Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052052.t1 | XP_003597439.1 | 84.8 | 448 | 65 | 2 | 1 | 448 | 1 | 445 | 3.70E-192 | 681 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052052.t1 | G7IUC5 | 84.8 | 448 | 65 | 2 | 1 | 448 | 1 | 445 | 2.7e-192 | 681.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene052052.t1 | TF | Trihelix |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049983 | MS.gene052052 | 0.803672 | 3.12E-49 | -1.69E-46 |
| MS.gene050654 | MS.gene052052 | 0.811299 | 7.51E-51 | -1.69E-46 |
| MS.gene052052 | MS.gene052434 | 0.808411 | 3.14E-50 | -1.69E-46 |
| MS.gene052052 | MS.gene052463 | 0.823683 | 1.21E-53 | -1.69E-46 |
| MS.gene052052 | MS.gene054479 | 0.825596 | 4.30E-54 | -1.69E-46 |
| MS.gene052052 | MS.gene05458 | 0.803674 | 3.11E-49 | -1.69E-46 |
| MS.gene052052 | MS.gene055513 | 0.802505 | 5.43E-49 | -1.69E-46 |
| MS.gene052052 | MS.gene055864 | 0.833721 | 4.53E-56 | -1.69E-46 |
| MS.gene052052 | MS.gene060932 | 0.809262 | 2.06E-50 | -1.69E-46 |
| MS.gene052052 | MS.gene062321 | 0.806305 | 8.77E-50 | -1.69E-46 |
| MS.gene052052 | MS.gene063636 | 0.826401 | 2.77E-54 | -1.69E-46 |
| MS.gene052052 | MS.gene065159 | 0.828246 | 1.00E-54 | -1.69E-46 |
| MS.gene052052 | MS.gene065460 | 0.822707 | 2.05E-53 | -1.69E-46 |
| MS.gene052052 | MS.gene066405 | 0.807613 | 4.64E-50 | -1.69E-46 |
| MS.gene052052 | MS.gene066506 | 0.800598 | 1.34E-48 | -1.69E-46 |
| MS.gene052052 | MS.gene067043 | 0.82183 | 3.28E-53 | -1.69E-46 |
| MS.gene052052 | MS.gene067812 | 0.801348 | 9.39E-49 | -1.69E-46 |
| MS.gene052052 | MS.gene072762 | 0.813031 | 3.14E-51 | -1.69E-46 |
| MS.gene052052 | MS.gene073387 | 0.814558 | 1.45E-51 | -1.69E-46 |
| MS.gene052052 | MS.gene07510 | 0.804024 | 2.63E-49 | -1.69E-46 |
| MS.gene052052 | MS.gene08202 | 0.823945 | 1.05E-53 | -1.69E-46 |
| MS.gene052052 | MS.gene08336 | 0.802911 | 4.48E-49 | -1.69E-46 |
| MS.gene052052 | MS.gene08922 | 0.800399 | 1.47E-48 | -1.69E-46 |
| MS.gene052052 | MS.gene20554 | 0.820486 | 6.69E-53 | -1.69E-46 |
| MS.gene052052 | MS.gene20621 | 0.80367 | 3.12E-49 | -1.69E-46 |
| MS.gene052052 | MS.gene20985 | 0.803139 | 4.02E-49 | -1.69E-46 |
| MS.gene052052 | MS.gene21056 | 0.80839 | 3.17E-50 | -1.69E-46 |
| MS.gene052052 | MS.gene21282 | 0.802875 | 4.56E-49 | -1.69E-46 |
| MS.gene052052 | MS.gene23078 | 0.803309 | 3.71E-49 | -1.69E-46 |
| MS.gene052052 | MS.gene25469 | 0.821347 | 4.24E-53 | -1.69E-46 |
| MS.gene052052 | MS.gene25471 | 0.824647 | 7.21E-54 | -1.69E-46 |
| MS.gene052052 | MS.gene27006 | 0.800568 | 1.36E-48 | -1.69E-46 |
| MS.gene052052 | MS.gene29794 | 0.804258 | 2.36E-49 | -1.69E-46 |
| MS.gene052052 | MS.gene30010 | 0.809774 | 1.60E-50 | -1.69E-46 |
| MS.gene052052 | MS.gene33135 | 0.819427 | 1.17E-52 | -1.69E-46 |
| MS.gene052052 | MS.gene33177 | 0.821193 | 4.60E-53 | -1.69E-46 |
| MS.gene052052 | MS.gene33180 | 0.811276 | 7.59E-51 | -1.69E-46 |
| MS.gene052052 | MS.gene34691 | 0.806185 | 9.30E-50 | -1.69E-46 |
| MS.gene052052 | MS.gene34950 | 0.804839 | 1.78E-49 | -1.69E-46 |
| MS.gene052052 | MS.gene35264 | 0.805787 | 1.13E-49 | -1.69E-46 |
| MS.gene052052 | MS.gene35317 | 0.80906 | 2.28E-50 | -1.69E-46 |
| MS.gene052052 | MS.gene36154 | 0.806633 | 7.48E-50 | -1.69E-46 |
| MS.gene052052 | MS.gene40087 | 0.812448 | 4.22E-51 | -1.69E-46 |
| MS.gene052052 | MS.gene40093 | 0.802645 | 5.08E-49 | -1.69E-46 |
| MS.gene052052 | MS.gene40330 | 0.804829 | 1.79E-49 | -1.69E-46 |
| MS.gene052052 | MS.gene40748 | 0.802648 | 5.08E-49 | -1.69E-46 |
| MS.gene052052 | MS.gene40918 | 0.815471 | 9.09E-52 | -1.69E-46 |
| MS.gene052052 | MS.gene43202 | 0.800737 | 1.25E-48 | -1.69E-46 |
| MS.gene052052 | MS.gene43541 | 0.804039 | 2.62E-49 | -1.69E-46 |
| MS.gene052052 | MS.gene44795 | 0.800422 | 1.45E-48 | -1.69E-46 |
| MS.gene052052 | MS.gene44967 | 0.802689 | 4.98E-49 | -1.69E-46 |
| MS.gene052052 | MS.gene45281 | 0.801655 | 8.13E-49 | -1.69E-46 |
| MS.gene052052 | MS.gene45761 | 0.806717 | 7.18E-50 | -1.69E-46 |
| MS.gene052052 | MS.gene47195 | 0.803862 | 2.85E-49 | -1.69E-46 |
| MS.gene052052 | MS.gene47581 | 0.803497 | 3.39E-49 | -1.69E-46 |
| MS.gene052052 | MS.gene47822 | 0.80388 | 2.82E-49 | -1.69E-46 |
| MS.gene052052 | MS.gene47967 | 0.811211 | 7.84E-51 | -1.69E-46 |
| MS.gene052052 | MS.gene49772 | 0.827193 | 1.79E-54 | -1.69E-46 |
| MS.gene052052 | MS.gene50200 | 0.806204 | 9.21E-50 | -1.69E-46 |
| MS.gene052052 | MS.gene50464 | 0.806712 | 7.20E-50 | -1.69E-46 |
| MS.gene052052 | MS.gene51221 | 0.808875 | 2.50E-50 | -1.69E-46 |
| MS.gene052052 | MS.gene51664 | 0.80429 | 2.32E-49 | -1.69E-46 |
| MS.gene052052 | MS.gene51789 | 0.80407 | 2.58E-49 | -1.69E-46 |
| MS.gene052052 | MS.gene52437 | 0.801164 | 1.02E-48 | -1.69E-46 |
| MS.gene052052 | MS.gene52956 | 0.800671 | 1.29E-48 | -1.69E-46 |
| MS.gene052052 | MS.gene54622 | 0.80371 | 3.06E-49 | -1.69E-46 |
| MS.gene052052 | MS.gene55950 | 0.80246 | 5.55E-49 | -1.69E-46 |
| MS.gene052052 | MS.gene56300 | 0.81857 | 1.83E-52 | -1.69E-46 |
| MS.gene052052 | MS.gene60150 | 0.800758 | 1.24E-48 | -1.69E-46 |
| MS.gene052052 | MS.gene60302 | 0.804131 | 2.50E-49 | -1.69E-46 |
| MS.gene052052 | MS.gene60304 | 0.807384 | 5.19E-50 | -1.69E-46 |
| MS.gene052052 | MS.gene60566 | 0.80112 | 1.05E-48 | -1.69E-46 |
| MS.gene052052 | MS.gene61202 | 0.801568 | 8.47E-49 | -1.69E-46 |
| MS.gene052052 | MS.gene64284 | 0.805229 | 1.48E-49 | -1.69E-46 |
| MS.gene052052 | MS.gene64665 | 0.827943 | 1.18E-54 | -1.69E-46 |
| MS.gene052052 | MS.gene67412 | 0.80983 | 1.56E-50 | -1.69E-46 |
| MS.gene052052 | MS.gene67831 | 0.813835 | 2.09E-51 | -1.69E-46 |
| MS.gene052052 | MS.gene70112 | 0.825174 | 5.41E-54 | -1.69E-46 |
| MS.gene052052 | MS.gene70282 | 0.807803 | 4.23E-50 | -1.69E-46 |
| MS.gene052052 | MS.gene71828 | 0.806971 | 6.35E-50 | -1.69E-46 |
| MS.gene052052 | MS.gene73245 | 0.812508 | 4.09E-51 | -1.69E-46 |
| MS.gene052052 | MS.gene73680 | 0.818357 | 2.04E-52 | -1.69E-46 |
| MS.gene052052 | MS.gene74932 | 0.813834 | 2.09E-51 | -1.69E-46 |
| MS.gene052052 | MS.gene75412 | 0.800783 | 1.23E-48 | -1.69E-46 |
| MS.gene052052 | MS.gene75413 | 0.810667 | 1.03E-50 | -1.69E-46 |
| MS.gene052052 | MS.gene75564 | 0.823374 | 1.43E-53 | -1.69E-46 |
| MS.gene052052 | MS.gene77208 | 0.805852 | 1.09E-49 | -1.69E-46 |
| MS.gene052052 | MS.gene78230 | 0.807507 | 4.89E-50 | -1.69E-46 |
| MS.gene052052 | MS.gene79120 | 0.8155 | 8.95E-52 | -1.69E-46 |
| MS.gene052052 | MS.gene84498 | 0.821376 | 4.17E-53 | -1.69E-46 |
| MS.gene052052 | MS.gene86826 | 0.801362 | 9.33E-49 | -1.69E-46 |
| MS.gene052052 | MS.gene87358 | 0.801668 | 8.08E-49 | -1.69E-46 |
| MS.gene052052 | MS.gene90263 | 0.800461 | 1.43E-48 | -1.69E-46 |
| MS.gene052052 | MS.gene91208 | 0.807864 | 4.10E-50 | -1.69E-46 |
| MS.gene052052 | MS.gene92320 | 0.807599 | 4.67E-50 | -1.69E-46 |
| MS.gene052052 | MS.gene95204 | 0.811046 | 8.51E-51 | -1.69E-46 |
| MS.gene052052 | MS.gene95305 | 0.833381 | 5.51E-56 | -1.69E-46 |
| MS.gene052052 | MS.gene95562 | 0.802998 | 4.30E-49 | -1.69E-46 |
| MS.gene052052 | MS.gene96353 | 0.800457 | 1.43E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052052.t1 | MTR_2g098080 | 95.392 | 434 | 18 | 1 | 15 | 448 | 14 | 445 | 0.0 | 838 |
| MS.gene052052.t1 | MTR_1g098920 | 46.518 | 359 | 167 | 6 | 85 | 419 | 92 | 449 | 5.51e-94 | 291 |
| MS.gene052052.t1 | MTR_6g035315 | 45.748 | 341 | 152 | 6 | 103 | 414 | 105 | 441 | 3.79e-80 | 258 |
| MS.gene052052.t1 | MTR_7g103390 | 47.154 | 246 | 105 | 7 | 4 | 243 | 3 | 229 | 3.76e-60 | 203 |
| MS.gene052052.t1 | MTR_7g103390 | 42.222 | 90 | 52 | 0 | 325 | 414 | 349 | 438 | 6.19e-19 | 89.4 |
| MS.gene052052.t1 | MTR_1g061640 | 60.870 | 161 | 57 | 3 | 84 | 243 | 94 | 249 | 3.16e-56 | 194 |
| MS.gene052052.t1 | MTR_1g061640 | 41.441 | 111 | 61 | 1 | 310 | 416 | 371 | 481 | 3.75e-23 | 102 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052052.t1 | AT1G21200 | 40.611 | 458 | 218 | 11 | 1 | 419 | 1 | 443 | 6.26e-89 | 278 |
| MS.gene052052.t1 | AT1G21200 | 40.611 | 458 | 218 | 11 | 1 | 419 | 1 | 443 | 6.26e-89 | 278 |
| MS.gene052052.t1 | AT1G76870 | 42.363 | 347 | 168 | 8 | 84 | 419 | 60 | 385 | 4.66e-72 | 232 |
| MS.gene052052.t1 | AT1G76870 | 42.363 | 347 | 168 | 8 | 84 | 419 | 60 | 385 | 4.66e-72 | 232 |
| MS.gene052052.t1 | AT1G76870 | 42.363 | 347 | 168 | 8 | 84 | 419 | 60 | 385 | 4.66e-72 | 232 |
| MS.gene052052.t1 | AT3G10040 | 35.347 | 447 | 238 | 9 | 11 | 430 | 6 | 428 | 2.23e-69 | 227 |
Find 117 sgRNAs with CRISPR-Local
Find 141 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATGATAATAATAATCAAAT+TGG | 0.250764 | 2.2:+4566370 | MS.gene052052:CDS |
| TTCTCCCACGGTGACTTTGC+AGG | 0.254875 | 2.2:-4567234 | None:intergenic |
| TCAATTATGAATGGTTCTTC+TGG | 0.281471 | 2.2:+4566214 | None:intergenic |
| GGTTCTTCTGGTTTGGGTGG+TGG | 0.300179 | 2.2:+4566226 | MS.gene052052:CDS |
| TATGAATGGTTCTTCTGGTT+TGG | 0.302937 | 2.2:+4566219 | None:intergenic |
| ATGAATGGTTCTTCTGGTTT+GGG | 0.316755 | 2.2:+4566220 | MS.gene052052:CDS |
| GTTCTTCTGGTTTGGGTGGT+GGG | 0.328898 | 2.2:+4566227 | MS.gene052052:CDS |
| ACCAATGGAGGTAGGGTCTA+AGG | 0.337698 | 2.2:-4567493 | None:intergenic |
| AAGTCAAGATCATGACTATT+TGG | 0.349699 | 2.2:-4566961 | None:intergenic |
| GTGAGGAGGATGGCCACTTT+TGG | 0.369260 | 2.2:+4567154 | MS.gene052052:CDS |
| GGAGAAAAGAGAGTGGATTA+AGG | 0.381772 | 2.2:+4567251 | MS.gene052052:CDS |
| TATGAATATGATAACTGGTT+TGG | 0.383314 | 2.2:+4566342 | MS.gene052052:CDS |
| GGATAGGGAGCTGGAGAAGC+TGG | 0.386271 | 2.2:+4567374 | MS.gene052052:CDS |
| CAACATATGAATATGATAAC+TGG | 0.387205 | 2.2:+4566337 | MS.gene052052:CDS |
| TCCTGCATTGATGGATTCAA+TGG | 0.411710 | 2.2:+4566837 | MS.gene052052:CDS |
| ACCTTGAATCTCCATTTCAT+AGG | 0.413613 | 2.2:+4566281 | MS.gene052052:CDS |
| GAGGATGATGAGTTGGATAA+TGG | 0.423042 | 2.2:+4567066 | MS.gene052052:CDS |
| GAAGTTCAAAAGCCCTGGCT+TGG | 0.432989 | 2.2:-4567311 | None:intergenic |
| GAGCATGGTTACGGAGAAGA+TGG | 0.435266 | 2.2:+4566484 | MS.gene052052:CDS |
| GATGGTGTTAAGAAGAAATC+CGG | 0.439201 | 2.2:+4566646 | MS.gene052052:CDS |
| TCTCCCACGGTGACTTTGCA+GGG | 0.439902 | 2.2:-4567233 | None:intergenic |
| GGTTGAGAATCCTGCATTGA+TGG | 0.447920 | 2.2:+4566828 | MS.gene052052:CDS |
| ATCCGGGGTGTCACAGAAGA+AGG | 0.448557 | 2.2:+4566663 | MS.gene052052:CDS |
| GAAGACGATGAGCATGGTTA+CGG | 0.454149 | 2.2:+4566475 | MS.gene052052:CDS |
| GTGAGTTGTGTTGGTGATGA+TGG | 0.455421 | 2.2:+4566607 | MS.gene052052:CDS |
| AGTTCAATGACTTGAATAAG+AGG | 0.457023 | 2.2:+4566758 | MS.gene052052:CDS |
| GAAGAAACTTGAGAATGAAA+TGG | 0.458541 | 2.2:+4567194 | MS.gene052052:CDS |
| GATACCGCAGCAAGAAGGAT+AGG | 0.473004 | 2.2:+4567358 | MS.gene052052:CDS |
| TGACTTGCATAGTTATTCGT+TGG | 0.479428 | 2.2:+4566978 | MS.gene052052:CDS |
| TTCAGAAACAGCGGTTTAAG+TGG | 0.489001 | 2.2:+4567331 | MS.gene052052:CDS |
| ACCATTGAATCCATCAATGC+AGG | 0.492133 | 2.2:-4566838 | None:intergenic |
| TCTAAGATAATGATAAGTAA+AGG | 0.502250 | 2.2:+4566703 | MS.gene052052:CDS |
| AATTGTGTTTCAATTATGAA+TGG | 0.507262 | 2.2:+4566205 | None:intergenic |
| AATGGTTAACTTGTCTGCTA+AGG | 0.514836 | 2.2:+4566855 | MS.gene052052:CDS |
| TTGTGGCCTCTTGATACCAA+TGG | 0.514883 | 2.2:-4567508 | None:intergenic |
| GGTGATGGAGGGAGGACGGA+AGG | 0.516924 | 2.2:+4567108 | MS.gene052052:CDS |
| AATGGTTCTTCTGGTTTGGG+TGG | 0.516998 | 2.2:+4566223 | MS.gene052052:CDS |
| TCCTTAGACCCTACCTCCAT+TGG | 0.518261 | 2.2:+4567492 | MS.gene052052:CDS |
| AATATTAATGCACATGGTGA+TGG | 0.521350 | 2.2:+4567093 | MS.gene052052:CDS |
| TGTTGTTGATGCCTATGAAA+TGG | 0.522650 | 2.2:-4566292 | None:intergenic |
| CATAGTTATTCGTTGGAACA+CGG | 0.524019 | 2.2:+4566985 | MS.gene052052:CDS |
| AAAATGTTGACTTCCAAGCC+AGG | 0.526284 | 2.2:+4567298 | MS.gene052052:CDS |
| TTTCTGAAGTTCAAAAGCCC+TGG | 0.531742 | 2.2:-4567316 | None:intergenic |
| ACTTGAATAAGAGGTATAAG+AGG | 0.532660 | 2.2:+4566767 | MS.gene052052:CDS |
| GGTGATGATGGAACAATTAG+TGG | 0.532799 | 2.2:+4566619 | MS.gene052052:CDS |
| TGCAATTTGAAAATGAGCAC+AGG | 0.532921 | 2.2:+4567415 | MS.gene052052:CDS |
| TTGGTATCCTTTGACCATTG+TGG | 0.534335 | 2.2:-4566942 | None:intergenic |
| GCCTATGAAATGGAGATTCA+AGG | 0.537095 | 2.2:-4566282 | None:intergenic |
| GGTTGAATGAGATACTTGGT+AGG | 0.537365 | 2.2:+4566788 | MS.gene052052:CDS |
| CAATAGACTGCGGCCAAAAG+TGG | 0.539749 | 2.2:-4567167 | None:intergenic |
| CAGCAAGAAGGATAGGGAGC+TGG | 0.539921 | 2.2:+4567365 | MS.gene052052:CDS |
| AACTTATCCTCACACTGTTG+CGG | 0.547470 | 2.2:-4566739 | None:intergenic |
| ATTAATGCACATGGTGATGG+AGG | 0.547565 | 2.2:+4567096 | MS.gene052052:CDS |
| TAACTTGTCTGCTAAGGCTA+AGG | 0.548373 | 2.2:+4566861 | MS.gene052052:CDS |
| TGAAGATAACAATGAAAGTG+AGG | 0.549731 | 2.2:+4567047 | MS.gene052052:CDS |
| ATAGCAGTGGTGAGTTGTGT+TGG | 0.551265 | 2.2:+4566598 | MS.gene052052:CDS |
| GTTGAATGAGATACTTGGTA+GGG | 0.553194 | 2.2:+4566789 | MS.gene052052:CDS |
| TTATTCGTTGGAACACGGGA+AGG | 0.556233 | 2.2:+4566990 | MS.gene052052:CDS |
| TGAAAGTGAGGATGATGAGT+TGG | 0.557152 | 2.2:+4567059 | MS.gene052052:CDS |
| AACTTGAGAATGAAATGGCA+AGG | 0.559083 | 2.2:+4567199 | MS.gene052052:CDS |
| TATCAAGAGGCCACAAGGGA+GGG | 0.560647 | 2.2:+4567515 | MS.gene052052:CDS |
| TATTCGTTGGAACACGGGAA+GGG | 0.562579 | 2.2:+4566991 | MS.gene052052:CDS |
| ATACCGCAGCAAGAAGGATA+GGG | 0.564239 | 2.2:+4567359 | MS.gene052052:CDS |
| AAAGCTGAAGCAGAGAGAGC+AGG | 0.565355 | 2.2:+4567443 | MS.gene052052:CDS |
| TTGATATGTTCCCTCCCTTG+TGG | 0.565958 | 2.2:-4567525 | None:intergenic |
| GTCCACTTCATTCTCTGCCA+AGG | 0.566514 | 2.2:-4566553 | None:intergenic |
| TGTCACAGAAGAAGGGTAAG+TGG | 0.569426 | 2.2:+4566671 | MS.gene052052:CDS |
| TCTTGATACCAATGGAGGTA+GGG | 0.573392 | 2.2:-4567500 | None:intergenic |
| AAGAGGTTGAATGAGATACT+TGG | 0.573494 | 2.2:+4566784 | MS.gene052052:CDS |
| GGAGCTGGAGAAGCTGGCGA+TGG | 0.574129 | 2.2:+4567380 | MS.gene052052:CDS |
| AGCAGGAGGCAGAGTTCAGT+AGG | 0.578594 | 2.2:+4567460 | MS.gene052052:CDS |
| CAACAGACTCAGTTAGCTCA+TGG | 0.578956 | 2.2:+4566310 | MS.gene052052:CDS |
| ATGGTGTTAAGAAGAAATCC+GGG | 0.579854 | 2.2:+4566647 | MS.gene052052:CDS |
| CTCTTGATACCAATGGAGGT+AGG | 0.581041 | 2.2:-4567501 | None:intergenic |
| ACTTGAGAATGAAATGGCAA+GGG | 0.583894 | 2.2:+4567200 | MS.gene052052:CDS |
| TAGAAATAAATTAAGTGAGG+AGG | 0.587853 | 2.2:+4567140 | MS.gene052052:CDS |
| ACCCTTCTTCTGTGACACCC+CGG | 0.588573 | 2.2:-4566665 | None:intergenic |
| TGATAGAAATAAATTAAGTG+AGG | 0.588915 | 2.2:+4567137 | MS.gene052052:CDS |
| GTTAAGATACCGCAGCAAGA+AGG | 0.589509 | 2.2:+4567353 | MS.gene052052:CDS |
| AAATGTTGACTTCCAAGCCA+GGG | 0.593930 | 2.2:+4567299 | MS.gene052052:CDS |
| GTGATGGAGGGAGGACGGAA+GGG | 0.596271 | 2.2:+4567109 | MS.gene052052:CDS |
| ATAGTTATTCGTTGGAACAC+GGG | 0.600371 | 2.2:+4566986 | MS.gene052052:CDS |
| TTGAATGAGATACTTGGTAG+GGG | 0.601302 | 2.2:+4566790 | MS.gene052052:CDS |
| TAGGGGAACTTGTTGTCAAG+TGG | 0.602890 | 2.2:+4566807 | MS.gene052052:CDS |
| GTGCATACCACAATGGTCAA+AGG | 0.603169 | 2.2:+4566935 | MS.gene052052:CDS |
| TGATGGAACAATTAGTGGTG+TGG | 0.604354 | 2.2:+4566624 | MS.gene052052:CDS |
| AGTGGACGGATAATGTGGTT+GGG | 0.610749 | 2.2:+4566569 | MS.gene052052:CDS |
| AAGTGGACGGATAATGTGGT+TGG | 0.613391 | 2.2:+4566568 | MS.gene052052:CDS |
| ACATGGTGATGGAGGGAGGA+CGG | 0.614746 | 2.2:+4567104 | MS.gene052052:CDS |
| GTATCAAGAGGCCACAAGGG+AGG | 0.615865 | 2.2:+4567514 | MS.gene052052:CDS |
| CTACCTCCATTGGTATCAAG+AGG | 0.620308 | 2.2:+4567502 | MS.gene052052:CDS |
| AGCATGGTTACGGAGAAGAT+GGG | 0.623013 | 2.2:+4566485 | MS.gene052052:CDS |
| GGAACAATTAGTGGTGTGGA+TGG | 0.625621 | 2.2:+4566628 | MS.gene052052:CDS |
| TTAATGCACATGGTGATGGA+GGG | 0.625757 | 2.2:+4567097 | MS.gene052052:CDS |
| AATAAATTAAGTGAGGAGGA+TGG | 0.626359 | 2.2:+4567144 | MS.gene052052:CDS |
| ATGCACATGGTGATGGAGGG+AGG | 0.628145 | 2.2:+4567100 | MS.gene052052:CDS |
| AATGAAGTGGACGGATAATG+TGG | 0.631463 | 2.2:+4566564 | MS.gene052052:CDS |
| AGGGAGGGAACATATCAACT+TGG | 0.631664 | 2.2:+4567530 | MS.gene052052:CDS |
| CTCCTTGGCAGAGAATGAAG+TGG | 0.631774 | 2.2:+4566551 | MS.gene052052:CDS |
| GCTCCCTATCCTTCTTGCTG+CGG | 0.632768 | 2.2:-4567362 | None:intergenic |
| TGTGTCGCCGCAACAGTGTG+AGG | 0.632897 | 2.2:+4566732 | MS.gene052052:CDS |
| GGTTGGGCTTCTTATAGCAG+TGG | 0.632989 | 2.2:+4566585 | MS.gene052052:CDS |
| ATTGGTATCAAGAGGCCACA+AGG | 0.633070 | 2.2:+4567510 | MS.gene052052:CDS |
| GGAATTAATATTAATGCACA+TGG | 0.634314 | 2.2:+4567087 | MS.gene052052:CDS |
| GCTGAAGCAGAGAGAGCAGG+AGG | 0.642379 | 2.2:+4567446 | MS.gene052052:CDS |
| ATGAGCGAAGACGATGAGCA+TGG | 0.644222 | 2.2:+4566469 | MS.gene052052:CDS |
| TTGGCAGAGAATGAAGTGGA+CGG | 0.645694 | 2.2:+4566555 | MS.gene052052:CDS |
| CACCGTGGGAGAAAAGAGAG+TGG | 0.647688 | 2.2:+4567244 | MS.gene052052:CDS |
| TGGCCTCTTGATACCAATGG+AGG | 0.649145 | 2.2:-4567505 | None:intergenic |
| TCCGGGGTGTCACAGAAGAA+GGG | 0.653871 | 2.2:+4566664 | MS.gene052052:CDS |
| AGACCCTGCAAAGTCACCGT+GGG | 0.657508 | 2.2:+4567230 | MS.gene052052:CDS |
| TTCTTCATCCCAATAGACTG+CGG | 0.669328 | 2.2:-4567177 | None:intergenic |
| TTGGTATCAAGAGGCCACAA+GGG | 0.674612 | 2.2:+4567511 | MS.gene052052:CDS |
| GAAATGTGTGCATACCACAA+TGG | 0.692151 | 2.2:+4566928 | MS.gene052052:CDS |
| AAGACCCTGCAAAGTCACCG+TGG | 0.699063 | 2.2:+4567229 | MS.gene052052:CDS |
| TGGTGTTAAGAAGAAATCCG+GGG | 0.737936 | 2.2:+4566648 | MS.gene052052:CDS |
| AAGGGCTCGAGAGATCACAA+TGG | 0.773394 | 2.2:+4567009 | MS.gene052052:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GATGATAATAATAATCAAAT+TGG | + | chr2.2:4566370-4566389 | MS.gene052052:CDS | 15.0% |
| !!! | AAAAATTTGAATTTTGGTAA+AGG | + | chr2.2:4566406-4566425 | MS.gene052052:CDS | 15.0% |
| !! | TGATAGAAATAAATTAAGTG+AGG | + | chr2.2:4567137-4567156 | MS.gene052052:CDS | 20.0% |
| !!! | CTCAAAACATTTGTTTTATA+AGG | + | chr2.2:4566906-4566925 | MS.gene052052:CDS | 20.0% |
| !!! | GAAGTGAAAAATTTGAATTT+TGG | + | chr2.2:4566400-4566419 | MS.gene052052:CDS | 20.0% |
| !!! | TCTAAGATAATGATAAGTAA+AGG | + | chr2.2:4566703-4566722 | MS.gene052052:CDS | 20.0% |
| ! | CAACATATGAATATGATAAC+TGG | + | chr2.2:4566337-4566356 | MS.gene052052:CDS | 25.0% |
| ! | GGAATTAATATTAATGCACA+TGG | + | chr2.2:4567087-4567106 | MS.gene052052:CDS | 25.0% |
| ! | TAGAAATAAATTAAGTGAGG+AGG | + | chr2.2:4567140-4567159 | MS.gene052052:CDS | 25.0% |
| ! | TATGAATATGATAACTGGTT+TGG | + | chr2.2:4566342-4566361 | MS.gene052052:CDS | 25.0% |
| !!! | TTGAATTTTGGTAAAGGAAA+GGG | + | chr2.2:4566412-4566431 | MS.gene052052:CDS | 25.0% |
| !!! | TTTGAATTTTGGTAAAGGAA+AGG | + | chr2.2:4566411-4566430 | MS.gene052052:CDS | 25.0% |
| AAGTCAAGATCATGACTATT+TGG | - | chr2.2:4566964-4566983 | None:intergenic | 30.0% | |
| AATAAATTAAGTGAGGAGGA+TGG | + | chr2.2:4567144-4567163 | MS.gene052052:CDS | 30.0% | |
| AATATTAATGCACATGGTGA+TGG | + | chr2.2:4567093-4567112 | MS.gene052052:CDS | 30.0% | |
| AGTTCAATGACTTGAATAAG+AGG | + | chr2.2:4566758-4566777 | MS.gene052052:CDS | 30.0% | |
| GAAGAAACTTGAGAATGAAA+TGG | + | chr2.2:4567194-4567213 | MS.gene052052:CDS | 30.0% | |
| TGAAGATAACAATGAAAGTG+AGG | + | chr2.2:4567047-4567066 | MS.gene052052:CDS | 30.0% | |
| ! | ACTTGAATAAGAGGTATAAG+AGG | + | chr2.2:4566767-4566786 | MS.gene052052:CDS | 30.0% |
| !!! | AATTGCGAGAATTTTTTCGA+TGG | + | chr2.2:4566508-4566527 | MS.gene052052:CDS | 30.0% |
| AACTTGAGAATGAAATGGCA+AGG | + | chr2.2:4567199-4567218 | MS.gene052052:CDS | 35.0% | |
| AAGAGGTTGAATGAGATACT+TGG | + | chr2.2:4566784-4566803 | MS.gene052052:CDS | 35.0% | |
| ACCTTGAATCTCCATTTCAT+AGG | + | chr2.2:4566281-4566300 | MS.gene052052:CDS | 35.0% | |
| ACTTGAGAATGAAATGGCAA+GGG | + | chr2.2:4567200-4567219 | MS.gene052052:CDS | 35.0% | |
| ATAGTTATTCGTTGGAACAC+GGG | + | chr2.2:4566986-4567005 | MS.gene052052:CDS | 35.0% | |
| CATAGTTATTCGTTGGAACA+CGG | + | chr2.2:4566985-4567004 | MS.gene052052:CDS | 35.0% | |
| GTTGAATGAGATACTTGGTA+GGG | + | chr2.2:4566789-4566808 | MS.gene052052:CDS | 35.0% | |
| TGCAATTTGAAAATGAGCAC+AGG | + | chr2.2:4567415-4567434 | MS.gene052052:CDS | 35.0% | |
| TGTTGTTGATGCCTATGAAA+TGG | - | chr2.2:4566295-4566314 | None:intergenic | 35.0% | |
| TTGAATGAGATACTTGGTAG+GGG | + | chr2.2:4566790-4566809 | MS.gene052052:CDS | 35.0% | |
| ! | ATGGTGTTAAGAAGAAATCC+GGG | + | chr2.2:4566647-4566666 | MS.gene052052:CDS | 35.0% |
| ! | CTTTTGAACTTCAGAAACAG+CGG | + | chr2.2:4567322-4567341 | MS.gene052052:CDS | 35.0% |
| ! | GATGGTGTTAAGAAGAAATC+CGG | + | chr2.2:4566646-4566665 | MS.gene052052:CDS | 35.0% |
| ! | TGACTTGCATAGTTATTCGT+TGG | + | chr2.2:4566978-4566997 | MS.gene052052:CDS | 35.0% |
| !! | AATGGTTAACTTGTCTGCTA+AGG | + | chr2.2:4566855-4566874 | MS.gene052052:CDS | 35.0% |
| !! | ATGAATGGTTCTTCTGGTTT+GGG | + | chr2.2:4566220-4566239 | MS.gene052052:CDS | 35.0% |
| !!! | AATTTTTTCGATGGTGGGAA+GGG | + | chr2.2:4566517-4566536 | MS.gene052052:CDS | 35.0% |
| AACTTATCCTCACACTGTTG+CGG | - | chr2.2:4566742-4566761 | None:intergenic | 40.0% | |
| AATGAAGTGGACGGATAATG+TGG | + | chr2.2:4566564-4566583 | MS.gene052052:CDS | 40.0% | |
| ACCATTGAATCCATCAATGC+AGG | - | chr2.2:4566841-4566860 | None:intergenic | 40.0% | |
| GAAATGTGTGCATACCACAA+TGG | + | chr2.2:4566928-4566947 | MS.gene052052:CDS | 40.0% | |
| GCCTATGAAATGGAGATTCA+AGG | - | chr2.2:4566285-4566304 | None:intergenic | 40.0% | |
| GGTTGAATGAGATACTTGGT+AGG | + | chr2.2:4566788-4566807 | MS.gene052052:CDS | 40.0% | |
| TCTTGATACCAATGGAGGTA+GGG | - | chr2.2:4567503-4567522 | None:intergenic | 40.0% | |
| TGAAAGTGAGGATGATGAGT+TGG | + | chr2.2:4567059-4567078 | MS.gene052052:CDS | 40.0% | |
| TGATGGAACAATTAGTGGTG+TGG | + | chr2.2:4566624-4566643 | MS.gene052052:CDS | 40.0% | |
| TTCAGAAACAGCGGTTTAAG+TGG | + | chr2.2:4567331-4567350 | MS.gene052052:CDS | 40.0% | |
| TTCTTCATCCCAATAGACTG+CGG | - | chr2.2:4567180-4567199 | None:intergenic | 40.0% | |
| TTGGTATCCTTTGACCATTG+TGG | - | chr2.2:4566945-4566964 | None:intergenic | 40.0% | |
| ! | GAGGATGATGAGTTGGATAA+TGG | + | chr2.2:4567066-4567085 | MS.gene052052:CDS | 40.0% |
| ! | GGAAGTCAACATTTTGCTCT+TGG | - | chr2.2:4567293-4567312 | None:intergenic | 40.0% |
| ! | TAACTTGTCTGCTAAGGCTA+AGG | + | chr2.2:4566861-4566880 | MS.gene052052:CDS | 40.0% |
| ! | TGGTGTTAAGAAGAAATCCG+GGG | + | chr2.2:4566648-4566667 | MS.gene052052:CDS | 40.0% |
| !! | AAAATGTTGACTTCCAAGCC+AGG | + | chr2.2:4567298-4567317 | MS.gene052052:CDS | 40.0% |
| !! | AAATGTTGACTTCCAAGCCA+GGG | + | chr2.2:4567299-4567318 | MS.gene052052:CDS | 40.0% |
| !! | ATTAATGCACATGGTGATGG+AGG | + | chr2.2:4567096-4567115 | MS.gene052052:CDS | 40.0% |
| !! | GGAGAAAAGAGAGTGGATTA+AGG | + | chr2.2:4567251-4567270 | MS.gene052052:CDS | 40.0% |
| !! | GGTGATGATGGAACAATTAG+TGG | + | chr2.2:4566619-4566638 | MS.gene052052:CDS | 40.0% |
| !! | TCCTGCATTGATGGATTCAA+TGG | + | chr2.2:4566837-4566856 | MS.gene052052:CDS | 40.0% |
| !! | TTAATGCACATGGTGATGGA+GGG | + | chr2.2:4567097-4567116 | MS.gene052052:CDS | 40.0% |
| !! | TTTCTGAAGTTCAAAAGCCC+TGG | - | chr2.2:4567319-4567338 | None:intergenic | 40.0% |
| !!! | ATTTTTTCGATGGTGGGAAG+GGG | + | chr2.2:4566518-4566537 | MS.gene052052:CDS | 40.0% |
| !!! | GAATTTTTTCGATGGTGGGA+AGG | + | chr2.2:4566516-4566535 | MS.gene052052:CDS | 40.0% |
| !!! | GCGAGAATTTTTTCGATGGT+GGG | + | chr2.2:4566512-4566531 | MS.gene052052:CDS | 40.0% |
| !!! | TGCGAGAATTTTTTCGATGG+TGG | + | chr2.2:4566511-4566530 | MS.gene052052:CDS | 40.0% |
| AAGTGGACGGATAATGTGGT+TGG | + | chr2.2:4566568-4566587 | MS.gene052052:CDS | 45.0% | |
| AGCATGGTTACGGAGAAGAT+GGG | + | chr2.2:4566485-4566504 | MS.gene052052:CDS | 45.0% | |
| AGGGAGGGAACATATCAACT+TGG | + | chr2.2:4567530-4567549 | MS.gene052052:CDS | 45.0% | |
| AGTGGACGGATAATGTGGTT+GGG | + | chr2.2:4566569-4566588 | MS.gene052052:CDS | 45.0% | |
| ATACCGCAGCAAGAAGGATA+GGG | + | chr2.2:4567359-4567378 | MS.gene052052:CDS | 45.0% | |
| ATAGCAGTGGTGAGTTGTGT+TGG | + | chr2.2:4566598-4566617 | MS.gene052052:CDS | 45.0% | |
| ATTGGTATCAAGAGGCCACA+AGG | + | chr2.2:4567510-4567529 | MS.gene052052:CDS | 45.0% | |
| CAACAGACTCAGTTAGCTCA+TGG | + | chr2.2:4566310-4566329 | MS.gene052052:CDS | 45.0% | |
| CTACCTCCATTGGTATCAAG+AGG | + | chr2.2:4567502-4567521 | MS.gene052052:CDS | 45.0% | |
| CTCTTGATACCAATGGAGGT+AGG | - | chr2.2:4567504-4567523 | None:intergenic | 45.0% | |
| GAAGACGATGAGCATGGTTA+CGG | + | chr2.2:4566475-4566494 | MS.gene052052:CDS | 45.0% | |
| GGAACAATTAGTGGTGTGGA+TGG | + | chr2.2:4566628-4566647 | MS.gene052052:CDS | 45.0% | |
| GGTTGAGAATCCTGCATTGA+TGG | + | chr2.2:4566828-4566847 | MS.gene052052:CDS | 45.0% | |
| GTGCATACCACAATGGTCAA+AGG | + | chr2.2:4566935-4566954 | MS.gene052052:CDS | 45.0% | |
| GTTAAGATACCGCAGCAAGA+AGG | + | chr2.2:4567353-4567372 | MS.gene052052:CDS | 45.0% | |
| TATTCGTTGGAACACGGGAA+GGG | + | chr2.2:4566991-4567010 | MS.gene052052:CDS | 45.0% | |
| TGTCACAGAAGAAGGGTAAG+TGG | + | chr2.2:4566671-4566690 | MS.gene052052:CDS | 45.0% | |
| TTATTCGTTGGAACACGGGA+AGG | + | chr2.2:4566990-4567009 | MS.gene052052:CDS | 45.0% | |
| TTGATATGTTCCCTCCCTTG+TGG | - | chr2.2:4567528-4567547 | None:intergenic | 45.0% | |
| TTGGCAGAGAATGAAGTGGA+CGG | + | chr2.2:4566555-4566574 | MS.gene052052:CDS | 45.0% | |
| TTGGTATCAAGAGGCCACAA+GGG | + | chr2.2:4567511-4567530 | MS.gene052052:CDS | 45.0% | |
| TTGTGGCCTCTTGATACCAA+TGG | - | chr2.2:4567511-4567530 | None:intergenic | 45.0% | |
| ! | ACTTTTGGCCGCAGTCTATT+GGG | + | chr2.2:4567169-4567188 | MS.gene052052:CDS | 45.0% |
| ! | ATCCACTCTCTTTTCTCCCA+CGG | - | chr2.2:4567249-4567268 | None:intergenic | 45.0% |
| ! | ATGGTGGGAAGGGGAAAAAA+GGG | + | chr2.2:4566527-4566546 | MS.gene052052:CDS | 45.0% |
| !! | AATGGTTCTTCTGGTTTGGG+TGG | + | chr2.2:4566223-4566242 | MS.gene052052:CDS | 45.0% |
| !! | GTGAGTTGTGTTGGTGATGA+TGG | + | chr2.2:4566607-4566626 | MS.gene052052:CDS | 45.0% |
| !! | TAGGGGAACTTGTTGTCAAG+TGG | + | chr2.2:4566807-4566826 | MS.gene052052:CDS | 45.0% |
| AAAGCTGAAGCAGAGAGAGC+AGG | + | chr2.2:4567443-4567462 | MS.gene052052:CDS | 50.0% | |
| AAGGGCTCGAGAGATCACAA+TGG | + | chr2.2:4567009-4567028 | MS.gene052052:CDS | 50.0% | |
| AAGGTCCAAAATACCCCCAG+CGG | - | chr2.2:4566266-4566285 | None:intergenic | 50.0% | |
| ACCAATGGAGGTAGGGTCTA+AGG | - | chr2.2:4567496-4567515 | None:intergenic | 50.0% | |
| AGGGGAAAAAAGGGTCTCCT+TGG | + | chr2.2:4566536-4566555 | MS.gene052052:CDS | 50.0% | |
| ATGAGCGAAGACGATGAGCA+TGG | + | chr2.2:4566469-4566488 | MS.gene052052:CDS | 50.0% | |
| CAATAGACTGCGGCCAAAAG+TGG | - | chr2.2:4567170-4567189 | None:intergenic | 50.0% | |
| CTCCTTGGCAGAGAATGAAG+TGG | + | chr2.2:4566551-4566570 | MS.gene052052:CDS | 50.0% | |
| GAAGTTCAAAAGCCCTGGCT+TGG | - | chr2.2:4567314-4567333 | None:intergenic | 50.0% | |
| GAGCATGGTTACGGAGAAGA+TGG | + | chr2.2:4566484-4566503 | MS.gene052052:CDS | 50.0% | |
| GATACCGCAGCAAGAAGGAT+AGG | + | chr2.2:4567358-4567377 | MS.gene052052:CDS | 50.0% | |
| GGTTGGGCTTCTTATAGCAG+TGG | + | chr2.2:4566585-4566604 | MS.gene052052:CDS | 50.0% | |
| GTCCACTTCATTCTCTGCCA+AGG | - | chr2.2:4566556-4566575 | None:intergenic | 50.0% | |
| TATCAAGAGGCCACAAGGGA+GGG | + | chr2.2:4567515-4567534 | MS.gene052052:CDS | 50.0% | |
| TCCTTAGACCCTACCTCCAT+TGG | + | chr2.2:4567492-4567511 | MS.gene052052:CDS | 50.0% | |
| TGGCCTCTTGATACCAATGG+AGG | - | chr2.2:4567508-4567527 | None:intergenic | 50.0% | |
| ! | CACTTTTGGCCGCAGTCTAT+TGG | + | chr2.2:4567168-4567187 | MS.gene052052:CDS | 50.0% |
| !! | GATGGTGGGAAGGGGAAAAA+AGG | + | chr2.2:4566526-4566545 | MS.gene052052:CDS | 50.0% |
| !! | GTTCTTCTGGTTTGGGTGGT+GGG | + | chr2.2:4566227-4566246 | MS.gene052052:CDS | 50.0% |
| !!! | TTGGGTGGTGGGTTTTTGAG+TGG | + | chr2.2:4566238-4566257 | MS.gene052052:CDS | 50.0% |
| AAGACCCTGCAAAGTCACCG+TGG | + | chr2.2:4567229-4567248 | MS.gene052052:CDS | 55.0% | |
| ACCCTTCTTCTGTGACACCC+CGG | - | chr2.2:4566668-4566687 | None:intergenic | 55.0% | |
| AGACCCTGCAAAGTCACCGT+GGG | + | chr2.2:4567230-4567249 | MS.gene052052:CDS | 55.0% | |
| AGCAGGAGGCAGAGTTCAGT+AGG | + | chr2.2:4567460-4567479 | MS.gene052052:CDS | 55.0% | |
| AGGTCCAAAATACCCCCAGC+GGG | - | chr2.2:4566265-4566284 | None:intergenic | 55.0% | |
| CACCGTGGGAGAAAAGAGAG+TGG | + | chr2.2:4567244-4567263 | MS.gene052052:CDS | 55.0% | |
| CAGCAAGAAGGATAGGGAGC+TGG | + | chr2.2:4567365-4567384 | MS.gene052052:CDS | 55.0% | |
| GCTCCCTATCCTTCTTGCTG+CGG | - | chr2.2:4567365-4567384 | None:intergenic | 55.0% | |
| GTATCAAGAGGCCACAAGGG+AGG | + | chr2.2:4567514-4567533 | MS.gene052052:CDS | 55.0% | |
| TCTCCCACGGTGACTTTGCA+GGG | - | chr2.2:4567236-4567255 | None:intergenic | 55.0% | |
| TTCTCCCACGGTGACTTTGC+AGG | - | chr2.2:4567237-4567256 | None:intergenic | 55.0% | |
| ! | ATCCGGGGTGTCACAGAAGA+AGG | + | chr2.2:4566663-4566682 | MS.gene052052:CDS | 55.0% |
| ! | TCCGGGGTGTCACAGAAGAA+GGG | + | chr2.2:4566664-4566683 | MS.gene052052:CDS | 55.0% |
| !! | ACATGGTGATGGAGGGAGGA+CGG | + | chr2.2:4567104-4567123 | MS.gene052052:CDS | 55.0% |
| !! | ATGCACATGGTGATGGAGGG+AGG | + | chr2.2:4567100-4567119 | MS.gene052052:CDS | 55.0% |
| !! | GGTTCTTCTGGTTTGGGTGG+TGG | + | chr2.2:4566226-4566245 | MS.gene052052:CDS | 55.0% |
| !! | GTGAGGAGGATGGCCACTTT+TGG | + | chr2.2:4567154-4567173 | MS.gene052052:CDS | 55.0% |
| !!! | GGTTTTTGAGTGGTCCCGCT+GGG | + | chr2.2:4566248-4566267 | MS.gene052052:CDS | 55.0% |
| !!! | GTTTTTGAGTGGTCCCGCTG+GGG | + | chr2.2:4566249-4566268 | MS.gene052052:CDS | 55.0% |
| !!! | TTTTTGAGTGGTCCCGCTGG+GGG | + | chr2.2:4566250-4566269 | MS.gene052052:CDS | 55.0% |
| GCTGAAGCAGAGAGAGCAGG+AGG | + | chr2.2:4567446-4567465 | MS.gene052052:CDS | 60.0% | |
| GGATAGGGAGCTGGAGAAGC+TGG | + | chr2.2:4567374-4567393 | MS.gene052052:CDS | 60.0% | |
| TGTGTCGCCGCAACAGTGTG+AGG | + | chr2.2:4566732-4566751 | MS.gene052052:CDS | 60.0% | |
| ! | GTGATGGAGGGAGGACGGAA+GGG | + | chr2.2:4567109-4567128 | MS.gene052052:CDS | 60.0% |
| !!! | GGGTTTTTGAGTGGTCCCGC+TGG | + | chr2.2:4566247-4566266 | MS.gene052052:CDS | 60.0% |
| !!! | TGGTCCCGCTGGGGGTATTT+TGG | + | chr2.2:4566258-4566277 | MS.gene052052:CDS | 60.0% |
| GGAGCTGGAGAAGCTGGCGA+TGG | + | chr2.2:4567380-4567399 | MS.gene052052:CDS | 65.0% | |
| !! | GGTGATGGAGGGAGGACGGA+AGG | + | chr2.2:4567108-4567127 | MS.gene052052:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.2 | gene | 4566220 | 4567566 | 4566220 | ID=MS.gene052052 |
| chr2.2 | mRNA | 4566220 | 4567566 | 4566220 | ID=MS.gene052052.t1;Parent=MS.gene052052 |
| chr2.2 | exon | 4566220 | 4567566 | 4566220 | ID=MS.gene052052.t1.exon1;Parent=MS.gene052052.t1 |
| chr2.2 | CDS | 4566220 | 4567566 | 4566220 | ID=cds.MS.gene052052.t1;Parent=MS.gene052052.t1 |
| Gene Sequence |
| Protein sequence |
