Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049376.t1 | XP_003602457.1 | 97.9 | 233 | 5 | 0 | 1 | 233 | 1 | 233 | 2.70E-122 | 448 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049376.t1 | P34091 | 80.2 | 232 | 46 | 0 | 2 | 233 | 3 | 234 | 1.9e-100 | 366.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049376.t1 | G7J9R6 | 97.9 | 233 | 5 | 0 | 1 | 233 | 1 | 233 | 2.0e-122 | 448.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049306 | MS.gene049376 | 0.880042 | 7.60E-70 | -1.69E-46 |
| MS.gene049376 | MS.gene051925 | 0.816114 | 6.53E-52 | -1.69E-46 |
| MS.gene049376 | MS.gene051927 | 0.820287 | 7.43E-53 | -1.69E-46 |
| MS.gene049376 | MS.gene057321 | 0.81419 | 1.75E-51 | -1.69E-46 |
| MS.gene049376 | MS.gene06433 | 0.880775 | 4.16E-70 | -1.69E-46 |
| MS.gene049376 | MS.gene066830 | 0.843418 | 1.42E-58 | -1.69E-46 |
| MS.gene049376 | MS.gene06999 | 0.826797 | 2.23E-54 | -1.69E-46 |
| MS.gene049376 | MS.gene074400 | 0.83097 | 2.18E-55 | -1.69E-46 |
| MS.gene049376 | MS.gene25240 | 0.82765 | 1.39E-54 | -1.69E-46 |
| MS.gene049376 | MS.gene25649 | 0.82425 | 8.93E-54 | -1.69E-46 |
| MS.gene049376 | MS.gene26792 | 0.81574 | 7.92E-52 | -1.69E-46 |
| MS.gene049376 | MS.gene30895 | 0.860898 | 1.50E-63 | -1.69E-46 |
| MS.gene049376 | MS.gene30990 | 0.878022 | 3.93E-69 | -1.69E-46 |
| MS.gene049376 | MS.gene40321 | 0.802064 | 6.70E-49 | -1.69E-46 |
| MS.gene049376 | MS.gene75309 | 0.813777 | 2.16E-51 | -1.69E-46 |
| MS.gene049376 | MS.gene75598 | 0.845695 | 3.46E-59 | -1.69E-46 |
| MS.gene049376 | MS.gene80889 | 0.859785 | 3.25E-63 | -1.69E-46 |
| MS.gene049376 | MS.gene95889 | 0.84318 | 1.64E-58 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene049376 | MS.gene042025 | PPI |
| MS.gene049376 | MS.gene041557 | PPI |
| MS.gene049376 | MS.gene06501 | PPI |
| MS.gene049376 | MS.gene70551 | PPI |
| MS.gene049376 | MS.gene70316 | PPI |
| MS.gene049376 | MS.gene036487 | PPI |
| MS.gene049376 | MS.gene81197 | PPI |
| MS.gene049376 | MS.gene035331 | PPI |
| MS.gene049376 | MS.gene42910 | PPI |
| MS.gene049376 | MS.gene06481 | PPI |
| MS.gene049376 | MS.gene27648 | PPI |
| MS.gene049376 | MS.gene047734 | PPI |
| MS.gene049376 | MS.gene030719 | PPI |
| MS.gene049376 | MS.gene73008 | PPI |
| MS.gene049376 | MS.gene58173 | PPI |
| MS.gene049376 | MS.gene067072 | PPI |
| MS.gene049376 | MS.gene59319 | PPI |
| MS.gene049376 | MS.gene023799 | PPI |
| MS.gene049376 | MS.gene52173 | PPI |
| MS.gene049376 | MS.gene75537 | PPI |
| MS.gene049376 | MS.gene28147 | PPI |
| MS.gene049376 | MS.gene010453 | PPI |
| MS.gene049376 | MS.gene42236 | PPI |
| MS.gene049376 | MS.gene31039 | PPI |
| MS.gene049376 | MS.gene013401 | PPI |
| MS.gene049376 | MS.gene31056 | PPI |
| MS.gene049376 | MS.gene045180 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049376.t1 | MTR_3g094570 | 97.854 | 233 | 5 | 0 | 1 | 233 | 1 | 233 | 4.34e-167 | 460 |
| MS.gene049376.t1 | MTR_3g094860 | 96.996 | 233 | 7 | 0 | 1 | 233 | 1 | 233 | 4.12e-165 | 455 |
| MS.gene049376.t1 | MTR_5g098090 | 85.470 | 234 | 33 | 1 | 1 | 233 | 1 | 234 | 2.03e-142 | 398 |
| MS.gene049376.t1 | MTR_8g091910 | 82.051 | 234 | 26 | 2 | 1 | 233 | 1 | 219 | 2.47e-133 | 374 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049376.t1 | AT1G74060 | 78.970 | 233 | 49 | 0 | 1 | 233 | 1 | 233 | 4.04e-120 | 341 |
| MS.gene049376.t1 | AT1G74050 | 78.970 | 233 | 49 | 0 | 1 | 233 | 1 | 233 | 8.41e-120 | 340 |
| MS.gene049376.t1 | AT1G18540 | 76.824 | 233 | 54 | 0 | 1 | 233 | 1 | 233 | 3.24e-112 | 321 |
Find 77 sgRNAs with CRISPR-Local
Find 283 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTCTTGCCGGAAGATTTA+AGG | 0.144333 | 3.1:-75499197 | MS.gene049376:CDS |
| GGCTTCTCGGCGGGAGTTGC+AGG | 0.175419 | 3.1:+75500847 | None:intergenic |
| CCGATACCCCTGATCAATTC+AGG | 0.224276 | 3.1:+75500967 | None:intergenic |
| TTTCTCAAGCAGCTTCCTTC+TGG | 0.237735 | 3.1:-75499160 | MS.gene049376:CDS |
| TTTGATCATCCTTCTTCTCT+TGG | 0.241206 | 3.1:+75497563 | None:intergenic |
| TTGATCATCCTTCTTCTCTT+GGG | 0.285928 | 3.1:+75497564 | None:intergenic |
| TCAGGTCCATTCAAGATAAA+TGG | 0.287350 | 3.1:-75497864 | MS.gene049376:intron |
| TACTCTTGCAGTTCTTTGCT+TGG | 0.312751 | 3.1:+75500999 | None:intergenic |
| TCTGGACTTCTTCTCGTTAC+CGG | 0.334203 | 3.1:-75499142 | MS.gene049376:intron |
| ACCACCGTGCTTGGCTTTGA+TGG | 0.340487 | 3.1:+75500900 | None:intergenic |
| TCTCTTTCCCTTAAATCTTC+CGG | 0.346788 | 3.1:+75499189 | None:intergenic |
| TGTACCACAAGCGTGGGATC+TGG | 0.347182 | 3.1:-75500924 | MS.gene049376:CDS |
| CCCATTGAGACGTGTGAATC+AGG | 0.352065 | 3.1:-75497838 | MS.gene049376:CDS |
| AACCTGAGCTTAGTGGGCTT+TGG | 0.360630 | 3.1:+75500769 | None:intergenic |
| CTTCTTGCCGGAAGATTTAA+GGG | 0.369942 | 3.1:-75499196 | MS.gene049376:CDS |
| CGAGTTCTTTGAGGCAGATA+AGG | 0.375748 | 3.1:-75497703 | MS.gene049376:CDS |
| ACTCTTGCAGTTCTTTGCTT+GGG | 0.381464 | 3.1:+75501000 | None:intergenic |
| TGGCTTCACACCTGCCTTCA+AGG | 0.382880 | 3.1:+75497465 | None:intergenic |
| TTCAGGGCTTCCATTACTCC+TGG | 0.384116 | 3.1:-75499232 | MS.gene049376:intron |
| GGGACTCCATTTATCTTGAA+TGG | 0.388317 | 3.1:+75497858 | None:intergenic |
| AGAAGAATCAACACTGTTCC+AGG | 0.392446 | 3.1:+75499214 | None:intergenic |
| GCCGTAACCCTGAATTGATC+AGG | 0.416781 | 3.1:-75500975 | MS.gene049376:CDS |
| CCAAGGTAAGTCTTCAAGTC+TGG | 0.429639 | 3.1:+75497499 | None:intergenic |
| AACCGAAGAAATGTCTACTT+TGG | 0.432126 | 3.1:+75497794 | None:intergenic |
| ACAGTGTTGATTCTTCTTGC+CGG | 0.435433 | 3.1:-75499208 | MS.gene049376:CDS |
| GGCTTCTTCACATCGTCGGC+GGG | 0.438115 | 3.1:+75500811 | None:intergenic |
| CCCTGATCAATTCAGGGTTA+CGG | 0.450408 | 3.1:+75500974 | None:intergenic |
| GTGAATCAGGCATATGTTAT+CGG | 0.451583 | 3.1:-75497825 | MS.gene049376:CDS |
| GCCTGATTCACACGTCTCAA+TGG | 0.452522 | 3.1:+75497837 | None:intergenic |
| CAAGTCTGGAACACTGTCAA+TGG | 0.454071 | 3.1:+75497513 | None:intergenic |
| CGATACCCCTGATCAATTCA+GGG | 0.465988 | 3.1:+75500968 | None:intergenic |
| TGATCATCCTTCTTCTCTTG+GGG | 0.470714 | 3.1:+75497565 | None:intergenic |
| GTAAAACTTAGGTGGCTTCT+CGG | 0.476381 | 3.1:+75500834 | None:intergenic |
| AACCAAAGTAGACATTTCTT+CGG | 0.476825 | 3.1:-75497796 | MS.gene049376:CDS |
| TGAAGACTTACCTTGGTGCC+AGG | 0.485144 | 3.1:-75497492 | MS.gene049376:CDS |
| AGGGAAAGAACCACCGTGCT+TGG | 0.486637 | 3.1:+75500891 | None:intergenic |
| CAACACTGTTCCAGGAGTAA+TGG | 0.486929 | 3.1:+75499222 | None:intergenic |
| CCTGATTCACACGTCTCAAT+GGG | 0.486965 | 3.1:+75497838 | None:intergenic |
| AACTTAGGTGGCTTCTCGGC+GGG | 0.490640 | 3.1:+75500838 | None:intergenic |
| CCTGAATTGATCAGGGGTAT+CGG | 0.492309 | 3.1:-75500967 | MS.gene049376:CDS |
| GTACCACAAGCGTGGGATCT+GGG | 0.497259 | 3.1:-75500923 | MS.gene049376:CDS |
| GATCCCACGCTTGTGGTACA+TGG | 0.504975 | 3.1:+75500927 | None:intergenic |
| GGGAGAGAGCGAGTTCTTTG+AGG | 0.505471 | 3.1:-75497712 | MS.gene049376:CDS |
| ACCTGCCTTCAAGGAAAACC+TGG | 0.516282 | 3.1:+75497474 | None:intergenic |
| GGTGACGAACCTGAGCTTAG+TGG | 0.535903 | 3.1:+75500762 | None:intergenic |
| GATCAAAAGACTGTTGATGC+TGG | 0.542508 | 3.1:-75497547 | MS.gene049376:CDS |
| GATCATCCTTCTTCTCTTGG+GGG | 0.548827 | 3.1:+75497566 | None:intergenic |
| TCGTCGGCGGGGTAAAACTT+AGG | 0.552424 | 3.1:+75500823 | None:intergenic |
| GCTTTGGCTTGTGCTTGTTG+CGG | 0.553049 | 3.1:+75500785 | None:intergenic |
| CCGTAACCCTGAATTGATCA+GGG | 0.555623 | 3.1:-75500974 | MS.gene049376:CDS |
| AGCCAAAGCCCACTAAGCTC+AGG | 0.559866 | 3.1:-75500771 | MS.gene049376:intron |
| CCAGACTTGAAGACTTACCT+TGG | 0.561891 | 3.1:-75497499 | MS.gene049376:CDS |
| GGGGTATCGGAAAATACTCT+AGG | 0.568283 | 3.1:-75500954 | MS.gene049376:CDS |
| TGGCTTCTTCACATCGTCGG+CGG | 0.569896 | 3.1:+75500810 | None:intergenic |
| GGAGTTGCAGGCTTAGCGAC+GGG | 0.577539 | 3.1:+75500859 | None:intergenic |
| GGGAGTTGCAGGCTTAGCGA+CGG | 0.582599 | 3.1:+75500858 | None:intergenic |
| GTGACGAACCTGAGCTTAGT+GGG | 0.585384 | 3.1:+75500763 | None:intergenic |
| GGCTTGTGCTTGTTGCGGAG+TGG | 0.594085 | 3.1:+75500790 | None:intergenic |
| TGGCCCAGATCCCACGCTTG+TGG | 0.594361 | 3.1:+75500920 | None:intergenic |
| TGATGACAAGTACTTCTCAA+AGG | 0.595456 | 3.1:-75497757 | MS.gene049376:CDS |
| GTTCTTTGAGGCAGATAAGG+AGG | 0.599942 | 3.1:-75497700 | MS.gene049376:intron |
| CTCTAGAAGACCAACTCGTG+TGG | 0.601883 | 3.1:+75497445 | None:intergenic |
| GAGTGGCTTCTTCACATCGT+CGG | 0.602023 | 3.1:+75500807 | None:intergenic |
| GTAACGAGAAGAAGTCCAGA+AGG | 0.620622 | 3.1:+75499145 | None:intergenic |
| CACACGAGTTGGTCTTCTAG+AGG | 0.630211 | 3.1:-75497444 | None:intergenic |
| AGGTGTGAAGCCACACGAGT+TGG | 0.631048 | 3.1:-75497455 | MS.gene049376:CDS |
| TTAGCGACGGGATCGTGACG+AGG | 0.633658 | 3.1:+75500871 | None:intergenic |
| GCTTCTTCACATCGTCGGCG+GGG | 0.637997 | 3.1:+75500812 | None:intergenic |
| TCTGCCATGTACCACAAGCG+TGG | 0.644255 | 3.1:-75500931 | MS.gene049376:CDS |
| TCAAGGAAAACCTGGCACCA+AGG | 0.644709 | 3.1:+75497482 | None:intergenic |
| CTGCCATGTACCACAAGCGT+GGG | 0.650536 | 3.1:-75500930 | MS.gene049376:CDS |
| TGGGCCATCAAAGCCAAGCA+CGG | 0.651557 | 3.1:-75500904 | MS.gene049376:CDS |
| TCGGCGGGGTAAAACTTAGG+TGG | 0.654802 | 3.1:+75500826 | None:intergenic |
| AAACTTAGGTGGCTTCTCGG+CGG | 0.667362 | 3.1:+75500837 | None:intergenic |
| TAGCGACGGGATCGTGACGA+GGG | 0.688534 | 3.1:+75500872 | None:intergenic |
| CGTAACCCTGAATTGATCAG+GGG | 0.696777 | 3.1:-75500973 | MS.gene049376:CDS |
| GCCATCAAAGCCAAGCACGG+TGG | 0.747137 | 3.1:-75500901 | MS.gene049376:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAATATACAAATTTTCATA+GGG | - | chr3.1:75498155-75498174 | MS.gene049376:intron | 10.0% |
| !! | ATGATAAAATTTATGATGTT+AGG | - | chr3.1:75498618-75498637 | MS.gene049376:intron | 15.0% |
| !! | TATTGTTAATTATGATATGT+TGG | - | chr3.1:75497862-75497881 | MS.gene049376:CDS | 15.0% |
| !!! | GAAAATATACAAATTTTCAT+AGG | - | chr3.1:75498154-75498173 | MS.gene049376:intron | 15.0% |
| !!! | TAAATCTTTTTGAATAAAGT+TGG | - | chr3.1:75497732-75497751 | MS.gene049376:CDS | 15.0% |
| !!! | TGCTATTTGTTTATTTTTTT+TGG | - | chr3.1:75497826-75497845 | MS.gene049376:CDS | 15.0% |
| !!! | TTAAACTCTAATTGAAATTT+TGG | - | chr3.1:75498956-75498975 | MS.gene049376:intron | 15.0% |
| !! | AAGAAAACAAGAAATAAGAA+AGG | - | chr3.1:75500299-75500318 | MS.gene049376:intron | 20.0% |
| !! | AGAAAACAAGAAATAAGAAA+GGG | - | chr3.1:75500300-75500319 | MS.gene049376:intron | 20.0% |
| !! | ATCAAATCTAAAGGTTTAAA+TGG | + | chr3.1:75499585-75499604 | None:intergenic | 20.0% |
| !! | TAAACCAAAAAAACAATTAC+CGG | + | chr3.1:75499333-75499352 | None:intergenic | 20.0% |
| !! | TAATTTATTCTTTCTCAAGA+AGG | - | chr3.1:75499863-75499882 | MS.gene049376:intron | 20.0% |
| !! | TGAATGATTTATATAGTTCA+TGG | - | chr3.1:75499191-75499210 | MS.gene049376:CDS | 20.0% |
| !! | TTATCAATAGAAATGAACAA+CGG | + | chr3.1:75497715-75497734 | None:intergenic | 20.0% |
| !!! | AAATTTGAGATTTGATTCAT+TGG | - | chr3.1:75498101-75498120 | MS.gene049376:intron | 20.0% |
| !!! | AATTTTGTTAGTGTCTATAT+TGG | - | chr3.1:75499139-75499158 | MS.gene049376:intron | 20.0% |
| !!! | CACAAATACGTAAATAATTT+TGG | + | chr3.1:75499459-75499478 | None:intergenic | 20.0% |
| !!! | GTAATTGTTTTTTTGGTTTA+AGG | - | chr3.1:75499333-75499352 | MS.gene049376:intron | 20.0% |
| !!! | TGGAGATATACATATAATTT+TGG | - | chr3.1:75499920-75499939 | MS.gene049376:intron | 20.0% |
| !!! | TGTATTTTGAAGTTCAAATA+TGG | - | chr3.1:75497958-75497977 | MS.gene049376:intron | 20.0% |
| !!! | TTTAGACATTATTTTGAAAC+TGG | + | chr3.1:75500158-75500177 | None:intergenic | 20.0% |
| ! | AAAATTGCTTCTTATACATG+TGG | - | chr3.1:75499840-75499859 | MS.gene049376:intron | 25.0% |
| ! | AACAACAACATTGTAAAGAT+CGG | + | chr3.1:75500844-75500863 | None:intergenic | 25.0% |
| ! | AATTAAGTATCAGGAAAACA+TGG | - | chr3.1:75498647-75498666 | MS.gene049376:intron | 25.0% |
| ! | AGGAATTGAAATTAAGTATC+AGG | - | chr3.1:75498638-75498657 | MS.gene049376:intron | 25.0% |
| ! | ATTAAGTATCAGGAAAACAT+GGG | - | chr3.1:75498648-75498667 | MS.gene049376:intron | 25.0% |
| ! | GTACAACAAGCAAATATATA+TGG | + | chr3.1:75499402-75499421 | None:intergenic | 25.0% |
| ! | GTGAATATATGGAAAATATG+CGG | - | chr3.1:75498254-75498273 | MS.gene049376:intron | 25.0% |
| ! | GTTAATTATGATATGTTGGA+CGG | - | chr3.1:75497866-75497885 | MS.gene049376:intron | 25.0% |
| ! | TGAATATATGGAAAATATGC+GGG | - | chr3.1:75498255-75498274 | MS.gene049376:intron | 25.0% |
| ! | TGTACTACAATCAAATCTAA+AGG | + | chr3.1:75499594-75499613 | None:intergenic | 25.0% |
| ! | TTGAATGTTTACACACATTA+TGG | + | chr3.1:75499808-75499827 | None:intergenic | 25.0% |
| ! | TTTATTAACATGTGTTGAGT+GGG | - | chr3.1:75498682-75498701 | MS.gene049376:intron | 25.0% |
| !! | AAGTTCAAATATGGATTTTG+GGG | - | chr3.1:75497967-75497986 | MS.gene049376:intron | 25.0% |
| !! | AATTAAGTTTTTCACCTTTG+AGG | + | chr3.1:75500436-75500455 | None:intergenic | 25.0% |
| !! | ATACAAATTTTCATAGGGTT+AGG | - | chr3.1:75498160-75498179 | MS.gene049376:intron | 25.0% |
| !! | GAAGTTCAAATATGGATTTT+GGG | - | chr3.1:75497966-75497985 | MS.gene049376:intron | 25.0% |
| !! | TACAAATTTTCATAGGGTTA+GGG | - | chr3.1:75498161-75498180 | MS.gene049376:intron | 25.0% |
| !! | TAGATACACTTTGAATTTTC+CGG | + | chr3.1:75497778-75497797 | None:intergenic | 25.0% |
| !! | TGAAGTTCAAATATGGATTT+TGG | - | chr3.1:75497965-75497984 | MS.gene049376:intron | 25.0% |
| !! | TTTTATTAACATGTGTTGAG+TGG | - | chr3.1:75498681-75498700 | MS.gene049376:intron | 25.0% |
| !!! | GAAATGGATTTTGTGAATAA+AGG | - | chr3.1:75497888-75497907 | MS.gene049376:intron | 25.0% |
| !!! | TGAGTTGTTTTAGAATTCTT+GGG | - | chr3.1:75498034-75498053 | MS.gene049376:intron | 25.0% |
| !!! | TTGAGTTGTTTTAGAATTCT+TGG | - | chr3.1:75498033-75498052 | MS.gene049376:intron | 25.0% |
| !!! | TTTAAATGCTGTTTCGTTTT+TGG | - | chr3.1:75498582-75498601 | MS.gene049376:intron | 25.0% |
| AAAGGGTGAAAAAGCAAATA+TGG | - | chr3.1:75500317-75500336 | MS.gene049376:intron | 30.0% | |
| AAATATGGGGGTTAATGATA+AGG | - | chr3.1:75500332-75500351 | MS.gene049376:intron | 30.0% | |
| AACCAAAGTAGACATTTCTT+CGG | - | chr3.1:75500657-75500676 | MS.gene049376:intron | 30.0% | |
| AACTTCAAAATACAGTTAGC+AGG | + | chr3.1:75497952-75497971 | None:intergenic | 30.0% | |
| AAGGGTGAAAAAGCAAATAT+GGG | - | chr3.1:75500318-75500337 | MS.gene049376:intron | 30.0% | |
| AATGTAGCTAAGGATGATTA+CGG | + | chr3.1:75499951-75499970 | None:intergenic | 30.0% | |
| ACAATAGAGACTGTCATATT+TGG | - | chr3.1:75499558-75499577 | MS.gene049376:intron | 30.0% | |
| ACTTCAAAATACAGTTAGCA+GGG | + | chr3.1:75497951-75497970 | None:intergenic | 30.0% | |
| AGTAAATGTGAATGTAGCTA+AGG | + | chr3.1:75499961-75499980 | None:intergenic | 30.0% | |
| CAAGCAAAACAACATCAAAA+AGG | + | chr3.1:75498459-75498478 | None:intergenic | 30.0% | |
| CGAATCTTTCTGTGAATATA+TGG | - | chr3.1:75498243-75498262 | MS.gene049376:intron | 30.0% | |
| GAAGAAAAAGATAGTCCTAT+AGG | - | chr3.1:75499617-75499636 | MS.gene049376:intron | 30.0% | |
| GAGAATGAACAAATGAAGAT+TGG | + | chr3.1:75500563-75500582 | None:intergenic | 30.0% | |
| GATTGAAACTAAATCAACCT+TGG | - | chr3.1:75499478-75499497 | MS.gene049376:intron | 30.0% | |
| TAAACCAATAGAGTGTACTA+AGG | + | chr3.1:75498538-75498557 | None:intergenic | 30.0% | |
| TAATGATAAGGAAAGTAGGT+AGG | - | chr3.1:75500344-75500363 | MS.gene049376:intron | 30.0% | |
| TACGAATTGAATATTACCAC+CGG | - | chr3.1:75497756-75497775 | MS.gene049376:CDS | 30.0% | |
| TAGGAATTGTATTCGTGTTT+GGG | - | chr3.1:75498007-75498026 | MS.gene049376:intron | 30.0% | |
| TATCAACATTATGGATATGC+CGG | - | chr3.1:75498830-75498849 | MS.gene049376:intron | 30.0% | |
| TGATATTAAACACGCACATA+GGG | - | chr3.1:75498198-75498217 | MS.gene049376:intron | 30.0% | |
| TGCATCATCAATATAACTCA+TGG | + | chr3.1:75499424-75499443 | None:intergenic | 30.0% | |
| TTAGGAATTGTATTCGTGTT+TGG | - | chr3.1:75498006-75498025 | MS.gene049376:intron | 30.0% | |
| TTATTAACATGTGTTGAGTG+GGG | - | chr3.1:75498683-75498702 | MS.gene049376:intron | 30.0% | |
| TTCATGTTATTACCTGAGAT+TGG | - | chr3.1:75499366-75499385 | MS.gene049376:intron | 30.0% | |
| ! | AAAGTATGAAAGTATGGTGT+AGG | - | chr3.1:75497924-75497943 | MS.gene049376:intron | 30.0% |
| ! | AAGTAATGACTTGTGAGATA+TGG | - | chr3.1:75499535-75499554 | MS.gene049376:intron | 30.0% |
| ! | CATGAGTCTACATTACATTT+TGG | - | chr3.1:75500039-75500058 | MS.gene049376:intron | 30.0% |
| ! | GGTTTGATTTATGTGTGATT+AGG | - | chr3.1:75497988-75498007 | MS.gene049376:intron | 30.0% |
| ! | GTTTTCTTACATTACAGCTT+CGG | + | chr3.1:75500287-75500306 | None:intergenic | 30.0% |
| ! | TGGATTTTGTGAATAAAGGA+TGG | - | chr3.1:75497892-75497911 | MS.gene049376:intron | 30.0% |
| ! | TTTTCTTACATTACAGCTTC+GGG | + | chr3.1:75500286-75500305 | None:intergenic | 30.0% |
| !! | TTAGTACACTCTATTGGTTT+AGG | - | chr3.1:75498537-75498556 | MS.gene049376:intron | 30.0% |
| !!! | AGTTCATGGTTTTGTTTTCA+GGG | - | chr3.1:75499205-75499224 | MS.gene049376:CDS | 30.0% |
| !!! | GAGCACTTTTTTATCCTAAA+AGG | + | chr3.1:75500868-75500887 | None:intergenic | 30.0% |
| !!! | GTTACCGGTAATTGTTTTTT+TGG | - | chr3.1:75499326-75499345 | MS.gene049376:intron | 30.0% |
| !!! | TAGTTCATGGTTTTGTTTTC+AGG | - | chr3.1:75499204-75499223 | MS.gene049376:CDS | 30.0% |
| AAAGTTGAACAACAACCCAA+TGG | + | chr3.1:75500393-75500412 | None:intergenic | 35.0% | |
| AACCGAAGAAATGTCTACTT+TGG | + | chr3.1:75500662-75500681 | None:intergenic | 35.0% | |
| AATAGTCTGTGTCTTGATTG+TGG | - | chr3.1:75498507-75498526 | MS.gene049376:intron | 35.0% | |
| AGGGTGAAAAAGCAAATATG+GGG | - | chr3.1:75500319-75500338 | MS.gene049376:intron | 35.0% | |
| AGTAAGGGATCTCAATAGTT+GGG | - | chr3.1:75500099-75500118 | MS.gene049376:intron | 35.0% | |
| ATCCCAGAAAAAGACTAAGA+AGG | - | chr3.1:75500720-75500739 | MS.gene049376:intron | 35.0% | |
| ATTTATCTTGAATGGACCTG+AGG | + | chr3.1:75500590-75500609 | None:intergenic | 35.0% | |
| CAACTCACTTTCTAACCTAT+AGG | + | chr3.1:75499635-75499654 | None:intergenic | 35.0% | |
| CTCAAAGAGACAAAGAATGA+TGG | - | chr3.1:75498766-75498785 | MS.gene049376:intron | 35.0% | |
| CTTCTGCTTCTTAGTAAACA+TGG | - | chr3.1:75499900-75499919 | MS.gene049376:intron | 35.0% | |
| GAGACTAAAGAAGGTCTTTA+AGG | + | chr3.1:75500527-75500546 | None:intergenic | 35.0% | |
| GGAACATAAAATACTGACCA+AGG | + | chr3.1:75499498-75499517 | None:intergenic | 35.0% | |
| GGGTTAATGATAAGGAAAGT+AGG | - | chr3.1:75500340-75500359 | MS.gene049376:intron | 35.0% | |
| GTAGACTCATGATACAAGAA+GGG | + | chr3.1:75500030-75500049 | None:intergenic | 35.0% | |
| GTGAATAAAGGATGGAGAAA+CGG | - | chr3.1:75497900-75497919 | MS.gene049376:intron | 35.0% | |
| GTGAATCAGGCATATGTTAT+CGG | - | chr3.1:75500628-75500647 | MS.gene049376:intron | 35.0% | |
| GTGATATTAAACACGCACAT+AGG | - | chr3.1:75498197-75498216 | MS.gene049376:intron | 35.0% | |
| TACAAGAAGGGTAGATGAAA+TGG | + | chr3.1:75500018-75500037 | None:intergenic | 35.0% | |
| TATGATATGTTGGACGGAAA+TGG | - | chr3.1:75497872-75497891 | MS.gene049376:intron | 35.0% | |
| TATTAACATGTGTTGAGTGG+GGG | - | chr3.1:75498684-75498703 | MS.gene049376:intron | 35.0% | |
| TCAACTTTGACAAGCAAAAC+AGG | - | chr3.1:75500405-75500424 | MS.gene049376:intron | 35.0% | |
| TCAAGACACAGACTATTAGT+TGG | + | chr3.1:75498504-75498523 | None:intergenic | 35.0% | |
| TCAGGTCCATTCAAGATAAA+TGG | - | chr3.1:75500589-75500608 | MS.gene049376:intron | 35.0% | |
| TCCCAGAAAAAGACTAAGAA+GGG | - | chr3.1:75500721-75500740 | MS.gene049376:intron | 35.0% | |
| TCTCTTTCCCTTAAATCTTC+CGG | + | chr3.1:75499267-75499286 | None:intergenic | 35.0% | |
| TGAATAAAGGATGGAGAAAC+GGG | - | chr3.1:75497901-75497920 | MS.gene049376:intron | 35.0% | |
| TGATGACAAGTACTTCTCAA+AGG | - | chr3.1:75500696-75500715 | MS.gene049376:intron | 35.0% | |
| TGTAGACTCATGATACAAGA+AGG | + | chr3.1:75500031-75500050 | None:intergenic | 35.0% | |
| TGTGAATCTCAGTCATTAGT+TGG | + | chr3.1:75500204-75500223 | None:intergenic | 35.0% | |
| TGTGTTTGGTTGAAAAGTGA+AGG | - | chr3.1:75499682-75499701 | MS.gene049376:intron | 35.0% | |
| TTAAGCCACAATGAGTTGTT+CGG | + | chr3.1:75500131-75500150 | None:intergenic | 35.0% | |
| TTAGTTGGATGAAGATCAGA+TGG | + | chr3.1:75500189-75500208 | None:intergenic | 35.0% | |
| TTGATCATCCTTCTTCTCTT+GGG | + | chr3.1:75500892-75500911 | None:intergenic | 35.0% | |
| TTGTAAAGATCGGCATACAA+AGG | + | chr3.1:75500834-75500853 | None:intergenic | 35.0% | |
| TTTGATCATCCTTCTTCTCT+TGG | + | chr3.1:75500893-75500912 | None:intergenic | 35.0% | |
| ! | AACGGGAAAGTATGAAAGTA+TGG | - | chr3.1:75497918-75497937 | MS.gene049376:intron | 35.0% |
| ! | ATACACTTTGAATTTTCCGG+TGG | + | chr3.1:75497775-75497794 | None:intergenic | 35.0% |
| ! | ATCAAACTTATCGTTCTGAG+CGG | - | chr3.1:75500246-75500265 | MS.gene049376:intron | 35.0% |
| ! | GGTCAGTATTTTATGTTCCA+GGG | - | chr3.1:75499499-75499518 | MS.gene049376:intron | 35.0% |
| ! | TGGTCAGTATTTTATGTTCC+AGG | - | chr3.1:75499498-75499517 | MS.gene049376:intron | 35.0% |
| !! | CAATGTTGTTGTTGCCTTTT+AGG | - | chr3.1:75500851-75500870 | MS.gene049376:CDS | 35.0% |
| !! | TCCCTTCTTAGTCTTTTTCT+GGG | + | chr3.1:75500725-75500744 | None:intergenic | 35.0% |
| !!! | ATATTTTTTTTGGGTACGGG+GGG | - | chr3.1:75498707-75498726 | MS.gene049376:intron | 35.0% |
| !!! | GAGTGGGGGATATTTTTTTT+GGG | - | chr3.1:75498698-75498717 | MS.gene049376:intron | 35.0% |
| !!! | GATATTTTTTTTGGGTACGG+GGG | - | chr3.1:75498706-75498725 | MS.gene049376:intron | 35.0% |
| !!! | GCTTCTGTTTTGAAGTTCTT+TGG | - | chr3.1:75498901-75498920 | MS.gene049376:intron | 35.0% |
| !!! | GGATATTTTTTTTGGGTACG+GGG | - | chr3.1:75498705-75498724 | MS.gene049376:intron | 35.0% |
| !!! | GGGATATTTTTTTTGGGTAC+GGG | - | chr3.1:75498704-75498723 | MS.gene049376:intron | 35.0% |
| !!! | GGGGATATTTTTTTTGGGTA+CGG | - | chr3.1:75498703-75498722 | MS.gene049376:intron | 35.0% |
| !!! | TGAGTGGGGGATATTTTTTT+TGG | - | chr3.1:75498697-75498716 | MS.gene049376:intron | 35.0% |
| ACAACAATGCAACAGCCATT+GGG | - | chr3.1:75500375-75500394 | MS.gene049376:intron | 40.0% | |
| ACAGGCAGCTATCAACATTA+TGG | - | chr3.1:75498821-75498840 | MS.gene049376:intron | 40.0% | |
| ACTCTTGCAGTTCTTTGCTT+GGG | + | chr3.1:75497456-75497475 | None:intergenic | 40.0% | |
| ACTTGTCTAACTGATATCCC+TGG | + | chr3.1:75499519-75499538 | None:intergenic | 40.0% | |
| AGAAGAATCAACACTGTTCC+AGG | + | chr3.1:75499242-75499261 | None:intergenic | 40.0% | |
| AGATGAGAGGAGACTAAAGA+AGG | + | chr3.1:75500536-75500555 | None:intergenic | 40.0% | |
| AGGAAAACATGCAGTCAGTA+AGG | - | chr3.1:75500083-75500102 | MS.gene049376:intron | 40.0% | |
| AGTATCAGGAAAACATGGGT+TGG | - | chr3.1:75498652-75498671 | MS.gene049376:intron | 40.0% | |
| CAAAACAGGACAAACCTCAA+AGG | - | chr3.1:75500419-75500438 | MS.gene049376:intron | 40.0% | |
| CAGTAAGGGATCTCAATAGT+TGG | - | chr3.1:75500098-75500117 | MS.gene049376:intron | 40.0% | |
| CCAACCTTAGTACACTCTAT+TGG | - | chr3.1:75498531-75498550 | MS.gene049376:intron | 40.0% | |
| CCAATAGAGTGTACTAAGGT+TGG | + | chr3.1:75498534-75498553 | None:intergenic | 40.0% | |
| CTTCTTGCCGGAAGATTTAA+GGG | - | chr3.1:75499257-75499276 | MS.gene049376:intron | 40.0% | |
| GATCAAAAGACTGTTGATGC+TGG | - | chr3.1:75500906-75500925 | MS.gene049376:CDS | 40.0% | |
| GCTCAGAACGATAAGTTTGA+TGG | + | chr3.1:75500247-75500266 | None:intergenic | 40.0% | |
| GGAAAACATGCAGTCAGTAA+GGG | - | chr3.1:75500084-75500103 | MS.gene049376:intron | 40.0% | |
| GGGACTCCATTTATCTTGAA+TGG | + | chr3.1:75500598-75500617 | None:intergenic | 40.0% | |
| GGGTGAAAAAGCAAATATGG+GGG | - | chr3.1:75500320-75500339 | MS.gene049376:intron | 40.0% | |
| GTAAAACTTAGGTGGCTTCT+CGG | + | chr3.1:75497622-75497641 | None:intergenic | 40.0% | |
| GTTAGAAAGTGAGTTGCTGT+TGG | - | chr3.1:75499639-75499658 | MS.gene049376:intron | 40.0% | |
| GTTCGGTAAATCACTGTGTT+TGG | - | chr3.1:75499668-75499687 | MS.gene049376:intron | 40.0% | |
| TACTCTTGCAGTTCTTTGCT+TGG | + | chr3.1:75497457-75497476 | None:intergenic | 40.0% | |
| TCTTCTTGCCGGAAGATTTA+AGG | - | chr3.1:75499256-75499275 | MS.gene049376:intron | 40.0% | |
| TGATCATCCTTCTTCTCTTG+GGG | + | chr3.1:75500891-75500910 | None:intergenic | 40.0% | |
| TGCTTTCGTCCATGTGTTTA+CGG | - | chr3.1:75498298-75498317 | MS.gene049376:intron | 40.0% | |
| TTGTTCATTCTCACTTCCTC+AGG | - | chr3.1:75500571-75500590 | MS.gene049376:intron | 40.0% | |
| ! | CATGTTTTCCTTGACTGTTG+CGG | + | chr3.1:75500074-75500093 | None:intergenic | 40.0% |
| ! | TTTTCCTGTTGTTCGTCTCA+GGG | - | chr3.1:75498877-75498896 | MS.gene049376:intron | 40.0% |
| ! | TTTTGCTTGTGTGCTCTGTT+TGG | - | chr3.1:75498470-75498489 | MS.gene049376:intron | 40.0% |
| !! | ACAGTGTTGATTCTTCTTGC+CGG | - | chr3.1:75499245-75499264 | MS.gene049376:intron | 40.0% |
| !! | AGCTTTGTTAGTCTGGTGTT+AGG | - | chr3.1:75498383-75498402 | MS.gene049376:intron | 40.0% |
| !! | CTCCCTTCTTAGTCTTTTTC+TGG | + | chr3.1:75500726-75500745 | None:intergenic | 40.0% |
| !! | CTTTCTGAGCTTTGTTAGTC+TGG | - | chr3.1:75498376-75498395 | MS.gene049376:intron | 40.0% |
| !! | GTACACTCTATTGGTTTAGG+TGG | - | chr3.1:75498540-75498559 | MS.gene049376:intron | 40.0% |
| !!! | TATTTTTTTTGGGTACGGGG+GGG | - | chr3.1:75498708-75498727 | MS.gene049376:intron | 40.0% |
| AACAACAGGAAAAGGAGGAG+GGG | + | chr3.1:75498870-75498889 | None:intergenic | 45.0% | |
| AGACGAACAACAGGAAAAGG+AGG | + | chr3.1:75498875-75498894 | None:intergenic | 45.0% | |
| CAACACTGTTCCAGGAGTAA+TGG | + | chr3.1:75499234-75499253 | None:intergenic | 45.0% | |
| CAACATTATGGATATGCCGG+TGG | - | chr3.1:75498833-75498852 | MS.gene049376:intron | 45.0% | |
| CACAACAATGCAACAGCCAT+TGG | - | chr3.1:75500374-75500393 | MS.gene049376:intron | 45.0% | |
| CCAAGGTAAGTCTTCAAGTC+TGG | + | chr3.1:75500957-75500976 | None:intergenic | 45.0% | |
| CCAGACTTGAAGACTTACCT+TGG | - | chr3.1:75500954-75500973 | MS.gene049376:CDS | 45.0% | |
| CCCTGATCAATTCAGGGTTA+CGG | + | chr3.1:75497482-75497501 | None:intergenic | 45.0% | |
| CCGTAACCCTGAATTGATCA+GGG | - | chr3.1:75497479-75497498 | MS.gene049376:CDS | 45.0% | |
| CCTGATTCACACGTCTCAAT+GGG | + | chr3.1:75500618-75500637 | None:intergenic | 45.0% | |
| CGATACCCCTGATCAATTCA+GGG | + | chr3.1:75497488-75497507 | None:intergenic | 45.0% | |
| CGTAACCCTGAATTGATCAG+GGG | - | chr3.1:75497480-75497499 | MS.gene049376:CDS | 45.0% | |
| CTCACTGCGAAGTATGGATT+GGG | + | chr3.1:75498794-75498813 | None:intergenic | 45.0% | |
| CTGAGACGAACAACAGGAAA+AGG | + | chr3.1:75498878-75498897 | None:intergenic | 45.0% | |
| GAAAAACAACACGAGTGCGA+CGG | + | chr3.1:75498351-75498370 | None:intergenic | 45.0% | |
| GAACAACAGGAAAAGGAGGA+GGG | + | chr3.1:75498871-75498890 | None:intergenic | 45.0% | |
| GAAGACCGAACAACTCATTG+TGG | - | chr3.1:75500123-75500142 | MS.gene049376:intron | 45.0% | |
| GATCATCCTTCTTCTCTTGG+GGG | + | chr3.1:75500890-75500909 | None:intergenic | 45.0% | |
| GGTTACATGCAACCAATCTC+AGG | + | chr3.1:75499381-75499400 | None:intergenic | 45.0% | |
| GGTTCAGTCAAGTACGATGT+TGG | - | chr3.1:75498743-75498762 | MS.gene049376:intron | 45.0% | |
| GTAAACACATGGACGAAAGC+AGG | + | chr3.1:75498299-75498318 | None:intergenic | 45.0% | |
| GTAACGAGAAGAAGTCCAGA+AGG | + | chr3.1:75499311-75499330 | None:intergenic | 45.0% | |
| TCTGGACTTCTTCTCGTTAC+CGG | - | chr3.1:75499311-75499330 | MS.gene049376:intron | 45.0% | |
| TTCGTCCATGTGTTTACGGT+CGG | - | chr3.1:75498302-75498321 | MS.gene049376:intron | 45.0% | |
| TTTCCTGTTGTTCGTCTCAG+GGG | - | chr3.1:75498878-75498897 | MS.gene049376:intron | 45.0% | |
| TTTCTCAAGCAGCTTCCTTC+TGG | - | chr3.1:75499293-75499312 | MS.gene049376:intron | 45.0% | |
| ! | AAAGTGAGTTGCTGTTGGAG+GGG | - | chr3.1:75499644-75499663 | MS.gene049376:intron | 45.0% |
| ! | AGAAAGTGAGTTGCTGTTGG+AGG | - | chr3.1:75499642-75499661 | MS.gene049376:intron | 45.0% |
| ! | CAAGTCTGGAACACTGTCAA+TGG | + | chr3.1:75500943-75500962 | None:intergenic | 45.0% |
| ! | CCTGAATTGATCAGGGGTAT+CGG | - | chr3.1:75497486-75497505 | MS.gene049376:CDS | 45.0% |
| ! | CTTTTCCTGTTGTTCGTCTC+AGG | - | chr3.1:75498876-75498895 | MS.gene049376:intron | 45.0% |
| ! | GAAAGTGAGTTGCTGTTGGA+GGG | - | chr3.1:75499643-75499662 | MS.gene049376:intron | 45.0% |
| ! | GAAGATTGGTCAGAGATGAG+AGG | + | chr3.1:75500549-75500568 | None:intergenic | 45.0% |
| !! | AGGAAAACATGGGTTGGCTT+TGG | - | chr3.1:75498658-75498677 | MS.gene049376:intron | 45.0% |
| !! | CGAGTTCTTTGAGGCAGATA+AGG | - | chr3.1:75500750-75500769 | MS.gene049376:intron | 45.0% |
| !! | GGGGTATCGGAAAATACTCT+AGG | - | chr3.1:75497499-75497518 | MS.gene049376:CDS | 45.0% |
| !! | GTTCTTTGAGGCAGATAAGG+AGG | - | chr3.1:75500753-75500772 | MS.gene049376:intron | 45.0% |
| !!! | ATTTTTTTTGGGTACGGGGG+GGG | - | chr3.1:75498709-75498728 | MS.gene049376:intron | 45.0% |
| AAACTTAGGTGGCTTCTCGG+CGG | + | chr3.1:75497619-75497638 | None:intergenic | 50.0% | |
| ACAACAGGAAAAGGAGGAGG+GGG | + | chr3.1:75498869-75498888 | None:intergenic | 50.0% | |
| ACCTACCGACCGTAAACACA+TGG | + | chr3.1:75498310-75498329 | None:intergenic | 50.0% | |
| ACCTGCCTTCAAGGAAAACC+TGG | + | chr3.1:75500982-75501001 | None:intergenic | 50.0% | |
| CATTATGGATATGCCGGTGG+CGG | - | chr3.1:75498836-75498855 | MS.gene049376:intron | 50.0% | |
| CCCATTGAGACGTGTGAATC+AGG | - | chr3.1:75500615-75500634 | MS.gene049376:intron | 50.0% | |
| CCGATACCCCTGATCAATTC+AGG | + | chr3.1:75497489-75497508 | None:intergenic | 50.0% | |
| CGAACAACAGGAAAAGGAGG+AGG | + | chr3.1:75498872-75498891 | None:intergenic | 50.0% | |
| GAGTGGCTTCTTCACATCGT+CGG | + | chr3.1:75497649-75497668 | None:intergenic | 50.0% | |
| GCCGTAACCCTGAATTGATC+AGG | - | chr3.1:75497478-75497497 | MS.gene049376:CDS | 50.0% | |
| GCCTGATTCACACGTCTCAA+TGG | + | chr3.1:75500619-75500638 | None:intergenic | 50.0% | |
| GCTCACTGCGAAGTATGGAT+TGG | + | chr3.1:75498795-75498814 | None:intergenic | 50.0% | |
| GGCTGTTGCATTGTTGTGCA+AGG | + | chr3.1:75500372-75500391 | None:intergenic | 50.0% | |
| GTGACGAACCTGAGCTTAGT+GGG | + | chr3.1:75497693-75497712 | None:intergenic | 50.0% | |
| TCAAGGAAAACCTGGCACCA+AGG | + | chr3.1:75500974-75500993 | None:intergenic | 50.0% | |
| TCCATGTGTTTACGGTCGGT+AGG | - | chr3.1:75498306-75498325 | MS.gene049376:intron | 50.0% | |
| TTCAGGGCTTCCATTACTCC+TGG | - | chr3.1:75499221-75499240 | MS.gene049376:CDS | 50.0% | |
| TTCCTGTTGTTCGTCTCAGG+GGG | - | chr3.1:75498879-75498898 | MS.gene049376:intron | 50.0% | |
| !! | AACCTGAGCTTAGTGGGCTT+TGG | + | chr3.1:75497687-75497706 | None:intergenic | 50.0% |
| !! | CATCGATTCCGCAACAGTCA+AGG | - | chr3.1:75500063-75500082 | MS.gene049376:intron | 50.0% |
| !! | GCTTTGGCTTGTGCTTGTTG+CGG | + | chr3.1:75497671-75497690 | None:intergenic | 50.0% |
| !! | TGAAGACTTACCTTGGTGCC+AGG | - | chr3.1:75500961-75500980 | MS.gene049376:CDS | 50.0% |
| !! | TGGTGCCAGGTTTTCCTTGA+AGG | - | chr3.1:75500974-75500993 | MS.gene049376:CDS | 50.0% |
| !!! | TTTTTTTTGGGTACGGGGGG+GGG | - | chr3.1:75498710-75498729 | MS.gene049376:intron | 50.0% |
| AACTTAGGTGGCTTCTCGGC+GGG | + | chr3.1:75497618-75497637 | None:intergenic | 55.0% | |
| AGCCAAAGCCCACTAAGCTC+AGG | - | chr3.1:75497682-75497701 | MS.gene049376:intron | 55.0% | |
| AGGGAAAGAACCACCGTGCT+TGG | + | chr3.1:75497565-75497584 | None:intergenic | 55.0% | |
| AGGTGTGAAGCCACACGAGT+TGG | - | chr3.1:75500998-75501017 | MS.gene049376:CDS | 55.0% | |
| AGTGCTCCCCCAAGAGAAGA+AGG | - | chr3.1:75500881-75500900 | MS.gene049376:CDS | 55.0% | |
| CACATGGACGAAAGCAGGTC+AGG | + | chr3.1:75498294-75498313 | None:intergenic | 55.0% | |
| CATACTTCGCAGTGAGCAGC+GGG | - | chr3.1:75498798-75498817 | MS.gene049376:intron | 55.0% | |
| CCATACTTCGCAGTGAGCAG+CGG | - | chr3.1:75498797-75498816 | MS.gene049376:intron | 55.0% | |
| CTGCCATGTACCACAAGCGT+GGG | - | chr3.1:75497523-75497542 | MS.gene049376:CDS | 55.0% | |
| GATCCCACGCTTGTGGTACA+TGG | + | chr3.1:75497529-75497548 | None:intergenic | 55.0% | |
| GGGAGAGAGCGAGTTCTTTG+AGG | - | chr3.1:75500741-75500760 | MS.gene049376:intron | 55.0% | |
| GGTGACGAACCTGAGCTTAG+TGG | + | chr3.1:75497694-75497713 | None:intergenic | 55.0% | |
| GTACCACAAGCGTGGGATCT+GGG | - | chr3.1:75497530-75497549 | MS.gene049376:CDS | 55.0% | |
| TCGGCGGGGTAAAACTTAGG+TGG | + | chr3.1:75497630-75497649 | None:intergenic | 55.0% | |
| TCGTCGGCGGGGTAAAACTT+AGG | + | chr3.1:75497633-75497652 | None:intergenic | 55.0% | |
| TCTGCCATGTACCACAAGCG+TGG | - | chr3.1:75497522-75497541 | MS.gene049376:CDS | 55.0% | |
| TGGCTTCACACCTGCCTTCA+AGG | + | chr3.1:75500991-75501010 | None:intergenic | 55.0% | |
| TGGCTTCTTCACATCGTCGG+CGG | + | chr3.1:75497646-75497665 | None:intergenic | 55.0% | |
| TGGGCCATCAAAGCCAAGCA+CGG | - | chr3.1:75497549-75497568 | MS.gene049376:CDS | 55.0% | |
| TGTACCACAAGCGTGGGATC+TGG | - | chr3.1:75497529-75497548 | MS.gene049376:CDS | 55.0% | |
| ! | GCCAGGTTTTCCTTGAAGGC+AGG | - | chr3.1:75500978-75500997 | MS.gene049376:CDS | 55.0% |
| !! | ACCACCGTGCTTGGCTTTGA+TGG | + | chr3.1:75497556-75497575 | None:intergenic | 55.0% |
| !! | GTTGCTGTTGGAGGGGTGTT+CGG | - | chr3.1:75499651-75499670 | MS.gene049376:intron | 55.0% |
| !!! | TTTTTTTGGGTACGGGGGGG+GGG | - | chr3.1:75498711-75498730 | MS.gene049376:intron | 55.0% |
| AGCCCCCTGAGACGAACAAC+AGG | + | chr3.1:75498884-75498903 | None:intergenic | 60.0% | |
| CCGCTGCTCACTGCGAAGTA+TGG | + | chr3.1:75498800-75498819 | None:intergenic | 60.0% | |
| GCCATCAAAGCCAAGCACGG+TGG | - | chr3.1:75497552-75497571 | MS.gene049376:CDS | 60.0% | |
| GCTTCTTCACATCGTCGGCG+GGG | + | chr3.1:75497644-75497663 | None:intergenic | 60.0% | |
| GGAGTTGCAGGCTTAGCGAC+GGG | + | chr3.1:75497597-75497616 | None:intergenic | 60.0% | |
| GGCTTCTTCACATCGTCGGC+GGG | + | chr3.1:75497645-75497664 | None:intergenic | 60.0% | |
| GGGAGTTGCAGGCTTAGCGA+CGG | + | chr3.1:75497598-75497617 | None:intergenic | 60.0% | |
| TAGCGACGGGATCGTGACGA+GGG | + | chr3.1:75497584-75497603 | None:intergenic | 60.0% | |
| TTAGCGACGGGATCGTGACG+AGG | + | chr3.1:75497585-75497604 | None:intergenic | 60.0% | |
| ! | ATCGTTCTGAGCGGCGACCA+TGG | - | chr3.1:75500255-75500274 | MS.gene049376:intron | 60.0% |
| ! | GGCTTGTGCTTGTTGCGGAG+TGG | + | chr3.1:75497666-75497685 | None:intergenic | 60.0% |
| ! | TCGTTCTGAGCGGCGACCAT+GGG | - | chr3.1:75500256-75500275 | MS.gene049376:intron | 60.0% |
| !!! | TTTTTTGGGTACGGGGGGGG+GGG | - | chr3.1:75498712-75498731 | MS.gene049376:intron | 60.0% |
| CAGGAAAAGGAGGAGGGGGC+TGG | + | chr3.1:75498865-75498884 | None:intergenic | 65.0% | |
| TACAGCTTCGGGCTCCCCCA+TGG | + | chr3.1:75500275-75500294 | None:intergenic | 65.0% | |
| TGGCCCAGATCCCACGCTTG+TGG | + | chr3.1:75497536-75497555 | None:intergenic | 65.0% | |
| TTCGCAGTGAGCAGCGGGAC+AGG | - | chr3.1:75498803-75498822 | MS.gene049376:intron | 65.0% | |
| ! | CGTTCTGAGCGGCGACCATG+GGG | - | chr3.1:75500257-75500276 | MS.gene049376:intron | 65.0% |
| ! | GTTCTGAGCGGCGACCATGG+GGG | - | chr3.1:75500258-75500277 | MS.gene049376:intron | 65.0% |
| !!! | TTTTTGGGTACGGGGGGGGG+GGG | - | chr3.1:75498713-75498732 | MS.gene049376:intron | 65.0% |
| GGCTTCTCGGCGGGAGTTGC+AGG | + | chr3.1:75497609-75497628 | None:intergenic | 70.0% | |
| !! | TTTTGGGTACGGGGGGGGGG+GGG | - | chr3.1:75498714-75498733 | MS.gene049376:intron | 70.0% |
| AGGGGGCTGGAAGCCGCCAC+CGG | + | chr3.1:75498852-75498871 | None:intergenic | 75.0% | |
| TTTGGGTACGGGGGGGGGGG+GGG | - | chr3.1:75498715-75498734 | MS.gene049376:intron | 75.0% | |
| ! | TTGGGTACGGGGGGGGGGGG+GGG | - | chr3.1:75498716-75498735 | MS.gene049376:intron | 80.0% |
| ! | TGGGTACGGGGGGGGGGGGG+GGG | - | chr3.1:75498717-75498736 | MS.gene049376:intron | 85.0% |
| ! | GGGTACGGGGGGGGGGGGGG+GGG | - | chr3.1:75498718-75498737 | MS.gene049376:intron | 90.0% |
| ! | GGTACGGGGGGGGGGGGGGG+GGG | - | chr3.1:75498719-75498738 | MS.gene049376:intron | 90.0% |
| ! | GTACGGGGGGGGGGGGGGGG+GGG | - | chr3.1:75498720-75498739 | MS.gene049376:intron | 90.0% |
| ! | TACGGGGGGGGGGGGGGGGG+GGG | - | chr3.1:75498721-75498740 | MS.gene049376:intron | 90.0% |
| ! | ACGGGGGGGGGGGGGGGGGG+GGG | - | chr3.1:75498722-75498741 | MS.gene049376:intron | 95.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 75497447 | 75501028 | 75497447 | ID=MS.gene049376 |
| chr3.1 | mRNA | 75497447 | 75501028 | 75497447 | ID=MS.gene049376.t1;Parent=MS.gene049376 |
| chr3.1 | exon | 75500772 | 75501028 | 75500772 | ID=MS.gene049376.t1.exon1;Parent=MS.gene049376.t1 |
| chr3.1 | CDS | 75500772 | 75501028 | 75500772 | ID=cds.MS.gene049376.t1;Parent=MS.gene049376.t1 |
| chr3.1 | exon | 75499143 | 75499249 | 75499143 | ID=MS.gene049376.t1.exon2;Parent=MS.gene049376.t1 |
| chr3.1 | CDS | 75499143 | 75499249 | 75499143 | ID=cds.MS.gene049376.t1;Parent=MS.gene049376.t1 |
| chr3.1 | exon | 75497701 | 75497882 | 75497701 | ID=MS.gene049376.t1.exon3;Parent=MS.gene049376.t1 |
| chr3.1 | CDS | 75497701 | 75497882 | 75497701 | ID=cds.MS.gene049376.t1;Parent=MS.gene049376.t1 |
| chr3.1 | exon | 75497447 | 75497602 | 75497447 | ID=MS.gene049376.t1.exon4;Parent=MS.gene049376.t1 |
| chr3.1 | CDS | 75497447 | 75497602 | 75497447 | ID=cds.MS.gene049376.t1;Parent=MS.gene049376.t1 |
| Gene Sequence |
| Protein sequence |
