AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene73680

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene73680.t1 MTR_8g095240 92.471 425 28 1 1 421 1 425 0.0 767
MS.gene73680.t1 MTR_8g092410 55.342 365 105 9 100 421 32 381 6.50e-110 328
MS.gene73680.t1 MTR_8g092410 34.231 260 96 7 2 209 26 262 8.63e-27 110
MS.gene73680.t1 MTR_8g092090 65.021 243 75 5 97 335 10 246 1.44e-95 287
MS.gene73680.t1 MTR_8g092090 54.435 248 83 4 1 234 6 237 1.27e-76 238
MS.gene73680.t1 MTR_8g092090 37.968 187 77 2 174 337 8 178 1.43e-27 110
MS.gene73680.t1 MTR_4g107460 53.952 291 117 6 75 364 11 285 1.33e-89 275
MS.gene73680.t1 MTR_4g107460 54.583 240 94 3 8 233 13 251 7.96e-73 232
MS.gene73680.t1 MTR_4g107460 43.503 177 89 3 8 183 106 272 2.10e-31 122
MS.gene73680.t1 MTR_4g107460 30.108 186 60 2 222 337 9 194 4.08e-14 73.6
MS.gene73680.t1 MTR_8g080860 53.903 269 113 2 67 335 14 271 2.73e-83 257
MS.gene73680.t1 MTR_8g080860 51.341 261 93 3 50 287 20 269 1.91e-73 232
MS.gene73680.t1 MTR_8g080860 53.175 252 104 2 3 241 19 269 3.03e-72 229
MS.gene73680.t1 MTR_8g080860 42.029 207 107 1 1 194 63 269 1.61e-41 149
MS.gene73680.t1 MTR_8g080860 53.903 269 113 2 67 335 10 267 4.69e-83 256
MS.gene73680.t1 MTR_8g080860 51.341 261 93 3 50 287 16 265 2.98e-73 231
MS.gene73680.t1 MTR_8g080860 53.175 252 104 2 3 241 15 265 5.00e-72 228
MS.gene73680.t1 MTR_8g080860 42.029 207 107 1 1 194 59 265 2.08e-41 148
MS.gene73680.t1 MTR_6g043150 38.920 352 158 3 3 331 9 326 1.51e-62 205
MS.gene73680.t1 MTR_6g043150 32.714 269 147 3 92 337 6 263 3.59e-36 135
MS.gene73680.t1 MTR_6g043150 33.750 240 124 3 113 351 4 209 3.51e-30 119
MS.gene73680.t1 MTR_2g078470 36.872 358 169 4 3 337 9 332 1.00e-55 188
MS.gene73680.t1 MTR_2g078470 36.392 316 167 3 4 319 79 360 3.65e-53 182
MS.gene73680.t1 MTR_2g078470 39.381 226 104 2 4 206 148 363 1.02e-38 143
MS.gene73680.t1 MTR_8g080310 58.333 156 64 1 168 323 3 157 6.57e-51 169
MS.gene73680.t1 MTR_8g080310 58.065 155 51 2 89 230 3 156 3.76e-45 154
MS.gene73680.t1 MTR_8g080310 48.077 156 68 1 42 184 2 157 2.09e-34 125
MS.gene73680.t1 MTR_8g080310 37.143 105 66 0 1 105 53 157 2.19e-13 68.2
MS.gene73680.t1 MTR_8g080310 41.379 87 49 1 259 345 1 85 1.29e-11 62.8
MS.gene73680.t1 MTR_8g088930 37.685 337 152 9 118 410 12 334 1.34e-49 178
MS.gene73680.t1 MTR_8g088930 45.856 181 85 1 3 170 12 192 3.05e-38 147
MS.gene73680.t1 MTR_8g088930 38.220 191 101 3 45 219 5 194 3.90e-26 111
MS.gene73680.t1 MTR_8g088930 38.679 106 65 0 220 325 11 116 1.67e-13 72.8
MS.gene73680.t1 MTR_8g088930 37.685 337 152 9 118 410 12 334 1.53e-49 178
MS.gene73680.t1 MTR_8g088930 45.856 181 85 1 3 170 12 192 3.00e-38 147
MS.gene73680.t1 MTR_8g088930 38.122 181 98 2 52 219 15 194 3.72e-26 111
MS.gene73680.t1 MTR_8g088930 38.679 106 65 0 220 325 11 116 1.70e-13 72.8
MS.gene73680.t1 MTR_8g088930 37.685 337 152 9 118 410 12 334 5.98e-49 177
MS.gene73680.t1 MTR_8g088930 44.811 212 83 4 8 219 17 194 2.11e-41 156
MS.gene73680.t1 MTR_8g088930 39.423 104 63 0 220 323 11 114 2.36e-13 72.4
MS.gene73680.t1 MTR_8g088930 37.685 337 152 9 118 410 12 334 6.24e-49 177
MS.gene73680.t1 MTR_8g088930 44.811 212 83 4 8 219 17 194 2.14e-41 156
MS.gene73680.t1 MTR_8g088930 39.423 104 63 0 220 323 11 114 2.38e-13 72.4
MS.gene73680.t1 MTR_5g010840 35.780 327 144 5 2 327 109 370 1.86e-47 167
MS.gene73680.t1 MTR_5g010840 32.727 220 129 4 118 337 111 311 2.83e-25 106
MS.gene73680.t1 MTR_5g010840 34.615 130 62 1 1 107 239 368 1.79e-11 65.9
MS.gene73680.t1 MTR_8g080340 57.143 126 54 0 210 335 30 155 1.11e-39 140
MS.gene73680.t1 MTR_8g080340 41.489 188 54 2 7 194 22 153 6.56e-34 125
MS.gene73680.t1 MTR_8g080340 45.513 156 74 2 86 241 9 153 5.44e-30 114
MS.gene73680.t1 MTR_8g080340 47.260 146 53 2 165 287 9 153 2.96e-29 112
MS.gene73680.t1 MTR_3g023310 54.615 130 45 2 144 273 11 126 9.53e-35 127
MS.gene73680.t1 MTR_3g023310 49.167 120 58 3 109 227 9 126 2.16e-24 99.4
MS.gene73680.t1 MTR_3g023310 46.565 131 50 2 60 180 6 126 7.47e-24 98.2
MS.gene73680.t1 MTR_3g023310 36.517 178 76 3 190 367 11 151 1.32e-22 94.7
MS.gene73680.t1 MTR_3g023310 37.255 102 61 1 13 111 38 139 9.98e-12 63.9
MS.gene73680.t1 MTR_8g080350 33.977 259 127 5 3 260 125 340 2.14e-31 124
MS.gene73680.t1 MTR_8g080350 42.391 184 78 5 178 336 60 240 4.21e-31 123
MS.gene73680.t1 MTR_8g080350 31.405 242 94 6 125 300 99 334 4.78e-23 100
MS.gene73680.t1 MTR_8g080350 27.985 268 130 5 8 219 86 346 1.97e-19 90.1
MS.gene73680.t1 MTR_8g080350 29.661 236 92 9 154 323 84 311 2.18e-15 77.8
MS.gene73680.t1 MTR_5g058920 38.743 191 106 2 112 302 190 369 7.13e-29 117
MS.gene73680.t1 MTR_5g058920 34.211 228 109 3 34 254 174 367 1.42e-24 105
MS.gene73680.t1 MTR_5g058920 32.883 222 133 4 159 367 174 392 1.58e-23 102
MS.gene73680.t1 MTR_5g058920 34.135 208 123 4 76 280 174 370 5.74e-21 94.7
MS.gene73680.t1 MTR_5g058920 34.211 190 114 3 2 190 195 374 1.52e-19 90.5
MS.gene73680.t1 MTR_8g039100 37.158 183 102 1 9 178 58 240 3.81e-28 117
MS.gene73680.t1 MTR_8g039100 33.503 197 120 2 120 316 54 239 6.35e-25 107
MS.gene73680.t1 MTR_8g039100 31.683 202 123 3 84 271 40 240 6.38e-23 102
MS.gene73680.t1 MTR_8g039100 35.519 183 113 2 177 359 55 232 8.93e-20 92.4
MS.gene73680.t1 MTR_7g451440 35.784 204 111 4 102 305 184 367 7.69e-28 115
MS.gene73680.t1 MTR_7g451440 36.464 181 110 3 162 340 177 354 1.51e-23 102
MS.gene73680.t1 MTR_7g451440 34.254 181 109 1 8 188 196 366 2.00e-22 99.4
MS.gene73680.t1 MTR_7g451440 34.659 176 100 4 52 213 194 368 8.85e-21 94.4
MS.gene73680.t1 MTR_7g451440 36.875 160 91 2 3 162 214 363 3.83e-16 80.5
MS.gene73680.t1 MTR_1g062740 28.895 353 211 8 71 403 49 381 8.13e-27 113
MS.gene73680.t1 MTR_1g062740 36.571 175 98 1 9 170 56 230 1.39e-24 107
MS.gene73680.t1 MTR_1g062740 32.804 189 123 2 111 299 36 220 1.93e-22 100
MS.gene73680.t1 MTR_1g062740 31.818 154 104 1 172 325 48 200 1.24e-14 76.6
MS.gene73680.t1 MTR_1g062740 37.778 90 56 0 2 91 141 230 2.45e-11 66.2
MS.gene73680.t1 MTR_8g007500 36.410 195 105 3 115 305 193 372 1.29e-26 111
MS.gene73680.t1 MTR_8g007500 35.052 194 115 3 67 260 191 373 9.94e-23 100
MS.gene73680.t1 MTR_8g007500 36.471 170 105 2 171 340 193 359 5.94e-21 95.1
MS.gene73680.t1 MTR_8g007500 32.620 187 116 1 2 188 195 371 1.55e-19 90.9
MS.gene73680.t1 MTR_8g007500 33.143 175 104 2 52 213 199 373 3.34e-19 89.7
MS.gene73680.t1 MTR_1g050740 35.610 205 99 2 9 213 66 237 2.68e-26 112
MS.gene73680.t1 MTR_1g050740 30.493 223 121 3 48 270 59 247 5.10e-22 99.4
MS.gene73680.t1 MTR_1g050740 30.000 240 159 4 177 415 63 294 6.36e-18 86.7
MS.gene73680.t1 MTR_1g050740 32.544 169 104 1 2 170 82 240 6.42e-18 86.7
MS.gene73680.t1 MTR_1g050740 36.275 102 65 0 222 323 61 162 1.57e-12 70.1
MS.gene73680.t1 MTR_3g097260 35.500 200 96 1 8 207 59 225 5.87e-25 107
MS.gene73680.t1 MTR_3g097260 28.235 255 140 6 95 349 54 265 5.56e-14 74.3
MS.gene73680.t1 MTR_3g097260 31.892 185 93 2 2 186 76 227 1.34e-13 73.2
MS.gene73680.t1 MTR_4g099180 34.694 196 116 4 115 310 168 351 1.71e-24 105
MS.gene73680.t1 MTR_4g099180 35.393 178 112 2 163 340 160 334 1.64e-22 99.4
MS.gene73680.t1 MTR_4g099180 32.447 188 117 1 1 188 169 346 2.54e-21 95.9
MS.gene73680.t1 MTR_4g099180 30.603 232 116 5 30 260 161 348 1.08e-20 94.0
MS.gene73680.t1 MTR_4g099180 33.523 176 116 1 148 323 168 342 4.43e-16 80.1
MS.gene73680.t1 MTR_7g089950 34.906 212 99 3 2 207 63 241 2.73e-23 103
MS.gene73680.t1 MTR_7g089950 32.240 183 113 2 118 300 70 241 1.73e-20 94.4
MS.gene73680.t1 MTR_7g089950 32.934 167 111 1 157 323 76 241 1.32e-15 79.3
MS.gene73680.t1 MTR_7g089950 32.215 149 100 1 177 325 73 220 8.91e-15 77.0
MS.gene73680.t1 MTR_7g089950 36.275 102 65 0 222 323 71 172 5.98e-11 65.1
MS.gene73680.t1 MTR_8g095170 35.468 203 96 4 18 218 45 214 5.86e-23 101
MS.gene73680.t1 MTR_8g095170 30.151 199 129 2 111 309 22 210 6.73e-20 92.4
MS.gene73680.t1 MTR_8g095170 34.807 181 105 4 50 229 30 198 1.54e-17 85.1
MS.gene73680.t1 MTR_8g095170 32.948 173 114 2 177 348 32 203 9.86e-17 82.8
MS.gene73680.t1 MTR_8g095170 36.054 147 82 1 2 136 52 198 1.44e-16 82.0
MS.gene73680.t1 MTR_8g095170 32.787 183 110 4 94 275 28 198 1.13e-13 73.2
MS.gene73680.t1 MTR_8g095170 35.468 203 96 4 18 218 45 214 1.31e-22 100
MS.gene73680.t1 MTR_8g095170 30.151 199 129 2 111 309 22 210 1.71e-19 91.3
MS.gene73680.t1 MTR_8g095170 34.807 181 105 4 50 229 30 198 3.01e-17 84.3
MS.gene73680.t1 MTR_8g095170 32.948 173 114 2 177 348 32 203 2.33e-16 81.6
MS.gene73680.t1 MTR_8g095170 36.054 147 82 1 2 136 52 198 2.92e-16 81.3
MS.gene73680.t1 MTR_3g014650 32.642 193 116 4 93 273 86 276 2.27e-22 100
MS.gene73680.t1 MTR_3g014650 32.308 195 97 3 9 180 94 276 1.35e-20 94.7
MS.gene73680.t1 MTR_3g014650 40.650 123 73 0 7 129 126 248 1.06e-17 85.9
MS.gene73680.t1 MTR_3g014650 31.694 183 108 3 177 359 91 256 4.31e-15 77.8
MS.gene73680.t1 MTR_3g014650 30.178 169 97 2 50 207 89 247 7.77e-14 73.9
MS.gene73680.t1 MTR_3g073100 37.222 180 100 2 7 186 64 230 1.01e-21 98.2
MS.gene73680.t1 MTR_3g073100 32.057 209 129 4 50 256 57 254 2.98e-18 87.8
MS.gene73680.t1 MTR_3g073100 31.351 185 121 3 177 360 59 238 3.10e-16 81.3
MS.gene73680.t1 MTR_3g073100 30.935 139 96 0 198 336 57 195 2.06e-13 72.8
MS.gene73680.t1 MTR_5g459450 34.375 192 93 4 9 200 74 232 1.59e-21 97.8
MS.gene73680.t1 MTR_5g459450 33.333 177 107 2 48 224 67 232 2.42e-18 87.8
MS.gene73680.t1 MTR_5g459450 29.327 208 111 6 88 293 59 232 4.31e-17 84.0
MS.gene73680.t1 MTR_5g459450 33.333 147 97 1 177 323 71 216 2.66e-16 81.6
MS.gene73680.t1 MTR_5g459450 36.986 146 91 1 2 147 90 234 3.21e-16 81.3
MS.gene73680.t1 MTR_5g459450 32.143 140 94 1 198 337 69 207 2.51e-13 72.4
MS.gene73680.t1 MTR_3g072650 34.737 190 113 3 2 190 183 362 3.21e-21 95.5
MS.gene73680.t1 MTR_3g072650 30.734 218 117 2 37 254 172 355 6.14e-21 94.7
MS.gene73680.t1 MTR_3g072650 32.759 174 114 2 169 342 179 349 1.55e-20 93.6
MS.gene73680.t1 MTR_3g072650 34.286 210 104 4 114 323 180 355 3.40e-20 92.4
MS.gene73680.t1 MTR_3g072650 33.333 195 119 3 86 280 175 358 9.61e-19 88.2
MS.gene73680.t1 MTR_3g072650 34.737 190 113 3 2 190 183 362 3.22e-21 95.1
MS.gene73680.t1 MTR_3g072650 30.734 218 117 2 37 254 172 355 5.22e-21 94.7
MS.gene73680.t1 MTR_3g072650 32.609 184 119 3 159 342 171 349 1.35e-20 93.2
MS.gene73680.t1 MTR_3g072650 34.286 210 104 4 114 323 180 355 2.80e-20 92.4
MS.gene73680.t1 MTR_3g072650 33.333 195 119 3 86 280 175 358 1.03e-18 87.8
MS.gene73680.t1 MTR_4g099180 36.719 128 80 1 163 290 160 286 1.07e-13 72.0
MS.gene73680.t1 MTR_4g099180 32.394 142 82 2 196 323 132 273 8.59e-12 66.2
MS.gene73680.t1 MTR_4g099180 36.719 128 80 1 163 290 160 286 1.45e-13 71.6
MS.gene73680.t1 MTR_4g099180 32.394 142 82 2 196 323 132 273 1.32e-11 65.9
MS.gene73680.t1 MTR_3g023315 62.000 50 19 0 1 50 5 54 7.81e-13 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene73680.t1 AT1G60890 33.019 318 160 5 128 393 22 338 2.59e-37 144
MS.gene73680.t1 AT1G60890 39.594 197 109 1 2 198 21 207 8.49e-33 131
MS.gene73680.t1 AT1G60890 33.019 318 160 5 128 393 10 326 3.18e-37 144
MS.gene73680.t1 AT1G60890 39.594 197 109 1 2 198 9 195 1.09e-32 131
MS.gene73680.t1 AT1G10900 31.356 354 206 10 68 415 6 328 1.27e-33 134
MS.gene73680.t1 AT1G10900 41.053 190 102 2 9 198 16 195 8.14e-32 128
MS.gene73680.t1 AT1G10900 31.847 157 106 1 169 325 5 160 1.12e-15 79.7
MS.gene73680.t1 AT1G10900 31.356 354 206 10 68 415 6 328 1.27e-33 134
MS.gene73680.t1 AT1G10900 41.053 190 102 2 9 198 16 195 8.14e-32 128
MS.gene73680.t1 AT1G10900 31.847 157 106 1 169 325 5 160 1.12e-15 79.7
MS.gene73680.t1 AT1G10900 31.356 354 206 10 68 415 6 328 1.27e-33 134
MS.gene73680.t1 AT1G10900 41.053 190 102 2 9 198 16 195 8.14e-32 128
MS.gene73680.t1 AT1G10900 31.847 157 106 1 169 325 5 160 1.12e-15 79.7
MS.gene73680.t1 AT3G07960 35.242 227 106 4 9 227 32 225 5.59e-28 116
MS.gene73680.t1 AT3G07960 32.394 213 128 4 118 328 26 224 2.10e-25 108
MS.gene73680.t1 AT3G07960 34.783 184 115 2 176 359 28 206 8.71e-22 98.2
MS.gene73680.t1 AT3G07960 26.301 346 185 8 50 375 27 322 3.16e-21 96.7
MS.gene73680.t1 AT3G07960 35.242 227 106 4 9 227 32 225 5.59e-28 116
MS.gene73680.t1 AT3G07960 32.394 213 128 4 118 328 26 224 2.10e-25 108
MS.gene73680.t1 AT3G07960 34.783 184 115 2 176 359 28 206 8.71e-22 98.2
MS.gene73680.t1 AT3G07960 26.301 346 185 8 50 375 27 322 3.16e-21 96.7
MS.gene73680.t1 AT1G21980 35.349 215 119 3 8 217 80 279 5.63e-28 117
MS.gene73680.t1 AT1G21980 33.645 214 125 5 50 260 76 275 1.08e-21 98.2
MS.gene73680.t1 AT1G21980 30.097 206 110 5 93 298 73 244 1.58e-19 91.7
MS.gene73680.t1 AT1G21980 32.919 161 84 2 177 337 78 214 2.22e-16 82.0
MS.gene73680.t1 AT3G07960 35.242 227 106 4 9 227 32 225 6.82e-28 116
MS.gene73680.t1 AT3G07960 32.394 213 128 4 118 328 26 224 2.88e-25 108
MS.gene73680.t1 AT3G07960 34.783 184 115 2 176 359 28 206 1.26e-21 97.8
MS.gene73680.t1 AT3G07960 26.301 346 185 8 50 375 27 322 3.82e-21 96.3
MS.gene73680.t1 AT3G07960 35.242 227 106 4 9 227 32 225 1.56e-27 115
MS.gene73680.t1 AT3G07960 32.394 213 128 4 118 328 26 224 6.45e-25 107
MS.gene73680.t1 AT3G07960 34.783 184 115 2 176 359 28 206 2.46e-21 97.1
MS.gene73680.t1 AT3G07960 26.301 346 185 8 50 375 27 322 9.10e-21 95.5
MS.gene73680.t1 AT2G41210 37.433 187 107 2 9 195 75 251 1.81e-27 115
MS.gene73680.t1 AT2G41210 29.839 248 143 5 107 336 60 294 1.76e-23 103
MS.gene73680.t1 AT2G41210 32.512 203 114 4 94 274 68 269 2.60e-22 100
MS.gene73680.t1 AT2G41210 35.714 140 89 1 198 337 70 208 3.08e-14 75.5
MS.gene73680.t1 AT1G21920 36.458 192 111 2 114 305 169 349 1.00e-26 110
MS.gene73680.t1 AT1G21920 33.668 199 119 3 169 357 168 363 2.05e-22 98.2
MS.gene73680.t1 AT1G21920 34.043 188 114 2 1 188 171 348 6.53e-21 94.0
MS.gene73680.t1 AT1G21920 31.441 229 117 3 32 254 150 344 3.45e-20 92.0
MS.gene73680.t1 AT1G21920 35.772 123 79 0 200 322 152 274 1.41e-11 66.2
MS.gene73680.t1 AT1G21920 36.458 192 111 2 114 305 169 349 2.27e-26 110
MS.gene73680.t1 AT1G21920 33.668 199 119 3 169 357 168 363 5.83e-22 97.8
MS.gene73680.t1 AT1G21920 34.043 188 114 2 1 188 171 348 9.96e-21 94.0
MS.gene73680.t1 AT1G21920 32.174 230 114 5 32 254 150 344 4.81e-20 92.0
MS.gene73680.t1 AT1G21920 35.772 123 79 0 200 322 152 274 2.33e-11 65.5
MS.gene73680.t1 AT1G77660 35.849 212 120 3 114 320 173 373 3.53e-26 109
MS.gene73680.t1 AT1G77660 34.759 187 112 2 1 187 175 351 4.62e-21 95.1
MS.gene73680.t1 AT1G77660 37.419 155 96 1 169 323 172 325 2.99e-19 89.7
MS.gene73680.t1 AT1G77660 33.158 190 116 3 91 280 173 351 6.28e-19 88.6
MS.gene73680.t1 AT1G77660 34.426 183 105 4 44 212 172 353 4.59e-18 86.3
MS.gene73680.t1 AT1G77660 36.000 125 80 0 9 133 229 353 1.12e-15 79.0
MS.gene73680.t1 AT3G56960 35.176 199 96 2 9 207 77 242 5.29e-26 111
MS.gene73680.t1 AT3G56960 32.487 197 122 3 118 314 71 256 1.14e-22 101
MS.gene73680.t1 AT3G56960 31.405 242 150 4 95 336 71 296 1.90e-22 100
MS.gene73680.t1 AT3G56960 35.176 199 96 2 9 207 77 242 5.29e-26 111
MS.gene73680.t1 AT3G56960 32.487 197 122 3 118 314 71 256 1.14e-22 101
MS.gene73680.t1 AT3G56960 31.405 242 150 4 95 336 71 296 1.90e-22 100
MS.gene73680.t1 AT2G35170 29.565 230 153 2 119 340 216 444 2.11e-25 108
MS.gene73680.t1 AT2G35170 33.871 186 113 1 3 188 225 400 1.31e-21 97.1
MS.gene73680.t1 AT2G35170 35.227 176 111 2 167 342 218 390 4.37e-21 95.5
MS.gene73680.t1 AT2G35170 32.319 263 114 8 23 282 200 401 7.90e-21 94.7
MS.gene73680.t1 AT4G17080 33.702 181 119 1 119 299 247 426 3.45e-25 107
MS.gene73680.t1 AT4G17080 34.807 181 115 2 160 340 242 419 2.15e-22 99.8
MS.gene73680.t1 AT4G17080 32.308 260 111 8 26 282 235 432 7.15e-21 95.1
MS.gene73680.t1 AT4G17080 33.333 186 114 1 3 188 256 431 5.25e-20 92.4
MS.gene73680.t1 AT3G09920 34.703 219 109 3 1 219 50 234 1.05e-24 107
MS.gene73680.t1 AT3G09920 34.161 161 105 1 177 337 55 214 1.49e-15 79.3
MS.gene73680.t1 AT3G09920 34.703 219 109 3 1 219 50 234 1.05e-24 107
MS.gene73680.t1 AT3G09920 34.161 161 105 1 177 337 55 214 1.49e-15 79.3
MS.gene73680.t1 AT3G09920 34.703 219 109 3 1 219 50 234 1.05e-24 107
MS.gene73680.t1 AT3G09920 34.161 161 105 1 177 337 55 214 1.49e-15 79.3
MS.gene73680.t1 AT3G09920 34.703 219 109 3 1 219 50 234 1.05e-24 107
MS.gene73680.t1 AT3G09920 34.161 161 105 1 177 337 55 214 1.49e-15 79.3
MS.gene73680.t1 AT1G77740 36.313 179 104 1 8 186 81 249 6.92e-24 104
MS.gene73680.t1 AT1G77740 34.356 163 97 1 2 164 98 250 6.26e-19 89.7
MS.gene73680.t1 AT1G77740 29.614 233 122 4 50 282 77 267 1.48e-18 88.6
MS.gene73680.t1 AT1G77740 32.308 195 119 3 93 285 74 257 2.21e-18 88.2
MS.gene73680.t1 AT1G77740 31.056 161 87 2 177 337 79 215 5.12e-13 71.6
MS.gene73680.t1 AT1G77740 36.313 179 104 1 8 186 81 249 6.92e-24 104
MS.gene73680.t1 AT1G77740 34.356 163 97 1 2 164 98 250 6.26e-19 89.7
MS.gene73680.t1 AT1G77740 29.614 233 122 4 50 282 77 267 1.48e-18 88.6
MS.gene73680.t1 AT1G77740 32.308 195 119 3 93 285 74 257 2.21e-18 88.2
MS.gene73680.t1 AT1G77740 31.056 161 87 2 177 337 79 215 5.12e-13 71.6
MS.gene73680.t1 AT2G26420 34.928 209 101 3 8 214 57 232 7.84e-23 101
MS.gene73680.t1 AT2G26420 35.032 157 101 1 131 287 55 210 6.35e-19 89.7
MS.gene73680.t1 AT2G26420 36.691 139 87 1 199 337 54 191 8.92e-15 77.0
MS.gene73680.t1 AT2G26420 32.500 160 107 1 177 336 55 213 9.49e-15 77.0
MS.gene73680.t1 AT2G26420 34.928 209 101 3 8 214 57 232 7.84e-23 101
MS.gene73680.t1 AT2G26420 35.032 157 101 1 131 287 55 210 6.35e-19 89.7
MS.gene73680.t1 AT2G26420 36.691 139 87 1 199 337 54 191 8.92e-15 77.0
MS.gene73680.t1 AT2G26420 32.500 160 107 1 177 336 55 213 9.49e-15 77.0
MS.gene73680.t1 AT2G26420 34.928 209 101 3 8 214 57 232 9.35e-23 101
MS.gene73680.t1 AT2G26420 35.032 157 101 1 131 287 55 210 6.98e-19 89.7
MS.gene73680.t1 AT2G26420 36.691 139 87 1 199 337 54 191 9.72e-15 76.6
MS.gene73680.t1 AT2G26420 32.500 160 107 1 177 336 55 213 1.01e-14 76.6

Find 114 sgRNAs with CRISPR-Local

Find 138 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACCTCCATTCTTATAAGTT+TGG 0.224406 4.3:-7688761 None:intergenic
GATTCATATAATAGCTTTGA+TGG 0.263410 4.3:-7689801 None:intergenic
GGGATTGAGACTTTGGTTAA+TGG 0.265900 4.3:+7688825 MS.gene73680:CDS
TGGCTGTCTATATCGGAATT+TGG 0.280108 4.3:+7689015 MS.gene73680:CDS
ATTGCGCTTATACATGGATT+TGG 0.293895 4.3:+7688972 MS.gene73680:CDS
ACCTCCATTCTTATAAGTTT+GGG 0.299872 4.3:-7688760 None:intergenic
GGGATGTCTCCACTGGAAAT+TGG 0.304984 4.3:+7689153 MS.gene73680:CDS
AAATTGGAAAACAGGGAAAA+TGG 0.307307 4.3:+7689169 MS.gene73680:CDS
AAGTATGAGGGTGAATTCTT+TGG 0.311574 4.3:+7688714 MS.gene73680:CDS
GGGATGTCTACATCGGAAAT+TGG 0.312785 4.3:+7689294 MS.gene73680:CDS
GATACTGGTGATGTCTTCTA+TGG 0.312885 4.3:+7689077 MS.gene73680:CDS
CAGAGAAAGGCTTGAAGATA+TGG 0.320252 4.3:+7689540 MS.gene73680:CDS
GCTGCTGGTGATGTCTTTGA+TGG 0.325581 4.3:+7689356 MS.gene73680:CDS
TGGAAGAGGGATTGAGACTT+TGG 0.327504 4.3:+7688818 MS.gene73680:CDS
GGGATGTCTACATTGGAAAT+TGG 0.328769 4.3:+7688916 MS.gene73680:CDS
TCCACTGGAAATTGGAAAAC+AGG 0.334764 4.3:+7689161 MS.gene73680:CDS
TTCTATGGTTGTTGGTCAAA+TGG 0.344466 4.3:+7689092 MS.gene73680:CDS
AATGGACTTGCACATGGATA+TGG 0.345497 4.3:+7689110 MS.gene73680:CDS
GGGAAAATGGATGATGGGAG+AGG 0.351706 4.3:+7689182 MS.gene73680:CDS
TATGTGGGTGATTGGGTTGA+TGG 0.365803 4.3:+7688648 MS.gene73680:CDS
GCAAATGTGGCTGTCTATAT+CGG 0.371248 4.3:+7689008 MS.gene73680:CDS
GTGATGTCTTTGATGGTTGT+TGG 0.371599 4.3:+7689363 MS.gene73680:CDS
CGATCAATTGCGCTTATACA+TGG 0.376117 4.3:+7688966 MS.gene73680:CDS
AATGGACTTAGACATGGATT+TGG 0.376853 4.3:+7689251 MS.gene73680:CDS
GCCAACGGGGATGTCGATAT+TGG 0.377997 4.3:+7689425 MS.gene73680:CDS
AATGGACTTATACATGGATA+TGG 0.378270 4.3:+7689389 MS.gene73680:CDS
GGAAAATACACACGCTCAAA+TGG 0.381226 4.3:+7689479 MS.gene73680:CDS
GAGTTTATAGATTTGCAAAT+GGG 0.384860 4.3:+7689273 MS.gene73680:CDS
GAACAATATACGAGGGTGAT+TGG 0.386941 4.3:+7689501 MS.gene73680:CDS
GAGGTAGCTACATTGGAAAT+TGG 0.394936 4.3:+7688778 MS.gene73680:CDS
TTTGATGGTTGTTGGTCAAA+TGG 0.395785 4.3:+7689371 MS.gene73680:CDS
AAAGACAAAATGGATGGAAC+AGG 0.398399 4.3:+7689320 MS.gene73680:CDS
CAAAGAAGAGATCGTGCATA+TGG 0.398435 4.3:+7689765 MS.gene73680:CDS
AGTATGAGGGTGAATTCTTT+GGG 0.399117 4.3:+7688715 MS.gene73680:CDS
GGCATCTGGTCTGAGCCCTT+TGG 0.402901 4.3:+7689622 MS.gene73680:CDS
GATCAATATATGTGGGTGAT+TGG 0.405215 4.3:+7688640 MS.gene73680:CDS
TCATTGCAGATTTCAAATAA+AGG 0.411270 4.3:+7689590 MS.gene73680:CDS
GGGATTATGAGTTGGGATAC+TGG 0.413810 4.3:+7689062 MS.gene73680:CDS
TTATGTGTTACTTCTGAATA+CGG 0.414297 4.3:-7689695 None:intergenic
GAGTTTCTAGATTTGCAAAT+GGG 0.424260 4.3:+7688895 MS.gene73680:CDS
TGGATCAGGGATTATGAGTT+GGG 0.431926 4.3:+7689055 MS.gene73680:CDS
GTGATGTCTTCTATGGTTGT+TGG 0.434669 4.3:+7689084 MS.gene73680:CDS
GGAGTTTATAGATTTGCAAA+TGG 0.437498 4.3:+7689272 MS.gene73680:CDS
TGAGCCCTTTGGTTATCAAA+AGG 0.442205 4.3:+7689633 MS.gene73680:CDS
GGAGTTTCTAGATTTGCAAA+TGG 0.447368 4.3:+7688894 MS.gene73680:CDS
TGGGTTGATGGAGATAAGAC+AGG 0.450163 4.3:+7688660 MS.gene73680:CDS
AACAATATACGAGGGTGATT+GGG 0.451603 4.3:+7689502 MS.gene73680:CDS
GGGAATTGCCGTCATGGCAT+TGG 0.455461 4.3:+7688735 MS.gene73680:CDS
GAGTTTATAGATATGCCAAC+GGG 0.460082 4.3:+7689411 MS.gene73680:CDS
ATGTCGATATTGGTAACTTC+AGG 0.462222 4.3:+7689435 MS.gene73680:CDS
AAAGGTCAGTCTGAGGCATC+TGG 0.469589 4.3:+7689608 MS.gene73680:CDS
ATTTGAAATCTGCAATGAAG+TGG 0.473202 4.3:-7689585 None:intergenic
GAGTTTATAGATCCGCAAAT+GGG 0.476226 4.3:+7689132 MS.gene73680:CDS
TTTGATGGTTGTATGTCAAA+TGG 0.476812 4.3:+7689233 MS.gene73680:CDS
TGGAACAGGGATTATGAGTT+GGG 0.482314 4.3:+7689334 MS.gene73680:CDS
CCCTCATACTTGTCTCCTGA+TGG 0.482924 4.3:-7688702 None:intergenic
GGAGTTTATAGATCCGCAAA+TGG 0.482951 4.3:+7689131 MS.gene73680:CDS
TGCAATGAAGTGGAACCATC+AGG 0.492197 4.3:-7689575 None:intergenic
GAGCCCTTTGGTTATCAAAA+GGG 0.495737 4.3:+7689634 MS.gene73680:CDS
TTCTTTGGGAATTGCCGTCA+TGG 0.498740 4.3:+7688729 MS.gene73680:CDS
AGAGAAAGGCTTGAAGATAT+GGG 0.499256 4.3:+7689541 MS.gene73680:CDS
GCCATCAGGAGACAAGTATG+AGG 0.502897 4.3:+7688701 MS.gene73680:CDS
TGGTCAAATGGACTTATACA+TGG 0.503975 4.3:+7689383 MS.gene73680:CDS
ATCAATATATGTGGGTGATT+GGG 0.507414 4.3:+7688641 MS.gene73680:CDS
GCAAATGGGGATGTCTCCAC+TGG 0.507526 4.3:+7689146 MS.gene73680:CDS
AGTGGAGACATCCCCATTTG+CGG 0.507630 4.3:-7689144 None:intergenic
AAAATGAAAGGGATGGATCA+GGG 0.508482 4.3:+7689042 MS.gene73680:CDS
AAGAATGGAGGTAGCTACAT+TGG 0.512285 4.3:+7688771 MS.gene73680:CDS
GGCACCCAAACTTATAAGAA+TGG 0.512872 4.3:+7688756 MS.gene73680:CDS
GGAAAATGGATGATGGGAGA+GGG 0.523308 4.3:+7689183 MS.gene73680:CDS
AAAACAGGGAAAATGGATGA+TGG 0.525709 4.3:+7689176 MS.gene73680:CDS
ATGGATCAGGGATTATGAGT+TGG 0.528428 4.3:+7689054 MS.gene73680:CDS
ATGGAACAGGGATTATGAGT+TGG 0.528516 4.3:+7689333 MS.gene73680:CDS
GCAAATGGGGATGTCTACAT+TGG 0.539662 4.3:+7688909 MS.gene73680:CDS
GAGATGTTGTATTCAGATGA+GGG 0.541647 4.3:+7688552 None:intergenic
GGGATTATGAGTTGGGCTGC+TGG 0.543685 4.3:+7689341 MS.gene73680:CDS
GATGGACTTGCTCATGGCAA+AGG 0.546265 4.3:+7688597 MS.gene73680:CDS
AGAGATGTTGTATTCAGATG+AGG 0.548585 4.3:+7688551 None:intergenic
AAACAGGGAAAATGGATGAT+GGG 0.554857 4.3:+7689177 MS.gene73680:CDS
AAAGAAGAGATCGTGCATAT+GGG 0.555125 4.3:+7689766 MS.gene73680:CDS
TACATTGGTAACATCAAGGA+TGG 0.556522 4.3:+7688579 MS.gene73680:CDS
GGAAAGTACACATGGTCAGA+TGG 0.558174 4.3:+7688618 MS.gene73680:CDS
TGTTTACATTGGTAACATCA+AGG 0.558256 4.3:+7688575 MS.gene73680:CDS
ATCAAGGATGGACTTGCTCA+TGG 0.560602 4.3:+7688591 MS.gene73680:CDS
TCAGATGAGGGTGTTTACAT+TGG 0.560905 4.3:+7688564 MS.gene73680:CDS
ACCAATATCGACATCCCCGT+TGG 0.566301 4.3:-7689426 None:intergenic
AGTTTATAGATTTGCAAATG+GGG 0.568661 4.3:+7689274 MS.gene73680:CDS
GATGGAGATAAGACAGGGAA+AGG 0.568932 4.3:+7688666 MS.gene73680:CDS
GTCAGATGGATCAATATATG+TGG 0.572712 4.3:+7688632 MS.gene73680:CDS
ATCAAAAGGGAATATATGCA+AGG 0.589384 4.3:+7689647 MS.gene73680:CDS
CCACTGGAAATTGGAAAACA+GGG 0.596163 4.3:+7689162 MS.gene73680:CDS
ATGTCAAATGGACTTAGACA+TGG 0.597161 4.3:+7689245 MS.gene73680:CDS
TGGTCAAATGGACTTGCACA+TGG 0.600705 4.3:+7689104 MS.gene73680:CDS
AGTAAACTTCTCCATGACAA+TGG 0.603267 4.3:+7689458 MS.gene73680:CDS
GGACTGTTCATAGAGCCATC+AGG 0.607086 4.3:+7688687 MS.gene73680:CDS
TTTGGGTGCCAATGCCATGA+CGG 0.608944 4.3:-7688743 None:intergenic
TACATTGGAAATTGGACTTG+TGG 0.609300 4.3:+7688924 MS.gene73680:CDS
AGTTTCTAGATTTGCAAATG+GGG 0.609982 4.3:+7688896 MS.gene73680:CDS
GGGTTGATGGAGATAAGACA+GGG 0.616802 4.3:+7688661 MS.gene73680:CDS
TGGGCCCTTCAAAATCCTGA+TGG 0.617949 4.3:+7689560 MS.gene73680:CDS
CCATCAGGAGACAAGTATGA+GGG 0.619284 4.3:+7688702 MS.gene73680:CDS
TTCAAATAAAGGTCAGTCTG+AGG 0.626108 4.3:+7689601 MS.gene73680:CDS
AGTTTATAGATCCGCAAATG+GGG 0.634644 4.3:+7689133 MS.gene73680:CDS
GGAGTTTATAGATATGCCAA+CGG 0.642507 4.3:+7689410 MS.gene73680:CDS
AAGACAAAATGGATGGAACA+GGG 0.643823 4.3:+7689321 MS.gene73680:CDS
ACCCAAACTTATAAGAATGG+AGG 0.651940 4.3:+7688759 MS.gene73680:CDS
GCAAATGGGGATGTCTACAT+CGG 0.652522 4.3:+7689287 MS.gene73680:CDS
TATGCAAGGAGTTCTAATTG+TGG 0.655152 4.3:+7689661 MS.gene73680:CDS
CTCAAATGGAACAATATACG+AGG 0.666370 4.3:+7689493 MS.gene73680:CDS
AGTTTATAGATATGCAAATG+TGG 0.684385 4.3:+7688995 MS.gene73680:CDS
ATGGCAAAGGAAAGTACACA+TGG 0.689912 4.3:+7688610 MS.gene73680:CDS
TCAAATGGAACAATATACGA+GGG 0.722465 4.3:+7689494 MS.gene73680:CDS
TCAGATGGATCAATATATGT+GGG 0.730462 4.3:+7688633 MS.gene73680:CDS
AGTTTATAGATATGCCAACG+GGG 0.777388 4.3:+7689412 MS.gene73680:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAATAACAACAAAAAACA+GGG + chr4.3:7689722-7689741 MS.gene73680:CDS 15.0%
!! AATTTGGAAAAAAAATGAAA+GGG + chr4.3:7689031-7689050 MS.gene73680:CDS 15.0%
!! TAATAATAACAACAAAAAAC+AGG + chr4.3:7689721-7689740 MS.gene73680:CDS 15.0%
!! AAATTGGAAAAAAGACAAAA+TGG + chr4.3:7689310-7689329 MS.gene73680:CDS 20.0%
!! GAATTTGGAAAAAAAATGAA+AGG + chr4.3:7689030-7689049 MS.gene73680:CDS 20.0%
!! TGGAAAAATGATAAAAAAGA+TGG + chr4.3:7688798-7688817 MS.gene73680:CDS 20.0%
! AATGATAAAAAAGATGGAAG+AGG + chr4.3:7688804-7688823 MS.gene73680:CDS 25.0%
! AGTTTATAGATATGCAAATG+TGG + chr4.3:7688995-7689014 MS.gene73680:CDS 25.0%
! AGTTTATAGATTTGCAAATG+GGG + chr4.3:7689274-7689293 MS.gene73680:CDS 25.0%
! ATGATAAAAAAGATGGAAGA+GGG + chr4.3:7688805-7688824 MS.gene73680:CDS 25.0%
! GAGTTTATAGATTTGCAAAT+GGG + chr4.3:7689273-7689292 MS.gene73680:CDS 25.0%
! TCATTGCAGATTTCAAATAA+AGG + chr4.3:7689590-7689609 MS.gene73680:CDS 25.0%
!! AATGATTTTGTACATGGATA+TGG + chr4.3:7688873-7688892 MS.gene73680:CDS 25.0%
!!! TTATGTGTTACTTCTGAATA+CGG - chr4.3:7689698-7689717 None:intergenic 25.0%
AAATTGGAAAACAGGGAAAA+TGG + chr4.3:7689169-7689188 MS.gene73680:CDS 30.0%
ACCTCCATTCTTATAAGTTT+GGG - chr4.3:7688763-7688782 None:intergenic 30.0%
ATCAAAAGGGAATATATGCA+AGG + chr4.3:7689647-7689666 MS.gene73680:CDS 30.0%
ATCAATATATGTGGGTGATT+GGG + chr4.3:7688641-7688660 MS.gene73680:CDS 30.0%
GATAAAAAAGTGACAGAGAA+AGG + chr4.3:7689527-7689546 MS.gene73680:CDS 30.0%
GGAGTTTATAGATTTGCAAA+TGG + chr4.3:7689272-7689291 MS.gene73680:CDS 30.0%
TACCTCCATTCTTATAAGTT+TGG - chr4.3:7688764-7688783 None:intergenic 30.0%
TCAAATGGAACAATATACGA+GGG + chr4.3:7689494-7689513 MS.gene73680:CDS 30.0%
TCAGATGGATCAATATATGT+GGG + chr4.3:7688633-7688652 MS.gene73680:CDS 30.0%
TGGAAAAAAAATGAAAGGGA+TGG + chr4.3:7689035-7689054 MS.gene73680:CDS 30.0%
TGGAAAAAAGACAAAATGGA+TGG + chr4.3:7689314-7689333 MS.gene73680:CDS 30.0%
! AATGGACTTATACATGGATA+TGG + chr4.3:7689389-7689408 MS.gene73680:CDS 30.0%
! AGTTTCTAGATTTGCAAATG+GGG + chr4.3:7688896-7688915 MS.gene73680:CDS 30.0%
! ATTTGAAATCTGCAATGAAG+TGG - chr4.3:7689588-7689607 None:intergenic 30.0%
! GAGTTTCTAGATTTGCAAAT+GGG + chr4.3:7688895-7688914 MS.gene73680:CDS 30.0%
! TGGTCAAATGATTTTGTACA+TGG + chr4.3:7688867-7688886 MS.gene73680:CDS 30.0%
! TGTTTACATTGGTAACATCA+AGG + chr4.3:7688575-7688594 MS.gene73680:CDS 30.0%
! TTTGATGGTTGTATGTCAAA+TGG + chr4.3:7689233-7689252 MS.gene73680:CDS 30.0%
!! ATTCCCTTTTGATAACCAAA+GGG - chr4.3:7689640-7689659 None:intergenic 30.0%
!! GTTAATGGTGATGTTTTTGA+TGG + chr4.3:7688840-7688859 MS.gene73680:CDS 30.0%
!! TATTCCCTTTTGATAACCAA+AGG - chr4.3:7689641-7689660 None:intergenic 30.0%
AAAAATGAAAGGGATGGATC+AGG + chr4.3:7689041-7689060 MS.gene73680:CDS 35.0%
AAAACAGGGAAAATGGATGA+TGG + chr4.3:7689176-7689195 MS.gene73680:CDS 35.0%
AAAATGAAAGGGATGGATCA+GGG + chr4.3:7689042-7689061 MS.gene73680:CDS 35.0%
AAACAGGGAAAATGGATGAT+GGG + chr4.3:7689177-7689196 MS.gene73680:CDS 35.0%
AAAGAAGAGATCGTGCATAT+GGG + chr4.3:7689766-7689785 MS.gene73680:CDS 35.0%
AAAGACAAAATGGATGGAAC+AGG + chr4.3:7689320-7689339 MS.gene73680:CDS 35.0%
AACAATATACGAGGGTGATT+GGG + chr4.3:7689502-7689521 MS.gene73680:CDS 35.0%
AAGACAAAATGGATGGAACA+GGG + chr4.3:7689321-7689340 MS.gene73680:CDS 35.0%
AAGTATGAGGGTGAATTCTT+TGG + chr4.3:7688714-7688733 MS.gene73680:CDS 35.0%
ACCCAAACTTATAAGAATGG+AGG + chr4.3:7688759-7688778 MS.gene73680:CDS 35.0%
AGAGAAAGGCTTGAAGATAT+GGG + chr4.3:7689541-7689560 MS.gene73680:CDS 35.0%
AGTAAACTTCTCCATGACAA+TGG + chr4.3:7689458-7689477 MS.gene73680:CDS 35.0%
AGTATGAGGGTGAATTCTTT+GGG + chr4.3:7688715-7688734 MS.gene73680:CDS 35.0%
AGTTTATAGATATGCCAACG+GGG + chr4.3:7689412-7689431 MS.gene73680:CDS 35.0%
AGTTTATAGATCCGCAAATG+GGG + chr4.3:7689133-7689152 MS.gene73680:CDS 35.0%
ATTGCGCTTATACATGGATT+TGG + chr4.3:7688972-7688991 MS.gene73680:CDS 35.0%
CTCAAATGGAACAATATACG+AGG + chr4.3:7689493-7689512 MS.gene73680:CDS 35.0%
GAGTTTATAGATATGCCAAC+GGG + chr4.3:7689411-7689430 MS.gene73680:CDS 35.0%
GAGTTTATAGATCCGCAAAT+GGG + chr4.3:7689132-7689151 MS.gene73680:CDS 35.0%
GATCAATATATGTGGGTGAT+TGG + chr4.3:7688640-7688659 MS.gene73680:CDS 35.0%
GGAGTTTATAGATATGCCAA+CGG + chr4.3:7689410-7689429 MS.gene73680:CDS 35.0%
GTCAGATGGATCAATATATG+TGG + chr4.3:7688632-7688651 MS.gene73680:CDS 35.0%
TACATTGGAAATTGGACTTG+TGG + chr4.3:7688924-7688943 MS.gene73680:CDS 35.0%
TTCAAATAAAGGTCAGTCTG+AGG + chr4.3:7689601-7689620 MS.gene73680:CDS 35.0%
TTCTATGGTTGTTGGTCAAA+TGG + chr4.3:7689092-7689111 MS.gene73680:CDS 35.0%
! AATGGACTTAGACATGGATT+TGG + chr4.3:7689251-7689270 MS.gene73680:CDS 35.0%
! ATGTCAAATGGACTTAGACA+TGG + chr4.3:7689245-7689264 MS.gene73680:CDS 35.0%
! ATGTCGATATTGGTAACTTC+AGG + chr4.3:7689435-7689454 MS.gene73680:CDS 35.0%
! GGAGTTTCTAGATTTGCAAA+TGG + chr4.3:7688894-7688913 MS.gene73680:CDS 35.0%
! GTGTGTATTTTCCATTGTCA+TGG - chr4.3:7689472-7689491 None:intergenic 35.0%
! TACATTGGTAACATCAAGGA+TGG + chr4.3:7688579-7688598 MS.gene73680:CDS 35.0%
! TATGCAAGGAGTTCTAATTG+TGG + chr4.3:7689661-7689680 MS.gene73680:CDS 35.0%
! TGGTCAAATGGACTTATACA+TGG + chr4.3:7689383-7689402 MS.gene73680:CDS 35.0%
! TTTGATGGTTGTTGGTCAAA+TGG + chr4.3:7688855-7688874 MS.gene73680:CDS 35.0%
!! ACTTGTGGTGATGTTTTTGA+TGG + chr4.3:7688939-7688958 MS.gene73680:CDS 35.0%
!! GCTAATGGTGATGTTTTTGA+TGG + chr4.3:7689218-7689237 MS.gene73680:CDS 35.0%
!! GTGATGTTTTTGATGGTTGT+TGG + chr4.3:7688847-7688866 MS.gene73680:CDS 35.0%
AAGAATGGAGGTAGCTACAT+TGG + chr4.3:7688771-7688790 MS.gene73680:CDS 40.0%
ATGGAACAGGGATTATGAGT+TGG + chr4.3:7689333-7689352 MS.gene73680:CDS 40.0%
ATGGATCAGGGATTATGAGT+TGG + chr4.3:7689054-7689073 MS.gene73680:CDS 40.0%
CAAAGAAGAGATCGTGCATA+TGG + chr4.3:7689765-7689784 MS.gene73680:CDS 40.0%
CAGAGAAAGGCTTGAAGATA+TGG + chr4.3:7689540-7689559 MS.gene73680:CDS 40.0%
CCACTGGAAATTGGAAAACA+GGG + chr4.3:7689162-7689181 MS.gene73680:CDS 40.0%
CGATCAATTGCGCTTATACA+TGG + chr4.3:7688966-7688985 MS.gene73680:CDS 40.0%
GAACAATATACGAGGGTGAT+TGG + chr4.3:7689501-7689520 MS.gene73680:CDS 40.0%
GAGCCCTTTGGTTATCAAAA+GGG + chr4.3:7689634-7689653 MS.gene73680:CDS 40.0%
GAGGTAGCTACATTGGAAAT+TGG + chr4.3:7688778-7688797 MS.gene73680:CDS 40.0%
GCAAATGTGGCTGTCTATAT+CGG + chr4.3:7689008-7689027 MS.gene73680:CDS 40.0%
GGAAAATACACACGCTCAAA+TGG + chr4.3:7689479-7689498 MS.gene73680:CDS 40.0%
GGAGTTTATAGATCCGCAAA+TGG + chr4.3:7689131-7689150 MS.gene73680:CDS 40.0%
GGCACCCAAACTTATAAGAA+TGG + chr4.3:7688756-7688775 MS.gene73680:CDS 40.0%
GGGATGTCTACATTGGAAAT+TGG + chr4.3:7688916-7688935 MS.gene73680:CDS 40.0%
GGGATTGAGACTTTGGTTAA+TGG + chr4.3:7688825-7688844 MS.gene73680:CDS 40.0%
GTGATGTCTTCTATGGTTGT+TGG + chr4.3:7689084-7689103 MS.gene73680:CDS 40.0%
TCCACTGGAAATTGGAAAAC+AGG + chr4.3:7689161-7689180 MS.gene73680:CDS 40.0%
TGAGCCCTTTGGTTATCAAA+AGG + chr4.3:7689633-7689652 MS.gene73680:CDS 40.0%
TGGAACAGGGATTATGAGTT+GGG + chr4.3:7689334-7689353 MS.gene73680:CDS 40.0%
TGGATCAGGGATTATGAGTT+GGG + chr4.3:7689055-7689074 MS.gene73680:CDS 40.0%
TGGCTGTCTATATCGGAATT+TGG + chr4.3:7689015-7689034 MS.gene73680:CDS 40.0%
! AATGGACTTGCACATGGATA+TGG + chr4.3:7689110-7689129 MS.gene73680:CDS 40.0%
! ATGGCAAAGGAAAGTACACA+TGG + chr4.3:7688610-7688629 MS.gene73680:CDS 40.0%
! ATGGGAGAGGGATTTTCAAT+TGG + chr4.3:7689195-7689214 MS.gene73680:CDS 40.0%
! GATACTGGTGATGTCTTCTA+TGG + chr4.3:7689077-7689096 MS.gene73680:CDS 40.0%
! GGAACCATCAGGATTTTGAA+GGG - chr4.3:7689567-7689586 None:intergenic 40.0%
! GGGATTTTCAATTGGGCTAA+TGG + chr4.3:7689203-7689222 MS.gene73680:CDS 40.0%
! GTGATGTCTTTGATGGTTGT+TGG + chr4.3:7689363-7689382 MS.gene73680:CDS 40.0%
! TGGAACCATCAGGATTTTGA+AGG - chr4.3:7689568-7689587 None:intergenic 40.0%
! TGGGAGAGGGATTTTCAATT+GGG + chr4.3:7689196-7689215 MS.gene73680:CDS 40.0%
!! TCAGATGAGGGTGTTTACAT+TGG + chr4.3:7688564-7688583 MS.gene73680:CDS 40.0%
CCATCAGGAGACAAGTATGA+GGG + chr4.3:7688702-7688721 MS.gene73680:CDS 45.0%
GATGGAGATAAGACAGGGAA+AGG + chr4.3:7688666-7688685 MS.gene73680:CDS 45.0%
GCAAATGGGGATGTCTACAT+CGG + chr4.3:7688909-7688928 MS.gene73680:CDS 45.0%
GCAAATGGGGATGTCTACAT+TGG + chr4.3:7688909-7688928 MS.gene73680:CDS 45.0%
GGGATGTCTACATCGGAAAT+TGG + chr4.3:7689294-7689313 MS.gene73680:CDS 45.0%
TGCAATGAAGTGGAACCATC+AGG - chr4.3:7689578-7689597 None:intergenic 45.0%
TGGAAGAGGGATTGAGACTT+TGG + chr4.3:7688818-7688837 MS.gene73680:CDS 45.0%
! ATCAAGGATGGACTTGCTCA+TGG + chr4.3:7688591-7688610 MS.gene73680:CDS 45.0%
! CCCTGTTTTCCAATTTCCAG+TGG - chr4.3:7689165-7689184 None:intergenic 45.0%
! GGAAAGTACACATGGTCAGA+TGG + chr4.3:7688618-7688637 MS.gene73680:CDS 45.0%
! GGGATTATGAGTTGGGATAC+TGG + chr4.3:7689062-7689081 MS.gene73680:CDS 45.0%
! TGGTCAAATGGACTTGCACA+TGG + chr4.3:7689104-7689123 MS.gene73680:CDS 45.0%
! TTCTTTGGGAATTGCCGTCA+TGG + chr4.3:7688729-7688748 MS.gene73680:CDS 45.0%
!! GGAAAATGGATGATGGGAGA+GGG + chr4.3:7689183-7689202 MS.gene73680:CDS 45.0%
!! GGGTTGATGGAGATAAGACA+GGG + chr4.3:7688661-7688680 MS.gene73680:CDS 45.0%
!! TATGTGGGTGATTGGGTTGA+TGG + chr4.3:7688648-7688667 MS.gene73680:CDS 45.0%
!! TGGGTTGATGGAGATAAGAC+AGG + chr4.3:7688660-7688679 MS.gene73680:CDS 45.0%
ACCAATATCGACATCCCCGT+TGG - chr4.3:7689429-7689448 None:intergenic 50.0%
AGTGGAGACATCCCCATTTG+CGG - chr4.3:7689147-7689166 None:intergenic 50.0%
CCCTCATACTTGTCTCCTGA+TGG - chr4.3:7688705-7688724 None:intergenic 50.0%
GCCATCAGGAGACAAGTATG+AGG + chr4.3:7688701-7688720 MS.gene73680:CDS 50.0%
GGACTGTTCATAGAGCCATC+AGG + chr4.3:7688687-7688706 MS.gene73680:CDS 50.0%
GGGATGTCTCCACTGGAAAT+TGG + chr4.3:7689153-7689172 MS.gene73680:CDS 50.0%
TGGGCCCTTCAAAATCCTGA+TGG + chr4.3:7689560-7689579 MS.gene73680:CDS 50.0%
TTTGGGTGCCAATGCCATGA+CGG - chr4.3:7688746-7688765 None:intergenic 50.0%
! AAAGGTCAGTCTGAGGCATC+TGG + chr4.3:7689608-7689627 MS.gene73680:CDS 50.0%
! GATGGACTTGCTCATGGCAA+AGG + chr4.3:7688597-7688616 MS.gene73680:CDS 50.0%
! GCTGCTGGTGATGTCTTTGA+TGG + chr4.3:7689356-7689375 MS.gene73680:CDS 50.0%
!! GGGAAAATGGATGATGGGAG+AGG + chr4.3:7689182-7689201 MS.gene73680:CDS 50.0%
GCAAATGGGGATGTCTCCAC+TGG + chr4.3:7689146-7689165 MS.gene73680:CDS 55.0%
GCCAACGGGGATGTCGATAT+TGG + chr4.3:7689425-7689444 MS.gene73680:CDS 55.0%
GGGAATTGCCGTCATGGCAT+TGG + chr4.3:7688735-7688754 MS.gene73680:CDS 55.0%
! GGGATTATGAGTTGGGCTGC+TGG + chr4.3:7689341-7689360 MS.gene73680:CDS 55.0%
GGCATCTGGTCTGAGCCCTT+TGG + chr4.3:7689622-7689641 MS.gene73680:CDS 60.0%


Chromosome Type Strat End Strand Name
chr4.3 gene 7688555 7689820 7688555 ID=MS.gene73680
chr4.3 mRNA 7688555 7689820 7688555 ID=MS.gene73680.t1;Parent=MS.gene73680
chr4.3 exon 7688555 7689820 7688555 ID=MS.gene73680.t1.exon1;Parent=MS.gene73680.t1
chr4.3 CDS 7688555 7689820 7688555 ID=cds.MS.gene73680.t1;Parent=MS.gene73680.t1
Gene Sequence

>MS.gene73680

ATGTTGTATTCAGATGAGGGTGTTTACATTGGTAACATCAAGGATGGACTTGCTCATGGCAAAGGAAAGTACACATGGTCAGATGGATCAATATATGTGGGTGATTGGGTTGATGGAGATAAGACAGGGAAAGGACTGTTCATAGAGCCATCAGGAGACAAGTATGAGGGTGAATTCTTTGGGAATTGCCGTCATGGCATTGGCACCCAAACTTATAAGAATGGAGGTAGCTACATTGGAAATTGGAAAAATGATAAAAAAGATGGAAGAGGGATTGAGACTTTGGTTAATGGTGATGTTTTTGATGGTTGTTGGTCAAATGATTTTGTACATGGATATGGAGTTTCTAGATTTGCAAATGGGGATGTCTACATTGGAAATTGGACTTGTGGTGATGTTTTTGATGGTTGTCGATCAATTGCGCTTATACATGGATTTGGAGTTTATAGATATGCAAATGTGGCTGTCTATATCGGAATTTGGAAAAAAAATGAAAGGGATGGATCAGGGATTATGAGTTGGGATACTGGTGATGTCTTCTATGGTTGTTGGTCAAATGGACTTGCACATGGATATGGAGTTTATAGATCCGCAAATGGGGATGTCTCCACTGGAAATTGGAAAACAGGGAAAATGGATGATGGGAGAGGGATTTTCAATTGGGCTAATGGTGATGTTTTTGATGGTTGTATGTCAAATGGACTTAGACATGGATTTGGAGTTTATAGATTTGCAAATGGGGATGTCTACATCGGAAATTGGAAAAAAGACAAAATGGATGGAACAGGGATTATGAGTTGGGCTGCTGGTGATGTCTTTGATGGTTGTTGGTCAAATGGACTTATACATGGATATGGAGTTTATAGATATGCCAACGGGGATGTCGATATTGGTAACTTCAGGAGTAAACTTCTCCATGACAATGGAAAATACACACGCTCAAATGGAACAATATACGAGGGTGATTGGGTTGATAAAAAAGTGACAGAGAAAGGCTTGAAGATATGGGCCCTTCAAAATCCTGATGGTTCCACTTCATTGCAGATTTCAAATAAAGGTCAGTCTGAGGCATCTGGTCTGAGCCCTTTGGTTATCAAAAGGGAATATATGCAAGGAGTTCTAATTGTGGAGAAAATCAGACCGTATTCAGAAGTAACACATAATAATAATAATAACAACAAAAAACAGGGTGCATTTAGTGCGAAGAAAGCAAAGAAGAGATCGTGCATATGGGCATTTTTGAAGACCATCAAAGCTATTATATGA
Protein sequence

>MS.gene73680.t1

MLYSDEGVYIGNIKDGLAHGKGKYTWSDGSIYVGDWVDGDKTGKGLFIEPSGDKYEGEFFGNCRHGIGTQTYKNGGSYIGNWKNDKKDGRGIETLVNGDVFDGCWSNDFVHGYGVSRFANGDVYIGNWTCGDVFDGCRSIALIHGFGVYRYANVAVYIGIWKKNERDGSGIMSWDTGDVFYGCWSNGLAHGYGVYRSANGDVSTGNWKTGKMDDGRGIFNWANGDVFDGCMSNGLRHGFGVYRFANGDVYIGNWKKDKMDGTGIMSWAAGDVFDGCWSNGLIHGYGVYRYANGDVDIGNFRSKLLHDNGKYTRSNGTIYEGDWVDKKVTEKGLKIWALQNPDGSTSLQISNKGQSEASGLSPLVIKREYMQGVLIVEKIRPYSEVTHNNNNNNKKQGAFSAKKAKKRSCIWAFLKTIKAII