAGGAAAT+AGG | 0.408665 | 5.1:-17964486 | None:intergenic |
| TCGCTTCATGCTACCGCTGC+TGG | 0.410431 | 5.1:+17964116 | MS.gene72866:CDS |
| CGGACACAGTCACTGGAAAT+GGG | 0.411485 | 5.1:+17964619 | MS.gene72866:CDS |
| CTTTCTCTATATGGTATGCT+TGG | 0.415039 | 5.1:+17964747 | MS.gene72866:CDS |
| GGGTTCACAGTTGGTTCAGT+TGG | 0.419215 | 5.1:+17964794 | MS.gene72866:CDS |
| CTCATCACAGTTGCAGCAAC+AGG | 0.423526 | 5.1:+17963891 | MS.gene72866:CDS |
| CTTGAGAGTTGTTCCGGTGA+AGG | 0.430405 | 5.1:-17964051 | None:intergenic |
| TCAGCTCTGTTGTGTAAGTC+AGG | 0.431402 | 5.1:-17960791 | None:intergenic |
| AGAGCTAGAGAAGCTTATAA+TGG | 0.439562 | 5.1:+17960824 | MS.gene72866:CDS |
| CTACTGTTTCACTTCAAGAA+TGG | 0.440649 | 5.1:+17960984 | MS.gene72866:CDS |
| TGGAATGGACATCAATTGCT+TGG | 0.448789 | 5.1:+17963796 | MS.gene72866:CDS |
| TTCCTTTCCTTCCACCTCGA+CGG | 0.451958 | 5.1:+17963855 | MS.gene72866:CDS |
| CTCATGATCCGCGCCTTCAC+CGG | 0.455419 | 5.1:+17964038 | MS.gene72866:CDS |
| GGTGTTAGATTGTGCTCCAT+CGG | 0.459276 | 5.1:+17964712 | MS.gene72866:CDS |
| CGGTGAAGATGCAGATCGTT+GGG | 0.462336 | 5.1:+17964555 | MS.gene72866:CDS |
| GGTTCACAGTTGGTTCAGTT+GGG | 0.464283 | 5.1:+17964795 | MS.gene72866:CDS |
| GTGTTAGATTGTGCTCCATC+GGG | 0.470775 | 5.1:+17964713 | MS.gene72866:CDS |
| TTTCTTCATCCCAATGAAAG+AGG | 0.476943 | 5.1:+17960643 | None:intergenic |
| AAGGAAAGGAAGCCAAGAAT+TGG | 0.479551 | 5.1:-17963843 | None:intergenic |
| TATAATGGTTATGAAGAAGT+TGG | 0.482116 | 5.1:+17960839 | MS.gene72866:CDS |
| TGGCACTCACTGCTCTCAAA+AGG | 0.482913 | 5.1:+17961021 | MS.gene72866:CDS |
| GGAATGGACATCAATTGCTT+GGG | 0.484450 | 5.1:+17963797 | MS.gene72866:CDS |
| ATCTTAACCACGCGCAGTAA+AGG | 0.487567 | 5.1:-17964527 | None:intergenic |
| ATAATGAGAGGAAAGACAAC+AGG | 0.494062 | 5.1:-17960941 | None:intergenic |
| TGCTATGATGCCGGCAATGT+AGG | 0.494836 | 5.1:-17963973 | None:intergenic |
| TCTATTACGGACACAGTCAC+TGG | 0.495368 | 5.1:+17964612 | MS.gene72866:CDS |
| GCCAAGAATTGGTGCAGCTA+TGG | 0.496623 | 5.1:-17963832 | None:intergenic |
| GCTATGATGCCGGCAATGTA+GGG | 0.500968 | 5.1:-17963972 | None:intergenic |
| CTGGTGGTGCTGTTGCTGCA+GGG | 0.503512 | 5.1:+17964906 | MS.gene72866:CDS |
| TGCTGCATTAGCAACTGTGC+TGG | 0.512568 | 5.1:-17963997 | None:intergenic |
| ACAATGAAACGAGTGGGAAA+AGG | 0.514084 | 5.1:-17964493 | None:intergenic |
| ACAGTTGGTTCAGTTGGGCC+AGG | 0.514316 | 5.1:+17964800 | MS.gene72866:CDS |
| GACACCACCTTCAGCTTCAA+CGG | 0.516913 | 5.1:-17960669 | None:intergenic |
| CCCTGTTGATGTGCTCTGAA+TGG | 0.519342 | 5.1:-17964663 | None:intergenic |
| TGTGCTCCATCGGGAAAAGA+AGG | 0.520552 | 5.1:+17964722 | MS.gene72866:CDS |
| TCACTGGAAATGGGGACACT+TGG | 0.526145 | 5.1:+17964628 | MS.gene72866:CDS |
| GGACGGATTAGGACTTCGTT+CGG | 0.527260 | 5.1:+17964821 | MS.gene72866:CDS |
| TTGTGTGTCGGGTTCACAGT+TGG | 0.527867 | 5.1:+17964785 | MS.gene72866:CDS |
| AGAGCTGCAGGTTTGTGTGT+CGG | 0.529302 | 5.1:+17964773 | MS.gene72866:CDS |
| GAAGCTGAAGGTGGTGTCCT+TGG | 0.531829 | 5.1:+17960674 | MS.gene72866:CDS |
| TCGGTGAAGATGCAGATCGT+TGG | 0.534098 | 5.1:+17964554 | MS.gene72866:CDS |
| AAATATCCTCATGCTATTGG+AGG | 0.534903 | 5.1:+17964347 | MS.gene72866:CDS |
| GGTAGCATGAAGCGAGAGAC+GGG | 0.538468 | 5.1:-17964108 | None:intergenic |
| TCCCGTCGAGGTGGAAGGAA+AGG | 0.538718 | 5.1:-17963857 | None:intergenic |
| GAAGGTGGTGTCCTTGGCCA+TGG | 0.540959 | 5.1:+17960680 | MS.gene72866:CDS |
| GCTGGATTCTTCAAAGTCAC+AGG | 0.541392 | 5.1:+17963939 | MS.gene72866:CDS |
| CGGTGAAGGCGCGGATCATG+AGG | 0.544790 | 5.1:-17964037 | None:intergenic |
| CCTTGCATCATTCACAACAA+TGG | 0.547908 | 5.1:+17964385 | MS.gene72866:CDS |
| CTTGGCCATGGACATGGACA+TGG | 0.548231 | 5.1:+17960692 | MS.gene72866:CDS |
| CATGTCCATGTCCATGGCCA+AGG | 0.551684 | 5.1:-17960691 | None:intergenic |
| CATGGTCATGGTCATGGTCA+AGG | 0.553809 | 5.1:+17960716 | MS.gene72866:CDS |
| AACGAAGTCCTAATCCGTCC+TGG | 0.555456 | 5.1:-17964818 | None:intergenic |
| TTTGGAAACATCAGTGATGC+TGG | 0.565468 | 5.1:+17964887 | MS.gene72866:CDS |
| GGTGTCCTTGGCCATGGACA+TGG | 0.565826 | 5.1:+17960686 | MS.gene72866:CDS |
| GTGACTTTGAAGAATCCAGC+CGG | 0.572168 | 5.1:-17963936 | None:intergenic |
| GAATGGAACAAAACTCATCC+TGG | 0.572504 | 5.1:+17961001 | MS.gene72866:CDS |
| CGATAACGAGAGAAGCTCTC+CGG | 0.572999 | 5.1:+17964940 | MS.gene72866:CDS |
| GCAGCTTCAGAAGTTGCTAA+AGG | 0.575778 | 5.1:+17960746 | MS.gene72866:CDS |
| AGCATGAGGATATTTGAAGA+TGG | 0.576279 | 5.1:-17964339 | None:intergenic |
| CGGTAGCATGAAGCGAGAGA+CGG | 0.579495 | 5.1:-17964109 | None:intergenic |
| GAAATTCCCGTCGAGGTGGA+AGG | 0.585421 | 5.1:-17963862 | None:intergenic |
| GCTACAACCTTTACTGCGCG+TGG | 0.586433 | 5.1:+17964520 | MS.gene72866:CDS |
| TGTGCTGGCTGCTATGATGC+CGG | 0.588369 | 5.1:-17963982 | None:intergenic |
| TATGCTTGGATGAGAGCTGC+AGG | 0.590623 | 5.1:+17964761 | MS.gene72866:CDS |
| TTGGTTCAGTTGGGCCAGGA+CGG | 0.593555 | 5.1:+17964804 | MS.gene72866:CDS |
| CATGTCCATGTCCATGTCCA+TGG | 0.598261 | 5.1:-17960697 | None:intergenic |
| GAGGTAACCGTTGAAGCTGA+AGG | 0.598999 | 5.1:+17960662 | MS.gene72866:CDS |
| ACAGTTGCAGCAACAGGTGT+AGG | 0.603510 | 5.1:+17963897 | MS.gene72866:CDS |
| TGACTTTGAAGAATCCAGCC+GGG | 0.614345 | 5.1:-17963935 | None:intergenic |
| TACAGGTATAACAAACTCAC+TGG | 0.616362 | 5.1:+17963744 | MS.gene72866:intron |
| CGAAAATGAGATCGAATCAG+TGG | 0.616487 | 5.1:-17964297 | None:intergenic |
| CATTCTTGAAGTGAAACAGT+AGG | 0.619087 | 5.1:-17960983 | None:intergenic |
| TGAAGCTGACTGATAATGAG+AGG | 0.621573 | 5.1:-17960953 | None:intergenic |
| GCAGCACACACACAGCATCT+CGG | 0.621598 | 5.1:+17964014 | MS.gene72866:CDS |
| GCAGCGACAATGAAACGAGT+GGG | 0.628600 | 5.1:-17964499 | None:intergenic |
| ACCACCAAAACAACCAGCAG+CGG | 0.633849 | 5.1:-17964129 | None:intergenic |
| GAGTTGTTCCGGTGAAGGCG+CGG | 0.634731 | 5.1:-17964046 | None:intergenic |
| CATGGACATGGTCATGGTCA+TGG | 0.635962 | 5.1:+17960710 | MS.gene72866:CDS |
| CAGAACAAAAGCAAATGCAA+TGG | 0.636950 | 5.1:-17964458 | None:intergenic |
| CATGGACATGGACATGGACA+TGG | 0.640153 | 5.1:+17960698 | MS.gene72866:CDS |
| GAATCTAAACCAGAAACCAC+CGG | 0.650603 | 5.1:-17964959 | None:intergenic |
| GGACACAGTCACTGGAAATG+GGG | 0.658492 | 5.1:+17964620 | MS.gene72866:CDS |
| CATGGACATGGACATGGTCA+TGG | 0.665061 | 5.1:+17960704 | MS.gene72866:CDS |
| TTGGGAAATTCCCGTCGAGG+TGG | 0.666170 | 5.1:-17963866 | None:intergenic |
| TAACGAGAGAAGCTCTCCGG+TGG | 0.667063 | 5.1:+17964943 | MS.gene72866:CDS |
| TCTTGAAGTGAAACAGTAGG+TGG | 0.671080 | 5.1:-17960980 | None:intergenic |
| CCATTGTTGTGAATGATGCA+AGG | 0.672745 | 5.1:-17964385 | None:intergenic |
| CCATTCAGAGCACATCAACA+GGG | 0.673190 | 5.1:+17964663 | MS.gene72866:CDS |
| AGCAGCGACAATGAAACGAG+TGG | 0.675685 | 5.1:-17964500 | None:intergenic |
| GCAAGACCTCCAATAGCATG+AGG | 0.680349 | 5.1:-17964353 | None:intergenic |
| GTAACCGTTGAAGCTGAAGG+TGG | 0.694916 | 5.1:+17960665 | MS.gene72866:CDS |
| GCGCGTGGTTAAGATGAACT+CGG | 0.697491 | 5.1:+17964535 | MS.gene72866:CDS |
| GGTCATGGTCATGGTCAAGG+TGG | 0.728143 | 5.1:+17960719 | MS.gene72866:CDS |
| GGAAACATCAGTGATGCTGG+TGG | 0.756197 | 5.1:+17964890 | MS.gene72866:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAATTTAAAAATTA+TGG | + | chr5.1:17961742-17961761 | MS.gene72866:intron | 0.0% |
| !! | AAAAAATTGAAAAAAAATTC+TGG | + | chr5.1:17961783-17961802 | MS.gene72866:intron | 10.0% |
| !! | AAAAATATAAACTTACAAAT+AGG | - | chr5.1:17961127-17961146 | None:intergenic | 10.0% |
| !! | AAAATATAAACTTACAAATA+GGG | - | chr5.1:17961126-17961145 | None:intergenic | 10.0% |
| !! | AAATATAAAAAACATATCTT+AGG | - | chr5.1:17961076-17961095 | None:intergenic | 10.0% |
| !! | AATTTAACAAAAACAAAAAA+TGG | - | chr5.1:17962526-17962545 | None:intergenic | 10.0% |
| !! | ACAAAAATTAAGTTAAATAT+TGG | + | chr5.1:17962739-17962758 | MS.gene72866:intron | 10.0% |
| !! | CAAAAAATATTAAAAAATTC+TGG | + | chr5.1:17961908-17961927 | MS.gene72866:intron | 10.0% |
| !! | GAAAAAATATTAAAAAATTC+TGG | - | chr5.1:17962197-17962216 | None:intergenic | 10.0% |
| !! | GTAAATTTAAATTTAATTGT+CGG | + | chr5.1:17963080-17963099 | MS.gene72866:intron | 10.0% |
| !! | TAAAATATAAATGTAAATGT+AGG | - | chr5.1:17963676-17963695 | None:intergenic | 10.0% |
| !!! | AATTTTTTTATTACATAACT+GGG | - | chr5.1:17961722-17961741 | None:intergenic | 10.0% |
| !!! | CAAATTTTTTTTATAGTTTT+TGG | + | chr5.1:17961626-17961645 | MS.gene72866:intron | 10.0% |
| !!! | CAATTTTTTTTTATAGTTTT+TGG | - | chr5.1:17962418-17962437 | None:intergenic | 10.0% |
| !!! | TAATTTTTTTATTACATAAC+TGG | - | chr5.1:17961723-17961742 | None:intergenic | 10.0% |
| !! | AAACTATAAAAAAAAATTGC+AGG | + | chr5.1:17962419-17962438 | MS.gene72866:intron | 15.0% |
| !! | AAACTATAAAAAAAATTTGC+AGG | - | chr5.1:17961625-17961644 | None:intergenic | 15.0% |
| !! | AAATCAAATAATAATTCCAA+AGG | - | chr5.1:17963281-17963300 | None:intergenic | 15.0% |
| !! | AACTATAAAAAAAAATTGCA+GGG | + | chr5.1:17962420-17962439 | MS.gene72866:intron | 15.0% |
| !! | AACTATAAAAAAAATTTGCA+GGG | - | chr5.1:17961624-17961643 | None:intergenic | 15.0% |
| !! | AATTATGTAAAAGTAAAAAG+TGG | + | chr5.1:17963015-17963034 | MS.gene72866:intron | 15.0% |
| !! | TAAACAATAATAATTGTCTA+GGG | + | chr5.1:17963197-17963216 | MS.gene72866:intron | 15.0% |
| !! | TTAAACAATAATAATTGTCT+AGG | + | chr5.1:17963196-17963215 | MS.gene72866:intron | 15.0% |
| !!! | AATATTTTGTAGTATGATTT+GGG | + | chr5.1:17961437-17961456 | MS.gene72866:intron | 15.0% |
| !!! | ATGTAATTTATTTTTTCACT+AGG | + | chr5.1:17962981-17963000 | MS.gene72866:intron | 15.0% |
| !!! | ATTTTACTAAGAAAAAAGTA+TGG | + | chr5.1:17962457-17962476 | MS.gene72866:intron | 15.0% |
| !!! | ATTTTTCAAAAAATACAACT+TGG | - | chr5.1:17961372-17961391 | None:intergenic | 15.0% |
| !!! | ATTTTTGTTGTATATATCAA+TGG | - | chr5.1:17962727-17962746 | None:intergenic | 15.0% |
| !!! | ATTTTTTTATTACATAACTG+GGG | - | chr5.1:17961721-17961740 | None:intergenic | 15.0% |
| !!! | TTTTACTAAGAAAAAAGTAT+GGG | + | chr5.1:17962458-17962477 | MS.gene72866:intron | 15.0% |
| !!! | TTTTTCTTAGTAAAATCTAA+AGG | - | chr5.1:17962453-17962472 | None:intergenic | 15.0% |
| !! | AAAAACTAACTAATATGACA+AGG | - | chr5.1:17963563-17963582 | None:intergenic | 20.0% |
| !! | ATATCTTAGGAAAAAAAATG+TGG | - | chr5.1:17961063-17961082 | None:intergenic | 20.0% |
| !! | ATATTTATTGGAGATCTTTA+AGG | - | chr5.1:17962919-17962938 | None:intergenic | 20.0% |
| !! | ATCTCCAATAAATATATGAT+TGG | + | chr5.1:17962924-17962943 | MS.gene72866:intron | 20.0% |
| !! | ATTAGTTAGAAATATCTAAG+TGG | - | chr5.1:17961265-17961284 | None:intergenic | 20.0% |
| !! | TCAAGTACAATAATACAAAA+TGG | + | chr5.1:17963237-17963256 | MS.gene72866:intron | 20.0% |
| !! | TTAGTTAGAAATATCTAAGT+GGG | - | chr5.1:17961264-17961283 | None:intergenic | 20.0% |
| !!! | CAATATTTTGTAGTATGATT+TGG | + | chr5.1:17961436-17961455 | MS.gene72866:intron | 20.0% |
| !!! | GAAAGTGGTTTTTTAAAAAA+AGG | - | chr5.1:17962655-17962674 | None:intergenic | 20.0% |
| !!! | GATCAAATCATAATTCTTTT+TGG | - | chr5.1:17963307-17963326 | None:intergenic | 20.0% |
| !!! | TAATTTATTTTTTCACTAGG+TGG | + | chr5.1:17962984-17963003 | MS.gene72866:intron | 20.0% |
| !!! | TTTACTAAGAAAAAAGTATG+GGG | + | chr5.1:17962459-17962478 | MS.gene72866:intron | 20.0% |
| !!! | TTTTAGATTGGCTTAAATAT+GGG | + | chr5.1:17961560-17961579 | MS.gene72866:intron | 20.0% |
| !!! | TTTTTAGATTGGCTTAAATA+TGG | + | chr5.1:17961559-17961578 | MS.gene72866:intron | 20.0% |
| !!! | TTTTTTGAAAAAAGTAGTAG+TGG | + | chr5.1:17961469-17961488 | MS.gene72866:intron | 20.0% |
| !!! | TTTTTTGAAAGAATCTAAGT+GGG | - | chr5.1:17961233-17961252 | None:intergenic | 20.0% |
| !!! | TTTTTTTGAAAGAATCTAAG+TGG | - | chr5.1:17961234-17961253 | None:intergenic | 20.0% |
| ! | AGGTCCAATCATATATTTAT+TGG | - | chr5.1:17962931-17962950 | None:intergenic | 25.0% |
| ! | ATAAGTTTGCAATCATGAAA+AGG | + | chr5.1:17962572-17962591 | MS.gene72866:intron | 25.0% |
| ! | ATATTTCCAAAAGAAACCTT+TGG | + | chr5.1:17963262-17963281 | MS.gene72866:intron | 25.0% |
| ! | CATAAAAGTTTCTTACACAT+AGG | - | chr5.1:17962951-17962970 | None:intergenic | 25.0% |
| ! | GATATTTGAAGATGGAAAAA+GGG | - | chr5.1:17964334-17964353 | None:intergenic | 25.0% |
| ! | TATAATGGTTATGAAGAAGT+TGG | + | chr5.1:17960839-17960858 | MS.gene72866:CDS | 25.0% |
| ! | TATGTAAAAGTAAAAAGTGG+TGG | + | chr5.1:17963018-17963037 | MS.gene72866:intron | 25.0% |
| ! | TGTACCAAGGTTAATAAATA+GGG | - | chr5.1:17962697-17962716 | None:intergenic | 25.0% |
| ! | TTCAAAGTTTGTAAAACAAC+AGG | + | chr5.1:17963354-17963373 | MS.gene72866:intron | 25.0% |
| ! | TTGTACCAAGGTTAATAAAT+AGG | - | chr5.1:17962698-17962717 | None:intergenic | 25.0% |
| !! | ATAATTCCAAAGGTTTCTTT+TGG | - | chr5.1:17963271-17963290 | None:intergenic | 25.0% |
| !! | ATTTTTCCAGATTTTTTGCA+GGG | + | chr5.1:17962391-17962410 | MS.gene72866:intron | 25.0% |
| !! | CCAAAAACAAAAATTTTGCA+GGG | - | chr5.1:17961685-17961704 | None:intergenic | 25.0% |
| !! | CTATGTGTAAGAAACTTTTA+TGG | + | chr5.1:17962949-17962968 | MS.gene72866:intron | 25.0% |
| !! | TCCAAAAACAAAAATTTTGC+AGG | - | chr5.1:17961686-17961705 | None:intergenic | 25.0% |
| !!! | CAAAAAATGGCCTTATTTTA+TGG | - | chr5.1:17962513-17962532 | None:intergenic | 25.0% |
| !!! | TGATCAATCAATGTTTTGAA+GGG | + | chr5.1:17963322-17963341 | MS.gene72866:intron | 25.0% |
| !!! | TTGATCAATCAATGTTTTGA+AGG | + | chr5.1:17963321-17963340 | MS.gene72866:intron | 25.0% |
| AAAGTTTACATATGTGCTAC+AGG | + | chr5.1:17963727-17963746 | MS.gene72866:intron | 30.0% | |
| AAGGAATAACTTAGTGGTTT+AGG | - | chr5.1:17963605-17963624 | None:intergenic | 30.0% | |
| ACATAGGGTTCCATAAAATA+AGG | + | chr5.1:17962500-17962519 | MS.gene72866:intron | 30.0% | |
| CAATGGTTAATATTGTACCA+AGG | - | chr5.1:17962710-17962729 | None:intergenic | 30.0% | |
| CACTTCAGATTTCCATTTAA+TGG | + | chr5.1:17963447-17963466 | MS.gene72866:intron | 30.0% | |
| CCAAAAGTTTCAAATCTAGA+AGG | - | chr5.1:17960872-17960891 | None:intergenic | 30.0% | |
| GCATATTAACGACCATTAAA+TGG | - | chr5.1:17963462-17963481 | None:intergenic | 30.0% | |
| GGATATTTGAAGATGGAAAA+AGG | - | chr5.1:17964335-17964354 | None:intergenic | 30.0% | |
| TAAAAACAGCTTCATCTTGT+CGG | - | chr5.1:17963156-17963175 | None:intergenic | 30.0% | |
| TCAACCCTATTTATTAACCT+TGG | + | chr5.1:17962690-17962709 | MS.gene72866:intron | 30.0% | |
| TCATGATTGCAAACTTATAG+TGG | - | chr5.1:17962570-17962589 | None:intergenic | 30.0% | |
| TGCTGAAAACTTTGAACTTA+TGG | - | chr5.1:17963775-17963794 | None:intergenic | 30.0% | |
| TGTAGCACATATGTAAACTT+TGG | - | chr5.1:17963728-17963747 | None:intergenic | 30.0% | |
| TTCAAATATCCTCATGCTAT+TGG | + | chr5.1:17964344-17964363 | MS.gene72866:CDS | 30.0% | |
| TTTGCTAGTGAATTTAGTCA+TGG | - | chr5.1:17961101-17961120 | None:intergenic | 30.0% | |
| ! | AAGAATCTAAGTGGGATTTT+TGG | - | chr5.1:17961225-17961244 | None:intergenic | 30.0% |
| ! | AAGTTCAAAGTTTTCAGCAT+TGG | + | chr5.1:17963776-17963795 | MS.gene72866:CDS | 30.0% |
| ! | ATTGGCTTAAATATGGGTAT+TGG | + | chr5.1:17961566-17961585 | MS.gene72866:intron | 30.0% |
| ! | ATTTTGTGCTGTGAAAAACA+CGG | + | chr5.1:17963487-17963506 | MS.gene72866:intron | 30.0% |
| ! | CAAACTTATAGTGGAACAAA+CGG | - | chr5.1:17962561-17962580 | None:intergenic | 30.0% |
| ! | CATTTTTCCAGATTTTTTGC+AGG | + | chr5.1:17962390-17962409 | MS.gene72866:intron | 30.0% |
| ! | TAAGAAAAAAGTATGGGGTA+TGG | + | chr5.1:17962464-17962483 | MS.gene72866:intron | 30.0% |
| ! | TATTTTATGGAACCCTATGT+TGG | - | chr5.1:17962500-17962519 | None:intergenic | 30.0% |
| !! | CCTTCTAGATTTGAAACTTT+TGG | + | chr5.1:17960869-17960888 | MS.gene72866:CDS | 30.0% |
| !! | CTAGATTTGAAACTTTTGGT+TGG | + | chr5.1:17960873-17960892 | MS.gene72866:CDS | 30.0% |
| !! | TAATAAATAGGGTTGATGTC+CGG | - | chr5.1:17962686-17962705 | None:intergenic | 30.0% |
| !!! | AAAACTTGCCTATTTTTGCA+GGG | - | chr5.1:17961653-17961672 | None:intergenic | 30.0% |
| !!! | AGTGGTGGATACTTTTTTTA+AGG | + | chr5.1:17963033-17963052 | MS.gene72866:intron | 30.0% |
| !!! | CCCTGCAAAATTTTTGTTTT+TGG | + | chr5.1:17961682-17961701 | MS.gene72866:intron | 30.0% |
| !!! | CGATTTTCAGTGGATTAATT+TGG | + | chr5.1:17964234-17964253 | MS.gene72866:CDS | 30.0% |
| !!! | CTCTCTCTTGTTTTATTGTT+TGG | - | chr5.1:17962765-17962784 | None:intergenic | 30.0% |
| !!! | GTTTTTTTTGCTAGTGAACT+TGG | - | chr5.1:17961332-17961351 | None:intergenic | 30.0% |
| AAATATCCTCATGCTATTGG+AGG | + | chr5.1:17964347-17964366 | MS.gene72866:CDS | 35.0% | |
| ACCAACTTTACTCTTACTCA+AGG | + | chr5.1:17962620-17962639 | MS.gene72866:intron | 35.0% | |
| ACTTGGTTACTTACTCTAAG+TGG | - | chr5.1:17961355-17961374 | None:intergenic | 35.0% | |
| AGAGCGATATTATGAGTCTT+TGG | + | chr5.1:17964204-17964223 | MS.gene72866:CDS | 35.0% | |
| AGAGCTAGAGAAGCTTATAA+TGG | + | chr5.1:17960824-17960843 | MS.gene72866:CDS | 35.0% | |
| AGCATGAGGATATTTGAAGA+TGG | - | chr5.1:17964342-17964361 | None:intergenic | 35.0% | |
| ATAATGAGAGGAAAGACAAC+AGG | - | chr5.1:17960944-17960963 | None:intergenic | 35.0% | |
| CACATGATTAAGGAGTTTCA+AGG | - | chr5.1:17962866-17962885 | None:intergenic | 35.0% | |
| CAGAACAAAAGCAAATGCAA+TGG | - | chr5.1:17964461-17964480 | None:intergenic | 35.0% | |
| CATCGTTTAATTGTTCTCGA+AGG | - | chr5.1:17963624-17963643 | None:intergenic | 35.0% | |
| CATTCTTGAAGTGAAACAGT+AGG | - | chr5.1:17960986-17961005 | None:intergenic | 35.0% | |
| CCAACTTTACTCTTACTCAA+GGG | + | chr5.1:17962621-17962640 | MS.gene72866:intron | 35.0% | |
| CTACTGTTTCACTTCAAGAA+TGG | + | chr5.1:17960984-17961003 | MS.gene72866:CDS | 35.0% | |
| CTTGGTTACTTACTCTAAGT+GGG | - | chr5.1:17961354-17961373 | None:intergenic | 35.0% | |
| CTTTCTCTATATGGTATGCT+TGG | + | chr5.1:17964747-17964766 | MS.gene72866:CDS | 35.0% | |
| GAAAACAAGCATATTGCACA+TGG | - | chr5.1:17963410-17963429 | None:intergenic | 35.0% | |
| GAGCGATATTATGAGTCTTT+GGG | + | chr5.1:17964205-17964224 | MS.gene72866:CDS | 35.0% | |
| GGTTTGTAACAAAGCCATAA+AGG | - | chr5.1:17962603-17962622 | None:intergenic | 35.0% | |
| GTTGTTGTGTCACATGATTA+AGG | - | chr5.1:17962876-17962895 | None:intergenic | 35.0% | |
| TACAGGTATAACAAACTCAC+TGG | + | chr5.1:17963744-17963763 | MS.gene72866:intron | 35.0% | |
| TCAGGGTTTGGATTCTATTA+CGG | + | chr5.1:17964599-17964618 | MS.gene72866:CDS | 35.0% | |
| TTATTACATAACTGGGGTCA+GGG | - | chr5.1:17961715-17961734 | None:intergenic | 35.0% | |
| TTCTCGAAGGAATAACTTAG+TGG | - | chr5.1:17963611-17963630 | None:intergenic | 35.0% | |
| TTTATTACATAACTGGGGTC+AGG | - | chr5.1:17961716-17961735 | None:intergenic | 35.0% | |
| ! | ACAACAATGGCGATTTTCAT+GGG | + | chr5.1:17964398-17964417 | MS.gene72866:CDS | 35.0% |
| ! | ATTCGATCTCATTTTCGTCA+AGG | + | chr5.1:17964303-17964322 | MS.gene72866:CDS | 35.0% |
| ! | CTGCAAAAATAGGCAAGTTT+TGG | + | chr5.1:17961652-17961671 | MS.gene72866:intron | 35.0% |
| ! | GCACAGTTTTTCATTAGACA+AGG | + | chr5.1:17964077-17964096 | MS.gene72866:CDS | 35.0% |
| ! | GGAATTGTTGTGTTGCTATT+TGG | + | chr5.1:17964869-17964888 | MS.gene72866:CDS | 35.0% |
| ! | TTTTGTGCTGTGAAAAACAC+GGG | + | chr5.1:17963488-17963507 | MS.gene72866:intron | 35.0% |
| !! | AAGAAGGTGCTTTCTCTATA+TGG | + | chr5.1:17964738-17964757 | MS.gene72866:CDS | 35.0% |
| !! | AGTGGATTAATTTGGCTTGT+TGG | + | chr5.1:17964242-17964261 | MS.gene72866:CDS | 35.0% |
| !! | CAAAGTTTTCAGCATTGGAA+TGG | + | chr5.1:17963781-17963800 | MS.gene72866:CDS | 35.0% |
| !! | CATTGCATTTGCTTTTGTTC+TGG | + | chr5.1:17964459-17964478 | MS.gene72866:CDS | 35.0% |
| !! | GTGGATTAATTTGGCTTGTT+GGG | + | chr5.1:17964243-17964262 | MS.gene72866:CDS | 35.0% |
| !! | TTTTTGGTCCCTGCAAAAAT+AGG | + | chr5.1:17961642-17961661 | MS.gene72866:intron | 35.0% |
| !!! | CAAAACTTGCCTATTTTTGC+AGG | - | chr5.1:17961654-17961673 | None:intergenic | 35.0% |
| AAACCACTTTCATTACCCAC+CGG | + | chr5.1:17962664-17962683 | MS.gene72866:intron | 40.0% | |
| AACGAGTGGGAAAAGGAAAT+AGG | - | chr5.1:17964489-17964508 | None:intergenic | 40.0% | |
| AAGGAAAGGAAGCCAAGAAT+TGG | - | chr5.1:17963846-17963865 | None:intergenic | 40.0% | |
| ACAATGAAACGAGTGGGAAA+AGG | - | chr5.1:17964496-17964515 | None:intergenic | 40.0% | |
| ATCTTCATTCCCTACATTGC+CGG | + | chr5.1:17963963-17963982 | MS.gene72866:CDS | 40.0% | |
| CAAACACTTGTATACTCCCT+AGG | - | chr5.1:17962834-17962853 | None:intergenic | 40.0% | |
| CAAGCATATTGCACATGGAA+AGG | - | chr5.1:17963405-17963424 | None:intergenic | 40.0% | |
| CATCGAGTTCGTGTATCATA+TGG | - | chr5.1:17964178-17964197 | None:intergenic | 40.0% | |
| CCATTGTTGTGAATGATGCA+AGG | - | chr5.1:17964388-17964407 | None:intergenic | 40.0% | |
| CCCTTGAGTAAGAGTAAAGT+TGG | - | chr5.1:17962624-17962643 | None:intergenic | 40.0% | |
| CCTTGCATCATTCACAACAA+TGG | + | chr5.1:17964385-17964404 | MS.gene72866:CDS | 40.0% | |
| CGAAAATGAGATCGAATCAG+TGG | - | chr5.1:17964300-17964319 | None:intergenic | 40.0% | |
| GAATCTAAACCAGAAACCAC+CGG | - | chr5.1:17964962-17964981 | None:intergenic | 40.0% | |
| GAATGGAACAAAACTCATCC+TGG | + | chr5.1:17961001-17961020 | MS.gene72866:CDS | 40.0% | |
| GATGCTTAATATGAGACCGA+TGG | + | chr5.1:17963640-17963659 | MS.gene72866:intron | 40.0% | |
| GGAATGGACATCAATTGCTT+GGG | + | chr5.1:17963797-17963816 | MS.gene72866:CDS | 40.0% | |
| GGTGTGACAAATCCAACATA+GGG | + | chr5.1:17962485-17962504 | MS.gene72866:intron | 40.0% | |
| TCTTGAAGTGAAACAGTAGG+TGG | - | chr5.1:17960983-17961002 | None:intergenic | 40.0% | |
| TGCTTTCTTGAGAGTTGTTC+CGG | - | chr5.1:17964060-17964079 | None:intergenic | 40.0% | |
| TGGAATGGACATCAATTGCT+TGG | + | chr5.1:17963796-17963815 | MS.gene72866:CDS | 40.0% | |
| TGGTGTGACAAATCCAACAT+AGG | + | chr5.1:17962484-17962503 | MS.gene72866:intron | 40.0% | |
| TTGTTGGACAGCTTTGCATT+AGG | + | chr5.1:17964435-17964454 | MS.gene72866:CDS | 40.0% | |
| TTTGGAAACATCAGTGATGC+TGG | + | chr5.1:17964887-17964906 | MS.gene72866:CDS | 40.0% | |
| TTTGGTCCCTGCAAAAAATC+TGG | - | chr5.1:17962400-17962419 | None:intergenic | 40.0% | |
| ! | ATGAAAAGGCGTGTCCTTTA+TGG | + | chr5.1:17962586-17962605 | MS.gene72866:intron | 40.0% |
| ! | CACAACAATGGCGATTTTCA+TGG | + | chr5.1:17964397-17964416 | MS.gene72866:CDS | 40.0% |
| ! | CTGCAACTGTGATGAGTTTT+GGG | - | chr5.1:17963887-17963906 | None:intergenic | 40.0% |
| ! | GGGAGTATACAAGTGTTTGT+CGG | + | chr5.1:17962835-17962854 | MS.gene72866:intron | 40.0% |
| ! | GGTGGTGTGATTTTCATTGT+TGG | + | chr5.1:17964419-17964438 | MS.gene72866:CDS | 40.0% |
| ! | TAGTAGTGGTTAGCCATGAA+TGG | + | chr5.1:17961483-17961502 | MS.gene72866:intron | 40.0% |
| ! | TGAAGCTGACTGATAATGAG+AGG | - | chr5.1:17960956-17960975 | None:intergenic | 40.0% |
| ! | TGTAGTGATAGTGAGCCTAA+CGG | + | chr5.1:17963118-17963137 | MS.gene72866:intron | 40.0% |
| ! | TTTTCTCGCTTCTGTCTTCA+GGG | + | chr5.1:17964582-17964601 | MS.gene72866:CDS | 40.0% |
| ! | TTTTTCTCGCTTCTGTCTTC+AGG | + | chr5.1:17964581-17964600 | MS.gene72866:CDS | 40.0% |
| !! | CAAAACTGGCCTATTTTGCA+GGG | - | chr5.1:17961593-17961612 | None:intergenic | 40.0% |
| !! | GATTTTGCACGCTTTTGGAA+GGG | + | chr5.1:17964685-17964704 | MS.gene72866:CDS | 40.0% |
| !! | TGGGTTGTTTCGATTTTCAG+TGG | + | chr5.1:17964224-17964243 | MS.gene72866:CDS | 40.0% |
| !!! | GGATTTTTGGCTAGTGAACT+TGG | - | chr5.1:17961212-17961231 | None:intergenic | 40.0% |
| ACACTTGTATACTCCCTAGG+AGG | - | chr5.1:17962831-17962850 | None:intergenic | 45.0% | |
| ACATCAATTGCTTGGGCTAC+AGG | + | chr5.1:17963804-17963823 | MS.gene72866:CDS | 45.0% | |
| ATCTTAACCACGCGCAGTAA+AGG | - | chr5.1:17964530-17964549 | None:intergenic | 45.0% | |
| CCATTCAGAGCACATCAACA+GGG | + | chr5.1:17964663-17964682 | MS.gene72866:CDS | 45.0% | |
| GCAGCTTCAGAAGTTGCTAA+AGG | + | chr5.1:17960746-17960765 | MS.gene72866:CDS | 45.0% | |
| GCAGGGACTAAAACCAAAAC+TGG | - | chr5.1:17961607-17961626 | None:intergenic | 45.0% | |
| GCTGGATTCTTCAAAGTCAC+AGG | + | chr5.1:17963939-17963958 | MS.gene72866:CDS | 45.0% | |
| GGTGTTAGATTGTGCTCCAT+CGG | + | chr5.1:17964712-17964731 | MS.gene72866:CDS | 45.0% | |
| GTGTTAGATTGTGCTCCATC+GGG | + | chr5.1:17964713-17964732 | MS.gene72866:CDS | 45.0% | |
| TAATATGAGACCGATGGAGC+AGG | + | chr5.1:17963646-17963665 | MS.gene72866:intron | 45.0% | |
| TCAGCTCTGTTGTGTAAGTC+AGG | - | chr5.1:17960794-17960813 | None:intergenic | 45.0% | |
| TCTATTACGGACACAGTCAC+TGG | + | chr5.1:17964612-17964631 | MS.gene72866:CDS | 45.0% | |
| ! | ACAATGGCGATTTTCATGGG+TGG | + | chr5.1:17964401-17964420 | MS.gene72866:CDS | 45.0% |
| ! | ACAGGGATTTTGCACGCTTT+TGG | + | chr5.1:17964680-17964699 | MS.gene72866:CDS | 45.0% |
| ! | AGGAGTTTTCTTCTGTCTCC+CGG | + | chr5.1:17963917-17963936 | MS.gene72866:CDS | 45.0% |
| ! | CCTGCAAAATAGGCCAGTTT+TGG | + | chr5.1:17961591-17961610 | MS.gene72866:intron | 45.0% |
| ! | GCTGCAACTGTGATGAGTTT+TGG | - | chr5.1:17963888-17963907 | None:intergenic | 45.0% |
| ! | GCTTTTTGCACTGCTATTGC+TGG | + | chr5.1:17964848-17964867 | MS.gene72866:CDS | 45.0% |
| ! | GGATTTTGCACGCTTTTGGA+AGG | + | chr5.1:17964684-17964703 | MS.gene72866:CDS | 45.0% |
| ! | GGTTCACAGTTGGTTCAGTT+GGG | + | chr5.1:17964795-17964814 | MS.gene72866:CDS | 45.0% |
| ! | GTGACTTTGAAGAATCCAGC+CGG | - | chr5.1:17963939-17963958 | None:intergenic | 45.0% |
| ! | TGACTTTGAAGAATCCAGCC+GGG | - | chr5.1:17963938-17963957 | None:intergenic | 45.0% |
| !! | AAAGCACCTTCTTTTCCCGA+TGG | - | chr5.1:17964731-17964750 | None:intergenic | 45.0% |
| !! | AAATAGGGTTGATGTCCGGT+GGG | - | chr5.1:17962682-17962701 | None:intergenic | 45.0% |
| !! | CCAAAACTGGCCTATTTTGC+AGG | - | chr5.1:17961594-17961613 | None:intergenic | 45.0% |
| !! | GGTATTGGTCCCTGCAAAAT+AGG | + | chr5.1:17961581-17961600 | MS.gene72866:intron | 45.0% |
| !! | TAAATAGGGTTGATGTCCGG+TGG | - | chr5.1:17962683-17962702 | None:intergenic | 45.0% |
| !! | AAAAAAATATTAAAAAATTC+TGG | + | chr5.1:17962080-17962099 | MS.gene72866:intron | 5.0% |
| !! | AAAAAAATATTAAAAAATTC+TGG | - | chr5.1:17962099-17962080 | None:intergenic | 5.0% |
| !! | AGAAAAAAATATTAAAAATT+CGG | + | chr5.1:17961993-17962012 | MS.gene72866:intron | 5.0% |
| !! | ATAAAAAAATTAAAAAATTC+TGG | - | chr5.1:17962362-17962381 | None:intergenic | 5.0% |
| !! | ATAAAAAAATTTAAAAATTC+TGG | + | chr5.1:17961821-17961840 | MS.gene72866:intron | 5.0% |
| !! | ATAAAAATAATAAAAAATTC+TGG | + | chr5.1:17961859-17961878 | MS.gene72866:intron | 5.0% |
| !! | TAATAAAAATTAAAAAATTC+TGG | - | chr5.1:17962246-17962265 | None:intergenic | 5.0% |
| !!! | ATAAAAAATTTTAAAAAATC+TGG | + | chr5.1:17962031-17962050 | MS.gene72866:intron | 5.0% |
| !!! | GAAAAATTTTTTAAAAAATA+CGG | - | chr5.1:17962151-17962170 | None:intergenic | 5.0% |
| !!! | TTTTTATATTTTTTTTAGAT+TGG | + | chr5.1:17961548-17961567 | MS.gene72866:intron | 5.0% |
| AACCCTTCGCACTCCATTCA+TGG | - | chr5.1:17961499-17961518 | None:intergenic | 50.0% | |
| AACGAAGTCCTAATCCGTCC+TGG | - | chr5.1:17964821-17964840 | None:intergenic | 50.0% | |
| ACAGTTGCAGCAACAGGTGT+AGG | + | chr5.1:17963897-17963916 | MS.gene72866:CDS | 50.0% | |
| ACCACCAAAACAACCAGCAG+CGG | - | chr5.1:17964132-17964151 | None:intergenic | 50.0% | |
| ACGGACACAGTCACTGGAAA+TGG | + | chr5.1:17964618-17964637 | MS.gene72866:CDS | 50.0% | |
| AGAGCTGCAGGTTTGTGTGT+CGG | + | chr5.1:17964773-17964792 | MS.gene72866:CDS | 50.0% | |
| AGCAGCGACAATGAAACGAG+TGG | - | chr5.1:17964503-17964522 | None:intergenic | 50.0% | |
| AGCCATGAATGGAGTGCGAA+GGG | + | chr5.1:17961494-17961513 | MS.gene72866:intron | 50.0% | |
| CATGGACATGGACATGGACA+TGG | + | chr5.1:17960698-17960717 | MS.gene72866:CDS | 50.0% | |
| CATGGACATGGACATGGTCA+TGG | + | chr5.1:17960704-17960723 | MS.gene72866:CDS | 50.0% | |
| CATGGACATGGTCATGGTCA+TGG | + | chr5.1:17960710-17960729 | MS.gene72866:CDS | 50.0% | |
| CATGGTCATGGTCATGGTCA+AGG | + | chr5.1:17960716-17960735 | MS.gene72866:CDS | 50.0% | |
| CATGTCCATGTCCATGTCCA+TGG | - | chr5.1:17960700-17960719 | None:intergenic | 50.0% | |
| CGATAACGAGAGAAGCTCTC+CGG | + | chr5.1:17964940-17964959 | MS.gene72866:CDS | 50.0% | |
| CGGACACAGTCACTGGAAAT+GGG | + | chr5.1:17964619-17964638 | MS.gene72866:CDS | 50.0% | |
| CGGCACTATACATTGCCGTT+AGG | - | chr5.1:17963136-17963155 | None:intergenic | 50.0% | |
| CGGTGAAGATGCAGATCGTT+GGG | + | chr5.1:17964555-17964574 | MS.gene72866:CDS | 50.0% | |
| CTCATCACAGTTGCAGCAAC+AGG | + | chr5.1:17963891-17963910 | MS.gene72866:CDS | 50.0% | |
| CTTGAGAGTTGTTCCGGTGA+AGG | - | chr5.1:17964054-17964073 | None:intergenic | 50.0% | |
| GACACCACCTTCAGCTTCAA+CGG | - | chr5.1:17960672-17960691 | None:intergenic | 50.0% | |
| GAGGTAACCGTTGAAGCTGA+AGG | + | chr5.1:17960662-17960681 | MS.gene72866:CDS | 50.0% | |
| GCAAGACCTCCAATAGCATG+AGG | - | chr5.1:17964356-17964375 | None:intergenic | 50.0% | |
| GCAGCGACAATGAAACGAGT+GGG | - | chr5.1:17964502-17964521 | None:intergenic | 50.0% | |
| GCCAAGAATTGGTGCAGCTA+TGG | - | chr5.1:17963835-17963854 | None:intergenic | 50.0% | |
| GCCATAGCTGCACCAATTCT+TGG | + | chr5.1:17963831-17963850 | MS.gene72866:CDS | 50.0% | |
| GCCATTCAGAGCACATCAAC+AGG | + | chr5.1:17964662-17964681 | MS.gene72866:CDS | 50.0% | |
| GCGCGTGGTTAAGATGAACT+CGG | + | chr5.1:17964535-17964554 | MS.gene72866:CDS | 50.0% | |
| GCTATGATGCCGGCAATGTA+GGG | - | chr5.1:17963975-17963994 | None:intergenic | 50.0% | |
| GGAAACATCAGTGATGCTGG+TGG | + | chr5.1:17964890-17964909 | MS.gene72866:CDS | 50.0% | |
| GGACACAGTCACTGGAAATG+GGG | + | chr5.1:17964620-17964639 | MS.gene72866:CDS | 50.0% | |
| GTAACCGTTGAAGCTGAAGG+TGG | + | chr5.1:17960665-17960684 | MS.gene72866:CDS | 50.0% | |
| TAGCCATGAATGGAGTGCGA+AGG | + | chr5.1:17961493-17961512 | MS.gene72866:intron | 50.0% | |
| TATGCTTGGATGAGAGCTGC+AGG | + | chr5.1:17964761-17964780 | MS.gene72866:CDS | 50.0% | |
| TCACTGGAAATGGGGACACT+TGG | + | chr5.1:17964628-17964647 | MS.gene72866:CDS | 50.0% | |
| TCGCTTCTGTCTTCAGGGTT+TGG | + | chr5.1:17964587-17964606 | MS.gene72866:CDS | 50.0% | |
| TCGGTGAAGATGCAGATCGT+TGG | + | chr5.1:17964554-17964573 | MS.gene72866:CDS | 50.0% | |
| TGAATGGAGTGCGAAGGGTT+TGG | + | chr5.1:17961499-17961518 | MS.gene72866:intron | 50.0% | |
| TGATCTATGCTCGCCTCCTA+GGG | + | chr5.1:17962815-17962834 | MS.gene72866:intron | 50.0% | |
| TGCTATGATGCCGGCAATGT+AGG | - | chr5.1:17963976-17963995 | None:intergenic | 50.0% | |
| TGCTGCATTAGCAACTGTGC+TGG | - | chr5.1:17964000-17964019 | None:intergenic | 50.0% | |
| TGGCACTCACTGCTCTCAAA+AGG | + | chr5.1:17961021-17961040 | MS.gene72866:CDS | 50.0% | |
| TGTAGGTTCTCCTGCTCCAT+CGG | - | chr5.1:17963659-17963678 | None:intergenic | 50.0% | |
| TGTCCGGTGGGTAATGAAAG+TGG | - | chr5.1:17962670-17962689 | None:intergenic | 50.0% | |
| TGTGCTCCATCGGGAAAAGA+AGG | + | chr5.1:17964722-17964741 | MS.gene72866:CDS | 50.0% | |
| TTCCTTTCCTTCCACCTCGA+CGG | + | chr5.1:17963855-17963874 | MS.gene72866:CDS | 50.0% | |
| TTGTGTGTCGGGTTCACAGT+TGG | + | chr5.1:17964785-17964804 | MS.gene72866:CDS | 50.0% | |
| ! | CCCTGTTGATGTGCTCTGAA+TGG | - | chr5.1:17964666-17964685 | None:intergenic | 50.0% |
| ! | GGGTTCACAGTTGGTTCAGT+TGG | + | chr5.1:17964794-17964813 | MS.gene72866:CDS | 50.0% |
| !! | GCACGCTTTTGGAAGGGTTT+TGG | + | chr5.1:17964691-17964710 | MS.gene72866:CDS | 50.0% |
| !! | GGACGGATTAGGACTTCGTT+CGG | + | chr5.1:17964821-17964840 | MS.gene72866:CDS | 50.0% |
| !! | TTTTGAGAGCAGTGAGTGCC+AGG | - | chr5.1:17961022-17961041 | None:intergenic | 50.0% |
| !!! | GTTTTGGGAAATTCCCGTCG+AGG | - | chr5.1:17963872-17963891 | None:intergenic | 50.0% |
| AGAAGCTCTCCGGTGGTTTC+TGG | + | chr5.1:17964950-17964969 | MS.gene72866:CDS | 55.0% | |
| CATGTCCATGTCCATGGCCA+AGG | - | chr5.1:17960694-17960713 | None:intergenic | 55.0% | |
| CGGTAGCATGAAGCGAGAGA+CGG | - | chr5.1:17964112-17964131 | None:intergenic | 55.0% | |
| CTTGGCCATGGACATGGACA+TGG | + | chr5.1:17960692-17960711 | MS.gene72866:CDS | 55.0% | |
| GAAATTCCCGTCGAGGTGGA+AGG | - | chr5.1:17963865-17963884 | None:intergenic | 55.0% | |
| GAAGCTGAAGGTGGTGTCCT+TGG | + | chr5.1:17960674-17960693 | MS.gene72866:CDS | 55.0% | |
| GAGCTGCAGGTTTGTGTGTC+GGG | + | chr5.1:17964774-17964793 | MS.gene72866:CDS | 55.0% | |
| GCAGCACACACACAGCATCT+CGG | + | chr5.1:17964014-17964033 | MS.gene72866:CDS | 55.0% | |
| GCTACAACCTTTACTGCGCG+TGG | + | chr5.1:17964520-17964539 | MS.gene72866:CDS | 55.0% | |
| GGTAGCATGAAGCGAGAGAC+GGG | - | chr5.1:17964111-17964130 | None:intergenic | 55.0% | |
| GGTCATGGTCATGGTCAAGG+TGG | + | chr5.1:17960719-17960738 | MS.gene72866:CDS | 55.0% | |
| GTGATCTATGCTCGCCTCCT+AGG | + | chr5.1:17962814-17962833 | MS.gene72866:intron | 55.0% | |
| TAACGAGAGAAGCTCTCCGG+TGG | + | chr5.1:17964943-17964962 | MS.gene72866:CDS | 55.0% | |
| TCCTTTCCTTCCACCTCGAC+GGG | + | chr5.1:17963856-17963875 | MS.gene72866:CDS | 55.0% | |
| TTGGGAAATTCCCGTCGAGG+TGG | - | chr5.1:17963869-17963888 | None:intergenic | 55.0% | |
| TTGGTTCAGTTGGGCCAGGA+CGG | + | chr5.1:17964804-17964823 | MS.gene72866:CDS | 55.0% | |
| ! | ACAGTTGGTTCAGTTGGGCC+AGG | + | chr5.1:17964800-17964819 | MS.gene72866:CDS | 55.0% |
| ! | GTTTTCTTCTGTCTCCCGGC+TGG | + | chr5.1:17963921-17963940 | MS.gene72866:CDS | 55.0% |
| !! | GCTACCGCTGCTGGTTGTTT+TGG | + | chr5.1:17964125-17964144 | MS.gene72866:CDS | 55.0% |
| !! | TGTGCTGGCTGCTATGATGC+CGG | - | chr5.1:17963985-17964004 | None:intergenic | 55.0% |
| !!! | ACCGCTGCTGGTTGTTTTGG+TGG | + | chr5.1:17964128-17964147 | MS.gene72866:CDS | 55.0% |
| CTCATGATCCGCGCCTTCAC+CGG | + | chr5.1:17964038-17964057 | MS.gene72866:CDS | 60.0% | |
| GAAGGTGGTGTCCTTGGCCA+TGG | + | chr5.1:17960680-17960699 | MS.gene72866:CDS | 60.0% | |
| GAGTTGTTCCGGTGAAGGCG+CGG | - | chr5.1:17964049-17964068 | None:intergenic | 60.0% | |
| GGTGTCCTTGGCCATGGACA+TGG | + | chr5.1:17960686-17960705 | MS.gene72866:CDS | 60.0% | |
| TCCCGTCGAGGTGGAAGGAA+AGG | - | chr5.1:17963860-17963879 | None:intergenic | 60.0% | |
| TCGCTTCATGCTACCGCTGC+TGG | + | chr5.1:17964116-17964135 | MS.gene72866:CDS | 60.0% | |
| ! | CAGTTGGGCCAGGACGGATT+AGG | + | chr5.1:17964810-17964829 | MS.gene72866:CDS | 60.0% |
| !! | CTGGTGGTGCTGTTGCTGCA+GGG | + | chr5.1:17964906-17964925 | MS.gene72866:CDS | 60.0% |
| ! | CGGTGAAGGCGCGGATCATG+AGG | - | chr5.1:17964040-17964059 | None:intergenic | 65.0% |
| !! | GCTGGTGGTGCTGTTGCTGC+AGG | + | chr5.1:17964905-17964924 | MS.gene72866:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 17960656 | 17965003 | 17960656 | ID=MS.gene72866 |
| chr5.1 | mRNA | 17960656 | 17965003 | 17960656 | ID=MS.gene72866.t1;Parent=MS.gene72866 |
| chr5.1 | exon | 17960656 | 17961053 | 17960656 | ID=MS.gene72866.t1.exon1;Parent=MS.gene72866.t1 |
| chr5.1 | CDS | 17960656 | 17961053 | 17960656 | ID=cds.MS.gene72866.t1;Parent=MS.gene72866.t1 |
| chr5.1 | exon | 17963749 | 17965003 | 17963749 | ID=MS.gene72866.t1.exon2;Parent=MS.gene72866.t1 |
| chr5.1 | CDS | 17963749 | 17965003 | 17963749 | ID=cds.MS.gene72866.t1;Parent=MS.gene72866.t1 |
| Gene Sequence |
| Protein sequence |
