Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057605.t1 | XP_003613550.1 | 91.7 | 433 | 34 | 1 | 1 | 431 | 1 | 433 | 2.40E-172 | 615.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057605.t1 | G7K9N7 | 91.7 | 433 | 34 | 1 | 1 | 431 | 1 | 433 | 1.7e-172 | 615.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene057605 | MS.gene06433 | 0.807255 | 5.53E-50 | -1.69E-46 |
| MS.gene057605 | MS.gene065682 | 0.808335 | 3.26E-50 | -1.69E-46 |
| MS.gene057605 | MS.gene072847 | -0.814346 | 1.61E-51 | -1.69E-46 |
| MS.gene057605 | MS.gene074400 | 0.800969 | 1.12E-48 | -1.69E-46 |
| MS.gene057605 | MS.gene26792 | 0.809647 | 1.71E-50 | -1.69E-46 |
| MS.gene057605 | MS.gene30990 | 0.801978 | 6.98E-49 | -1.69E-46 |
| MS.gene057605 | MS.gene36309 | -0.820074 | 8.31E-53 | -1.69E-46 |
| MS.gene057605 | MS.gene47820 | -0.806508 | 7.95E-50 | -1.69E-46 |
| MS.gene057605 | MS.gene47821 | -0.806172 | 9.36E-50 | -1.69E-46 |
| MS.gene057605 | MS.gene47843 | -0.807842 | 4.15E-50 | -1.69E-46 |
| MS.gene057605 | MS.gene54146 | 0.807998 | 3.84E-50 | -1.69E-46 |
| MS.gene057605 | MS.gene62620 | 0.828932 | 6.83E-55 | -1.69E-46 |
| MS.gene057605 | MS.gene66653 | -0.80281 | 4.70E-49 | -1.69E-46 |
| MS.gene057605 | MS.gene75309 | 0.831226 | 1.88E-55 | -1.69E-46 |
| MS.gene057605 | MS.gene76479 | 0.806961 | 6.38E-50 | -1.69E-46 |
| MS.gene057605 | MS.gene76490 | -0.817226 | 3.68E-52 | -1.69E-46 |
| MS.gene057605 | MS.gene88707 | 0.828 | 1.15E-54 | -1.69E-46 |
| MS.gene057605 | MS.gene98032 | -0.801774 | 7.68E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057605.t1 | MTR_5g037960 | 97.460 | 433 | 9 | 1 | 1 | 431 | 1 | 433 | 0.0 | 860 |
| MS.gene057605.t1 | MTR_5g037970 | 61.745 | 149 | 28 | 1 | 51 | 199 | 13 | 132 | 1.15e-45 | 154 |
| MS.gene057605.t1 | MTR_1g037490 | 32.222 | 270 | 130 | 13 | 6 | 244 | 4 | 251 | 6.78e-13 | 71.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057605.t1 | AT1G27090 | 57.345 | 354 | 128 | 6 | 4 | 351 | 6 | 342 | 1.33e-130 | 383 |
| MS.gene057605.t1 | AT3G24690 | 63.889 | 72 | 25 | 1 | 8 | 78 | 4 | 75 | 1.61e-19 | 85.5 |
Find 144 sgRNAs with CRISPR-Local
Find 338 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATACTCAATTTGCTGTATTT+TGG | 0.108109 | 5.4:-27253080 | MS.gene057605:CDS |
| ACTCTCACGGGTTTCGTTCT+TGG | 0.172295 | 5.4:+27253166 | None:intergenic |
| GCAGCTGCTGCTGGAAATTA+TGG | 0.214893 | 5.4:-27252280 | MS.gene057605:CDS |
| TCCACCGGCGCCTTCATTTC+AGG | 0.238120 | 5.4:+27252310 | None:intergenic |
| GAGAGCGACAACGGAGGATT+TGG | 0.265418 | 5.4:+27253262 | None:intergenic |
| CACGGGTTTCGTTCTTGGTT+TGG | 0.274330 | 5.4:+27253171 | None:intergenic |
| TGCCAAGTTGTGGGTTTCTA+AGG | 0.287474 | 5.4:-27252832 | MS.gene057605:CDS |
| TTCCTTGGATAATAATTTCC+AGG | 0.314001 | 5.4:+27248765 | None:intergenic |
| TTCCAGGCTGGTCATGATAT+TGG | 0.314926 | 5.4:+27248781 | None:intergenic |
| GACCAATCCTCAGGGTGATT+TGG | 0.329600 | 5.4:-27248970 | MS.gene057605:CDS |
| CCAGTTCGAGTTCTTCAGTT+AGG | 0.331706 | 5.4:+27253198 | None:intergenic |
| TGATGATGCGACGGATCTGC+TGG | 0.342102 | 5.4:-27252961 | MS.gene057605:CDS |
| ACGGGTTTCGTTCTTGGTTT+GGG | 0.344247 | 5.4:+27253172 | None:intergenic |
| ATCATGTTGCAGGTGATGTT+GGG | 0.346961 | 5.4:-27248668 | MS.gene057605:CDS |
| GATGCGATCTCTGGTTTGTA+TGG | 0.350342 | 5.4:-27252924 | MS.gene057605:CDS |
| GACGCGGTGGAGGTGGTAGG+AGG | 0.358812 | 5.4:-27248869 | MS.gene057605:CDS |
| TGCTCCTTTCCCTCTCCATC+TGG | 0.363992 | 5.4:+27248936 | None:intergenic |
| TGATATTGGTTGCCACCATT+AGG | 0.368748 | 5.4:+27248795 | None:intergenic |
| CGCGGTGGAGGTGGTAGGAG+GGG | 0.378240 | 5.4:-27248867 | MS.gene057605:CDS |
| GATATTGGTTGCCACCATTA+GGG | 0.379116 | 5.4:+27248796 | None:intergenic |
| GAAGTTGCTGCAGCTGCTGC+TGG | 0.381590 | 5.4:-27252289 | MS.gene057605:CDS |
| CTGTTGTTATAATTGTTCCT+TGG | 0.383780 | 5.4:+27248750 | None:intergenic |
| CTTCTTGCTGCTCGCTGTTG+AGG | 0.386690 | 5.4:+27253294 | None:intergenic |
| TGTCGCTCTCATCGATGAAT+TGG | 0.391606 | 5.4:-27253249 | MS.gene057605:CDS |
| CAGTTCGAGTTCTTCAGTTA+GGG | 0.395876 | 5.4:+27253199 | None:intergenic |
| ACCTTCTGAAACTCTCCTTC+AGG | 0.402784 | 5.4:+27249120 | None:intergenic |
| AAGGATTTGGATGCGATCTC+TGG | 0.403514 | 5.4:-27252933 | MS.gene057605:CDS |
| ATCGTTCATTATACCTTCTC+AGG | 0.408040 | 5.4:+27252193 | None:intergenic |
| CAGCTGGGGTTTCACTCTCA+CGG | 0.413311 | 5.4:+27253153 | None:intergenic |
| TTCTTGCTGCTCGCTGTTGA+GGG | 0.418154 | 5.4:+27253295 | None:intergenic |
| TTCACCGCTCGGTCGCGGTT+CGG | 0.420082 | 5.4:+27253124 | None:intergenic |
| GGTCAAGTTAATCATGTTGC+AGG | 0.433886 | 5.4:-27248678 | MS.gene057605:CDS |
| AGCTGGGGTTTCACTCTCAC+GGG | 0.434948 | 5.4:+27253154 | None:intergenic |
| GCAGCTGCAGCAACTTCCAC+CGG | 0.436695 | 5.4:+27252295 | None:intergenic |
| CAGCTGCTGCTGGAAATTAT+GGG | 0.440177 | 5.4:-27252279 | MS.gene057605:CDS |
| TTACTTCAACGATGCTTACA+AGG | 0.451465 | 5.4:-27253025 | MS.gene057605:CDS |
| CACGGAGGCGTTTGTTGATG+AGG | 0.455824 | 5.4:+27253378 | None:intergenic |
| ACATCAACATTGGAATCAAT+AGG | 0.458047 | 5.4:+27252801 | None:intergenic |
| GGAGGTCGTGGTGGTGGCAG+AGG | 0.459751 | 5.4:-27248828 | MS.gene057605:CDS |
| CCGTCGGTGGTTGTTGAAGA+AGG | 0.466295 | 5.4:+27253413 | None:intergenic |
| TGTTGTAGATGCTGGTTTGA+GGG | 0.473403 | 5.4:-27252377 | MS.gene057605:intron |
| GGTCGTGGAGGTCGTGGTGG+TGG | 0.475042 | 5.4:-27248834 | MS.gene057605:CDS |
| AATTCTCAAGGACAAGGATC+TGG | 0.475451 | 5.4:-27249159 | MS.gene057605:CDS |
| TACGACTACTCCTGAAATGA+AGG | 0.481833 | 5.4:-27252320 | MS.gene057605:CDS |
| CGTGGTGGTGGCAGAGGAAG+AGG | 0.482332 | 5.4:-27248822 | MS.gene057605:CDS |
| AGAGGTGGACGCGGTGGAGG+TGG | 0.485228 | 5.4:-27248876 | MS.gene057605:CDS |
| TTGTTGTAGATGCTGGTTTG+AGG | 0.485495 | 5.4:-27252378 | MS.gene057605:intron |
| CCTAACTGAAGAACTCGAAC+TGG | 0.487871 | 5.4:-27253198 | MS.gene057605:CDS |
| TGAGGCTTCTGTTGAAGTGG+AGG | 0.492187 | 5.4:-27252230 | MS.gene057605:CDS |
| TTGGATAATAATTTCCAGGC+TGG | 0.492928 | 5.4:+27248769 | None:intergenic |
| TTCTGAGGCTTCTGTTGAAG+TGG | 0.493679 | 5.4:-27252233 | MS.gene057605:CDS |
| CAAAGAGGTGGACGCGGTGG+AGG | 0.494514 | 5.4:-27248879 | MS.gene057605:CDS |
| AGAGGAAGAGGTTACCCTAA+TGG | 0.498180 | 5.4:-27248810 | MS.gene057605:CDS |
| TGTGAAAAGCTCGAATCGGC+CGG | 0.504564 | 5.4:+27252885 | None:intergenic |
| TCAAATGGTCGTGGAGGTCG+TGG | 0.508125 | 5.4:-27248840 | MS.gene057605:CDS |
| TTCCAAATCACCCTGAGGAT+TGG | 0.511408 | 5.4:+27248968 | None:intergenic |
| ACATGAGCAGACCAATCCTC+AGG | 0.511425 | 5.4:-27248979 | MS.gene057605:CDS |
| AACAGAGGACGTGGAGGAAG+AGG | 0.513872 | 5.4:-27248732 | MS.gene057605:CDS |
| TGGGCTGTTGATTTCGAGAC+CGG | 0.515492 | 5.4:-27252904 | MS.gene057605:CDS |
| AATCATGTTGCAGGTGATGT+TGG | 0.517059 | 5.4:-27248669 | MS.gene057605:CDS |
| TACTACAGCAACCATGGTGC+AGG | 0.517209 | 5.4:-27248702 | MS.gene057605:CDS |
| GAGGCTTCTGTTGAAGTGGA+GGG | 0.522429 | 5.4:-27252229 | MS.gene057605:CDS |
| CATGGAAGAATCTCTCTCCC+AGG | 0.526241 | 5.4:-27253324 | MS.gene057605:CDS |
| CTTACATGTAACATCAACAT+TGG | 0.528743 | 5.4:+27252791 | None:intergenic |
| TATTGAGCATGCCAAGTTGT+GGG | 0.528833 | 5.4:-27252841 | MS.gene057605:CDS |
| GTGGACGCGGTGGAGGTGGT+AGG | 0.530530 | 5.4:-27248872 | MS.gene057605:CDS |
| GAGGATTGGTCTGCTCATGT+TGG | 0.531059 | 5.4:+27248982 | None:intergenic |
| TGAGCTTCTTGCGGAGTGCA+CGG | 0.532063 | 5.4:+27253360 | None:intergenic |
| ATGCGATCTCTGGTTTGTAT+GGG | 0.532706 | 5.4:-27252923 | MS.gene057605:CDS |
| TTCATCGATGAGAGCGACAA+CGG | 0.536126 | 5.4:+27253253 | None:intergenic |
| GGTGCCGGTGCACGGTTCTG+AGG | 0.537359 | 5.4:-27252248 | MS.gene057605:CDS |
| TTGGTCTGCTCATGTTGGAC+TGG | 0.537795 | 5.4:+27248987 | None:intergenic |
| ACGCGGTGGAGGTGGTAGGA+GGG | 0.538237 | 5.4:-27248868 | MS.gene057605:CDS |
| GATGATGCGACGGATCTGCT+GGG | 0.539375 | 5.4:-27252960 | MS.gene057605:CDS |
| AGCCTTAGAAACCCACAACT+TGG | 0.543512 | 5.4:+27252830 | None:intergenic |
| TCCTGAAATGAAGGCGCCGG+TGG | 0.544678 | 5.4:-27252311 | MS.gene057605:CDS |
| ATTCTTCCATGGAAGTGATA+CGG | 0.545735 | 5.4:+27253336 | None:intergenic |
| GTTGAATAAGATTATGTCGT+CGG | 0.549357 | 5.4:-27252350 | MS.gene057605:CDS |
| GGACGTGGAGGAAGAGGTGG+TGG | 0.557475 | 5.4:-27248726 | MS.gene057605:CDS |
| TCAGTTAGGGCTGAAGAAAG+TGG | 0.557872 | 5.4:+27253212 | None:intergenic |
| GGTAGGAGGGGTTATTCAAA+TGG | 0.558247 | 5.4:-27248855 | MS.gene057605:CDS |
| TTTGTTGATGAGGTTCAAGA+CGG | 0.565743 | 5.4:+27253388 | None:intergenic |
| GCTCAACCGTATCACTTCCA+TGG | 0.567322 | 5.4:-27253342 | MS.gene057605:CDS |
| AATTATAACAACAGAGGACG+TGG | 0.568910 | 5.4:-27248741 | MS.gene057605:CDS |
| TCAACCAGATGGAGAGGGAA+AGG | 0.569449 | 5.4:-27248940 | MS.gene057605:CDS |
| GTTCAAGACGGGTCCGTCGG+TGG | 0.569464 | 5.4:+27253400 | None:intergenic |
| AGCAGAAAATGCAGCAGAGG+CGG | 0.574303 | 5.4:-27249012 | MS.gene057605:CDS |
| GAAGGAACTGCAAATTCTCA+AGG | 0.574901 | 5.4:-27249171 | MS.gene057605:CDS |
| TTCTGATTCTCAGCCTGAGA+AGG | 0.580133 | 5.4:-27252206 | MS.gene057605:intron |
| AACCAATATCATGACCAGCC+TGG | 0.585533 | 5.4:-27248783 | MS.gene057605:CDS |
| GAAGCCTCAGAACCGTGCAC+CGG | 0.585641 | 5.4:+27252244 | None:intergenic |
| ATCAGTACTACCCTAGGAGG+GGG | 0.585668 | 5.4:-27248914 | MS.gene057605:CDS |
| TGAAAACAGCGATGTTGTTG+AGG | 0.585716 | 5.4:-27253105 | MS.gene057605:CDS |
| AGGGGTTATTCAAATGGTCG+TGG | 0.587046 | 5.4:-27248849 | MS.gene057605:CDS |
| CTTATGTGAAAAGCTCGAAT+CGG | 0.587319 | 5.4:+27252881 | None:intergenic |
| TTGTTGATGAGGTTCAAGAC+GGG | 0.589365 | 5.4:+27253389 | None:intergenic |
| AGCCTGGAAATTATTATCCA+AGG | 0.590589 | 5.4:-27248767 | MS.gene057605:CDS |
| CTGGGAGAGAGATTCTTCCA+TGG | 0.591735 | 5.4:+27253325 | None:intergenic |
| AGGAGCATCAGTACTACCCT+AGG | 0.594284 | 5.4:-27248920 | MS.gene057605:CDS |
| CAGAATCAAAGAGGTGGACG+CGG | 0.594472 | 5.4:-27248885 | MS.gene057605:CDS |
| GAGGTTCAAGACGGGTCCGT+CGG | 0.595281 | 5.4:+27253397 | None:intergenic |
| TTGGAATACAATCAACCAGA+TGG | 0.595382 | 5.4:-27248951 | MS.gene057605:CDS |
| GCATCAGTACTACCCTAGGA+GGG | 0.597546 | 5.4:-27248916 | MS.gene057605:CDS |
| ATGATGCGACGGATCTGCTG+GGG | 0.597582 | 5.4:-27252959 | MS.gene057605:CDS |
| CAGTACTACCCTAGGAGGGG+GGG | 0.599555 | 5.4:-27248912 | MS.gene057605:CDS |
| TACTCCTGAAATGAAGGCGC+CGG | 0.600256 | 5.4:-27252314 | MS.gene057605:CDS |
| AGAAGCAGAAAATGCAGCAG+AGG | 0.600401 | 5.4:-27249015 | MS.gene057605:CDS |
| ATCGATGAGAGCGACAACGG+AGG | 0.607537 | 5.4:+27253256 | None:intergenic |
| ATGGAAGAATCTCTCTCCCA+GGG | 0.608365 | 5.4:-27253323 | MS.gene057605:CDS |
| AGCATCAGTACTACCCTAGG+AGG | 0.610794 | 5.4:-27248917 | MS.gene057605:CDS |
| AGGATCTGGAGATGATCGGT+CGG | 0.610795 | 5.4:-27249145 | MS.gene057605:CDS |
| TCATGTTGCAGGTGATGTTG+GGG | 0.611983 | 5.4:-27248667 | MS.gene057605:CDS |
| AATCAAAGAGGTGGACGCGG+TGG | 0.615515 | 5.4:-27248882 | MS.gene057605:CDS |
| TACAGCAACCATGGTGCAGG+TGG | 0.616858 | 5.4:-27248699 | MS.gene057605:CDS |
| GACAAGGATCTGGAGATGAT+CGG | 0.618470 | 5.4:-27249149 | MS.gene057605:CDS |
| GATGATCGGTCGGATCCTGA+AGG | 0.621263 | 5.4:-27249135 | MS.gene057605:CDS |
| TCAGTACTACCCTAGGAGGG+GGG | 0.623179 | 5.4:-27248913 | MS.gene057605:CDS |
| TACAATCAACCAGATGGAGA+GGG | 0.626907 | 5.4:-27248945 | MS.gene057605:CDS |
| GTATTGAGCATGCCAAGTTG+TGG | 0.628732 | 5.4:-27252842 | MS.gene057605:CDS |
| GGTGGCTACTACAGCAACCA+TGG | 0.629551 | 5.4:-27248708 | MS.gene057605:CDS |
| AGAGGACGTGGAGGAAGAGG+TGG | 0.631238 | 5.4:-27248729 | MS.gene057605:CDS |
| AACTCCGAACCGCGACCGAG+CGG | 0.633799 | 5.4:-27253128 | MS.gene057605:CDS |
| ATACAATCAACCAGATGGAG+AGG | 0.639413 | 5.4:-27248946 | MS.gene057605:CDS |
| CTTACAAGGACACATGAGCG+TGG | 0.640484 | 5.4:-27253011 | MS.gene057605:CDS |
| TGATACGGTTGAGCTTCTTG+CGG | 0.648590 | 5.4:+27253351 | None:intergenic |
| AATGGTCGTGGAGGTCGTGG+TGG | 0.651782 | 5.4:-27248837 | MS.gene057605:CDS |
| CATGAGCAGACCAATCCTCA+GGG | 0.659746 | 5.4:-27248978 | MS.gene057605:CDS |
| GGAAGAGGTTACCCTAATGG+TGG | 0.659865 | 5.4:-27248807 | MS.gene057605:CDS |
| TGATGCGACGGATCTGCTGG+GGG | 0.660681 | 5.4:-27252958 | MS.gene057605:CDS |
| CCTTCTTCAACAACCACCGA+CGG | 0.661852 | 5.4:-27253413 | MS.gene057605:CDS |
| CGACAACGGAGGATTTGGAA+CGG | 0.662579 | 5.4:+27253267 | None:intergenic |
| CATCAGTACTACCCTAGGAG+GGG | 0.664883 | 5.4:-27248915 | MS.gene057605:CDS |
| TTACAAGGACACATGAGCGT+GGG | 0.667724 | 5.4:-27253010 | MS.gene057605:CDS |
| AGGAACAATTATAACAACAG+AGG | 0.669186 | 5.4:-27248747 | MS.gene057605:CDS |
| GGTTATCAGAATCAAAGAGG+TGG | 0.672400 | 5.4:-27248891 | MS.gene057605:CDS |
| TCCTGAAGGAGAGTTTCAGA+AGG | 0.675735 | 5.4:-27249121 | MS.gene057605:intron |
| ACTGCAAATTCTCAAGGACA+AGG | 0.678365 | 5.4:-27249165 | MS.gene057605:CDS |
| GGTTATTCAAATGGTCGTGG+AGG | 0.681935 | 5.4:-27248846 | MS.gene057605:CDS |
| TTGTATTCCAAATCACCCTG+AGG | 0.690365 | 5.4:+27248963 | None:intergenic |
| TTATGTGACTGATGATGCGA+CGG | 0.696062 | 5.4:-27252970 | MS.gene057605:CDS |
| TATAACAACAGAGGACGTGG+AGG | 0.699895 | 5.4:-27248738 | MS.gene057605:CDS |
| TAACTTGACCACCTGCACCA+TGG | 0.712629 | 5.4:+27248691 | None:intergenic |
| TTTCACATAAGAATGCGTTG+AGG | 0.712994 | 5.4:-27252869 | MS.gene057605:CDS |
| GCTTCTTGCGGAGTGCACGG+AGG | 0.747390 | 5.4:+27253363 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTATATATTTATTATGTTG+TGG | - | chr5.4:27251852-27251871 | MS.gene057605:intron | 10.0% |
| !! | TATAAAAATATGATAAATCT+AGG | + | chr5.4:27251903-27251922 | None:intergenic | 10.0% |
| !! | AATATACACTTAACAATTTA+AGG | + | chr5.4:27252611-27252630 | None:intergenic | 15.0% |
| !! | ATATATATTTGTGACTTTAT+AGG | - | chr5.4:27251667-27251686 | MS.gene057605:intron | 15.0% |
| !! | GGTTTAAAAAAAATTAAACA+TGG | - | chr5.4:27252786-27252805 | MS.gene057605:intron | 15.0% |
| !! | TGAGATAAAAATTCAAATAA+AGG | + | chr5.4:27251744-27251763 | None:intergenic | 15.0% |
| !! | TTTATTAATTAATGTCTAAG+AGG | - | chr5.4:27251805-27251824 | MS.gene057605:intron | 15.0% |
| !!! | AAATGTTTTCACAAAATAAA+CGG | + | chr5.4:27250169-27250188 | None:intergenic | 15.0% |
| !!! | ATAAAAATAGTATGTAGTTT+TGG | + | chr5.4:27251790-27251809 | None:intergenic | 15.0% |
| !!! | GTAAAGTTATCATAAATTTT+AGG | - | chr5.4:27250376-27250395 | MS.gene057605:intron | 15.0% |
| !!! | TGAATTTTTATTCATTTTCT+GGG | - | chr5.4:27249345-27249364 | MS.gene057605:intron | 15.0% |
| !!! | TTGAATTTTTATTCATTTTC+TGG | - | chr5.4:27249344-27249363 | MS.gene057605:intron | 15.0% |
| !!! | TTTTATTGATGATTAGTATT+TGG | - | chr5.4:27249665-27249684 | MS.gene057605:intron | 15.0% |
| !!! | TTTTTTGAAGTTTTATTGTT+TGG | - | chr5.4:27249919-27249938 | MS.gene057605:intron | 15.0% |
| !! | AAATGATTTCACAAAGTAAA+TGG | - | chr5.4:27250412-27250431 | MS.gene057605:intron | 20.0% |
| !! | CATGTTAATATCCAAATTAT+AGG | - | chr5.4:27250125-27250144 | MS.gene057605:intron | 20.0% |
| !! | TATTGTTTGGTTGAATTATT+TGG | - | chr5.4:27249932-27249951 | MS.gene057605:intron | 20.0% |
| !!! | ATTTGTTTTGATTGTTGATT+TGG | - | chr5.4:27249508-27249527 | MS.gene057605:intron | 20.0% |
| !!! | ATTTTTATTGATGGTTTGAA+GGG | - | chr5.4:27251995-27252014 | MS.gene057605:intron | 20.0% |
| !!! | CTTTTAATAAAATTTTCCCA+AGG | + | chr5.4:27251210-27251229 | None:intergenic | 20.0% |
| !!! | TAAGTTAGAATACAACTTTT+AGG | + | chr5.4:27250205-27250224 | None:intergenic | 20.0% |
| !!! | TTTCTGACTTTTTGATTTTA+GGG | - | chr5.4:27249309-27249328 | MS.gene057605:intron | 20.0% |
| !!! | TTTGTTTTGATTGTTGATTT+GGG | - | chr5.4:27249509-27249528 | MS.gene057605:intron | 20.0% |
| !!! | TTTTCTGACTTTTTGATTTT+AGG | - | chr5.4:27249308-27249327 | MS.gene057605:intron | 20.0% |
| ! | ACATTAGAGAAGCAAATTAA+TGG | + | chr5.4:27250751-27250770 | None:intergenic | 25.0% |
| ! | ATAATCAATCTCACTTTCAT+TGG | - | chr5.4:27252321-27252340 | MS.gene057605:CDS | 25.0% |
| ! | ATACACTTAACAATTTAAGG+AGG | + | chr5.4:27252608-27252627 | None:intergenic | 25.0% |
| ! | ATCAAAGAACACAAAAAACT+TGG | + | chr5.4:27252815-27252834 | None:intergenic | 25.0% |
| ! | ATCAGTAAGAAATAGAAAAC+AGG | + | chr5.4:27251289-27251308 | None:intergenic | 25.0% |
| ! | ATTAGATATAGGACTTAAGA+GGG | - | chr5.4:27252105-27252124 | MS.gene057605:intron | 25.0% |
| ! | ATTTGGATATTAACATGTGA+TGG | + | chr5.4:27250122-27250141 | None:intergenic | 25.0% |
| ! | CAGTAAATAATAAGTTCACA+AGG | + | chr5.4:27252547-27252566 | None:intergenic | 25.0% |
| ! | CATATCACATTCCTATAATT+TGG | + | chr5.4:27250139-27250158 | None:intergenic | 25.0% |
| ! | CTATCTTCAAATATATGTGT+TGG | - | chr5.4:27251457-27251476 | MS.gene057605:intron | 25.0% |
| ! | GATGGTAAAAATGAGATTAT+TGG | - | chr5.4:27250068-27250087 | MS.gene057605:intron | 25.0% |
| ! | TAATTGTGACCATCAATTTA+TGG | - | chr5.4:27252285-27252304 | MS.gene057605:CDS | 25.0% |
| ! | TACAATGTTTACAAAACCTT+GGG | - | chr5.4:27251191-27251210 | MS.gene057605:intron | 25.0% |
| ! | TATATTTGAAGATAGTCACA+AGG | + | chr5.4:27251452-27251471 | None:intergenic | 25.0% |
| ! | TCATAATAAGTGATAAACTC+AGG | + | chr5.4:27252635-27252654 | None:intergenic | 25.0% |
| ! | TGAATTATTTGGATATCTGA+TGG | - | chr5.4:27249943-27249962 | MS.gene057605:intron | 25.0% |
| ! | TGGAAATGATGATTAGATAT+AGG | - | chr5.4:27252094-27252113 | MS.gene057605:intron | 25.0% |
| ! | TGGCTGAAATACATTTAATA+CGG | + | chr5.4:27252413-27252432 | None:intergenic | 25.0% |
| ! | TTATTGGATGAAATTGCATT+TGG | - | chr5.4:27250084-27250103 | MS.gene057605:intron | 25.0% |
| ! | TTCATTCTACAAAATGCATA+TGG | + | chr5.4:27252887-27252906 | None:intergenic | 25.0% |
| !! | AAAAACCATTTGTTAGTGTT+GGG | - | chr5.4:27252474-27252493 | MS.gene057605:intron | 25.0% |
| !! | AATTGATGTTGTATTTCTGT+TGG | - | chr5.4:27251480-27251499 | MS.gene057605:intron | 25.0% |
| !! | ATATGCATTTTGTAGAATGA+AGG | - | chr5.4:27252886-27252905 | MS.gene057605:CDS | 25.0% |
| !! | ATCATCAGCATTAGTTTATT+TGG | - | chr5.4:27250545-27250564 | MS.gene057605:intron | 25.0% |
| !! | ATTGATGTTGTATTTCTGTT+GGG | - | chr5.4:27251481-27251500 | MS.gene057605:intron | 25.0% |
| !! | CATCAATACTAAATTTTTCC+AGG | + | chr5.4:27250873-27250892 | None:intergenic | 25.0% |
| !! | GCTAAAAAAGTATAACACAT+AGG | + | chr5.4:27252855-27252874 | None:intergenic | 25.0% |
| !!! | AAATAGTATGTAGTTTTGGT+TGG | + | chr5.4:27251786-27251805 | None:intergenic | 25.0% |
| !!! | AGAAAAGTCATGTTTTGAAA+TGG | + | chr5.4:27251592-27251611 | None:intergenic | 25.0% |
| !!! | ATACTCAATTTGCTGTATTT+TGG | - | chr5.4:27248995-27249014 | MS.gene057605:CDS | 25.0% |
| !!! | ATGTTTTGATTGTTGATGTA+GGG | - | chr5.4:27249432-27249451 | MS.gene057605:intron | 25.0% |
| !!! | CATTTTTATTGATGGTTTGA+AGG | - | chr5.4:27251994-27252013 | MS.gene057605:intron | 25.0% |
| !!! | TAACACATAGGAATTTGTTT+TGG | + | chr5.4:27252843-27252862 | None:intergenic | 25.0% |
| !!! | TACTCAATTTGCTGTATTTT+GGG | - | chr5.4:27248996-27249015 | MS.gene057605:CDS | 25.0% |
| !!! | TGTTTTCTATTTCTTACTGA+TGG | - | chr5.4:27251288-27251307 | MS.gene057605:intron | 25.0% |
| !!! | TTGATTTTGATTGTTGATGT+GGG | - | chr5.4:27249587-27249606 | MS.gene057605:intron | 25.0% |
| !!! | TTGTAGTTTTACAAGTTTGA+GGG | - | chr5.4:27250628-27250647 | MS.gene057605:intron | 25.0% |
| !!! | TTGTTTTGATTGTTGATTTG+GGG | - | chr5.4:27249510-27249529 | MS.gene057605:intron | 25.0% |
| !!! | TTTGTAGTTTTACAAGTTTG+AGG | - | chr5.4:27250627-27250646 | MS.gene057605:intron | 25.0% |
| AAAGAACACAAAAAACTTGG+CGG | + | chr5.4:27252812-27252831 | None:intergenic | 30.0% | |
| ACATCAACATTGGAATCAAT+AGG | + | chr5.4:27249277-27249296 | None:intergenic | 30.0% | |
| AGAAGATGAAATGCTAGTTA+AGG | - | chr5.4:27250258-27250277 | MS.gene057605:intron | 30.0% | |
| AGGAACAATTATAACAACAG+AGG | - | chr5.4:27253328-27253347 | MS.gene057605:CDS | 30.0% | |
| ATACACACAAACATACCTAA+TGG | + | chr5.4:27252358-27252377 | None:intergenic | 30.0% | |
| ATCATGCATTCTTCAATCAT+AGG | + | chr5.4:27251245-27251264 | None:intergenic | 30.0% | |
| ATTGAAGAATGCATGATTAG+AGG | - | chr5.4:27251248-27251267 | MS.gene057605:intron | 30.0% | |
| CAATGTTGATGTTACATGTA+AGG | - | chr5.4:27249285-27249304 | MS.gene057605:intron | 30.0% | |
| CATTGTGGATATGAATTTGA+AGG | - | chr5.4:27250722-27250741 | MS.gene057605:intron | 30.0% | |
| CGAATATCCAAATAACAGAA+AGG | + | chr5.4:27250016-27250035 | None:intergenic | 30.0% | |
| CTACAATGTTTACAAAACCT+TGG | - | chr5.4:27251190-27251209 | MS.gene057605:intron | 30.0% | |
| CTGTTGTTATAATTGTTCCT+TGG | + | chr5.4:27253328-27253347 | None:intergenic | 30.0% | |
| CTTACATGTAACATCAACAT+TGG | + | chr5.4:27249287-27249306 | None:intergenic | 30.0% | |
| GATTAGATATAGGACTTAAG+AGG | - | chr5.4:27252104-27252123 | MS.gene057605:intron | 30.0% | |
| GTTGAATAAGATTATGTCGT+CGG | - | chr5.4:27249725-27249744 | MS.gene057605:intron | 30.0% | |
| TATAGGAATGTGATATGTCA+GGG | - | chr5.4:27250142-27250161 | MS.gene057605:intron | 30.0% | |
| TATGTTTAATGTCTGTTGGA+TGG | - | chr5.4:27250050-27250069 | MS.gene057605:intron | 30.0% | |
| TATTTGGATATTCGTTAGGA+TGG | - | chr5.4:27250022-27250041 | MS.gene057605:intron | 30.0% | |
| TCAGTATGTTTAATGTCTGT+TGG | - | chr5.4:27250046-27250065 | MS.gene057605:intron | 30.0% | |
| TCTAGACATTTCAAATGCTA+GGG | + | chr5.4:27251072-27251091 | None:intergenic | 30.0% | |
| TTAATTTCTGTCATAGAGCA+TGG | + | chr5.4:27252268-27252287 | None:intergenic | 30.0% | |
| TTATAGGAATGTGATATGTC+AGG | - | chr5.4:27250141-27250160 | MS.gene057605:intron | 30.0% | |
| TTCCTTGGATAATAATTTCC+AGG | + | chr5.4:27253313-27253332 | None:intergenic | 30.0% | |
| TTTAAACCAAATGCAGAAAC+AGG | + | chr5.4:27252774-27252793 | None:intergenic | 30.0% | |
| ! | AGATATGCAAACATTTTTCC+AGG | + | chr5.4:27251377-27251396 | None:intergenic | 30.0% |
| ! | ATTGTATAACTTTTGCTACG+TGG | + | chr5.4:27252433-27252452 | None:intergenic | 30.0% |
| ! | CAAAAACCATTTGTTAGTGT+TGG | - | chr5.4:27252473-27252492 | MS.gene057605:intron | 30.0% |
| ! | CTGTTATTTGGATATTCGTT+AGG | - | chr5.4:27250018-27250037 | MS.gene057605:intron | 30.0% |
| ! | GTTAGAACTCTTTTATCAGA+AGG | - | chr5.4:27250588-27250607 | MS.gene057605:intron | 30.0% |
| ! | TAGCATTTGAAATGTCTAGA+GGG | - | chr5.4:27251072-27251091 | MS.gene057605:intron | 30.0% |
| ! | TATATGTTTGCTGCATAATC+TGG | - | chr5.4:27251715-27251734 | MS.gene057605:intron | 30.0% |
| ! | TGATTTTTCTCAAATAAGCC+TGG | - | chr5.4:27251356-27251375 | MS.gene057605:intron | 30.0% |
| !! | GTGAGCATCATTTTTATTGA+TGG | - | chr5.4:27251986-27252005 | MS.gene057605:intron | 30.0% |
| !! | TGTAGTTTTACAAGTTTGAG+GGG | - | chr5.4:27250629-27250648 | MS.gene057605:intron | 30.0% |
| !!! | ATGATTAGAGGTTTTGACTT+TGG | - | chr5.4:27251260-27251279 | MS.gene057605:intron | 30.0% |
| !!! | GATGTTTTGATTGTTGATGT+AGG | - | chr5.4:27249431-27249450 | MS.gene057605:intron | 30.0% |
| !!! | GGGTTTTGATTGTTGATTTA+GGG | - | chr5.4:27249365-27249384 | MS.gene057605:intron | 30.0% |
| !!! | GTTGATTTTGATTGTTGATG+TGG | - | chr5.4:27249586-27249605 | MS.gene057605:intron | 30.0% |
| !!! | TGATTTTGATTGTTGATGTG+GGG | - | chr5.4:27249588-27249607 | MS.gene057605:intron | 30.0% |
| !!! | TGGGTTTTGATTGTTGATTT+AGG | - | chr5.4:27249364-27249383 | MS.gene057605:intron | 30.0% |
| AAGAACACTACACAACAGTT+AGG | + | chr5.4:27250493-27250512 | None:intergenic | 35.0% | |
| AATTATAACAACAGAGGACG+TGG | - | chr5.4:27253334-27253353 | MS.gene057605:CDS | 35.0% | |
| AATTTAAGGAGGAGGTGAAA+GGG | + | chr5.4:27252597-27252616 | None:intergenic | 35.0% | |
| AGATAAATTTGACGTGTTGC+AGG | - | chr5.4:27250985-27251004 | MS.gene057605:intron | 35.0% | |
| AGCCTGGAAATTATTATCCA+AGG | - | chr5.4:27253308-27253327 | MS.gene057605:CDS | 35.0% | |
| AGTAGGATAGAAATCACATC+AGG | + | chr5.4:27252735-27252754 | None:intergenic | 35.0% | |
| ATAAATTTGACGTGTTGCAG+GGG | - | chr5.4:27250987-27251006 | MS.gene057605:intron | 35.0% | |
| ATCGTTCATTATACCTTCTC+AGG | + | chr5.4:27249885-27249904 | None:intergenic | 35.0% | |
| ATTCTTCCATGGAAGTGATA+CGG | + | chr5.4:27248742-27248761 | None:intergenic | 35.0% | |
| ATTGATGGAAATGGACAGAA+TGG | + | chr5.4:27250465-27250484 | None:intergenic | 35.0% | |
| CAACGATTATGCACTTACAA+AGG | + | chr5.4:27252029-27252048 | None:intergenic | 35.0% | |
| CAATACGCACCATAAATTGA+TGG | + | chr5.4:27252297-27252316 | None:intergenic | 35.0% | |
| CACTTAACAATTTAAGGAGG+AGG | + | chr5.4:27252605-27252624 | None:intergenic | 35.0% | |
| CGAAATGGAATGAAATGTCA+GGG | + | chr5.4:27250440-27250459 | None:intergenic | 35.0% | |
| CTCTAGACATTTCAAATGCT+AGG | + | chr5.4:27251073-27251092 | None:intergenic | 35.0% | |
| CTTATGTGAAAAGCTCGAAT+CGG | + | chr5.4:27249197-27249216 | None:intergenic | 35.0% | |
| GAAGAACTTGAAGAAAGAGT+AGG | + | chr5.4:27252752-27252771 | None:intergenic | 35.0% | |
| GATAAATTTGACGTGTTGCA+GGG | - | chr5.4:27250986-27251005 | MS.gene057605:intron | 35.0% | |
| TCGAAATGGAATGAAATGTC+AGG | + | chr5.4:27250441-27250460 | None:intergenic | 35.0% | |
| TCTAGAGGGATTACTACTAA+TGG | - | chr5.4:27251086-27251105 | MS.gene057605:intron | 35.0% | |
| TGATGGTATTGCTTTACATG+TGG | - | chr5.4:27251305-27251324 | MS.gene057605:intron | 35.0% | |
| TGGAATAATGTAGAGTGTGA+TGG | - | chr5.4:27249985-27250004 | MS.gene057605:intron | 35.0% | |
| TTACTTCAACGATGCTTACA+AGG | - | chr5.4:27249050-27249069 | MS.gene057605:intron | 35.0% | |
| TTGGAATACAATCAACCAGA+TGG | - | chr5.4:27253124-27253143 | MS.gene057605:CDS | 35.0% | |
| TTGGATAATAATTTCCAGGC+TGG | + | chr5.4:27253309-27253328 | None:intergenic | 35.0% | |
| TTTCACATAAGAATGCGTTG+AGG | - | chr5.4:27249206-27249225 | MS.gene057605:intron | 35.0% | |
| ! | AACAGTTAGGTATGGATTGA+TGG | + | chr5.4:27250480-27250499 | None:intergenic | 35.0% |
| ! | CTAGCATTTGAAATGTCTAG+AGG | - | chr5.4:27251071-27251090 | MS.gene057605:intron | 35.0% |
| ! | GTGAAGACTATTTGAAGTGT+AGG | - | chr5.4:27250780-27250799 | MS.gene057605:intron | 35.0% |
| ! | GTTGTATTTCTGTTGGGTTT+AGG | - | chr5.4:27251487-27251506 | MS.gene057605:intron | 35.0% |
| ! | TAGGTATGGATTGATGGAAA+TGG | + | chr5.4:27250474-27250493 | None:intergenic | 35.0% |
| ! | TGGAAATTATGGGTCTTTTC+AGG | - | chr5.4:27249806-27249825 | MS.gene057605:intron | 35.0% |
| ! | TTTGTTGATGAGGTTCAAGA+CGG | + | chr5.4:27248690-27248709 | None:intergenic | 35.0% |
| ! | TTTTCCAGGTTTCAAGAGAA+AGG | + | chr5.4:27250859-27250878 | None:intergenic | 35.0% |
| !! | AGAGTGGCATATAACTTGTT+AGG | - | chr5.4:27252200-27252219 | MS.gene057605:intron | 35.0% |
| !! | ATGTGGGGATTTTGTTTGTA+GGG | - | chr5.4:27249603-27249622 | MS.gene057605:intron | 35.0% |
| !! | GTTTTGTTAGTGTTGTTCAC+TGG | - | chr5.4:27250520-27250539 | MS.gene057605:intron | 35.0% |
| !! | TGATTTGGGGTTTAGTCTTA+GGG | - | chr5.4:27249523-27249542 | MS.gene057605:intron | 35.0% |
| !! | TTGATTTGGGGTTTAGTCTT+AGG | - | chr5.4:27249522-27249541 | MS.gene057605:intron | 35.0% |
| !!! | GTTTTTGTTGTTGTAGATGC+TGG | - | chr5.4:27249690-27249709 | MS.gene057605:intron | 35.0% |
| !!! | TAAAGTTTTTTCTCTCTCGC+AGG | - | chr5.4:27253030-27253049 | MS.gene057605:CDS | 35.0% |
| !!! | TATGTAGTTTTGGTTGGATG+CGG | + | chr5.4:27251780-27251799 | None:intergenic | 35.0% |
| AAGACACGTTAACCTAATGC+AGG | + | chr5.4:27252180-27252199 | None:intergenic | 40.0% | |
| AATCATGTTGCAGGTGATGT+TGG | - | chr5.4:27253406-27253425 | MS.gene057605:CDS | 40.0% | |
| AATTCTCAAGGACAAGGATC+TGG | - | chr5.4:27252916-27252935 | MS.gene057605:CDS | 40.0% | |
| ACCTAAGGTTAGAGTCATTG+TGG | - | chr5.4:27250707-27250726 | MS.gene057605:intron | 40.0% | |
| ACTGCAAATTCTCAAGGACA+AGG | - | chr5.4:27252910-27252929 | MS.gene057605:CDS | 40.0% | |
| ACTTCCTTTCTCTTGAAACC+TGG | - | chr5.4:27250852-27250871 | MS.gene057605:intron | 40.0% | |
| ACTTTACACACACACAACAC+TGG | - | chr5.4:27252233-27252252 | MS.gene057605:CDS | 40.0% | |
| AGGATAGAACACTTGTGAGT+TGG | + | chr5.4:27252153-27252172 | None:intergenic | 40.0% | |
| ATACAATCAACCAGATGGAG+AGG | - | chr5.4:27253129-27253148 | MS.gene057605:CDS | 40.0% | |
| ATCATGTTGCAGGTGATGTT+GGG | - | chr5.4:27253407-27253426 | MS.gene057605:CDS | 40.0% | |
| ATGGACAGAATGGATCGAAA+TGG | + | chr5.4:27250455-27250474 | None:intergenic | 40.0% | |
| ATTCCTCAGCTACATACCTA+AGG | - | chr5.4:27250692-27250711 | MS.gene057605:intron | 40.0% | |
| CAATTTAAGGAGGAGGTGAA+AGG | + | chr5.4:27252598-27252617 | None:intergenic | 40.0% | |
| CACTACACAACAGTTAGGTA+TGG | + | chr5.4:27250488-27250507 | None:intergenic | 40.0% | |
| GAAGGAACTGCAAATTCTCA+AGG | - | chr5.4:27252904-27252923 | MS.gene057605:CDS | 40.0% | |
| GATGTAGGGTTTGTGTTTGT+AGG | - | chr5.4:27249446-27249465 | MS.gene057605:intron | 40.0% | |
| GGAGTTGCCTTTCTGTTATT+TGG | - | chr5.4:27250006-27250025 | MS.gene057605:intron | 40.0% | |
| GGTCAAGTTAATCATGTTGC+AGG | - | chr5.4:27253397-27253416 | MS.gene057605:CDS | 40.0% | |
| GGTTATCAGAATCAAAGAGG+TGG | - | chr5.4:27253184-27253203 | MS.gene057605:CDS | 40.0% | |
| TAAATTTGACGTGTTGCAGG+GGG | - | chr5.4:27250988-27251007 | MS.gene057605:intron | 40.0% | |
| TAACCTTAGGTATGTAGCTG+AGG | + | chr5.4:27250698-27250717 | None:intergenic | 40.0% | |
| TACAATCAACCAGATGGAGA+GGG | - | chr5.4:27253130-27253149 | MS.gene057605:CDS | 40.0% | |
| TACGACTACTCCTGAAATGA+AGG | - | chr5.4:27249755-27249774 | MS.gene057605:intron | 40.0% | |
| TAGGTTAACGTGTCTTAGAG+TGG | - | chr5.4:27252184-27252203 | MS.gene057605:intron | 40.0% | |
| TATTGAGCATGCCAAGTTGT+GGG | - | chr5.4:27249234-27249253 | MS.gene057605:intron | 40.0% | |
| TCCACAATGACTCTAACCTT+AGG | + | chr5.4:27250711-27250730 | None:intergenic | 40.0% | |
| TGAAAACAGCGATGTTGTTG+AGG | - | chr5.4:27248970-27248989 | MS.gene057605:CDS | 40.0% | |
| TGCATGTGACTTTGTAAGTC+TGG | - | chr5.4:27252049-27252068 | MS.gene057605:intron | 40.0% | |
| TTGTATTCCAAATCACCCTG+AGG | + | chr5.4:27253115-27253134 | None:intergenic | 40.0% | |
| ! | AACCATTTGTTAGTGTTGGG+AGG | - | chr5.4:27252477-27252496 | MS.gene057605:intron | 40.0% |
| ! | ACCATTTGTTAGTGTTGGGA+GGG | - | chr5.4:27252478-27252497 | MS.gene057605:intron | 40.0% |
| ! | AGTTTTACAAGTTTGAGGGG+TGG | - | chr5.4:27250632-27250651 | MS.gene057605:intron | 40.0% |
| ! | ATGCGATCTCTGGTTTGTAT+GGG | - | chr5.4:27249152-27249171 | MS.gene057605:CDS | 40.0% |
| ! | CAGTTCGAGTTCTTCAGTTA+GGG | + | chr5.4:27248879-27248898 | None:intergenic | 40.0% |
| ! | GATATTGGTTGCCACCATTA+GGG | + | chr5.4:27253282-27253301 | None:intergenic | 40.0% |
| ! | GTTTTACAAGTTTGAGGGGT+GGG | - | chr5.4:27250633-27250652 | MS.gene057605:intron | 40.0% |
| ! | TGATATTGGTTGCCACCATT+AGG | + | chr5.4:27253283-27253302 | None:intergenic | 40.0% |
| ! | TTATGTGACTGATGATGCGA+CGG | - | chr5.4:27249105-27249124 | MS.gene057605:intron | 40.0% |
| ! | TTCATCATCTTTTCCTCAGC+AGG | + | chr5.4:27252390-27252409 | None:intergenic | 40.0% |
| ! | TTGTTGATGAGGTTCAAGAC+GGG | + | chr5.4:27248689-27248708 | None:intergenic | 40.0% |
| !! | GATGTGGGGATTTTGTTTGT+AGG | - | chr5.4:27249602-27249621 | MS.gene057605:intron | 40.0% |
| !! | GGGTTTAGTCTTAGGGTTTA+TGG | - | chr5.4:27249530-27249549 | MS.gene057605:intron | 40.0% |
| !! | GTTCTTCCTGTTTCTGCATT+TGG | - | chr5.4:27252765-27252784 | MS.gene057605:intron | 40.0% |
| !! | TGTTGTAGATGCTGGTTTGA+GGG | - | chr5.4:27249698-27249717 | MS.gene057605:intron | 40.0% |
| !! | TTGTTGTAGATGCTGGTTTG+AGG | - | chr5.4:27249697-27249716 | MS.gene057605:intron | 40.0% |
| AAATTTGACGTGTTGCAGGG+GGG | - | chr5.4:27250989-27251008 | MS.gene057605:intron | 45.0% | |
| AACCAATATCATGACCAGCC+TGG | - | chr5.4:27253292-27253311 | MS.gene057605:CDS | 45.0% | |
| AAGGATTTGGATGCGATCTC+TGG | - | chr5.4:27249142-27249161 | MS.gene057605:CDS | 45.0% | |
| ACCCTCCCAACACTAACAAA+TGG | + | chr5.4:27252482-27252501 | None:intergenic | 45.0% | |
| ACGGGTTTCGTTCTTGGTTT+GGG | + | chr5.4:27248906-27248925 | None:intergenic | 45.0% | |
| AGAAGCAGAAAATGCAGCAG+AGG | - | chr5.4:27253060-27253079 | MS.gene057605:CDS | 45.0% | |
| AGAGGAAGAGGTTACCCTAA+TGG | - | chr5.4:27253265-27253284 | MS.gene057605:CDS | 45.0% | |
| AGCCTTAGAAACCCACAACT+TGG | + | chr5.4:27249248-27249267 | None:intergenic | 45.0% | |
| AGGGGTTATTCAAATGGTCG+TGG | - | chr5.4:27253226-27253245 | MS.gene057605:CDS | 45.0% | |
| ATGGAAGAATCTCTCTCCCA+GGG | - | chr5.4:27248752-27248771 | MS.gene057605:CDS | 45.0% | |
| CACAAACATACCTAATGGCG+CGG | + | chr5.4:27252353-27252372 | None:intergenic | 45.0% | |
| CACGTTAACCTAATGCAGGA+AGG | + | chr5.4:27252176-27252195 | None:intergenic | 45.0% | |
| CAGCTGCTGCTGGAAATTAT+GGG | - | chr5.4:27249796-27249815 | MS.gene057605:intron | 45.0% | |
| CCTAACTGAAGAACTCGAAC+TGG | - | chr5.4:27248877-27248896 | MS.gene057605:CDS | 45.0% | |
| GACAAGGATCTGGAGATGAT+CGG | - | chr5.4:27252926-27252945 | MS.gene057605:CDS | 45.0% | |
| GATGGAGAGCGACATTGAAT+GGG | - | chr5.4:27249961-27249980 | MS.gene057605:intron | 45.0% | |
| GGGGGTTATCAGAATCAAAG+AGG | - | chr5.4:27253181-27253200 | MS.gene057605:CDS | 45.0% | |
| GGTAGGAGGGGTTATTCAAA+TGG | - | chr5.4:27253220-27253239 | MS.gene057605:CDS | 45.0% | |
| GGTTATTCAAATGGTCGTGG+AGG | - | chr5.4:27253229-27253248 | MS.gene057605:CDS | 45.0% | |
| GTATTGAGCATGCCAAGTTG+TGG | - | chr5.4:27249233-27249252 | MS.gene057605:intron | 45.0% | |
| GTTAACCTAATGCAGGAAGG+AGG | + | chr5.4:27252173-27252192 | None:intergenic | 45.0% | |
| TATAACAACAGAGGACGTGG+AGG | - | chr5.4:27253337-27253356 | MS.gene057605:CDS | 45.0% | |
| TCAGTTAGGGCTGAAGAAAG+TGG | + | chr5.4:27248866-27248885 | None:intergenic | 45.0% | |
| TCATGTTGCAGGTGATGTTG+GGG | - | chr5.4:27253408-27253427 | MS.gene057605:CDS | 45.0% | |
| TCCTGAAGGAGAGTTTCAGA+AGG | - | chr5.4:27252954-27252973 | MS.gene057605:CDS | 45.0% | |
| TCTATCCTCCTTCCTGCATT+AGG | - | chr5.4:27252165-27252184 | MS.gene057605:intron | 45.0% | |
| TGATACGGTTGAGCTTCTTG+CGG | + | chr5.4:27248727-27248746 | None:intergenic | 45.0% | |
| TGATGGAGAGCGACATTGAA+TGG | - | chr5.4:27249960-27249979 | MS.gene057605:intron | 45.0% | |
| TGCCAAGTTGTGGGTTTCTA+AGG | - | chr5.4:27249243-27249262 | MS.gene057605:intron | 45.0% | |
| TGTCGCTCTCATCGATGAAT+TGG | - | chr5.4:27248826-27248845 | MS.gene057605:CDS | 45.0% | |
| TTACAAGGACACATGAGCGT+GGG | - | chr5.4:27249065-27249084 | MS.gene057605:intron | 45.0% | |
| TTACACACACACAACACTGG+TGG | - | chr5.4:27252236-27252255 | MS.gene057605:CDS | 45.0% | |
| TTCATCGATGAGAGCGACAA+CGG | + | chr5.4:27248825-27248844 | None:intergenic | 45.0% | |
| TTCCAAATCACCCTGAGGAT+TGG | + | chr5.4:27253110-27253129 | None:intergenic | 45.0% | |
| TTCTGATTCTCAGCCTGAGA+AGG | - | chr5.4:27249869-27249888 | MS.gene057605:intron | 45.0% | |
| ! | CCAGTTCGAGTTCTTCAGTT+AGG | + | chr5.4:27248880-27248899 | None:intergenic | 45.0% |
| ! | GATGCGATCTCTGGTTTGTA+TGG | - | chr5.4:27249151-27249170 | MS.gene057605:CDS | 45.0% |
| ! | TTCCAGGCTGGTCATGATAT+TGG | + | chr5.4:27253297-27253316 | None:intergenic | 45.0% |
| !! | ACCTTCTGAAACTCTCCTTC+AGG | + | chr5.4:27252958-27252977 | None:intergenic | 45.0% |
| !! | GTATTAGAAAGCACCTGCTG+AGG | - | chr5.4:27252374-27252393 | MS.gene057605:intron | 45.0% |
| !! | TGGGAGGGTACTTAGATGTT+AGG | - | chr5.4:27252493-27252512 | MS.gene057605:intron | 45.0% |
| !! | TTAAGAGGGTACCCTACATG+TGG | - | chr5.4:27252119-27252138 | MS.gene057605:intron | 45.0% |
| !! | TTCTGAGGCTTCTGTTGAAG+TGG | - | chr5.4:27249842-27249861 | MS.gene057605:intron | 45.0% |
| !!! | TTATGGGTCTTTTCAGGTGC+CGG | - | chr5.4:27249812-27249831 | MS.gene057605:intron | 45.0% |
| AAGTTTGAGGGGTGGGATCA+TGG | - | chr5.4:27250640-27250659 | MS.gene057605:intron | 50.0% | |
| ACATGAGCAGACCAATCCTC+AGG | - | chr5.4:27253096-27253115 | MS.gene057605:CDS | 50.0% | |
| ACTCTCACGGGTTTCGTTCT+TGG | + | chr5.4:27248912-27248931 | None:intergenic | 50.0% | |
| AGCAGAAAATGCAGCAGAGG+CGG | - | chr5.4:27253063-27253082 | MS.gene057605:CDS | 50.0% | |
| AGCATCAGTACTACCCTAGG+AGG | - | chr5.4:27253158-27253177 | MS.gene057605:CDS | 50.0% | |
| AGGATCTGGAGATGATCGGT+CGG | - | chr5.4:27252930-27252949 | MS.gene057605:CDS | 50.0% | |
| AGTTTGAGGGGTGGGATCAT+GGG | - | chr5.4:27250641-27250660 | MS.gene057605:intron | 50.0% | |
| ATCAGTACTACCCTAGGAGG+GGG | - | chr5.4:27253161-27253180 | MS.gene057605:CDS | 50.0% | |
| CACGGGTTTCGTTCTTGGTT+TGG | + | chr5.4:27248907-27248926 | None:intergenic | 50.0% | |
| CAGAATCAAAGAGGTGGACG+CGG | - | chr5.4:27253190-27253209 | MS.gene057605:CDS | 50.0% | |
| CATCAGTACTACCCTAGGAG+GGG | - | chr5.4:27253160-27253179 | MS.gene057605:CDS | 50.0% | |
| CATGAGCAGACCAATCCTCA+GGG | - | chr5.4:27253097-27253116 | MS.gene057605:CDS | 50.0% | |
| CATGGAAGAATCTCTCTCCC+AGG | - | chr5.4:27248751-27248770 | MS.gene057605:CDS | 50.0% | |
| CCTTCTTCAACAACCACCGA+CGG | - | chr5.4:27248662-27248681 | MS.gene057605:CDS | 50.0% | |
| CGACAACGGAGGATTTGGAA+CGG | + | chr5.4:27248811-27248830 | None:intergenic | 50.0% | |
| CTGGGAGAGAGATTCTTCCA+TGG | + | chr5.4:27248753-27248772 | None:intergenic | 50.0% | |
| CTTACAAGGACACATGAGCG+TGG | - | chr5.4:27249064-27249083 | MS.gene057605:intron | 50.0% | |
| GACCAATCCTCAGGGTGATT+TGG | - | chr5.4:27253105-27253124 | MS.gene057605:CDS | 50.0% | |
| GAGAGCGACATTGAATGGGA+TGG | - | chr5.4:27249965-27249984 | MS.gene057605:intron | 50.0% | |
| GAGGCTTCTGTTGAAGTGGA+GGG | - | chr5.4:27249846-27249865 | MS.gene057605:intron | 50.0% | |
| GCAGCTGCTGCTGGAAATTA+TGG | - | chr5.4:27249795-27249814 | MS.gene057605:intron | 50.0% | |
| GCATCAGTACTACCCTAGGA+GGG | - | chr5.4:27253159-27253178 | MS.gene057605:CDS | 50.0% | |
| GCTCAACCGTATCACTTCCA+TGG | - | chr5.4:27248733-27248752 | MS.gene057605:CDS | 50.0% | |
| GGAAGAGGTTACCCTAATGG+TGG | - | chr5.4:27253268-27253287 | MS.gene057605:CDS | 50.0% | |
| GTAAGTCTGGCTGCCTCAAA+TGG | - | chr5.4:27252062-27252081 | MS.gene057605:intron | 50.0% | |
| TAACTTGACCACCTGCACCA+TGG | + | chr5.4:27253387-27253406 | None:intergenic | 50.0% | |
| TACTACAGCAACCATGGTGC+AGG | - | chr5.4:27253373-27253392 | MS.gene057605:CDS | 50.0% | |
| TCAACCAGATGGAGAGGGAA+AGG | - | chr5.4:27253135-27253154 | MS.gene057605:CDS | 50.0% | |
| TCCAAGACCCCTACCATTTG+AGG | + | chr5.4:27252078-27252097 | None:intergenic | 50.0% | |
| TCTGGCTGCCTCAAATGGTA+GGG | - | chr5.4:27252067-27252086 | MS.gene057605:intron | 50.0% | |
| TGAGGCTTCTGTTGAAGTGG+AGG | - | chr5.4:27249845-27249864 | MS.gene057605:intron | 50.0% | |
| TGGCTACCCAACCACATGTA+GGG | + | chr5.4:27252133-27252152 | None:intergenic | 50.0% | |
| TGTGAAAAGCTCGAATCGGC+CGG | + | chr5.4:27249193-27249212 | None:intergenic | 50.0% | |
| TTCTTGCTGCTCGCTGTTGA+GGG | + | chr5.4:27248783-27248802 | None:intergenic | 50.0% | |
| TTGGCTACCCAACCACATGT+AGG | + | chr5.4:27252134-27252153 | None:intergenic | 50.0% | |
| TTGGTCTGCTCATGTTGGAC+TGG | + | chr5.4:27253091-27253110 | None:intergenic | 50.0% | |
| ! | AGGGTACCCTACATGTGGTT+GGG | - | chr5.4:27252124-27252143 | MS.gene057605:intron | 50.0% |
| ! | GCTGTTGAGGGATTTTCCCT+GGG | + | chr5.4:27248771-27248790 | None:intergenic | 50.0% |
| ! | TACTCCTGAAATGAAGGCGC+CGG | - | chr5.4:27249761-27249780 | MS.gene057605:intron | 50.0% |
| !! | ACATCGCTGTTTTCACCGCT+CGG | + | chr5.4:27248965-27248984 | None:intergenic | 50.0% |
| !! | AGGAGCATCAGTACTACCCT+AGG | - | chr5.4:27253155-27253174 | MS.gene057605:CDS | 50.0% |
| !! | GAGGATTGGTCTGCTCATGT+TGG | + | chr5.4:27253096-27253115 | None:intergenic | 50.0% |
| !! | TGGGCTGTTGATTTCGAGAC+CGG | - | chr5.4:27249171-27249190 | MS.gene057605:CDS | 50.0% |
| !!! | GTAGTTTTGGTTGGATGCGG+TGG | + | chr5.4:27251777-27251796 | None:intergenic | 50.0% |
| AACAGAGGACGTGGAGGAAG+AGG | - | chr5.4:27253343-27253362 | MS.gene057605:CDS | 55.0% | |
| AATCAAAGAGGTGGACGCGG+TGG | - | chr5.4:27253193-27253212 | MS.gene057605:CDS | 55.0% | |
| AGCTGGGGTTTCACTCTCAC+GGG | + | chr5.4:27248924-27248943 | None:intergenic | 55.0% | |
| ATCGATGAGAGCGACAACGG+AGG | + | chr5.4:27248822-27248841 | None:intergenic | 55.0% | |
| ATGATGCGACGGATCTGCTG+GGG | - | chr5.4:27249116-27249135 | MS.gene057605:intron | 55.0% | |
| CAGCTGGGGTTTCACTCTCA+CGG | + | chr5.4:27248925-27248944 | None:intergenic | 55.0% | |
| CCGTCGGTGGTTGTTGAAGA+AGG | + | chr5.4:27248665-27248684 | None:intergenic | 55.0% | |
| CTGGCTGCCTCAAATGGTAG+GGG | - | chr5.4:27252068-27252087 | MS.gene057605:intron | 55.0% | |
| CTTCTTGCTGCTCGCTGTTG+AGG | + | chr5.4:27248784-27248803 | None:intergenic | 55.0% | |
| GAGAGCGACAACGGAGGATT+TGG | + | chr5.4:27248816-27248835 | None:intergenic | 55.0% | |
| GATGATCGGTCGGATCCTGA+AGG | - | chr5.4:27252940-27252959 | MS.gene057605:CDS | 55.0% | |
| GATGATGCGACGGATCTGCT+GGG | - | chr5.4:27249115-27249134 | MS.gene057605:intron | 55.0% | |
| GCCTCAAATGGTAGGGGTCT+TGG | - | chr5.4:27252074-27252093 | MS.gene057605:intron | 55.0% | |
| GGTGGCTACTACAGCAACCA+TGG | - | chr5.4:27253367-27253386 | MS.gene057605:CDS | 55.0% | |
| GTCTGGCTGCCTCAAATGGT+AGG | - | chr5.4:27252066-27252085 | MS.gene057605:intron | 55.0% | |
| TACAGCAACCATGGTGCAGG+TGG | - | chr5.4:27253376-27253395 | MS.gene057605:CDS | 55.0% | |
| TCAAATGGTCGTGGAGGTCG+TGG | - | chr5.4:27253235-27253254 | MS.gene057605:CDS | 55.0% | |
| TCAGTACTACCCTAGGAGGG+GGG | - | chr5.4:27253162-27253181 | MS.gene057605:CDS | 55.0% | |
| TCTGATAACCCCCCCTCCTA+GGG | + | chr5.4:27253174-27253193 | None:intergenic | 55.0% | |
| TCTGCTGGGGGAGAAGGATT+TGG | - | chr5.4:27249129-27249148 | MS.gene057605:CDS | 55.0% | |
| TGAGCTTCTTGCGGAGTGCA+CGG | + | chr5.4:27248718-27248737 | None:intergenic | 55.0% | |
| TGCTCCTTTCCCTCTCCATC+TGG | + | chr5.4:27253142-27253161 | None:intergenic | 55.0% | |
| TGTTGCAGGGGGGAACTGAT+AGG | - | chr5.4:27250999-27251018 | MS.gene057605:intron | 55.0% | |
| TTCTGATAACCCCCCCTCCT+AGG | + | chr5.4:27253175-27253194 | None:intergenic | 55.0% | |
| TTGGCAATGTCCGCGCCATT+AGG | - | chr5.4:27252340-27252359 | MS.gene057605:CDS | 55.0% | |
| ! | CGCTGTTGAGGGATTTTCCC+TGG | + | chr5.4:27248772-27248791 | None:intergenic | 55.0% |
| ! | TGATGATGCGACGGATCTGC+TGG | - | chr5.4:27249114-27249133 | MS.gene057605:intron | 55.0% |
| !! | CACGGAGGCGTTTGTTGATG+AGG | + | chr5.4:27248700-27248719 | None:intergenic | 55.0% |
| !! | CGGTTCGGAGTTTTCAGCTG+GGG | + | chr5.4:27248939-27248958 | None:intergenic | 55.0% |
| !! | GAGGGTACCCTACATGTGGT+TGG | - | chr5.4:27252123-27252142 | MS.gene057605:intron | 55.0% |
| !! | GCGGTTCGGAGTTTTCAGCT+GGG | + | chr5.4:27248940-27248959 | None:intergenic | 55.0% |
| !!! | TCTTTTCAGGTGCCGGTGCA+CGG | - | chr5.4:27249819-27249838 | MS.gene057605:intron | 55.0% |
| AATGGTCGTGGAGGTCGTGG+TGG | - | chr5.4:27253238-27253257 | MS.gene057605:CDS | 60.0% | |
| AGAGGACGTGGAGGAAGAGG+TGG | - | chr5.4:27253346-27253365 | MS.gene057605:CDS | 60.0% | |
| CAGTACTACCCTAGGAGGGG+GGG | - | chr5.4:27253163-27253182 | MS.gene057605:CDS | 60.0% | |
| GAAGCCTCAGAACCGTGCAC+CGG | + | chr5.4:27249834-27249853 | None:intergenic | 60.0% | |
| GAAGTTGCTGCAGCTGCTGC+TGG | - | chr5.4:27249786-27249805 | MS.gene057605:intron | 60.0% | |
| GAGGTTCAAGACGGGTCCGT+CGG | + | chr5.4:27248681-27248700 | None:intergenic | 60.0% | |
| GCAGCTGCAGCAACTTCCAC+CGG | + | chr5.4:27249783-27249802 | None:intergenic | 60.0% | |
| TCCACCGGCGCCTTCATTTC+AGG | + | chr5.4:27249768-27249787 | None:intergenic | 60.0% | |
| TGATGCGACGGATCTGCTGG+GGG | - | chr5.4:27249117-27249136 | MS.gene057605:intron | 60.0% | |
| ! | CTGTTTTCACCGCTCGGTCG+CGG | + | chr5.4:27248959-27248978 | None:intergenic | 60.0% |
| !! | CGCGGTTCGGAGTTTTCAGC+TGG | + | chr5.4:27248941-27248960 | None:intergenic | 60.0% |
| !! | TCCTGAAATGAAGGCGCCGG+TGG | - | chr5.4:27249764-27249783 | MS.gene057605:intron | 60.0% |
| AACTCCGAACCGCGACCGAG+CGG | - | chr5.4:27248947-27248966 | MS.gene057605:CDS | 65.0% | |
| ACGCGGTGGAGGTGGTAGGA+GGG | - | chr5.4:27253207-27253226 | MS.gene057605:CDS | 65.0% | |
| CAAAGAGGTGGACGCGGTGG+AGG | - | chr5.4:27253196-27253215 | MS.gene057605:CDS | 65.0% | |
| GACGGATCTGCTGGGGGAGA+AGG | - | chr5.4:27249123-27249142 | MS.gene057605:CDS | 65.0% | |
| GCTTCTTGCGGAGTGCACGG+AGG | + | chr5.4:27248715-27248734 | None:intergenic | 65.0% | |
| GGACGTGGAGGAAGAGGTGG+TGG | - | chr5.4:27253349-27253368 | MS.gene057605:CDS | 65.0% | |
| GTTCAAGACGGGTCCGTCGG+TGG | + | chr5.4:27248678-27248697 | None:intergenic | 65.0% | |
| TTCACCGCTCGGTCGCGGTT+CGG | + | chr5.4:27248954-27248973 | None:intergenic | 65.0% | |
| !! | CGTGGTGGTGGCAGAGGAAG+AGG | - | chr5.4:27253253-27253272 | MS.gene057605:CDS | 65.0% |
| AGAGGTGGACGCGGTGGAGG+TGG | - | chr5.4:27253199-27253218 | MS.gene057605:CDS | 70.0% | |
| CGCGGTGGAGGTGGTAGGAG+GGG | - | chr5.4:27253208-27253227 | MS.gene057605:CDS | 70.0% | |
| GACGCGGTGGAGGTGGTAGG+AGG | - | chr5.4:27253206-27253225 | MS.gene057605:CDS | 70.0% | |
| GGTCGTGGAGGTCGTGGTGG+TGG | - | chr5.4:27253241-27253260 | MS.gene057605:CDS | 70.0% | |
| GTGGACGCGGTGGAGGTGGT+AGG | - | chr5.4:27253203-27253222 | MS.gene057605:CDS | 70.0% | |
| !! | GGAGGTCGTGGTGGTGGCAG+AGG | - | chr5.4:27253247-27253266 | MS.gene057605:CDS | 70.0% |
| !! | GGTGCCGGTGCACGGTTCTG+AGG | - | chr5.4:27249827-27249846 | MS.gene057605:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 27248656 | 27253441 | 27248656 | ID=MS.gene057605 |
| chr5.4 | mRNA | 27248656 | 27253441 | 27248656 | ID=MS.gene057605.t1;Parent=MS.gene057605 |
| chr5.4 | exon | 27252796 | 27253441 | 27252796 | ID=MS.gene057605.t1.exon1;Parent=MS.gene057605.t1 |
| chr5.4 | CDS | 27252796 | 27253441 | 27252796 | ID=cds.MS.gene057605.t1;Parent=MS.gene057605.t1 |
| chr5.4 | exon | 27252207 | 27252391 | 27252207 | ID=MS.gene057605.t1.exon2;Parent=MS.gene057605.t1 |
| chr5.4 | CDS | 27252207 | 27252391 | 27252207 | ID=cds.MS.gene057605.t1;Parent=MS.gene057605.t1 |
| chr5.4 | exon | 27249122 | 27249196 | 27249122 | ID=MS.gene057605.t1.exon3;Parent=MS.gene057605.t1 |
| chr5.4 | CDS | 27249122 | 27249196 | 27249122 | ID=cds.MS.gene057605.t1;Parent=MS.gene057605.t1 |
| chr5.4 | exon | 27248656 | 27249045 | 27248656 | ID=MS.gene057605.t1.exon4;Parent=MS.gene057605.t1 |
| chr5.4 | CDS | 27248656 | 27249045 | 27248656 | ID=cds.MS.gene057605.t1;Parent=MS.gene057605.t1 |
| Gene Sequence |
| Protein sequence |
