AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene75424

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene75424.t1 MTR_3g088150 96.531 490 17 0 1 490 1 490 0.0 976
MS.gene75424.t1 MTR_1g029840 78.261 483 105 0 8 490 6 488 0.0 810
MS.gene75424.t1 MTR_1g029840 77.963 481 106 0 10 490 8 488 0.0 803
MS.gene75424.t1 MTR_8g094600 65.918 490 167 0 1 490 52 541 0.0 704
MS.gene75424.t1 MTR_8g076480 47.548 469 246 0 15 483 6 474 6.93e-166 478
MS.gene75424.t1 MTR_2g097950 46.764 479 252 1 13 488 15 493 2.09e-159 462
MS.gene75424.t1 MTR_4g065040 50.881 454 220 1 22 472 9 462 2.41e-146 428
MS.gene75424.t1 MTR_2g097950 44.118 476 234 2 13 488 15 458 1.13e-142 418
MS.gene75424.t1 MTR_1222s0010 36.649 382 230 5 19 396 6 379 1.14e-79 263
MS.gene75424.t1 MTR_1314s0010 35.503 338 208 4 118 447 1 336 2.11e-69 225
MS.gene75424.t1 MTR_3g078550 29.954 434 285 9 27 447 28 455 9.46e-41 152
MS.gene75424.t1 MTR_3g078550 29.954 434 285 9 27 447 58 485 1.42e-40 152
MS.gene75424.t1 MTR_4g106510 28.947 418 281 9 40 447 74 485 5.46e-40 151
MS.gene75424.t1 MTR_2g034160 25.000 444 311 7 36 467 106 539 2.55e-39 150
MS.gene75424.t1 MTR_3g078490 29.263 434 288 10 27 447 88 515 1.98e-38 147
MS.gene75424.t1 MTR_2g067660 27.874 348 242 8 114 455 178 522 4.68e-33 132
MS.gene75424.t1 MTR_8g064170 26.790 433 299 11 26 448 108 532 6.48e-30 123
MS.gene75424.t1 MTR_4g107040 26.770 452 299 13 14 448 99 535 9.56e-29 119
MS.gene75424.t1 MTR_8g083530 28.070 342 230 9 117 448 159 494 3.17e-27 114
MS.gene75424.t1 MTR_3g078170 27.212 452 297 14 14 448 97 533 7.24e-27 114
MS.gene75424.t1 MTR_4g131180 28.743 334 229 7 118 448 158 485 2.12e-26 112
MS.gene75424.t1 MTR_6g086300 28.319 339 233 8 117 448 158 493 8.02e-25 107
MS.gene75424.t1 MTR_6g086300 28.319 339 233 8 117 448 158 493 8.02e-25 107
MS.gene75424.t1 MTR_6g086340 27.515 338 235 8 117 447 156 490 6.97e-24 104
MS.gene75424.t1 MTR_1g014320 25.000 460 318 12 5 448 37 485 8.98e-24 104
MS.gene75424.t1 MTR_4g131180 29.818 275 185 6 118 389 158 427 4.54e-23 102
MS.gene75424.t1 MTR_8g064170 24.884 430 279 13 26 448 108 500 9.06e-22 98.6
MS.gene75424.t1 MTR_2g009750 29.032 310 194 11 115 408 147 446 9.18e-20 92.4
MS.gene75424.t1 MTR_2g009750 29.032 310 194 11 115 408 146 445 9.57e-20 92.4
MS.gene75424.t1 MTR_4g093170 27.362 307 204 8 115 408 174 474 9.97e-20 92.4
MS.gene75424.t1 MTR_2g009750 29.032 310 195 10 115 408 147 447 1.57e-19 91.7
MS.gene75424.t1 MTR_3g078490 29.452 292 193 7 27 309 58 345 2.33e-19 90.1
MS.gene75424.t1 MTR_1399s0020 25.779 353 204 9 115 463 50 348 4.58e-18 85.9
MS.gene75424.t1 MTR_3g078170 27.049 366 237 13 14 362 97 449 7.54e-18 86.3
MS.gene75424.t1 MTR_4g020720 40.000 125 66 4 185 303 116 237 1.13e-17 83.6
MS.gene75424.t1 MTR_8g083520 26.163 344 201 10 117 448 70 372 2.48e-17 84.0
MS.gene75424.t1 MTR_8g083520 26.163 344 201 10 117 448 150 452 2.66e-17 84.7
MS.gene75424.t1 MTR_4g020710 47.368 76 40 0 295 370 8 83 9.43e-16 74.3
MS.gene75424.t1 MTR_2g042330 26.370 292 192 12 118 393 155 439 1.40e-14 76.3
MS.gene75424.t1 MTR_3g078170 29.771 262 157 10 14 261 97 345 4.93e-14 74.3
MS.gene75424.t1 MTR_3g078170 29.771 262 157 10 14 261 97 345 5.56e-14 74.3
MS.gene75424.t1 MTR_8g083530 35.762 151 88 5 117 261 159 306 2.06e-13 72.0
MS.gene75424.t1 MTR_1690s0010 27.801 241 153 10 89 314 111 345 8.43e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene75424.t1 AT1G44170 68.058 479 153 0 10 488 4 482 0.0 705
MS.gene75424.t1 AT1G44170 68.058 479 153 0 10 488 4 482 0.0 705
MS.gene75424.t1 AT4G34240 64.435 478 170 0 13 490 70 547 0.0 645
MS.gene75424.t1 AT4G34240 64.435 478 170 0 13 490 55 532 0.0 644
MS.gene75424.t1 AT1G44170 70.560 411 121 0 78 488 9 419 0.0 634
MS.gene75424.t1 AT4G34240 67.327 404 132 0 87 490 2 405 0.0 566
MS.gene75424.t1 AT4G36250 47.609 460 238 1 16 472 6 465 6.45e-163 470
MS.gene75424.t1 AT4G34240 66.667 321 107 0 13 333 70 390 3.70e-151 436
MS.gene75424.t1 AT3G66658 27.146 431 296 6 36 452 106 532 3.68e-44 163
MS.gene75424.t1 AT3G66658 27.146 431 296 6 36 452 106 532 7.87e-44 163
MS.gene75424.t1 AT1G74920 27.511 458 303 12 15 449 37 488 1.16e-42 158
MS.gene75424.t1 AT1G74920 28.741 421 283 10 40 449 69 483 2.76e-42 157
MS.gene75424.t1 AT3G48170 27.273 418 288 9 40 447 74 485 4.81e-37 143
MS.gene75424.t1 AT1G79440 28.529 340 234 7 114 447 184 520 2.73e-34 135
MS.gene75424.t1 AT1G23800 27.455 448 301 13 14 448 89 525 1.95e-33 133
MS.gene75424.t1 AT3G48000 26.549 452 300 14 14 448 93 529 1.12e-28 119
MS.gene75424.t1 AT3G24503 27.729 339 235 7 117 448 157 492 1.48e-27 115
MS.gene75424.t1 AT2G24270 28.144 334 231 7 118 448 158 485 3.69e-25 108
MS.gene75424.t1 AT2G24270 28.144 334 231 7 118 448 158 485 3.69e-25 108
MS.gene75424.t1 AT2G24270 28.144 334 231 7 118 448 158 485 4.13e-25 108
MS.gene75424.t1 AT2G24270 28.707 317 217 7 118 431 198 508 4.54e-25 108
MS.gene75424.t1 AT2G14170 27.666 347 227 12 117 447 139 477 1.71e-18 88.6
MS.gene75424.t1 AT2G14170 27.666 347 227 12 117 447 248 586 2.08e-18 88.6
MS.gene75424.t1 AT2G14170 27.778 306 200 10 117 408 248 546 3.89e-17 84.7
MS.gene75424.t1 AT1G23800 29.070 258 164 9 14 261 89 337 1.17e-16 82.4
MS.gene75424.t1 AT1G54100 22.145 289 208 8 118 393 154 438 5.80e-15 77.8
MS.gene75424.t1 AT1G54100 22.145 289 208 8 118 393 154 438 5.80e-15 77.8

Find 120 sgRNAs with CRISPR-Local

Find 270 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTTTCCAATTCTGTCTTTA+AGG 0.114075 3.3:+73365934 None:intergenic
GGGAAAATTTCATACCAATT+TGG 0.160031 3.3:+73366028 None:intergenic
GTTTCTGGCAAGGTTGTTTA+TGG 0.170486 3.3:-73365815 MS.gene75424:CDS
TCACTGCTGGCGAACTTATT+AGG 0.192129 3.3:-73366851 MS.gene75424:CDS
GGAAAATTTCATACCAATTT+GGG 0.208738 3.3:+73366029 None:intergenic
ACAGAATTGGAAAGCTTCTT+TGG 0.227872 3.3:-73365926 MS.gene75424:CDS
TTGGACGACGAGAAGGTTTC+TGG 0.237632 3.3:-73365830 MS.gene75424:CDS
TGGTTCATACTTTGCCATTT+GGG 0.248058 3.3:-73365224 MS.gene75424:CDS
GTGGTTCATACTTTGCCATT+TGG 0.266390 3.3:-73365225 MS.gene75424:CDS
TTTGTTGTTATAACGTAATC+AGG 0.304335 3.3:+73366062 None:intergenic
CACTGCTGGCGAACTTATTA+GGG 0.310991 3.3:-73366850 MS.gene75424:CDS
GATAAATCATTGGATTCTAT+TGG 0.315485 3.3:+73365896 None:intergenic
ACAGCTAGACGGATAATTTC+AGG 0.342418 3.3:-73366122 MS.gene75424:CDS
ACACCTTACACCAGTCGTTC+TGG 0.352826 3.3:-73366505 MS.gene75424:CDS
CTAGTCGCCGGCGATGTTAC+TGG 0.358446 3.3:-73365048 MS.gene75424:CDS
GGATTCAAATGTCAATTTAG+AGG 0.363970 3.3:-73366454 MS.gene75424:intron
TTTATTCTTACCGTGATAAT+GGG 0.376274 3.3:+73365611 None:intergenic
CTGAGGGTGAGCTTTAATTC+TGG 0.376691 3.3:-73369013 MS.gene75424:CDS
TTCTAACCACTTTGCTCGCT+TGG 0.378374 3.3:-73365861 MS.gene75424:CDS
TGATGCCTTAAAGACAGAAT+TGG 0.379258 3.3:-73365939 MS.gene75424:CDS
AACACTACACCAAGTGGTTC+AGG 0.380052 3.3:+73367357 None:intergenic
TCCAGCCTCGTCTTCACTGC+TGG 0.400434 3.3:-73366864 MS.gene75424:CDS
TTCTGCTTTGTATCAGTGTA+AGG 0.401680 3.3:+73365084 None:intergenic
GGAGTTGGTGACAGTGGAAT+GGG 0.406759 3.3:-73365201 MS.gene75424:CDS
GAAGATGGTTGATGAACAAC+AGG 0.411988 3.3:-73368942 MS.gene75424:CDS
GGGAGTTGGTGACAGTGGAA+TGG 0.415308 3.3:-73365202 MS.gene75424:CDS
CTGTCCCTTGATCCAGTTGT+TGG 0.425314 3.3:-73366935 MS.gene75424:CDS
CACAATGCGCGATAAATCAT+TGG 0.432655 3.3:+73365886 None:intergenic
TACAAATGACAACAAGTTCA+AGG 0.442505 3.3:-73365405 MS.gene75424:CDS
GCTGCTATAGCTCCAACAAC+TGG 0.444023 3.3:+73366923 None:intergenic
ACACCAGTCGTTCTGGAGCT+TGG 0.446970 3.3:-73366498 MS.gene75424:CDS
GACGGATAATTTCAGGAAAG+TGG 0.454051 3.3:-73366115 MS.gene75424:CDS
ATAATGAGTGAGGAGATCTT+TGG 0.458834 3.3:-73365644 MS.gene75424:CDS
TGCTCGCTTGGTAAAGATGT+TGG 0.468945 3.3:-73365849 MS.gene75424:CDS
TTTGTGAAGAATGTTTCTGC+TGG 0.473206 3.3:-73365377 MS.gene75424:CDS
GGTACTATTTCAGCTGAAGA+AGG 0.475298 3.3:+73367378 None:intergenic
ACAATGGATGGCCCCAGAAA+AGG 0.476780 3.3:-73367536 MS.gene75424:intron
ACATTTGAATCCACAACAGT+TGG 0.479478 3.3:+73366465 None:intergenic
GGTTGTTTATGGAGGTGAAA+AGG 0.487907 3.3:-73365804 MS.gene75424:CDS
TAGTAATAGTATAAAATGTC+GGG 0.491396 3.3:-73369100 None:intergenic
TGAAGCGTCTAATACAATAG+TGG 0.493489 3.3:+73365679 None:intergenic
CTGCATTGTTGCAACAAAAG+TGG 0.494247 3.3:-73366772 MS.gene75424:CDS
CTTGGAACAGGTGAACAAGC+TGG 0.495328 3.3:-73365483 MS.gene75424:intron
CGGAGAAGCGGCGTCGTCGT+TGG 0.495817 3.3:-73369044 MS.gene75424:CDS
TAGCTCCAACAACTGGATCA+AGG 0.496212 3.3:+73366930 None:intergenic
GGTTCATACTTTGCCATTTG+GGG 0.508394 3.3:-73365223 MS.gene75424:CDS
CAGAATTAAAGCTCACCCTC+AGG 0.511369 3.3:+73369014 None:intergenic
TTACGGGTGATGCATCGATA+AGG 0.514070 3.3:-73365113 MS.gene75424:CDS
GCTCCAGAACGACTGGTGTA+AGG 0.516414 3.3:+73366502 None:intergenic
TGAAGATCAGTCACAGAAGA+AGG 0.516470 3.3:-73369077 MS.gene75424:CDS
GTAAATAAATATGCAGCAAG+TGG 0.517979 3.3:+73365425 None:intergenic
GCCAGCAGTGAAGACGAGGC+TGG 0.518366 3.3:+73366863 None:intergenic
AACGTAATCAGGAGAAATGC+AGG 0.519634 3.3:+73366073 None:intergenic
AGGAAAATCTCCAACTGTTG+TGG 0.520349 3.3:-73366475 MS.gene75424:CDS
ATCTATAAGAGTTGTGGAGG+GGG 0.520366 3.3:-73366810 MS.gene75424:CDS
CAGAAGAAGGTGGTGTTTGA+CGG 0.522711 3.3:-73369064 MS.gene75424:CDS
AGCGGCGTCGTCGTTGGTGA+AGG 0.523107 3.3:-73369038 MS.gene75424:CDS
GGAAAGTGGGGCTGTAACAA+TGG 0.524895 3.3:-73366101 MS.gene75424:CDS
CCTCCAAGCTCCAGAACGAC+TGG 0.525093 3.3:+73366495 None:intergenic
TTTGTGAGTAAAAGCGTCAA+AGG 0.526185 3.3:+73365158 None:intergenic
ACGGATAATTTCAGGAAAGT+GGG 0.532211 3.3:-73366114 MS.gene75424:CDS
CTCATCTATAAGAGTTGTGG+AGG 0.535901 3.3:-73366813 MS.gene75424:CDS
CCAGTCGTTCTGGAGCTTGG+AGG 0.536552 3.3:-73366495 MS.gene75424:CDS
TTATGAATGGAGAGTATCAC+AGG 0.540197 3.3:-73368978 MS.gene75424:CDS
GTTGTTGGAGCTATAGCAGC+CGG 0.541671 3.3:-73366920 MS.gene75424:CDS
TGCTTTGTATCAGTGTAAGG+CGG 0.541950 3.3:+73365087 None:intergenic
GTAAGACACGAAGTTATGAA+TGG 0.543765 3.3:-73368991 MS.gene75424:CDS
AGCTCCAACAACTGGATCAA+GGG 0.544547 3.3:+73366931 None:intergenic
TCTGGCAAGGTTGTTTATGG+AGG 0.544720 3.3:-73365812 MS.gene75424:CDS
TACAAAGCAGAAATTGATGA+AGG 0.548509 3.3:-73365073 MS.gene75424:CDS
GTGAAGAATGTTTCTGCTGG+GGG 0.549524 3.3:-73365374 MS.gene75424:CDS
TGCATTGTTGCAACAAAAGT+GGG 0.550398 3.3:-73366771 MS.gene75424:CDS
TAGTGTTAGTCATCTCTGCT+TGG 0.552108 3.3:-73367341 MS.gene75424:CDS
TAACTCATCTATAAGAGTTG+TGG 0.553446 3.3:-73366816 MS.gene75424:CDS
CGACGAGAAGGTTTCTGGCA+AGG 0.555363 3.3:-73365825 MS.gene75424:CDS
TTTCAAGCGGTGGTTTAGCA+AGG 0.558890 3.3:+73368891 None:intergenic
TTGTGAAGAATGTTTCTGCT+GGG 0.560631 3.3:-73365376 MS.gene75424:CDS
TCCATTGCTTCCCATTATCA+CGG 0.561243 3.3:-73365621 MS.gene75424:intron
TTGATGAAGGCTCTAGTCGC+CGG 0.564772 3.3:-73365060 MS.gene75424:CDS
GAGGCTGGAGCAATTTCTGA+TGG 0.566074 3.3:+73366878 None:intergenic
CGTCGTTGGTGAAGGACCTG+AGG 0.569144 3.3:-73369030 MS.gene75424:CDS
GAAAATTTCATACCAATTTG+GGG 0.571184 3.3:+73366030 None:intergenic
CGCTGAAGGAATTGAAACAA+TGG 0.574396 3.3:-73367552 MS.gene75424:CDS
GAAGCGTCTAATACAATAGT+GGG 0.580198 3.3:+73365680 None:intergenic
GTGGAATGGGTGCATACCAT+GGG 0.581183 3.3:-73365188 MS.gene75424:CDS
GCTTTGTATCAGTGTAAGGC+GGG 0.584751 3.3:+73365088 None:intergenic
GTTCATACTTTGCCATTTGG+GGG 0.589580 3.3:-73365222 MS.gene75424:CDS
AAAGATGTTGGACGACGAGA+AGG 0.593143 3.3:-73365837 MS.gene75424:CDS
GAAGGAATTGAAACAATGGA+TGG 0.595708 3.3:-73367548 MS.gene75424:CDS
ACCGTGATAATGGGAAGCAA+TGG 0.596325 3.3:+73365620 None:intergenic
CAGGTAATGGAAAAGTGGGA+CGG 0.603039 3.3:-73366551 MS.gene75424:CDS
CTCATGTGAAGTCACGCTGA+AGG 0.604871 3.3:-73367566 MS.gene75424:CDS
TCATCTATAAGAGTTGTGGA+GGG 0.608439 3.3:-73366812 MS.gene75424:CDS
TTTACTAGGTTACAGCTAGA+CGG 0.610366 3.3:-73366133 MS.gene75424:intron
AGCTTCGATTTGATCAACGC+AGG 0.611901 3.3:-73365455 MS.gene75424:CDS
GGTGGTGTTTGACGGAGAAG+CGG 0.613325 3.3:-73369056 MS.gene75424:CDS
TAGACAACAGTTTCAAGCGG+TGG 0.617970 3.3:+73368881 None:intergenic
GTCGTTGGTGAAGGACCTGA+GGG 0.624859 3.3:-73369029 MS.gene75424:CDS
GAACTTATTAGGGAGGTACA+TGG 0.626641 3.3:-73366840 MS.gene75424:CDS
AAAATTTCATACCAATTTGG+GGG 0.628857 3.3:+73366031 None:intergenic
GTTCGCCAGCAGTGAAGACG+AGG 0.630975 3.3:+73366859 None:intergenic
AACAACACCAGTAACATCGC+CGG 0.631565 3.3:+73365041 None:intergenic
CATCTATAAGAGTTGTGGAG+GGG 0.632599 3.3:-73366811 MS.gene75424:CDS
GAAATAGTACCTGAACCACT+TGG 0.636077 3.3:-73367366 MS.gene75424:CDS
AGATTCTCTGATAATGAGTG+AGG 0.639886 3.3:-73365654 MS.gene75424:CDS
CGGATAATTTCAGGAAAGTG+GGG 0.640096 3.3:-73366113 MS.gene75424:CDS
ATGACTAACACTACACCAAG+TGG 0.646296 3.3:+73367351 None:intergenic
CAATGCAGTAGTTTCATCAA+CGG 0.649582 3.3:+73366787 None:intergenic
TGTGAAGAATGTTTCTGCTG+GGG 0.658052 3.3:-73365375 MS.gene75424:CDS
TGCTGGCGAACTTATTAGGG+AGG 0.664145 3.3:-73366847 MS.gene75424:CDS
AAAAGTGGGACGGATAGTGA+TGG 0.666797 3.3:-73366541 MS.gene75424:CDS
AGTGGGACGGATAGTGATGG+CGG 0.669702 3.3:-73366538 MS.gene75424:CDS
AGTGGAATGGGTGCATACCA+TGG 0.672625 3.3:-73365189 MS.gene75424:CDS
TCTTTACCAAGCGAGCAAAG+TGG 0.678259 3.3:+73365855 None:intergenic
GCTTGAAACTGTTGTCTACG+AGG 0.679853 3.3:-73368876 MS.gene75424:intron
TATAGCAGCCGGAAACGCCG+TGG 0.683688 3.3:-73366909 MS.gene75424:CDS
TCGTAGACAACAGTTTCAAG+CGG 0.691579 3.3:+73368878 None:intergenic
CGTCAAAGGAGAATTTCCCA+TGG 0.693948 3.3:+73365172 None:intergenic
ATGCATCACCCGTAAAACCA+CGG 0.701105 3.3:+73365121 None:intergenic
AGATCAGTCACAGAAGAAGG+TGG 0.702169 3.3:-73369074 MS.gene75424:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTCAACTTAAAATATTTTT+GGG - chr3.3:73366280-73366299 MS.gene75424:intron 10.0%
!!! TCATATATATATGATTTTTA+TGG - chr3.3:73365275-73365294 MS.gene75424:intron 10.0%
!!! TTTTATGTTTTCTTTAATAA+AGG - chr3.3:73365511-73365530 MS.gene75424:intron 10.0%
!! TAGATTATTAAAGAAACTAA+AGG + chr3.3:73367106-73367125 None:intergenic 15.0%
!!! GATTCAACTTAAAATATTTT+TGG - chr3.3:73366279-73366298 MS.gene75424:intron 15.0%
!!! TAAAGTTAAATTGTTTTCAA+TGG + chr3.3:73367747-73367766 None:intergenic 15.0%
!!! TAAATTAATTTGTGTTTACT+AGG - chr3.3:73367955-73367974 MS.gene75424:intron 15.0%
!!! TATATCTAAATCAATTTGTT+AGG - chr3.3:73365778-73365797 MS.gene75424:intron 15.0%
!!! TTTTGGAAAATATAAGTAAA+AGG - chr3.3:73365900-73365919 MS.gene75424:CDS 15.0%
!! AAAAATAAACTTTGATTGAC+TGG - chr3.3:73365951-73365970 MS.gene75424:intron 20.0%
!! AAAATTCACAATACCAATAA+TGG + chr3.3:73367454-73367473 None:intergenic 20.0%
!! AAGATATCGTGAAAAATTTA+TGG + chr3.3:73366934-73366953 None:intergenic 20.0%
!! AGTTCCTTTAATAATATTTC+AGG - chr3.3:73366678-73366697 MS.gene75424:intron 20.0%
!! TACAAATGTTACAAAATGTT+CGG + chr3.3:73366378-73366397 None:intergenic 20.0%
!! TTAAGTCAATAATGAGTTAA+GGG + chr3.3:73367938-73367957 None:intergenic 20.0%
!! TTAGCCTGAAATATTATTAA+AGG + chr3.3:73366685-73366704 None:intergenic 20.0%
!! TTTAAAAATTTAGTATCCCT+TGG - chr3.3:73366303-73366322 MS.gene75424:intron 20.0%
!! TTTAAGTCAATAATGAGTTA+AGG + chr3.3:73367939-73367958 None:intergenic 20.0%
!!! AAAAGCATTTTTCTTTTTGA+AGG + chr3.3:73365561-73365580 None:intergenic 20.0%
!!! AAAAGGTGTATGTAAAATAA+GGG - chr3.3:73365917-73365936 MS.gene75424:CDS 20.0%
!!! AAAGCATTTTTCTTTTTGAA+GGG + chr3.3:73365560-73365579 None:intergenic 20.0%
!!! ATAAACATCATAAGTTTTCA+AGG - chr3.3:73365387-73365406 MS.gene75424:CDS 20.0%
!!! ATGGTTATGAATTGTTATTT+TGG - chr3.3:73367407-73367426 MS.gene75424:intron 20.0%
!!! ATTAAATTTTTCATCCAATC+AGG - chr3.3:73367846-73367865 MS.gene75424:intron 20.0%
!!! GTAACTAAACAAACATATTT+TGG - chr3.3:73366395-73366414 MS.gene75424:intron 20.0%
!!! GTTACTCTATTTTGAATTTA+TGG + chr3.3:73366356-73366375 None:intergenic 20.0%
!!! TAAAAGGTGTATGTAAAATA+AGG - chr3.3:73365916-73365935 MS.gene75424:CDS 20.0%
!!! TAAGTAATTACTTGATTTTC+AGG - chr3.3:73367532-73367551 MS.gene75424:intron 20.0%
!!! TATGTTTTCTTTAATAAAGG+AGG - chr3.3:73365514-73365533 MS.gene75424:intron 20.0%
!!! TATTCTTGAGATTTTTCATT+TGG - chr3.3:73365416-73365435 MS.gene75424:CDS 20.0%
!!! TATTTTGAATTTATGGAAAG+CGG + chr3.3:73366349-73366368 None:intergenic 20.0%
!!! TGTATCCAATTTAAAACAAT+GGG - chr3.3:73368569-73368588 MS.gene75424:intron 20.0%
!!! TTCACCTTCTTTTTTTTTTA+CGG - chr3.3:73365579-73365598 MS.gene75424:intron 20.0%
!!! TTGTATCCAATTTAAAACAA+TGG - chr3.3:73368568-73368587 MS.gene75424:intron 20.0%
!!! TTTACCTTTTGTTATACAAA+TGG - chr3.3:73366975-73366994 MS.gene75424:intron 20.0%
! AAAATTTCATACCAATTTGG+GGG + chr3.3:73368074-73368093 None:intergenic 25.0%
! AATCAAAGTAATTGTATCGT+CGG + chr3.3:73365467-73365486 None:intergenic 25.0%
! AGCAACTTAAACATGAAATT+AGG + chr3.3:73365254-73365273 None:intergenic 25.0%
! ATAAGTAACATTGCATGATA+AGG + chr3.3:73368831-73368850 None:intergenic 25.0%
! ATAATACTTTCTTTCTTGCT+TGG - chr3.3:73368601-73368620 MS.gene75424:intron 25.0%
! CACTATATATCGAAAACTAT+TGG + chr3.3:73365831-73365850 None:intergenic 25.0%
! CATTTAGTAAAAAAGGAAAG+AGG + chr3.3:73366208-73366227 None:intergenic 25.0%
! GAAAATTTCATACCAATTTG+GGG + chr3.3:73368075-73368094 None:intergenic 25.0%
! GATAAATCATTGGATTCTAT+TGG + chr3.3:73368209-73368228 None:intergenic 25.0%
! GGAAAATTTCATACCAATTT+GGG + chr3.3:73368076-73368095 None:intergenic 25.0%
! TAAAATATTGACGTCATACA+AGG + chr3.3:73365496-73365515 None:intergenic 25.0%
! TAAGCCATTTGTATAACAAA+AGG + chr3.3:73366982-73367001 None:intergenic 25.0%
! TAAGTCAATAATGAGTTAAG+GGG + chr3.3:73367937-73367956 None:intergenic 25.0%
! TGACTGGAAAATAAAAAAGA+AGG + chr3.3:73367885-73367904 None:intergenic 25.0%
! TGTTCCGTAAAAAAAAAAGA+AGG + chr3.3:73365586-73365605 None:intergenic 25.0%
! TTAATAAGTCAATCCAAACA+TGG + chr3.3:73367686-73367705 None:intergenic 25.0%
! TTTATTCTTACCGTGATAAT+GGG + chr3.3:73368494-73368513 None:intergenic 25.0%
!! ACAAAATTTTGTATACAGGT+TGG - chr3.3:73367354-73367373 MS.gene75424:CDS 25.0%
!! GTATCCAATTTAAAACAATG+GGG - chr3.3:73368570-73368589 MS.gene75424:intron 25.0%
!! TTTTATATACTGCAATGCAA+TGG - chr3.3:73368366-73368385 MS.gene75424:intron 25.0%
!! TTTTATTCTTACCGTGATAA+TGG + chr3.3:73368495-73368514 None:intergenic 25.0%
!!! ATTACTTGATTTTCAGGTAA+TGG - chr3.3:73367538-73367557 MS.gene75424:CDS 25.0%
!!! CAATTTAGAGGTATTGATTA+AGG - chr3.3:73367660-73367679 MS.gene75424:intron 25.0%
!!! CATAATAAATTGGTTTGGTT+TGG - chr3.3:73365741-73365760 MS.gene75424:intron 25.0%
!!! CTCTTTCCTTTTTTACTAAA+TGG - chr3.3:73366206-73366225 MS.gene75424:intron 25.0%
!!! TGTTTTTTACAATGAGTAGT+TGG - chr3.3:73365987-73366006 MS.gene75424:intron 25.0%
!!! TTTGTTGTTATAACGTAATC+AGG + chr3.3:73368043-73368062 None:intergenic 25.0%
AATACAACTAAGCAATTGAC+AGG - chr3.3:73366421-73366440 MS.gene75424:intron 30.0%
AATCACGTAAATACAAGTCA+CGG - chr3.3:73365644-73365663 MS.gene75424:CDS 30.0%
AATCCTAATAGCCATAACTT+TGG - chr3.3:73366030-73366049 MS.gene75424:intron 30.0%
ACTTCCTAGGCATAATAAAT+TGG - chr3.3:73365731-73365750 MS.gene75424:intron 30.0%
ATTGAGTGAAATGAAACCAA+GGG + chr3.3:73366322-73366341 None:intergenic 30.0%
CAAACCAATTTATTATGCCT+AGG + chr3.3:73365738-73365757 None:intergenic 30.0%
CCTACTAAACTTGAATTAAG+AGG + chr3.3:73368346-73368365 None:intergenic 30.0%
CTAGGCATAATAAATTGGTT+TGG - chr3.3:73365736-73365755 MS.gene75424:intron 30.0%
GATAAGGATATATGCATTCA+TGG + chr3.3:73368815-73368834 None:intergenic 30.0%
GGATTCAAATGTCAATTTAG+AGG - chr3.3:73367648-73367667 MS.gene75424:intron 30.0%
GGGAAAATTTCATACCAATT+TGG + chr3.3:73368077-73368096 None:intergenic 30.0%
GTAAATAAATATGCAGCAAG+TGG + chr3.3:73368680-73368699 None:intergenic 30.0%
GTCTTTGTGTATCTAATGTT+TGG - chr3.3:73368122-73368141 MS.gene75424:intron 30.0%
TAACTCAAATACAACCAACA+AGG + chr3.3:73367073-73367092 None:intergenic 30.0%
TAACTCATCTATAAGAGTTG+TGG - chr3.3:73367286-73367305 MS.gene75424:intron 30.0%
TACAAAGCAGAAATTGATGA+AGG - chr3.3:73369029-73369048 MS.gene75424:CDS 30.0%
TACAAATGACAACAAGTTCA+AGG - chr3.3:73368697-73368716 MS.gene75424:intron 30.0%
TAGTAAAAAAGGAAAGAGGT+TGG + chr3.3:73366204-73366223 None:intergenic 30.0%
TATACCATTCTCAACTACAT+TGG - chr3.3:73366257-73366276 MS.gene75424:intron 30.0%
TATTGTGTCAACCAAAGTTA+TGG + chr3.3:73366044-73366063 None:intergenic 30.0%
TCATATTGCTTTCATGTGTA+AGG + chr3.3:73367793-73367812 None:intergenic 30.0%
TGATATAACTAGTTACTGAC+TGG + chr3.3:73367901-73367920 None:intergenic 30.0%
! ATTTAGAACTCTTAACAACG+AGG + chr3.3:73368098-73368117 None:intergenic 30.0%
! ATTTGGAGTCACTATTATGA+TGG - chr3.3:73365433-73365452 MS.gene75424:CDS 30.0%
! CCTCTTAATTCAAGTTTAGT+AGG - chr3.3:73368343-73368362 MS.gene75424:intron 30.0%
! GGGTAAAATAAACCTTTTCT+GGG + chr3.3:73366581-73366600 None:intergenic 30.0%
! GGTAAAATAAACCTTTTCTG+GGG + chr3.3:73366580-73366599 None:intergenic 30.0%
! TGGGACAAAATTTTGTATAC+AGG - chr3.3:73367350-73367369 MS.gene75424:CDS 30.0%
! TTTAGAACTCTTAACAACGA+GGG + chr3.3:73368097-73368116 None:intergenic 30.0%
!! TTGTGAGAACTAAAGTGTTT+TGG - chr3.3:73365883-73365902 MS.gene75424:CDS 30.0%
!!! ATGTACTTTGTTTTGCAGAT+TGG - chr3.3:73366501-73366520 MS.gene75424:CDS 30.0%
!!! ATTTTCAGGTAATGGAAAAG+TGG - chr3.3:73367546-73367565 MS.gene75424:CDS 30.0%
!!! TTTTCAGGTAATGGAAAAGT+GGG - chr3.3:73367547-73367566 MS.gene75424:CDS 30.0%
AAGTAATTGTATCGTCGGAA+CGG + chr3.3:73365462-73365481 None:intergenic 35.0%
ACAGAATTGGAAAGCTTCTT+TGG - chr3.3:73368176-73368195 MS.gene75424:intron 35.0%
ACATTTGAATCCACAACAGT+TGG + chr3.3:73367640-73367659 None:intergenic 35.0%
ACGGATAATTTCAGGAAAGT+GGG - chr3.3:73367988-73368007 MS.gene75424:intron 35.0%
AGGATGCTTCTTAAAAGACA+GGG - chr3.3:73365672-73365691 MS.gene75424:CDS 35.0%
ATAATGAGTGAGGAGATCTT+TGG - chr3.3:73368458-73368477 MS.gene75424:intron 35.0%
ATGGAGGAATAAAACTTCCT+AGG - chr3.3:73365718-73365737 MS.gene75424:intron 35.0%
CAACCAAAGTTATGGCTATT+AGG + chr3.3:73366036-73366055 None:intergenic 35.0%
CAATGCAGTAGTTTCATCAA+CGG + chr3.3:73367318-73367337 None:intergenic 35.0%
CATTGAGTGAAATGAAACCA+AGG + chr3.3:73366323-73366342 None:intergenic 35.0%
CGGAGTCCATTTAGTAAAAA+AGG + chr3.3:73366215-73366234 None:intergenic 35.0%
CTAAACAGTCTCAAGAATGT+TGG + chr3.3:73366854-73366873 None:intergenic 35.0%
CTGAAGGTCAACTTACAAAA+TGG + chr3.3:73366793-73366812 None:intergenic 35.0%
GAAGGAATTGAAACAATGGA+TGG - chr3.3:73366554-73366573 MS.gene75424:intron 35.0%
GAATCCAATGTAGTTGAGAA+TGG + chr3.3:73366264-73366283 None:intergenic 35.0%
GCTTTCCAATTCTGTCTTTA+AGG + chr3.3:73368171-73368190 None:intergenic 35.0%
GGATATATGCATTCATGGAA+AGG + chr3.3:73368810-73368829 None:intergenic 35.0%
GTAACTTGAAAATGCTATGC+AGG + chr3.3:73366116-73366135 None:intergenic 35.0%
GTAAGACACGAAGTTATGAA+TGG - chr3.3:73365111-73365130 MS.gene75424:CDS 35.0%
TCAATAATGAGTTAAGGGGA+AGG + chr3.3:73367933-73367952 None:intergenic 35.0%
TCATCTATAAGAGTTGTGGA+GGG - chr3.3:73367290-73367309 MS.gene75424:intron 35.0%
TCTTGACACAAGCAAATTAC+AGG - chr3.3:73368390-73368409 MS.gene75424:intron 35.0%
TGATGCCTTAAAGACAGAAT+TGG - chr3.3:73368163-73368182 MS.gene75424:intron 35.0%
TGCAATTGGTATGCCATTAT+TGG - chr3.3:73367438-73367457 MS.gene75424:intron 35.0%
TGCATTGTTGCAACAAAAGT+GGG - chr3.3:73367331-73367350 MS.gene75424:CDS 35.0%
TTAACAGAACAGAACCTTGT+TGG - chr3.3:73367056-73367075 MS.gene75424:intron 35.0%
TTCTGCTTTGTATCAGTGTA+AGG + chr3.3:73369021-73369040 None:intergenic 35.0%
TTTACTAGGTTACAGCTAGA+CGG - chr3.3:73367969-73367988 MS.gene75424:intron 35.0%
! AGATTCTCTGATAATGAGTG+AGG - chr3.3:73368448-73368467 MS.gene75424:intron 35.0%
! ATTGTTTTCAATGGCTATCC+AGG + chr3.3:73367738-73367757 None:intergenic 35.0%
! GAAGCGTCTAATACAATAGT+GGG + chr3.3:73368425-73368444 None:intergenic 35.0%
! GGGGTAAAATAAACCTTTTC+TGG + chr3.3:73366582-73366601 None:intergenic 35.0%
! TAATTTTAAGCACGGTCAAG+AGG + chr3.3:73366171-73366190 None:intergenic 35.0%
! TGAAGCGTCTAATACAATAG+TGG + chr3.3:73368426-73368445 None:intergenic 35.0%
! TGACGCTTTTACTCACAAAA+AGG - chr3.3:73368948-73368967 MS.gene75424:CDS 35.0%
! TGGTTCATACTTTGCCATTT+GGG - chr3.3:73368878-73368897 MS.gene75424:CDS 35.0%
! TTGTGAAGAATGTTTCTGCT+GGG - chr3.3:73368726-73368745 MS.gene75424:intron 35.0%
! TTTGTGAAGAATGTTTCTGC+TGG - chr3.3:73368725-73368744 MS.gene75424:intron 35.0%
!! AGTTCTTTACCGTGGTTTTA+CGG - chr3.3:73368972-73368991 MS.gene75424:CDS 35.0%
!! GAAGGCGCTAATTTATTCAA+TGG - chr3.3:73365699-73365718 MS.gene75424:intron 35.0%
!! GTATTGATTAAGGCCATGTT+TGG - chr3.3:73367670-73367689 MS.gene75424:intron 35.0%
!! TATCACCAGTCTGTTTTTCT+TGG - chr3.3:73367384-73367403 MS.gene75424:CDS 35.0%
!! TTATGAATGGAGAGTATCAC+AGG - chr3.3:73365124-73365143 MS.gene75424:CDS 35.0%
!! TTTGTGAGTAAAAGCGTCAA+AGG + chr3.3:73368947-73368966 None:intergenic 35.0%
!!! GATGCCCCATTGTTTTAAAT+TGG + chr3.3:73368577-73368596 None:intergenic 35.0%
!!! TTCTGATGGTTTTAGAACCA+CGG + chr3.3:73367213-73367232 None:intergenic 35.0%
!!! TTTTGGTTTTGTCGTGCAAT+TGG - chr3.3:73367424-73367443 MS.gene75424:intron 35.0%
AAAAAGGCAGTTCTTTACCG+TGG - chr3.3:73368964-73368983 MS.gene75424:CDS 40.0%
AAAAGACTTTGCCCCCAAAT+TGG - chr3.3:73368060-73368079 MS.gene75424:intron 40.0%
AAAAGGAAAGAGGTTGGACT+AGG + chr3.3:73366198-73366217 None:intergenic 40.0%
AAATACAAGTCACGGAAACC+AGG - chr3.3:73365652-73365671 MS.gene75424:CDS 40.0%
AACGTAATCAGGAGAAATGC+AGG + chr3.3:73368032-73368051 None:intergenic 40.0%
AAGTTGACCTTCAGCATGAT+TGG - chr3.3:73366799-73366818 MS.gene75424:CDS 40.0%
ACAGCTAGACGGATAATTTC+AGG - chr3.3:73367980-73367999 MS.gene75424:intron 40.0%
ACCATCCAAGAAAAACAGAC+TGG + chr3.3:73367392-73367411 None:intergenic 40.0%
AGGAAAATCTCCAACTGTTG+TGG - chr3.3:73367627-73367646 MS.gene75424:intron 40.0%
AGTCAAACCAATCATGCTGA+AGG + chr3.3:73366809-73366828 None:intergenic 40.0%
ATCTATAAGAGTTGTGGAGG+GGG - chr3.3:73367292-73367311 MS.gene75424:intron 40.0%
ATGACTAACACTACACCAAG+TGG + chr3.3:73366754-73366773 None:intergenic 40.0%
CACAATGCGCGATAAATCAT+TGG + chr3.3:73368219-73368238 None:intergenic 40.0%
CAGGATGCTTCTTAAAAGAC+AGG - chr3.3:73365671-73365690 MS.gene75424:CDS 40.0%
CATCTATAAGAGTTGTGGAG+GGG - chr3.3:73367291-73367310 MS.gene75424:intron 40.0%
CCTTCTCAGCTGAAGAAATT+GGG + chr3.3:73366602-73366621 None:intergenic 40.0%
CGCTGAAGGAATTGAAACAA+TGG - chr3.3:73366550-73366569 MS.gene75424:CDS 40.0%
CGGATAATTTCAGGAAAGTG+GGG - chr3.3:73367989-73368008 MS.gene75424:intron 40.0%
CGTAGCAGTTGAGAAAAACT+CGG - chr3.3:73366233-73366252 MS.gene75424:intron 40.0%
CTCATCTATAAGAGTTGTGG+AGG - chr3.3:73367289-73367308 MS.gene75424:intron 40.0%
CTGCATTGTTGCAACAAAAG+TGG - chr3.3:73367330-73367349 MS.gene75424:CDS 40.0%
CTTAAAAGACAGGGACAAGA+AGG - chr3.3:73365681-73365700 MS.gene75424:CDS 40.0%
CTTCTCAGCTGAAGAAATTG+GGG + chr3.3:73366601-73366620 None:intergenic 40.0%
CTTTCTTTCTTGCTTGGAAC+AGG - chr3.3:73368607-73368626 MS.gene75424:intron 40.0%
GAAATAGTACCTGAACCACT+TGG - chr3.3:73366736-73366755 MS.gene75424:intron 40.0%
GACGGATAATTTCAGGAAAG+TGG - chr3.3:73367987-73368006 MS.gene75424:intron 40.0%
GCTAAGACTTAGAACCTGAT+TGG + chr3.3:73367863-73367882 None:intergenic 40.0%
GGCGCTAATTTATTCAATGG+AGG - chr3.3:73365702-73365721 MS.gene75424:intron 40.0%
GGTACTATTTCAGCTGAAGA+AGG + chr3.3:73366727-73366746 None:intergenic 40.0%
GGTTGTTTATGGAGGTGAAA+AGG - chr3.3:73368298-73368317 MS.gene75424:intron 40.0%
GTACATCAGTGAAGAGTAGA+AGG + chr3.3:73366487-73366506 None:intergenic 40.0%
GTGGTTCATACTTTGCCATT+TGG - chr3.3:73368877-73368896 MS.gene75424:CDS 40.0%
TAGTGTTAGTCATCTCTGCT+TGG - chr3.3:73366761-73366780 MS.gene75424:CDS 40.0%
TCCATTGCTTCCCATTATCA+CGG - chr3.3:73368481-73368500 MS.gene75424:intron 40.0%
TCCTTCTCAGCTGAAGAAAT+TGG + chr3.3:73366603-73366622 None:intergenic 40.0%
TCGTAGACAACAGTTTCAAG+CGG + chr3.3:73365227-73365246 None:intergenic 40.0%
TGAAAATGCTATGCAGGCAT+TGG + chr3.3:73366110-73366129 None:intergenic 40.0%
TGAAGATCAGTCACAGAAGA+AGG - chr3.3:73365025-73365044 MS.gene75424:CDS 40.0%
TGACACAAGCAAATTACAGG+AGG - chr3.3:73368393-73368412 MS.gene75424:intron 40.0%
! CGAGTTTTTCTCAACTGCTA+CGG + chr3.3:73366235-73366254 None:intergenic 40.0%
! GAACTTATTAGGGAGGTACA+TGG - chr3.3:73367262-73367281 MS.gene75424:intron 40.0%
! GGTTCATACTTTGCCATTTG+GGG - chr3.3:73368879-73368898 MS.gene75424:CDS 40.0%
! GTTATTTCCTTCAGTTCTCC+TGG - chr3.3:73367717-73367736 MS.gene75424:intron 40.0%
! GTTCATACTTTGCCATTTGG+GGG - chr3.3:73368880-73368899 MS.gene75424:CDS 40.0%
! TAGGCGGCTAATTTTAAGCA+CGG + chr3.3:73366179-73366198 None:intergenic 40.0%
! TGTGAAGAATGTTTCTGCTG+GGG - chr3.3:73368727-73368746 MS.gene75424:intron 40.0%
! TTGTTCGTGCTCTTTTTGGA+TGG - chr3.3:73369079-73369098 MS.gene75424:CDS 40.0%
!! ACCAGTCTGTTTTTCTTGGA+TGG - chr3.3:73367388-73367407 MS.gene75424:CDS 40.0%
!! GAAGATGGTTGATGAACAAC+AGG - chr3.3:73365160-73365179 MS.gene75424:CDS 40.0%
!! GGTGAAAGCTCTTTTGAAGA+TGG - chr3.3:73365145-73365164 MS.gene75424:CDS 40.0%
!! GTTCTTTACCGTGGTTTTAC+GGG - chr3.3:73368973-73368992 MS.gene75424:CDS 40.0%
!! GTTTCTGGCAAGGTTGTTTA+TGG - chr3.3:73368287-73368306 MS.gene75424:intron 40.0%
!!! CTGTCTTTTAAGAAGCATCC+TGG + chr3.3:73365673-73365692 None:intergenic 40.0%
AAAAGTGGGACGGATAGTGA+TGG - chr3.3:73367561-73367580 MS.gene75424:CDS 45.0%
AAAGATGTTGGACGACGAGA+AGG - chr3.3:73368265-73368284 MS.gene75424:intron 45.0%
AACAACACCAGTAACATCGC+CGG + chr3.3:73369064-73369083 None:intergenic 45.0%
AACACTACACCAAGTGGTTC+AGG + chr3.3:73366748-73366767 None:intergenic 45.0%
AGATCAGTCACAGAAGAAGG+TGG - chr3.3:73365028-73365047 MS.gene75424:CDS 45.0%
AGCTCCAACAACTGGATCAA+GGG + chr3.3:73367174-73367193 None:intergenic 45.0%
AGTTACTCGCGAAATTCGCA+TGG - chr3.3:73366130-73366149 MS.gene75424:intron 45.0%
ATGCATCACCCGTAAAACCA+CGG + chr3.3:73368984-73369003 None:intergenic 45.0%
CACTGCTGGCGAACTTATTA+GGG - chr3.3:73367252-73367271 MS.gene75424:intron 45.0%
CAGAAGAAGGTGGTGTTTGA+CGG - chr3.3:73365038-73365057 MS.gene75424:CDS 45.0%
CAGAATTAAAGCTCACCCTC+AGG + chr3.3:73365091-73365110 None:intergenic 45.0%
CCCAATTTCTTCAGCTGAGA+AGG - chr3.3:73366599-73366618 MS.gene75424:intron 45.0%
CGTCAAAGGAGAATTTCCCA+TGG + chr3.3:73368933-73368952 None:intergenic 45.0%
GCTTGAAACTGTTGTCTACG+AGG - chr3.3:73365226-73365245 MS.gene75424:CDS 45.0%
TAGACAACAGTTTCAAGCGG+TGG + chr3.3:73365224-73365243 None:intergenic 45.0%
TAGCTCCAACAACTGGATCA+AGG + chr3.3:73367175-73367194 None:intergenic 45.0%
TATGAACCACAAGCTGCACA+AGG + chr3.3:73368867-73368886 None:intergenic 45.0%
TCACTGCTGGCGAACTTATT+AGG - chr3.3:73367251-73367270 MS.gene75424:intron 45.0%
TCTGGCAAGGTTGTTTATGG+AGG - chr3.3:73368290-73368309 MS.gene75424:intron 45.0%
TCTTTACCAAGCGAGCAAAG+TGG + chr3.3:73368250-73368269 None:intergenic 45.0%
TGCGTATTAGTGTGAGACTG+TGG - chr3.3:73366080-73366099 MS.gene75424:CDS 45.0%
TGCTCGCTTGGTAAAGATGT+TGG - chr3.3:73368253-73368272 MS.gene75424:intron 45.0%
TTCTAACCACTTTGCTCGCT+TGG - chr3.3:73368241-73368260 MS.gene75424:intron 45.0%
TTTCAAGCGGTGGTTTAGCA+AGG + chr3.3:73365214-73365233 None:intergenic 45.0%
! AGCTTCGATTTGATCAACGC+AGG - chr3.3:73368647-73368666 MS.gene75424:intron 45.0%
! CTGAGGGTGAGCTTTAATTC+TGG - chr3.3:73365089-73365108 MS.gene75424:CDS 45.0%
! GTGAAGAATGTTTCTGCTGG+GGG - chr3.3:73368728-73368747 MS.gene75424:intron 45.0%
! TTACGGGTGATGCATCGATA+AGG - chr3.3:73368989-73369008 MS.gene75424:CDS 45.0%
!! ACCGTGATAATGGGAAGCAA+TGG + chr3.3:73368485-73368504 None:intergenic 45.0%
!! CAGGTAATGGAAAAGTGGGA+CGG - chr3.3:73367551-73367570 MS.gene75424:CDS 45.0%
!! CTGTCTTTAAGGCATCAACC+TGG + chr3.3:73368160-73368179 None:intergenic 45.0%
!!! GGTGTTGTTCGTGCTCTTTT+TGG - chr3.3:73369075-73369094 MS.gene75424:CDS 45.0%
!!! TTTTAGAACCACGGCGTTTC+CGG + chr3.3:73367204-73367223 None:intergenic 45.0%
!!! AATTATAATTCATTTTTTTT+TGG - chr3.3:73365310-73365329 MS.gene75424:intron 5.0%
ACAATGGATGGCCCCAGAAA+AGG - chr3.3:73366566-73366585 MS.gene75424:intron 50.0%
ACACCTTACACCAGTCGTTC+TGG - chr3.3:73367597-73367616 MS.gene75424:intron 50.0%
AGTGGAATGGGTGCATACCA+TGG - chr3.3:73368913-73368932 MS.gene75424:CDS 50.0%
CCACAAGCTGCACAAGGAAA+AGG + chr3.3:73368861-73368880 None:intergenic 50.0%
CTCATGTGAAGTCACGCTGA+AGG - chr3.3:73366536-73366555 MS.gene75424:CDS 50.0%
CTGTCCCTTGATCCAGTTGT+TGG - chr3.3:73367167-73367186 MS.gene75424:intron 50.0%
CTTGGAACAGGTGAACAAGC+TGG - chr3.3:73368619-73368638 MS.gene75424:intron 50.0%
GAGGCTGGAGCAATTTCTGA+TGG + chr3.3:73367227-73367246 None:intergenic 50.0%
GCTGCTATAGCTCCAACAAC+TGG + chr3.3:73367182-73367201 None:intergenic 50.0%
GGAAAGTGGGGCTGTAACAA+TGG - chr3.3:73368001-73368020 MS.gene75424:intron 50.0%
GGCATCAACCTGGAAATGAG+AGG + chr3.3:73368150-73368169 None:intergenic 50.0%
GTGGAATGGGTGCATACCAT+GGG - chr3.3:73368914-73368933 MS.gene75424:CDS 50.0%
GTTGTTGGAGCTATAGCAGC+CGG - chr3.3:73367182-73367201 MS.gene75424:intron 50.0%
TGCTGGCGAACTTATTAGGG+AGG - chr3.3:73367255-73367274 MS.gene75424:intron 50.0%
TGGCTATCCAGGAGAACTGA+AGG + chr3.3:73367727-73367746 None:intergenic 50.0%
TTGGACGACGAGAAGGTTTC+TGG - chr3.3:73368272-73368291 MS.gene75424:intron 50.0%
! ACTTTGCCATTTGGGGGAGT+TGG - chr3.3:73368886-73368905 MS.gene75424:CDS 50.0%
! AGGAAAGAGGTTGGACTAGG+CGG + chr3.3:73366195-73366214 None:intergenic 50.0%
! CCTTTTCCTTGTGCAGCTTG+TGG - chr3.3:73368858-73368877 MS.gene75424:intron 50.0%
! TTGATGAAGGCTCTAGTCGC+CGG - chr3.3:73369042-73369061 MS.gene75424:CDS 50.0%
!! GGAGTTGGTGACAGTGGAAT+GGG - chr3.3:73368901-73368920 MS.gene75424:CDS 50.0%
!! GTTTGGTGCCTCTCATTTCC+AGG - chr3.3:73368139-73368158 MS.gene75424:intron 50.0%
AGTGGGACGGATAGTGATGG+CGG - chr3.3:73367564-73367583 MS.gene75424:CDS 55.0%
CTGTCACCAACTCCCCCAAA+TGG + chr3.3:73368895-73368914 None:intergenic 55.0%
GCTCCAGAACGACTGGTGTA+AGG + chr3.3:73367603-73367622 None:intergenic 55.0%
GGTGGTGTTTGACGGAGAAG+CGG - chr3.3:73365046-73365065 MS.gene75424:CDS 55.0%
! GTCGTTGGTGAAGGACCTGA+GGG - chr3.3:73365073-73365092 MS.gene75424:CDS 55.0%
!! ACACCAGTCGTTCTGGAGCT+TGG - chr3.3:73367604-73367623 MS.gene75424:intron 55.0%
!! CGACGAGAAGGTTTCTGGCA+AGG - chr3.3:73368277-73368296 MS.gene75424:intron 55.0%
!! GGGAGTTGGTGACAGTGGAA+TGG - chr3.3:73368900-73368919 MS.gene75424:CDS 55.0%
!! TTTGGGGGAGTTGGTGACAG+TGG - chr3.3:73368895-73368914 MS.gene75424:CDS 55.0%
CCTCCAAGCTCCAGAACGAC+TGG + chr3.3:73367610-73367629 None:intergenic 60.0%
CTAGTCGCCGGCGATGTTAC+TGG - chr3.3:73369054-73369073 MS.gene75424:CDS 60.0%
GTTCGCCAGCAGTGAAGACG+AGG + chr3.3:73367246-73367265 None:intergenic 60.0%
TATAGCAGCCGGAAACGCCG+TGG - chr3.3:73367193-73367212 MS.gene75424:intron 60.0%
TCCAGCCTCGTCTTCACTGC+TGG - chr3.3:73367238-73367257 MS.gene75424:intron 60.0%
! CGTCGTTGGTGAAGGACCTG+AGG - chr3.3:73365072-73365091 MS.gene75424:CDS 60.0%
!! CCAGTCGTTCTGGAGCTTGG+AGG - chr3.3:73367607-73367626 MS.gene75424:intron 60.0%
GCCAGCAGTGAAGACGAGGC+TGG + chr3.3:73367242-73367261 None:intergenic 65.0%
! AGCGGCGTCGTCGTTGGTGA+AGG - chr3.3:73365064-73365083 MS.gene75424:CDS 65.0%
CGGAGAAGCGGCGTCGTCGT+TGG - chr3.3:73365058-73365077 MS.gene75424:CDS 70.0%


Chromosome Type Strat End Strand Name
chr3.3 gene 73365017 73369107 73365017 ID=MS.gene75424
chr3.3 mRNA 73365017 73369107 73365017 ID=MS.gene75424.t1;Parent=MS.gene75424
chr3.3 exon 73368877 73369107 73368877 ID=MS.gene75424.t1.exon1;Parent=MS.gene75424.t1
chr3.3 CDS 73368877 73369107 73368877 ID=cds.MS.gene75424.t1;Parent=MS.gene75424.t1
chr3.3 exon 73367537 73367605 73367537 ID=MS.gene75424.t1.exon2;Parent=MS.gene75424.t1
chr3.3 CDS 73367537 73367605 73367537 ID=cds.MS.gene75424.t1;Parent=MS.gene75424.t1
chr3.3 exon 73367328 73367424 73367328 ID=MS.gene75424.t1.exon3;Parent=MS.gene75424.t1
chr3.3 CDS 73367328 73367424 73367328 ID=cds.MS.gene75424.t1;Parent=MS.gene75424.t1
chr3.3 exon 73366753 73366959 73366753 ID=MS.gene75424.t1.exon4;Parent=MS.gene75424.t1
chr3.3 CDS 73366753 73366959 73366753 ID=cds.MS.gene75424.t1;Parent=MS.gene75424.t1
chr3.3 exon 73366455 73366570 73366455 ID=MS.gene75424.t1.exon5;Parent=MS.gene75424.t1
chr3.3 CDS 73366455 73366570 73366455 ID=cds.MS.gene75424.t1;Parent=MS.gene75424.t1
chr3.3 exon 73366043 73366147 73366043 ID=MS.gene75424.t1.exon6;Parent=MS.gene75424.t1
chr3.3 CDS 73366043 73366147 73366043 ID=cds.MS.gene75424.t1;Parent=MS.gene75424.t1
chr3.3 exon 73365791 73365963 73365791 ID=MS.gene75424.t1.exon7;Parent=MS.gene75424.t1
chr3.3 CDS 73365791 73365963 73365791 ID=cds.MS.gene75424.t1;Parent=MS.gene75424.t1
chr3.3 exon 73365622 73365712 73365622 ID=MS.gene75424.t1.exon8;Parent=MS.gene75424.t1
chr3.3 CDS 73365622 73365712 73365622 ID=cds.MS.gene75424.t1;Parent=MS.gene75424.t1
chr3.3 exon 73365346 73365495 73365346 ID=MS.gene75424.t1.exon9;Parent=MS.gene75424.t1
chr3.3 CDS 73365346 73365495 73365346 ID=cds.MS.gene75424.t1;Parent=MS.gene75424.t1
chr3.3 exon 73365017 73365250 73365017 ID=MS.gene75424.t1.exon10;Parent=MS.gene75424.t1
chr3.3 CDS 73365017 73365250 73365017 ID=cds.MS.gene75424.t1;Parent=MS.gene75424.t1
Gene Sequence

>MS.gene75424

ATGTCGGGTGAAGATCAGTCACAGAAGAAGGTGGTGTTTGACGGAGAAGCGGCGTCGTCGTTGGTGAAGGACCTGAGGGTGAGCTTTAATTCTGGTAAGACACGAAGTTATGAATGGAGAGTATCACAGGTGAAAGCTCTTTTGAAGATGGTTGATGAACAACAGGATCAAATCATTGATGCTCTTCGTTCTGACCTTGCTAAACCACCGCTTGAAACTGTTGTCTACGAGGTACCTAATTTCATGTTTAAGTTGCTTTCATATATATATGATTTTTATGGTCTCTCTTTTTAAATTATAATTCATTTTTTTTTGGTACGTGCAATTGAAATCGATAGAAGAGCTAGAGAATCAAGTTTTTTGTTATAACATAAACATCATAAGTTTTCAAGGCTGAGATATTCTTGAGATTTTTCATTTGGAGTCACTATTATGATGGCAACCGTTCCGACGATACAATTACTTTGATTTTTTTTCCTTGTATGACGTCAATATTTTATGTTTTCTTTAATAAAGGAGGAAACATGCTTTTCACTTTTTCCCTTCAAAAAGAAAAATGCTTTTCACCTTCTTTTTTTTTTACGGAACATGCTTTTCACTTGAACGATCACATTAAAGTTACTTCACAATCACGTAAATACAAGTCACGGAAACCAGGATGCTTCTTAAAAGACAGGGACAAGAAGGCGCTAATTTATTCAATGGAGGAATAAAACTTCCTAGGCATAATAAATTGGTTTGGTTTGGTTTTTATGAGAAAATATATCTAAATCAATTTGTTAGGAAATTTGAAAGTTAGTAGATAATTTGACCAATAGTTTTCGATATATAGTGATACTCTTTCTTTCAAATGATCGATCAAAGAATTGTGAGAACTAAAGTGTTTTGGAAAATATAAGTAAAAGGTGTATGTAAAATAAGGGTAAATTACAAGAAAAATAAACTTTGATTGACTGGTGTGTATGTAAAATGTTTTTTACAATGAGTAGTTGGAGATAAAAATGTTAAAGCTAAATCCTAATAGCCATAACTTTGGTTGACACAATATGCGCTCAGCTCAACTTGCGTATTAGTGTGAGACTGTGGCATGCCAATGCCTGCATAGCATTTTCAAGTTACTCGCGAAATTCGCATGGTCATCTGTGAGTGTGCCTCTTGACCGTGCTTAAAATTAGCCGCCTAGTCCAACCTCTTTCCTTTTTTACTAAATGGACTCCGTAGCAGTTGAGAAAAACTCGGTTATACCATTCTCAACTACATTGGATTCAACTTAAAATATTTTTGGGTTTAAAAATTTAGTATCCCTTGGTTTCATTTCACTCAATGACACCGCTTTCCATAAATTCAAAATAGAGTAACCGAACATTTTGTAACATTTGTAACTAAACAAACATATTTTGGATGAATACAACTAAGCAATTGACAGGTCAATGTTGCAATCAATACAACTATAATAAAGATAATTTTCCTTCTACTCTTCACTGATGTACTTTGTTTTGCAGATTGGTATGTTTAAAAACTCATGTGAAGTCACGCTGAAGGAATTGAAACAATGGATGGCCCCAGAAAAGGTTTATTTTACCCCAATTTCTTCAGCTGAGAAGGACATTTTTCATTTATATTTCTTATATATAGTTTATTTGAATATTTTTATAACAAAAAGTTCCTTTAATAATATTTCAGGCTAAAACTTCAATCACAACTTTTCCTTCTTCAGCTGAAATAGTACCTGAACCACTTGGTGTAGTGTTAGTCATCTCTGCTTGGAACTATCCATTTTGTAAGTTGACCTTCAGCATGATTGGTTTGACTTATTTGAGTTTATTTACTTACACCAACATTCTTGAGACTGTTTAGTAGAACTTATATTGAAACAACTTATATGCAAGTCTACAAGCTGTTTTTGACTTATTTCCATAAATTTTTCACGATATCTTATAAAAACAGTTTGACTTTATTTTACCTTTTGTTATACAAATGGCTTATACATAGACACTTATATGATAAATGTGTATGCTATAAACACTTCATTCAGTTGTTTAACAGAACAGAACCTTGTTGGTTGTATTTGAGTTAATATTTTGAGCCTTTAGTTTCTTTAATAATCTATGAAGACTATAATATCACTCTCTCTGTCTGTCTTTTCAGTGCTGTCCCTTGATCCAGTTGTTGGAGCTATAGCAGCCGGAAACGCCGTGGTTCTAAAACCATCAGAAATTGCTCCAGCCTCGTCTTCACTGCTGGCGAACTTATTAGGGAGGTACATGGATAACTCATCTATAAGAGTTGTGGAGGGGGCCGTTGATGAAACTACTGCATTGTTGCAACAAAAGTGGGACAAAATTTTGTATACAGGTTGGTCTTGTTTATCACCAGTCTGTTTTTCTTGGATGGTTATGAATTGTTATTTTGGTTTTGTCGTGCAATTGGTATGCCATTATTGGTATTGTGAATTTTGAAATCTCATCTCAGATAATCAAATAAATACATCATTTGAACAAAAGATTGCATAGCATAAGTAATTACTTGATTTTCAGGTAATGGAAAAGTGGGACGGATAGTGATGGCGGCTGCTGCAAAACACCTTACACCAGTCGTTCTGGAGCTTGGAGGAAAATCTCCAACTGTTGTGGATTCAAATGTCAATTTAGAGGTATTGATTAAGGCCATGTTTGGATTGACTTATTAAGTTGTTATCAAGTTATTTCCTTCAGTTCTCCTGGATAGCCATTGAAAACAATTTAACTTTATTTTATCTTTTATTATAAAAAAACCTTACACATGAAAGCAATATGACAAATCGACAAGTGTTTATGTTATAAGCGTTTAATTAAATTTTTCATCCAATCAGGTTCTAAGTCTTAGCCTTCTTTTTTATTTTCCAGTCAGTAACTAGTTATATCACTTTGATCTCCTTCCCCTTAACTCATTATTGACTTAAATTAATTTGTGTTTACTAGGTTACAGCTAGACGGATAATTTCAGGAAAGTGGGGCTGTAACAATGGACAAGCCTGCATTTCTCCTGATTACGTTATAACAACAAAAGACTTTGCCCCCAAATTGGTATGAAATTTTCCCTCGTTGTTAAGAGTTCTAAATATCTGTCTTTGTGTATCTAATGTTTGGTGCCTCTCATTTCCAGGTTGATGCCTTAAAGACAGAATTGGAAAGCTTCTTTGGAAAGAATCCAATAGAATCCAATGATTTATCGCGCATTGTGAGTTCTAACCACTTTGCTCGCTTGGTAAAGATGTTGGACGACGAGAAGGTTTCTGGCAAGGTTGTTTATGGAGGTGAAAAGGATGAAAACAAACTGTAAGCTCTCCTCTTAATTCAAGTTTAGTAGGTTTTATATACTGCAATGCAATGGATCTTGACACAAGCAAATTACAGGAGGATTGCTCCCACTATTGTATTAGACGCTTCACAAGATTCTCTGATAATGAGTGAGGAGATCTTTGGTCCATTGCTTCCCATTATCACGGTAAGAATAAAAGACAAAGAACTCTTTGAAAAGTACTCAAATATTCATCGATAAGCTTCATTAGCTTGTATCCAATTTAAAACAATGGGGCATCAATTATAATACTTTCTTTCTTGCTTGGAACAGGTGAACAAGCTGGAAGAAAGCTTCGATTTGATCAACGCAGGAACAAAGCCACTTGCTGCATATTTATTTACAAATGACAACAAGTTCAAGGAGCAATTTGTGAAGAATGTTTCTGCTGGGGGTTTGCTTATCAATGACACTGTCTTACATGTAATAGTTTGTTTTTTATTTTCTAAAACCTTTCCATGAATGCATATATCCTTATCATGCAATGTTACTTATATCTTTTCCTTTTCCTTGTGCAGCTTGTGGTTCATACTTTGCCATTTGGGGGAGTTGGTGACAGTGGAATGGGTGCATACCATGGGAAATTCTCCTTTGACGCTTTTACTCACAAAAAGGCAGTTCTTTACCGTGGTTTTACGGGTGATGCATCGATAAGGTACCCGCCTTACACTGATACAAAGCAGAAATTGATGAAGGCTCTAGTCGCCGGCGATGTTACTGGTGTTGTTCGTGCTCTTTTTGGATGGTCCTAA
Protein sequence

>MS.gene75424.t1

MSGEDQSQKKVVFDGEAASSLVKDLRVSFNSGKTRSYEWRVSQVKALLKMVDEQQDQIIDALRSDLAKPPLETVVYEIGMFKNSCEVTLKELKQWMAPEKAKTSITTFPSSAEIVPEPLGVVLVISAWNYPFLLSLDPVVGAIAAGNAVVLKPSEIAPASSSLLANLLGRYMDNSSIRVVEGAVDETTALLQQKWDKILYTGNGKVGRIVMAAAAKHLTPVVLELGGKSPTVVDSNVNLEVTARRIISGKWGCNNGQACISPDYVITTKDFAPKLVDALKTELESFFGKNPIESNDLSRIVSSNHFARLVKMLDDEKVSGKVVYGGEKDENKLRIAPTIVLDASQDSLIMSEEIFGPLLPIITVNKLEESFDLINAGTKPLAAYLFTNDNKFKEQFVKNVSAGGLLINDTVLHLVVHTLPFGGVGDSGMGAYHGKFSFDAFTHKKAVLYRGFTGDASIRYPPYTDTKQKLMKALVAGDVTGVVRALFGWS