AlfalfaGEDB | MS.gene75437

M. sativa cultivar XinJiangDaYe / MS.gene75437

KEGG: K14431
GO: GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0006139 GO:0006351 GO:0006355 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0031323 GO:0031326 GO:0032774 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043565 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0046483 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:0097659 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1903506 GO:2000112 GO:2001141
PFAM: PF00170.24 PF14144.9

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene75437.t1	XP_003602022.1	99.7	363	1	0	1	363	1	363	1.90E-199	704.9

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene75437.t1	Q39237	68.1	367	112	2	1	362	1	367	8.4e-135	481.5

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene75437.t1	G7J4F0	99.7	363	1	0	1	363	1	363	1.4e-199	704.9

TFs/TRs:

Gene ID	Type	Classification
MS.gene75437.t1	TF	bZIP

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene04918	MS.gene75437	0.801599	8.35E-49	-1.69E-46
MS.gene049499	MS.gene75437	0.803701	3.07E-49	-1.69E-46
MS.gene049983	MS.gene75437	0.812451	4.21E-51	-1.69E-46
MS.gene050238	MS.gene75437	0.802537	5.35E-49	-1.69E-46
MS.gene050646	MS.gene75437	0.807044	6.13E-50	-1.69E-46
MS.gene052516	MS.gene75437	0.814686	1.36E-51	-1.69E-46
MS.gene055464	MS.gene75437	0.830155	3.44E-55	-1.69E-46
MS.gene05686	MS.gene75437	0.817408	3.35E-52	-1.69E-46
MS.gene057132	MS.gene75437	0.812746	3.63E-51	-1.69E-46
MS.gene058781	MS.gene75437	0.821672	3.56E-53	-1.69E-46
MS.gene058783	MS.gene75437	0.838472	2.82E-57	-1.69E-46
MS.gene060935	MS.gene75437	0.80443	2.17E-49	-1.69E-46
MS.gene060937	MS.gene75437	0.802284	6.03E-49	-1.69E-46
MS.gene061100	MS.gene75437	0.815418	9.34E-52	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene75437	MS.gene045075	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene75437.t1	MTR_3g087940	99.725	363	1	0	1	363	1	363	0.0	754
MS.gene75437.t1	MTR_8g091650	69.122	353	101	4	12	363	13	358	1.31e-177	497
MS.gene75437.t1	MTR_8g091650	62.725	389	101	5	12	363	13	394	1.87e-170	481
MS.gene75437.t1	MTR_8g091650	72.632	285	77	1	79	363	2	285	4.43e-154	435
MS.gene75437.t1	MTR_8g040120	56.575	327	124	4	43	361	150	466	1.69e-118	351
MS.gene75437.t1	MTR_7g089800	59.000	300	110	3	70	361	129	423	2.89e-114	339
MS.gene75437.t1	MTR_3g073560	49.713	348	170	2	14	359	1	345	3.87e-114	344
MS.gene75437.t1	MTR_7g089800	59.000	300	110	3	70	361	158	452	6.30e-114	339
MS.gene75437.t1	MTR_5g060950	49.858	351	165	3	14	358	1	346	2.83e-113	334
MS.gene75437.t1	MTR_5g054900	55.556	306	124	3	64	361	52	353	6.24e-111	328
MS.gene75437.t1	MTR_5g054900	55.556	306	124	3	64	361	133	434	4.69e-110	328
MS.gene75437.t1	MTR_2g086420	54.795	292	120	4	73	361	186	468	8.36e-109	327
MS.gene75437.t1	MTR_2g086420	54.795	292	120	4	73	361	187	469	8.52e-109	327
MS.gene75437.t1	MTR_5g054900	54.575	306	123	4	64	361	52	349	2.21e-106	316
MS.gene75437.t1	MTR_7g092750	50.641	312	147	2	57	361	51	362	5.16e-105	313
MS.gene75437.t1	MTR_5g054900	54.575	306	123	4	64	361	163	460	5.91e-105	316
MS.gene75437.t1	MTR_7g092750	50.641	312	147	2	57	361	152	463	5.69e-104	314
MS.gene75437.t1	MTR_4g053250	46.991	349	155	6	30	361	126	461	2.49e-103	313
MS.gene75437.t1	MTR_1g111310	55.401	287	124	2	79	361	421	707	4.87e-101	313
MS.gene75437.t1	MTR_1g111310	53.929	280	119	2	79	355	54	326	1.20e-87	279
MS.gene75437.t1	MTR_7g092750	45.833	312	136	3	57	361	152	437	1.87e-89	276
MS.gene75437.t1	MTR_0126s0080	50.769	260	119	3	64	314	200	459	1.31e-79	251
MS.gene75437.t1	MTR_3g044820	57.229	166	60	3	79	235	45	208	1.66e-59	191
MS.gene75437.t1	MTR_1g090370	39.303	201	97	5	160	354	47	228	5.24e-35	128
MS.gene75437.t1	MTR_1g111320	60.000	70	27	1	79	147	146	215	1.18e-17	81.3
MS.gene75437.t1	MTR_8g094690	25.957	235	139	5	150	349	14	248	1.54e-15	76.3
MS.gene75437.t1	MTR_7g068860	24.651	215	152	5	147	351	5	219	1.72e-14	72.4
MS.gene75437.t1	MTR_2g076140	23.182	220	135	3	151	350	4	209	4.67e-12	65.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene75437.t1	AT5G65210	67.935	368	113	2	1	363	1	368	0.0	518
MS.gene75437.t1	AT5G65210	67.935	368	113	2	1	363	1	368	0.0	518
MS.gene75437.t1	AT5G65210	67.935	368	113	2	1	363	1	368	0.0	518
MS.gene75437.t1	AT5G65210	67.935	368	113	2	1	363	1	368	0.0	518
MS.gene75437.t1	AT5G65210	67.935	368	113	2	1	363	1	368	0.0	518
MS.gene75437.t1	AT5G65210	67.935	368	113	2	1	363	1	368	0.0	518
MS.gene75437.t1	AT5G10030	68.767	365	111	2	1	363	1	364	0.0	511
MS.gene75437.t1	AT5G10030	68.767	365	111	2	1	363	1	364	0.0	511
MS.gene75437.t1	AT5G10030	68.767	365	111	2	1	363	1	364	0.0	511
MS.gene75437.t1	AT5G10030	68.767	365	111	2	1	363	1	364	0.0	511
MS.gene75437.t1	AT5G10030	68.767	365	111	2	1	363	1	364	0.0	511
MS.gene75437.t1	AT5G65210	73.401	297	77	1	69	363	2	298	9.66e-162	455
MS.gene75437.t1	AT1G77920	57.029	377	135	7	2	363	4	368	7.83e-144	412
MS.gene75437.t1	AT1G22070	56.831	366	142	4	12	361	17	382	7.28e-137	395
MS.gene75437.t1	AT5G06950	59.862	289	106	2	79	361	46	330	8.11e-115	337
MS.gene75437.t1	AT5G06950	59.862	289	106	2	79	361	46	330	8.11e-115	337
MS.gene75437.t1	AT5G06950	59.862	289	106	2	79	361	46	330	8.11e-115	337
MS.gene75437.t1	AT5G06950	59.862	289	106	2	79	361	46	330	8.11e-115	337
MS.gene75437.t1	AT5G06950	59.862	289	106	2	79	361	46	330	8.11e-115	337
MS.gene75437.t1	AT3G12250	54.573	328	130	4	49	361	7	330	8.62e-114	334
MS.gene75437.t1	AT3G12250	54.573	328	130	4	49	361	7	330	8.62e-114	334
MS.gene75437.t1	AT3G12250	54.573	328	130	4	49	361	7	330	8.62e-114	334
MS.gene75437.t1	AT3G12250	54.573	328	130	4	49	361	7	330	8.62e-114	334
MS.gene75437.t1	AT3G12250	55.627	311	128	2	57	361	18	324	8.10e-113	332
MS.gene75437.t1	AT3G12250	57.525	299	113	3	73	361	9	303	1.34e-112	330
MS.gene75437.t1	AT5G06960	59.170	289	108	2	79	361	26	310	3.19e-112	330
MS.gene75437.t1	AT5G06960	59.170	289	108	2	79	361	46	330	3.62e-112	330
MS.gene75437.t1	AT5G06960	59.170	289	108	2	79	361	46	330	3.62e-112	330
MS.gene75437.t1	AT3G12250	55.627	311	128	2	57	361	49	355	5.13e-112	331
MS.gene75437.t1	AT1G08320	56.446	287	110	3	79	361	54	329	6.33e-111	328
MS.gene75437.t1	AT1G08320	56.446	287	110	3	79	361	54	329	6.33e-111	328
MS.gene75437.t1	AT1G08320	56.446	287	110	3	79	361	178	453	2.38e-109	328
MS.gene75437.t1	AT1G08320	56.446	287	110	3	79	361	178	453	2.38e-109	328
MS.gene75437.t1	AT1G08320	56.446	287	110	3	79	361	178	453	2.38e-109	328
MS.gene75437.t1	AT5G06839	49.846	325	146	4	52	361	93	415	5.11e-103	310
MS.gene75437.t1	AT5G06839	49.693	326	146	4	52	361	93	416	5.27e-103	310
MS.gene75437.t1	AT5G06839	53.020	298	125	3	79	361	161	458	7.10e-103	311
MS.gene75437.t1	AT1G68640	52.922	308	136	3	61	361	147	452	7.56e-99	300
MS.gene75437.t1	AT1G58330	26.126	222	151	4	143	351	2	223	9.66e-19	84.3
MS.gene75437.t1	AT3G14880	26.126	222	129	7	147	343	6	217	2.06e-13	69.7
MS.gene75437.t1	AT3G14880	25.328	229	129	7	147	343	6	224	1.60e-12	67.0

Find 84 sgRNAs with CRISPR-Local

Find 141 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AGCTCGATGTTTGCTTGCTT+TGG	0.213054	3.3:+73251390	MS.gene75437:CDS
TTGATTTAATTGCAGATTCT+TGG	0.226068	3.3:+73250788	MS.gene75437:intron
AAAACTGCAGGGAATGTATA+TGG	0.249625	3.3:+73250141	MS.gene75437:intron
CAAGTCCGCCTCATCAATTA+AGG	0.315142	3.3:-73249483	None:intergenic
TTCTCATTTCCGAGATTTGC+CGG	0.317139	3.3:-73250367	None:intergenic
GCAGCCTTTGAGATGGAGTA+TGG	0.346430	3.3:+73250323	MS.gene75437:CDS
GCTCGATGTTTGCTTGCTTT+GGG	0.348084	3.3:+73251391	MS.gene75437:CDS
CATGTTCTAACCTTATCAAT+AGG	0.384759	3.3:-73249681	None:intergenic
TCTGTCAATGGTTCAATCAT+TGG	0.390810	3.3:-73250812	None:intergenic
CATACTTGTTAGATGTTCCT+AGG	0.414801	3.3:-73249641	None:intergenic
CGCAGTTTGTTTCCTCGAGA+AGG	0.425566	3.3:+73249378	MS.gene75437:CDS
GTGTTCGCGACATTTGTTGC+AGG	0.426714	3.3:-73251351	None:intergenic
GGCTCTTACGAGCAGCTTCT+CGG	0.427961	3.3:-73249827	None:intergenic
CTTCTCCCCACATATTAATC+TGG	0.429966	3.3:-73249424	None:intergenic
CACATATTAATCTGGTGAAT+AGG	0.436108	3.3:-73249416	None:intergenic
TTTAACAGGCTGACCATCTT+CGG	0.437689	3.3:+73251320	MS.gene75437:intron
AACAAGACTAAGCAGGTTCT+CGG	0.440007	3.3:-73251465	None:intergenic
ATTGGGTTGATGAGCAAAAC+CGG	0.440031	3.3:+73250348	MS.gene75437:CDS
AATGTATATGGGTGGTGGGT+TGG	0.443309	3.3:+73250153	MS.gene75437:CDS
ACAAGACTAAGCAGGTTCTC+GGG	0.443620	3.3:-73251464	None:intergenic
CTTGAAGTTTGATAGTAGTC+AGG	0.454381	3.3:+73249502	MS.gene75437:CDS
TTCGATAGATTTCAGCATAG+TGG	0.456188	3.3:-73250451	None:intergenic
AATCGTTGTTGCTCTGTCAA+TGG	0.456266	3.3:-73250824	None:intergenic
TCTTGTGAGCTTTGTGAACC+AGG	0.458406	3.3:+73251009	MS.gene75437:CDS
AGCTCAAAGCCCTCAGGCGT+TGG	0.459290	3.3:-73251423	None:intergenic
GAGCTCAGGATGCTGGTTGA+TGG	0.463581	3.3:+73250419	MS.gene75437:CDS
TGAGATGGAGTATGGACATT+GGG	0.465713	3.3:+73250331	MS.gene75437:CDS
TGAGGGCTTTGAGCTCACTA+TGG	0.474812	3.3:+73251431	MS.gene75437:CDS
TCGTTTGAAGTTAGTGCAGT+TGG	0.476876	3.3:+73249983	MS.gene75437:CDS
TTTGCTGGACCTGTGAATCC+AGG	0.482156	3.3:+73250193	MS.gene75437:CDS
CGCCTCATCAATTAAGGGAA+TGG	0.487369	3.3:-73249477	None:intergenic
GTTTCTCCATGCCTTGTGAA+AGG	0.488025	3.3:-73250892	None:intergenic
GATGCTTCTCATGGTATCCT+AGG	0.490549	3.3:+73249624	MS.gene75437:CDS
TTTCTCCATGCCTTGTGAAA+GGG	0.491745	3.3:-73250891	None:intergenic
AGCTAATAGACCTATTGATA+AGG	0.501170	3.3:+73249671	MS.gene75437:CDS
CTCGCTGATAGCGTAGCAGC+TGG	0.502070	3.3:+73250926	MS.gene75437:CDS
CAGGGAATGTATATGGGTGG+TGG	0.504131	3.3:+73250148	MS.gene75437:intron
GCAGGGTTTCCTGCCGAAGA+TGG	0.504684	3.3:-73251333	None:intergenic
AAGTCCGCCTCATCAATTAA+GGG	0.508625	3.3:-73249482	None:intergenic
ATTGACAGAGCAACAACGAT+TGG	0.518816	3.3:+73250826	MS.gene75437:CDS
ACAAACCAACCTGGATTCAC+AGG	0.524884	3.3:-73250202	None:intergenic
TCGCCCTTCTGAGCTTCTCA+AGG	0.526161	3.3:+73250568	MS.gene75437:CDS
TGACATAGAGCTCAGGATGC+TGG	0.526532	3.3:+73250412	MS.gene75437:CDS
ACAGGCTGACCATCTTCGGC+AGG	0.532331	3.3:+73251324	MS.gene75437:intron
CAGATTAATATGTGGGGAGA+AGG	0.534968	3.3:+73249425	MS.gene75437:CDS
ATCACCTTGAGAAGCTCAGA+AGG	0.537726	3.3:-73250572	None:intergenic
TCCACAGATGGCTACTGCAA+TGG	0.537758	3.3:+73250973	MS.gene75437:CDS
AGAATATTTCCAACGCCTGA+GGG	0.537877	3.3:+73251414	MS.gene75437:CDS
AGGAATTGCAGCCTTTGAGA+TGG	0.538267	3.3:+73250316	MS.gene75437:intron
AAACTGCAGGGAATGTATAT+GGG	0.538541	3.3:+73250142	MS.gene75437:intron
TGAGCAAAACCGGCAAATCT+CGG	0.539595	3.3:+73250358	MS.gene75437:CDS
AGATGCCCTTTCACAAGGCA+TGG	0.540096	3.3:+73250886	MS.gene75437:CDS
TGTTCGCGACATTTGTTGCA+GGG	0.550819	3.3:-73251350	None:intergenic
GCTCGAACGTGTTAGACAGC+AGG	0.550918	3.3:+73250013	MS.gene75437:CDS
TATTCACCAGATTAATATGT+GGG	0.557449	3.3:+73249418	MS.gene75437:CDS
TTGAGATGGAGTATGGACAT+TGG	0.559206	3.3:+73250330	MS.gene75437:CDS
CTATTCACCAGATTAATATG+TGG	0.559375	3.3:+73249417	MS.gene75437:CDS
ATAGTGAGCTCAAAGCCCTC+AGG	0.562814	3.3:-73251429	None:intergenic
GCAGCTGGACAATTCATTGA+AGG	0.563520	3.3:+73250941	MS.gene75437:CDS
AGGGAATGTATATGGGTGGT+GGG	0.568452	3.3:+73250149	MS.gene75437:intron
GAGAATATTTCCAACGCCTG+AGG	0.568747	3.3:+73251413	MS.gene75437:CDS
GAGGAAACAAACTGCGCAGA+CGG	0.571244	3.3:-73249371	None:intergenic
GGAGAAGGCTTCAAAAGTAA+TGG	0.571903	3.3:+73249440	MS.gene75437:CDS
ATATTAGTGACATAGAGCTC+AGG	0.575422	3.3:+73250405	MS.gene75437:CDS
CTTGTTGACATGATTGTCCA+AGG	0.580404	3.3:-73250859	None:intergenic
TCCATTGCAGTAGCCATCTG+TGG	0.581181	3.3:-73250974	None:intergenic
ATCCATTCCCTTAATTGATG+AGG	0.582525	3.3:+73249475	MS.gene75437:CDS
TAGTCAGAGGATGCTTCTCA+TGG	0.584672	3.3:+73249615	MS.gene75437:intron
CGATTGGATATCGATAACCT+TGG	0.584683	3.3:+73250842	MS.gene75437:CDS
AGGAACTTATATTCCACAGA+TGG	0.586141	3.3:+73250961	MS.gene75437:CDS
CATTCCCTTAATTGATGAGG+CGG	0.591538	3.3:+73249478	MS.gene75437:CDS
GCAGAAGATGCCCTTTCACA+AGG	0.607214	3.3:+73250881	MS.gene75437:CDS
GTCTTGCAACAAGACTAAGC+AGG	0.618652	3.3:-73251472	None:intergenic
CAAGACTAAGCAGGTTCTCG+GGG	0.624393	3.3:-73251463	None:intergenic
GCAAACATCGAGCTGACTGA+CGG	0.633030	3.3:-73251381	None:intergenic
GATTAAATATGCAGATACAA+AGG	0.638966	3.3:+73249790	MS.gene75437:intron
ATGTCCATACTCCATCTCAA+AGG	0.641308	3.3:-73250327	None:intergenic
TTTATGTGATGTCCGGCATG+TGG	0.642596	3.3:+73250504	MS.gene75437:CDS
ATACACACTCATCCTTCTCG+AGG	0.650671	3.3:-73249390	None:intergenic
CACAAGGCATGGAGAAACTG+CGG	0.659798	3.3:+73250897	MS.gene75437:CDS
TCACCTTGAGAAGCTCAGAA+GGG	0.664994	3.3:-73250571	None:intergenic
CTGCAGGGAATGTATATGGG+TGG	0.681880	3.3:+73250145	MS.gene75437:intron
ATTCACCAGATTAATATGTG+GGG	0.681960	3.3:+73249419	MS.gene75437:CDS
GTCCGGCATGTGGAAAACAA+CGG	0.755517	3.3:+73250514	MS.gene75437:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TTTATTAAATTGAAAAGTAA+TGG	-	chr3.3:73251059-73251078	None:intergenic	10.0%
!!	TTTAATTCCATATTCAATTA+TGG	+	chr3.3:73250725-73250744	MS.gene75437:intron	15.0%
!!!	GTATATGTTTATTTTATAAC+CGG	+	chr3.3:73251211-73251230	MS.gene75437:intron	15.0%
!!!	TATATGTTTATTTTATAACC+GGG	+	chr3.3:73251212-73251231	MS.gene75437:intron	15.0%
!!	AAATTTATAATGTAGTATGG+TGG	+	chr3.3:73250754-73250773	MS.gene75437:intron	20.0%
!!	AGTTAAATATGTGATTCTAA+TGG	-	chr3.3:73251290-73251309	None:intergenic	20.0%
!!	GACAAATTTATAATGTAGTA+TGG	+	chr3.3:73250751-73250770	MS.gene75437:intron	20.0%
!!	GATAATAAGTTAGTGATAAA+TGG	-	chr3.3:73251133-73251152	None:intergenic	20.0%
!!	TATAAAACATGAATCCAATT+TGG	-	chr3.3:73249590-73249609	None:intergenic	20.0%
!	AAACATACATGATTTGATCA+CGG	-	chr3.3:73251175-73251194	None:intergenic	25.0%
!	ATTCTGCTTATTAACCAAAT+TGG	+	chr3.3:73249573-73249592	MS.gene75437:intron	25.0%
!	GAACATGAAGAATTTGTATT+CGG	+	chr3.3:73249697-73249716	MS.gene75437:intron	25.0%
!	GATTAAATATGCAGATACAA+AGG	+	chr3.3:73249790-73249809	MS.gene75437:intron	25.0%
!	TATTCACCAGATTAATATGT+GGG	+	chr3.3:73249418-73249437	MS.gene75437:CDS	25.0%
!	TTGATTTAATTGCAGATTCT+TGG	+	chr3.3:73250788-73250807	MS.gene75437:intron	25.0%
!!	TCTAATAATATGTGTTTTGC+TGG	+	chr3.3:73250178-73250197	MS.gene75437:CDS	25.0%
	ACATCCAAAATTTGAAAGCA+TGG	-	chr3.3:73249747-73249766	None:intergenic	30.0%
	AGCTAATAGACCTATTGATA+AGG	+	chr3.3:73249671-73249690	MS.gene75437:CDS	30.0%
	ATTCACCAGATTAATATGTG+GGG	+	chr3.3:73249419-73249438	MS.gene75437:CDS	30.0%
	CACATATTAATCTGGTGAAT+AGG	-	chr3.3:73249419-73249438	None:intergenic	30.0%
	CATGTTCTAACCTTATCAAT+AGG	-	chr3.3:73249684-73249703	None:intergenic	30.0%
	CTATTCACCAGATTAATATG+TGG	+	chr3.3:73249417-73249436	MS.gene75437:CDS	30.0%
	GTCTTAATGTGAGAAAGAAT+GGG	+	chr3.3:73250670-73250689	MS.gene75437:intron	30.0%
	GTTATCCATAGAATGATAGA+AGG	+	chr3.3:73250626-73250645	MS.gene75437:intron	30.0%
	TAATGGTTATCAAGAAAGCT+AGG	-	chr3.3:73251042-73251061	None:intergenic	30.0%
	TGTCATGCCATAATTGAATA+TGG	-	chr3.3:73250735-73250754	None:intergenic	30.0%
	TGTCTTAATGTGAGAAAGAA+TGG	+	chr3.3:73250669-73250688	MS.gene75437:intron	30.0%
	TTTCTATCACTTTATGTCAC+CGG	+	chr3.3:73250076-73250095	MS.gene75437:intron	30.0%
!	GAAAGATTTTTCTTGTGGAT+CGG	+	chr3.3:73250539-73250558	MS.gene75437:CDS	30.0%
!	GATACCATGCTTTCAAATTT+TGG	+	chr3.3:73249740-73249759	MS.gene75437:intron	30.0%
!	GTTTTATAATGCTTAGTCAG+AGG	+	chr3.3:73249602-73249621	MS.gene75437:intron	30.0%
!!	CAAAGGTTGATTTGTTTCAT+TGG	+	chr3.3:73249535-73249554	MS.gene75437:intron	30.0%
!!!	CAAGCTATTTTTTTCAGAAG+GGG	-	chr3.3:73251266-73251285	None:intergenic	30.0%
!!!	CCAAGCTATTTTTTTCAGAA+GGG	-	chr3.3:73251267-73251286	None:intergenic	30.0%
!!!	GATGTTTTTTATGTGATGTC+CGG	+	chr3.3:73250497-73250516	MS.gene75437:CDS	30.0%
!!!	TTAAAACCTTTTTTCGCAGA+CGG	-	chr3.3:73249851-73249870	None:intergenic	30.0%
	AAAACTGCAGGGAATGTATA+TGG	+	chr3.3:73250141-73250160	MS.gene75437:intron	35.0%
	AAACTGCAGGGAATGTATAT+GGG	+	chr3.3:73250142-73250161	MS.gene75437:intron	35.0%
	AACTGTGATTCGTGTTTAAC+AGG	+	chr3.3:73251306-73251325	MS.gene75437:intron	35.0%
	AGGAACTTATATTCCACAGA+TGG	+	chr3.3:73250961-73250980	MS.gene75437:CDS	35.0%
	AGTCAGGTAAATGTTTGCAA+AGG	+	chr3.3:73249518-73249537	MS.gene75437:intron	35.0%
	AGTTCTTGCATTGCATTCTA+AGG	+	chr3.3:73250279-73250298	MS.gene75437:intron	35.0%
	ATATTAGTGACATAGAGCTC+AGG	+	chr3.3:73250405-73250424	MS.gene75437:CDS	35.0%
	ATCCATTCCCTTAATTGATG+AGG	+	chr3.3:73249475-73249494	MS.gene75437:CDS	35.0%
	ATGTGTTGTAACAACAATCC+CGG	-	chr3.3:73251233-73251252	None:intergenic	35.0%
	TAGTATGACATGTTGCGAAA+AGG	-	chr3.3:73251091-73251110	None:intergenic	35.0%
	TCTGTCAATGGTTCAATCAT+TGG	-	chr3.3:73250815-73250834	None:intergenic	35.0%
	TTAATGTGAGAAAGAATGGG+AGG	+	chr3.3:73250673-73250692	MS.gene75437:intron	35.0%
	TTCCTTTCTCTAATACCTTG+AGG	+	chr3.3:73250113-73250132	MS.gene75437:intron	35.0%
	TTCGATAGATTTCAGCATAG+TGG	-	chr3.3:73250454-73250473	None:intergenic	35.0%
!	CATACTTGTTAGATGTTCCT+AGG	-	chr3.3:73249644-73249663	None:intergenic	35.0%
!	CCCTTCTGAAAAAAATAGCT+TGG	+	chr3.3:73251264-73251283	MS.gene75437:intron	35.0%
!	CTTGAAGTTTGATAGTAGTC+AGG	+	chr3.3:73249502-73249521	MS.gene75437:CDS	35.0%
!!!	GCCAAGCTATTTTTTTCAGA+AGG	-	chr3.3:73251268-73251287	None:intergenic	35.0%
	AAGTCCGCCTCATCAATTAA+GGG	-	chr3.3:73249485-73249504	None:intergenic	40.0%
	AATCGTTGTTGCTCTGTCAA+TGG	-	chr3.3:73250827-73250846	None:intergenic	40.0%
	AGAAAGCTAGGTACAATACC+TGG	-	chr3.3:73251030-73251049	None:intergenic	40.0%
	AGAATATTTCCAACGCCTGA+GGG	+	chr3.3:73251414-73251433	MS.gene75437:CDS	40.0%
	AGGAAAAAGAAAGACGATGC+CGG	-	chr3.3:73250098-73250117	None:intergenic	40.0%
	ATGTCCATACTCCATCTCAA+AGG	-	chr3.3:73250330-73250349	None:intergenic	40.0%
	ATTGACAGAGCAACAACGAT+TGG	+	chr3.3:73250826-73250845	MS.gene75437:CDS	40.0%
	CAGATTAATATGTGGGGAGA+AGG	+	chr3.3:73249425-73249444	MS.gene75437:CDS	40.0%
	CATGATTTGATCACGGAGTT+CGG	-	chr3.3:73251168-73251187	None:intergenic	40.0%
	CATTCCCTTAATTGATGAGG+CGG	+	chr3.3:73249478-73249497	MS.gene75437:CDS	40.0%
	CATTTCTGACATTGCCTTAC+AGG	+	chr3.3:73249935-73249954	MS.gene75437:intron	40.0%
	CGATTGGATATCGATAACCT+TGG	+	chr3.3:73250842-73250861	MS.gene75437:CDS	40.0%
	CTTCTCCCCACATATTAATC+TGG	-	chr3.3:73249427-73249446	None:intergenic	40.0%
	CTTGTTGACATGATTGTCCA+AGG	-	chr3.3:73250862-73250881	None:intergenic	40.0%
	GGAGAAGGCTTCAAAAGTAA+TGG	+	chr3.3:73249440-73249459	MS.gene75437:CDS	40.0%
	TCTCGCCTTCTATCATTCTA+TGG	-	chr3.3:73250634-73250653	None:intergenic	40.0%
	TGAGATGGAGTATGGACATT+GGG	+	chr3.3:73250331-73250350	MS.gene75437:CDS	40.0%
	TTCTCATTTCCGAGATTTGC+CGG	-	chr3.3:73250370-73250389	None:intergenic	40.0%
	TTGAGATGGAGTATGGACAT+TGG	+	chr3.3:73250330-73250349	MS.gene75437:CDS	40.0%
	TTGAGGCAACAAAAACTGCA+GGG	+	chr3.3:73250130-73250149	MS.gene75437:intron	40.0%
	TTTAACAGGCTGACCATCTT+CGG	+	chr3.3:73251320-73251339	MS.gene75437:intron	40.0%
	TTTCTCCATGCCTTGTGAAA+GGG	-	chr3.3:73250894-73250913	None:intergenic	40.0%
!	AGATTTTTCTTGTGGATCGG+TGG	+	chr3.3:73250542-73250561	MS.gene75437:CDS	40.0%
!	AGTGATAAATGGAAAGCACG+TGG	-	chr3.3:73251122-73251141	None:intergenic	40.0%
!	CGGCTGAAAGATTTTTCTTG+TGG	+	chr3.3:73250534-73250553	MS.gene75437:CDS	40.0%
!	TCGTTTGAAGTTAGTGCAGT+TGG	+	chr3.3:73249983-73250002	MS.gene75437:CDS	40.0%
!	TGCCTCAAGGTATTAGAGAA+AGG	-	chr3.3:73250118-73250137	None:intergenic	40.0%
!!	ATTGGGTTGATGAGCAAAAC+CGG	+	chr3.3:73250348-73250367	MS.gene75437:CDS	40.0%
	ACAAACCAACCTGGATTCAC+AGG	-	chr3.3:73250205-73250224	None:intergenic	45.0%
	AGCATCTTCACAAACCAACC+TGG	-	chr3.3:73250214-73250233	None:intergenic	45.0%
	AGCTCGATGTTTGCTTGCTT+TGG	+	chr3.3:73251390-73251409	MS.gene75437:CDS	45.0%
	AGGGAATGTATATGGGTGGT+GGG	+	chr3.3:73250149-73250168	MS.gene75437:intron	45.0%
	ATACACACTCATCCTTCTCG+AGG	-	chr3.3:73249393-73249412	None:intergenic	45.0%
	ATCACCTTGAGAAGCTCAGA+AGG	-	chr3.3:73250575-73250594	None:intergenic	45.0%
	CAAGTCCGCCTCATCAATTA+AGG	-	chr3.3:73249486-73249505	None:intergenic	45.0%
	CGCCTCATCAATTAAGGGAA+TGG	-	chr3.3:73249480-73249499	None:intergenic	45.0%
	CTCAAAGGCTGCAATTCCTA+CGG	-	chr3.3:73250315-73250334	None:intergenic	45.0%
	CTTGAGGCAACAAAAACTGC+AGG	+	chr3.3:73250129-73250148	MS.gene75437:intron	45.0%
	GAGAATATTTCCAACGCCTG+AGG	+	chr3.3:73251413-73251432	MS.gene75437:CDS	45.0%
	GATGCTTCTCATGGTATCCT+AGG	+	chr3.3:73249624-73249643	MS.gene75437:CDS	45.0%
	GCAGCTGGACAATTCATTGA+AGG	+	chr3.3:73250941-73250960	MS.gene75437:CDS	45.0%
	GCTCGATGTTTGCTTGCTTT+GGG	+	chr3.3:73251391-73251410	MS.gene75437:CDS	45.0%
	GCTGCAATTCCTACGGATAA+GGG	-	chr3.3:73250308-73250327	None:intergenic	45.0%
	GTTTCTCCATGCCTTGTGAA+AGG	-	chr3.3:73250895-73250914	None:intergenic	45.0%
	TAAGAGCCGTCTGCGAAAAA+AGG	+	chr3.3:73249842-73249861	MS.gene75437:CDS	45.0%
	TAGTCAGAGGATGCTTCTCA+TGG	+	chr3.3:73249615-73249634	MS.gene75437:intron	45.0%
	TCACCTTGAGAAGCTCAGAA+GGG	-	chr3.3:73250574-73250593	None:intergenic	45.0%
	TGAGCAAAACCGGCAAATCT+CGG	+	chr3.3:73250358-73250377	MS.gene75437:CDS	45.0%
	TTTATGTGATGTCCGGCATG+TGG	+	chr3.3:73250504-73250523	MS.gene75437:CDS	45.0%
!	AGGAATTGCAGCCTTTGAGA+TGG	+	chr3.3:73250316-73250335	MS.gene75437:intron	45.0%
!	CTGCAGTTTTTGTTGCCTCA+AGG	-	chr3.3:73250131-73250150	None:intergenic	45.0%
!	TCTTGTGAGCTTTGTGAACC+AGG	+	chr3.3:73251009-73251028	MS.gene75437:CDS	45.0%
!	TGTTCGCGACATTTGTTGCA+GGG	-	chr3.3:73251353-73251372	None:intergenic	45.0%
!!	AATGTATATGGGTGGTGGGT+TGG	+	chr3.3:73250153-73250172	MS.gene75437:CDS	45.0%
	AACGTGTTAGACAGCAGGTG+TGG	+	chr3.3:73250018-73250037	MS.gene75437:intron	50.0%
	ACGTGTTAGACAGCAGGTGT+GGG	+	chr3.3:73250019-73250038	MS.gene75437:intron	50.0%
	AGATGCCCTTTCACAAGGCA+TGG	+	chr3.3:73250886-73250905	MS.gene75437:CDS	50.0%
	ATAGTGAGCTCAAAGCCCTC+AGG	-	chr3.3:73251432-73251451	None:intergenic	50.0%
	CACAAGGCATGGAGAAACTG+CGG	+	chr3.3:73250897-73250916	MS.gene75437:CDS	50.0%
	CAGGGAATGTATATGGGTGG+TGG	+	chr3.3:73250148-73250167	MS.gene75437:intron	50.0%
	CTAAGGACACCCTTATCCGT+AGG	+	chr3.3:73250296-73250315	MS.gene75437:intron	50.0%
	CTGCAGGGAATGTATATGGG+TGG	+	chr3.3:73250145-73250164	MS.gene75437:intron	50.0%
	CTGCTGCACATAAGCCTGTA+AGG	-	chr3.3:73249952-73249971	None:intergenic	50.0%
	GAGGAAACAAACTGCGCAGA+CGG	-	chr3.3:73249374-73249393	None:intergenic	50.0%
	GCAAACATCGAGCTGACTGA+CGG	-	chr3.3:73251384-73251403	None:intergenic	50.0%
	GCAGAAGATGCCCTTTCACA+AGG	+	chr3.3:73250881-73250900	MS.gene75437:CDS	50.0%
	GGCTGCAATTCCTACGGATA+AGG	-	chr3.3:73250309-73250328	None:intergenic	50.0%
	GTCCGGCATGTGGAAAACAA+CGG	+	chr3.3:73250514-73250533	MS.gene75437:CDS	50.0%
	TCCACAGATGGCTACTGCAA+TGG	+	chr3.3:73250973-73250992	MS.gene75437:CDS	50.0%
	TCCATTGCAGTAGCCATCTG+TGG	-	chr3.3:73250977-73250996	None:intergenic	50.0%
	TGACATAGAGCTCAGGATGC+TGG	+	chr3.3:73250412-73250431	MS.gene75437:CDS	50.0%
	TTTGCTGGACCTGTGAATCC+AGG	+	chr3.3:73250193-73250212	MS.gene75437:CDS	50.0%
!	CGCAGTTTGTTTCCTCGAGA+AGG	+	chr3.3:73249378-73249397	MS.gene75437:CDS	50.0%
!	GTGTTCGCGACATTTGTTGC+AGG	-	chr3.3:73251354-73251373	None:intergenic	50.0%
!!	AGCCGTTGTTTTCCACATGC+CGG	-	chr3.3:73250519-73250538	None:intergenic	50.0%
!!	GCAGCCTTTGAGATGGAGTA+TGG	+	chr3.3:73250323-73250342	MS.gene75437:CDS	50.0%
!!	TGAGGGCTTTGAGCTCACTA+TGG	+	chr3.3:73251431-73251450	MS.gene75437:CDS	50.0%
	CGTGTTAGACAGCAGGTGTG+GGG	+	chr3.3:73250020-73250039	MS.gene75437:intron	55.0%
	CTGGACCTGTGAATCCAGGT+TGG	+	chr3.3:73250197-73250216	MS.gene75437:intron	55.0%
	GCTCGAACGTGTTAGACAGC+AGG	+	chr3.3:73250013-73250032	MS.gene75437:CDS	55.0%
	GGCTCTTACGAGCAGCTTCT+CGG	-	chr3.3:73249830-73249849	None:intergenic	55.0%
	TCGCCCTTCTGAGCTTCTCA+AGG	+	chr3.3:73250568-73250587	MS.gene75437:CDS	55.0%
!	GAGCTCAGGATGCTGGTTGA+TGG	+	chr3.3:73250419-73250438	MS.gene75437:CDS	55.0%
	ACAGGCTGACCATCTTCGGC+AGG	+	chr3.3:73251324-73251343	MS.gene75437:intron	60.0%
	AGCTCAAAGCCCTCAGGCGT+TGG	-	chr3.3:73251426-73251445	None:intergenic	60.0%
	GCAGGGTTTCCTGCCGAAGA+TGG	-	chr3.3:73251336-73251355	None:intergenic	60.0%
!	CTCGCTGATAGCGTAGCAGC+TGG	+	chr3.3:73250926-73250945	MS.gene75437:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr3.3	gene	73249362	73251480	73249362	ID=MS.gene75437
chr3.3	mRNA	73249362	73251480	73249362	ID=MS.gene75437.t1;Parent=MS.gene75437
chr3.3	exon	73249362	73249523	73249362	ID=MS.gene75437.t1.exon1;Parent=MS.gene75437.t1
chr3.3	CDS	73249362	73249523	73249362	ID=cds.MS.gene75437.t1;Parent=MS.gene75437.t1
chr3.3	exon	73249618	73249692	73249618	ID=MS.gene75437.t1.exon2;Parent=MS.gene75437.t1
chr3.3	CDS	73249618	73249692	73249618	ID=cds.MS.gene75437.t1;Parent=MS.gene75437.t1
chr3.3	exon	73249804	73249863	73249804	ID=MS.gene75437.t1.exon3;Parent=MS.gene75437.t1
chr3.3	CDS	73249804	73249863	73249804	ID=cds.MS.gene75437.t1;Parent=MS.gene75437.t1
chr3.3	exon	73249957	73250034	73249957	ID=MS.gene75437.t1.exon4;Parent=MS.gene75437.t1
chr3.3	CDS	73249957	73250034	73249957	ID=cds.MS.gene75437.t1;Parent=MS.gene75437.t1
chr3.3	exon	73250151	73250214	73250151	ID=MS.gene75437.t1.exon5;Parent=MS.gene75437.t1
chr3.3	CDS	73250151	73250214	73250151	ID=cds.MS.gene75437.t1;Parent=MS.gene75437.t1
chr3.3	exon	73250318	73250589	73250318	ID=MS.gene75437.t1.exon6;Parent=MS.gene75437.t1
chr3.3	CDS	73250318	73250589	73250318	ID=cds.MS.gene75437.t1;Parent=MS.gene75437.t1
chr3.3	exon	73250803	73251030	73250803	ID=MS.gene75437.t1.exon7;Parent=MS.gene75437.t1
chr3.3	CDS	73250803	73251030	73250803	ID=cds.MS.gene75437.t1;Parent=MS.gene75437.t1
chr3.3	exon	73251328	73251480	73251328	ID=MS.gene75437.t1.exon8;Parent=MS.gene75437.t1
chr3.3	CDS	73251328	73251480	73251328	ID=cds.MS.gene75437.t1;Parent=MS.gene75437.t1

Gene Sequence

>MS.gene75437

ATGAATTCGCCGTCTGCGCAGTTTGTTTCCTCGAGAAGGATGAGTGTGTATGATCCTATTCACCAGATTAATATGTGGGGAGAAGGCTTCAAAAGTAATGGAAATTTAAGTGCATCCATTCCCTTAATTGATGAGGCGGACTTGAAGTTTGATAGTAGTCAGGTAAATGTTTGCAAAGGTTGATTTGTTTCATTGGCAAATGAGAATGCATATTCTGCTTATTAACCAAATTGGATTCATGTTTTATAATGCTTAGTCAGAGGATGCTTCTCATGGTATCCTAGGAACATCTAACAAGTATGAGCAAGAAGCTAATAGACCTATTGATAAGGTTAGAACATGAAGAATTTGTATTCGGTGCACATTAAGTCATTAATTGATACCATGCTTTCAAATTTTGGATGTTGTACATTAAGTCATTCTGATATGATTAAATATGCAGATACAAAGGCGTCTTGCACAAAACCGAGAAGCTGCTCGTAAGAGCCGTCTGCGAAAAAAGGTTTTAATGTTGTTTACAAATTGATGAATATGTCAGACGAGTAATTATTAGTGTCAATGTACTGATCAAGTCATTTCTGACATTGCCTTACAGGCTTATGTGCAGCAGCTAGAATCAAGTCGTTTGAAGTTAGTGCAGTTGGAGCAAGAGCTCGAACGTGTTAGACAGCAGGTGTGGGGAAGATGAGTTATTATTTTACTAGTATTTTCTCTTTTCTATCACTTTATGTCACCGGCATCGTCTTTCTTTTTCCTTTCTCTAATACCTTGAGGCAACAAAAACTGCAGGGAATGTATATGGGTGGTGGGTTGGATTCTAATAATATGTGTTTTGCTGGACCTGTGAATCCAGGTTGGTTTGTGAAGATGCTACTACTGCTATATATTTATTTGTATTGCATTTAATTTTTCAAATTAGTTCTTGCATTGCATTCTAAGGACACCCTTATCCGTAGGAATTGCAGCCTTTGAGATGGAGTATGGACATTGGGTTGATGAGCAAAACCGGCAAATCTCGGAAATGAGAAATGCTTTAAACTCGCATATTAGTGACATAGAGCTCAGGATGCTGGTTGATGGTATGATGAACCACTATGCTGAAATCTATCGAATGAAATCTGCAGCTGCAAAAACAGATGTTTTTTATGTGATGTCCGGCATGTGGAAAACAACGGCTGAAAGATTTTTCTTGTGGATCGGTGGATTTCGCCCTTCTGAGCTTCTCAAGGTGATTGTTCATATTTAAAGAATATAAGTTGAAGATGTTATCCATAGAATGATAGAAGGCGAGATCAAAATTTCATCATTGTCTTAATGTGAGAAAGAATGGGAGGAGTTTAGAACTGCATTCATTTATTACAACTTTAATTCCATATTCAATTATGGCATGACAAATTTATAATGTAGTATGGTGGAAGTCTATAACTTGATTTAATTGCAGATTCTTGGTCCAATGATTGAACCATTGACAGAGCAACAACGATTGGATATCGATAACCTTGGACAATCATGTCAACAAGCAGAAGATGCCCTTTCACAAGGCATGGAGAAACTGCGGCAAACACTCGCTGATAGCGTAGCAGCTGGACAATTCATTGAAGGAACTTATATTCCACAGATGGCTACTGCAATGGAGAAGTTAGAAGCTCTTGTGAGCTTTGTGAACCAGGTATTGTACCTAGCTTTCTTGATAACCATTACTTTTCAATTTAATAAAACTTAATTTCCTTTTCGCAACATGTCATACTAATAAAAGACCACGTGCTTTCCATTTATCACTAACTTATTATCAAGCAAAATTGTCCGAACTCCGTGATCAAATCATGTATGTTTTATGTCTGCGTTTTTTGTATATGTTTATTTTATAACCGGGATTGTTGTTACAACACATTATTAATTGACCCCTTCTGAAAAAAATAGCTTGGCCATTAGAATCACATATTTAACTGTGATTCGTGTTTAACAGGCTGACCATCTTCGGCAGGAAACCCTGCAACAAATGTCGCGAACACTTACAATCCGTCAGTCAGCTCGATGTTTGCTTGCTTTGGGAGAATATTTCCAACGCCTGAGGGCTTTGAGCTCACTATGGTCTAATCGACCCCGAGAACCTGCTTAG

Protein sequence

>MS.gene75437.t1

MNSPSAQFVSSRRMSVYDPIHQINMWGEGFKSNGNLSASIPLIDEADLKFDSSQSEDASHGILGTSNKYEQEANRPIDKIQRRLAQNREAARKSRLRKKAYVQQLESSRLKLVQLEQELERVRQQGMYMGGGLDSNNMCFAGPVNPGIAAFEMEYGHWVDEQNRQISEMRNALNSHISDIELRMLVDGMMNHYAEIYRMKSAAAKTDVFYVMSGMWKTTAERFFLWIGGFRPSELLKILGPMIEPLTEQQRLDIDNLGQSCQQAEDALSQGMEKLRQTLADSVAAGQFIEGTYIPQMATAMEKLEALVSFVNQADHLRQETLQQMSRTLTIRQSARCLLALGEYFQRLRALSSLWSNRPREPA