Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene76967.t1 | RHN44125.1 | 96.7 | 330 | 11 | 0 | 1 | 330 | 169 | 498 | 1.30E-157 | 565.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene76967.t1 | Q9FLD5 | 70.0 | 297 | 79 | 3 | 1 | 292 | 173 | 464 | 4.8e-105 | 382.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene76967.t1 | A0A396GZ58 | 96.7 | 330 | 11 | 0 | 1 | 330 | 169 | 498 | 9.2e-158 | 565.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050020 | MS.gene76967 | 0.825457 | 4.64E-54 | -1.69E-46 |
MS.gene050807 | MS.gene76967 | 0.831534 | 1.58E-55 | -1.69E-46 |
MS.gene050808 | MS.gene76967 | 0.809833 | 1.56E-50 | -1.69E-46 |
MS.gene05157 | MS.gene76967 | 0.810159 | 1.32E-50 | -1.69E-46 |
MS.gene051719 | MS.gene76967 | 0.831763 | 1.39E-55 | -1.69E-46 |
MS.gene051720 | MS.gene76967 | 0.834374 | 3.11E-56 | -1.69E-46 |
MS.gene052516 | MS.gene76967 | 0.801225 | 9.95E-49 | -1.69E-46 |
MS.gene052665 | MS.gene76967 | 0.8202 | 7.78E-53 | -1.69E-46 |
MS.gene053144 | MS.gene76967 | 0.808069 | 3.71E-50 | -1.69E-46 |
MS.gene053581 | MS.gene76967 | 0.826456 | 2.69E-54 | -1.69E-46 |
MS.gene054584 | MS.gene76967 | 0.802074 | 6.67E-49 | -1.69E-46 |
MS.gene054791 | MS.gene76967 | 0.809702 | 1.66E-50 | -1.69E-46 |
MS.gene055465 | MS.gene76967 | 0.805257 | 1.46E-49 | -1.69E-46 |
MS.gene055890 | MS.gene76967 | 0.807492 | 4.92E-50 | -1.69E-46 |
MS.gene055891 | MS.gene76967 | 0.814346 | 1.61E-51 | -1.69E-46 |
MS.gene060519 | MS.gene76967 | 0.82648 | 2.65E-54 | -1.69E-46 |
MS.gene060587 | MS.gene76967 | 0.807598 | 4.67E-50 | -1.69E-46 |
MS.gene061176 | MS.gene76967 | 0.806086 | 9.76E-50 | -1.69E-46 |
MS.gene061177 | MS.gene76967 | 0.805596 | 1.24E-49 | -1.69E-46 |
MS.gene061178 | MS.gene76967 | 0.805914 | 1.06E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene76967.t1 | MTR_7g008040 | 98.754 | 321 | 4 | 0 | 1 | 321 | 169 | 489 | 0.0 | 654 |
MS.gene76967.t1 | MTR_4g107370 | 63.253 | 332 | 112 | 2 | 1 | 322 | 174 | 505 | 3.64e-147 | 425 |
MS.gene76967.t1 | MTR_6g009540 | 71.331 | 293 | 77 | 3 | 1 | 292 | 173 | 459 | 2.83e-146 | 422 |
MS.gene76967.t1 | MTR_6g009520 | 71.233 | 292 | 77 | 3 | 2 | 292 | 176 | 461 | 3.63e-144 | 417 |
MS.gene76967.t1 | MTR_6g042290 | 68.259 | 293 | 74 | 4 | 1 | 292 | 177 | 451 | 1.65e-139 | 404 |
MS.gene76967.t1 | MTR_1g022250 | 64.780 | 318 | 89 | 6 | 1 | 317 | 172 | 467 | 1.95e-139 | 403 |
MS.gene76967.t1 | MTR_6g009553 | 67.219 | 302 | 85 | 4 | 1 | 292 | 151 | 448 | 1.12e-137 | 399 |
MS.gene76967.t1 | MTR_6g009770 | 67.333 | 300 | 86 | 3 | 1 | 292 | 152 | 447 | 1.65e-135 | 394 |
MS.gene76967.t1 | MTR_2g030420 | 63.430 | 309 | 95 | 4 | 1 | 309 | 175 | 465 | 2.55e-135 | 392 |
MS.gene76967.t1 | MTR_6g009720 | 66.890 | 299 | 87 | 3 | 1 | 291 | 174 | 468 | 3.67e-134 | 392 |
MS.gene76967.t1 | MTR_6g009510 | 58.333 | 336 | 87 | 5 | 1 | 321 | 152 | 449 | 8.21e-126 | 368 |
MS.gene76967.t1 | MTR_1g022245 | 61.017 | 295 | 110 | 2 | 1 | 291 | 167 | 460 | 3.37e-125 | 368 |
MS.gene76967.t1 | MTR_6g009660 | 62.545 | 275 | 84 | 4 | 21 | 292 | 153 | 411 | 7.83e-109 | 325 |
MS.gene76967.t1 | MTR_4g128260 | 48.665 | 337 | 134 | 9 | 2 | 327 | 169 | 477 | 1.59e-97 | 298 |
MS.gene76967.t1 | MTR_2g061820 | 48.475 | 295 | 141 | 4 | 3 | 296 | 164 | 448 | 7.14e-97 | 296 |
MS.gene76967.t1 | MTR_5g020980 | 49.662 | 296 | 116 | 6 | 4 | 297 | 187 | 451 | 4.78e-96 | 293 |
MS.gene76967.t1 | MTR_8g076920 | 45.161 | 310 | 139 | 3 | 18 | 323 | 206 | 488 | 9.94e-89 | 275 |
MS.gene76967.t1 | MTR_2g076710 | 48.611 | 288 | 115 | 7 | 18 | 302 | 192 | 449 | 3.02e-88 | 272 |
MS.gene76967.t1 | MTR_2g076690 | 49.135 | 289 | 116 | 7 | 23 | 307 | 191 | 452 | 1.21e-87 | 270 |
MS.gene76967.t1 | MTR_2g076920 | 47.987 | 298 | 121 | 6 | 10 | 304 | 176 | 442 | 7.36e-87 | 269 |
MS.gene76967.t1 | MTR_2g076970 | 46.980 | 298 | 121 | 6 | 25 | 314 | 186 | 454 | 1.24e-86 | 268 |
MS.gene76967.t1 | MTR_2g076990 | 46.780 | 295 | 126 | 6 | 25 | 313 | 129 | 398 | 2.25e-83 | 259 |
MS.gene76967.t1 | MTR_2g076840 | 50.190 | 263 | 105 | 3 | 30 | 292 | 467 | 703 | 1.87e-82 | 264 |
MS.gene76967.t1 | MTR_2g076840 | 44.884 | 303 | 131 | 6 | 7 | 309 | 177 | 443 | 1.75e-81 | 262 |
MS.gene76967.t1 | MTR_2g076900 | 44.040 | 302 | 132 | 5 | 24 | 323 | 190 | 456 | 1.09e-81 | 255 |
MS.gene76967.t1 | MTR_3g103150 | 44.128 | 281 | 131 | 4 | 22 | 300 | 28 | 284 | 2.46e-80 | 246 |
MS.gene76967.t1 | MTR_5g020990 | 43.599 | 289 | 146 | 3 | 18 | 304 | 209 | 482 | 5.48e-79 | 249 |
MS.gene76967.t1 | MTR_7g117950 | 38.144 | 291 | 133 | 7 | 3 | 292 | 161 | 405 | 5.72e-61 | 202 |
MS.gene76967.t1 | MTR_3g092060 | 34.014 | 294 | 148 | 5 | 2 | 292 | 164 | 414 | 5.07e-56 | 189 |
MS.gene76967.t1 | MTR_1g011680 | 64.885 | 131 | 43 | 1 | 164 | 291 | 3 | 133 | 4.23e-52 | 170 |
MS.gene76967.t1 | MTR_5g021020 | 36.299 | 281 | 135 | 7 | 22 | 300 | 175 | 413 | 8.69e-47 | 163 |
MS.gene76967.t1 | MTR_8g027200 | 31.481 | 324 | 140 | 9 | 24 | 326 | 179 | 441 | 2.05e-45 | 160 |
MS.gene76967.t1 | MTR_5g021000 | 50.926 | 108 | 48 | 2 | 187 | 292 | 1 | 105 | 5.01e-31 | 115 |
MS.gene76967.t1 | MTR_5g020720 | 36.364 | 187 | 92 | 5 | 94 | 278 | 25 | 186 | 3.70e-28 | 108 |
MS.gene76967.t1 | MTR_1g113750 | 67.143 | 70 | 23 | 0 | 220 | 289 | 16 | 85 | 1.04e-24 | 97.4 |
MS.gene76967.t1 | MTR_5g021010 | 43.243 | 111 | 51 | 4 | 192 | 293 | 15 | 122 | 1.73e-17 | 77.8 |
MS.gene76967.t1 | MTR_2g076820 | 55.769 | 52 | 23 | 0 | 220 | 271 | 1 | 52 | 4.77e-11 | 58.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene76967.t1 | AT5G40010 | 69.966 | 293 | 78 | 4 | 1 | 288 | 173 | 460 | 2.97e-140 | 407 |
MS.gene76967.t1 | AT3G28610 | 61.514 | 317 | 109 | 3 | 2 | 317 | 168 | 472 | 7.91e-135 | 392 |
MS.gene76967.t1 | AT3G28580 | 67.820 | 289 | 85 | 4 | 2 | 288 | 173 | 455 | 1.43e-134 | 392 |
MS.gene76967.t1 | AT3G28600 | 62.418 | 306 | 101 | 2 | 2 | 306 | 130 | 422 | 4.65e-134 | 389 |
MS.gene76967.t1 | AT3G28600 | 62.418 | 306 | 101 | 2 | 2 | 306 | 169 | 461 | 2.57e-133 | 388 |
MS.gene76967.t1 | AT3G28510 | 63.051 | 295 | 103 | 1 | 1 | 295 | 173 | 461 | 2.10e-130 | 382 |
MS.gene76967.t1 | AT3G28540 | 62.069 | 290 | 107 | 1 | 1 | 290 | 169 | 455 | 4.93e-127 | 373 |
MS.gene76967.t1 | AT3G28540 | 62.069 | 290 | 107 | 1 | 1 | 290 | 169 | 455 | 6.95e-127 | 373 |
MS.gene76967.t1 | AT5G40000 | 59.807 | 311 | 104 | 6 | 1 | 308 | 172 | 464 | 7.93e-126 | 369 |
MS.gene76967.t1 | AT3G28520 | 59.450 | 291 | 111 | 2 | 1 | 291 | 158 | 441 | 3.45e-118 | 349 |
MS.gene76967.t1 | AT3G28580 | 61.938 | 289 | 80 | 5 | 2 | 288 | 173 | 433 | 8.86e-118 | 348 |
MS.gene76967.t1 | AT3G28570 | 57.756 | 303 | 103 | 3 | 2 | 303 | 167 | 445 | 3.63e-117 | 346 |
MS.gene76967.t1 | AT3G28570 | 57.756 | 303 | 103 | 3 | 2 | 303 | 174 | 452 | 5.86e-117 | 345 |
MS.gene76967.t1 | AT3G50930 | 49.660 | 294 | 126 | 4 | 7 | 300 | 236 | 507 | 1.04e-96 | 297 |
MS.gene76967.t1 | AT3G50940 | 49.632 | 272 | 110 | 3 | 24 | 295 | 200 | 444 | 1.32e-94 | 288 |
MS.gene76967.t1 | AT5G57480 | 47.557 | 307 | 135 | 6 | 2 | 294 | 169 | 463 | 2.35e-93 | 287 |
MS.gene76967.t1 | AT4G25835 | 48.495 | 299 | 138 | 7 | 3 | 297 | 170 | 456 | 8.33e-93 | 285 |
MS.gene76967.t1 | AT4G05380 | 46.667 | 300 | 141 | 3 | 7 | 304 | 177 | 459 | 2.36e-91 | 280 |
MS.gene76967.t1 | AT4G30250 | 47.811 | 297 | 139 | 5 | 8 | 300 | 183 | 467 | 7.48e-89 | 276 |
MS.gene76967.t1 | AT4G30250 | 47.811 | 297 | 139 | 5 | 8 | 300 | 185 | 469 | 8.78e-89 | 275 |
MS.gene76967.t1 | AT2G18193 | 43.849 | 317 | 146 | 5 | 5 | 319 | 180 | 466 | 9.81e-89 | 275 |
MS.gene76967.t1 | AT5G17760 | 45.907 | 281 | 124 | 3 | 24 | 300 | 206 | 462 | 7.11e-88 | 273 |
MS.gene76967.t1 | AT5G17740 | 43.537 | 294 | 140 | 4 | 18 | 306 | 192 | 464 | 3.25e-85 | 266 |
MS.gene76967.t1 | AT5G17730 | 43.571 | 280 | 129 | 3 | 24 | 300 | 198 | 451 | 5.11e-85 | 264 |
MS.gene76967.t1 | AT1G43910 | 49.470 | 283 | 128 | 5 | 18 | 298 | 184 | 453 | 1.41e-83 | 261 |
MS.gene76967.t1 | AT2G18190 | 43.902 | 287 | 135 | 4 | 19 | 303 | 192 | 454 | 9.24e-82 | 256 |
MS.gene76967.t1 | AT5G17750 | 45.417 | 240 | 105 | 2 | 24 | 258 | 173 | 391 | 2.53e-74 | 234 |
MS.gene76967.t1 | AT2G46620 | 39.781 | 274 | 125 | 5 | 21 | 292 | 181 | 416 | 1.33e-64 | 212 |
MS.gene76967.t1 | AT5G17760 | 50.388 | 129 | 64 | 0 | 24 | 152 | 206 | 334 | 8.42e-45 | 156 |
MS.gene76967.t1 | AT3G29800 | 31.769 | 277 | 139 | 6 | 18 | 289 | 146 | 377 | 2.83e-41 | 149 |
MS.gene76967.t1 | AT4G05340 | 50.000 | 92 | 39 | 1 | 160 | 244 | 2 | 93 | 1.08e-20 | 85.5 |
Find 45 sgRNAs with CRISPR-Local
Find 60 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AAACGCGGTTATTTACTTTA+TGG | 0.206027 | 7.2:-89771349 | MS.gene76967:CDS |
AATAGTAAGGTAACTTTATC+TGG | 0.207637 | 7.2:-89771037 | MS.gene76967:CDS |
GGTTCTTGTTAAGAATTATT+TGG | 0.226983 | 7.2:-89770855 | MS.gene76967:CDS |
CATGATTTGTTTGATGAAAT+TGG | 0.246773 | 7.2:-89770821 | MS.gene76967:CDS |
AAGAAATTGCAATGAGAAAT+AGG | 0.272071 | 7.2:-89771570 | None:intergenic |
AACTTGATCCGGCTCTTATT+AGG | 0.290902 | 7.2:-89770934 | MS.gene76967:CDS |
GAAAACAATGTGACTCCATT+TGG | 0.322099 | 7.2:+89771492 | None:intergenic |
ATAGTAGATTTACCTGTTCC+TGG | 0.352380 | 7.2:+89771322 | None:intergenic |
GTGGAAGATGTGAAGGAAAA+TGG | 0.364356 | 7.2:-89770626 | MS.gene76967:CDS |
TCTTGAATTAACCGCGGTTA+AGG | 0.395319 | 7.2:-89771257 | MS.gene76967:CDS |
CTTTATGGTCCTCCAGGAAC+AGG | 0.413204 | 7.2:-89771334 | MS.gene76967:CDS |
TAGCCATACCAACCACTACT+TGG | 0.433604 | 7.2:+89771523 | None:intergenic |
TAAGGAAGAAGACTCATTCA+TGG | 0.461057 | 7.2:-89771113 | MS.gene76967:CDS |
GCAAGTGTCTCAAAAGTTGC+AGG | 0.465004 | 7.2:+89771463 | None:intergenic |
TTTGAAGTTTAGAAATGGTA+AGG | 0.467899 | 7.2:-89771401 | MS.gene76967:CDS |
TGATGAAATTGGTGATTTGT+TGG | 0.479236 | 7.2:-89770810 | MS.gene76967:CDS |
TATTTACTTTATGGTCCTCC+AGG | 0.495610 | 7.2:-89771340 | MS.gene76967:CDS |
AATCCAAGTAGTGGTTGGTA+TGG | 0.510050 | 7.2:-89771526 | MS.gene76967:CDS |
ATGGCTACAAACAATCCAAA+TGG | 0.513174 | 7.2:-89771507 | MS.gene76967:CDS |
AAATTCTCAGCAACATCAGC+AGG | 0.526229 | 7.2:+89770770 | None:intergenic |
AAATGGTTACATTGTGAGAG+TGG | 0.530013 | 7.2:-89770609 | MS.gene76967:CDS |
CAAATAATCCAAGTAGTGGT+TGG | 0.539028 | 7.2:-89771531 | MS.gene76967:CDS |
ATCTACTATGATAGCCGCTA+TGG | 0.541351 | 7.2:-89771308 | MS.gene76967:CDS |
ATCGGTAAGGCTTGGAAACG+CGG | 0.549524 | 7.2:-89771364 | MS.gene76967:CDS |
ACATCTTCATTCACAGACTT+AGG | 0.556783 | 7.2:+89770743 | None:intergenic |
CTTCCTGTCCTAATAAGAGC+CGG | 0.561724 | 7.2:+89770926 | None:intergenic |
GATCCGGCTCTTATTAGGAC+AGG | 0.564849 | 7.2:-89770929 | MS.gene76967:CDS |
TATACAAATAATCCAAGTAG+TGG | 0.565102 | 7.2:-89771535 | MS.gene76967:CDS |
TCTTATTAGGACAGGAAGGA+TGG | 0.580005 | 7.2:-89770921 | MS.gene76967:CDS |
GGTCCGCGTGTGGAGGAGAG+AGG | 0.586140 | 7.2:-89770988 | MS.gene76967:CDS |
ATTTGATTCAAGCACTTGAG+AGG | 0.587639 | 7.2:-89770703 | MS.gene76967:CDS |
GAAGACAAGGAAGATAGTGT+AGG | 0.600054 | 7.2:-89770653 | MS.gene76967:CDS |
TCAAGCACTTGAGAGGAAGA+AGG | 0.600486 | 7.2:-89770696 | MS.gene76967:CDS |
AGGAACTGTGGAAGATGTGA+AGG | 0.615776 | 7.2:-89770633 | MS.gene76967:CDS |
CGGCTCTTATTAGGACAGGA+AGG | 0.621448 | 7.2:-89770925 | MS.gene76967:CDS |
TTGCAATGAGAAATAGGCAA+AGG | 0.621519 | 7.2:-89771564 | None:intergenic |
GGAAGATAGTGTAGGAACTG+TGG | 0.624422 | 7.2:-89770645 | MS.gene76967:CDS |
GATGGAATTTGGTCCGCGTG+TGG | 0.633363 | 7.2:-89770998 | MS.gene76967:CDS |
CTCAGTATTATCCTTAACCG+CGG | 0.645496 | 7.2:+89771246 | None:intergenic |
GGAATTTGGTCCGCGTGTGG+AGG | 0.645589 | 7.2:-89770995 | MS.gene76967:CDS |
AGCACTTGAGAGGAAGAAGG+TGG | 0.649097 | 7.2:-89770693 | MS.gene76967:CDS |
AATCCTCTCTCCTCCACACG+CGG | 0.650999 | 7.2:+89770985 | None:intergenic |
GTTCATGAAATTCGCCATAG+CGG | 0.682175 | 7.2:+89771294 | None:intergenic |
GTAGATTTACCTGTTCCTGG+AGG | 0.701492 | 7.2:+89771325 | None:intergenic |
TTATGATCTTGAATTAACCG+CGG | 0.736452 | 7.2:-89771263 | MS.gene76967:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AACAAAAAGATTATTATCAT+AGG | - | chr7.2:89771058-89771077 | MS.gene76967:CDS | 15.0% |
!! | GAATAATAGTAAAAATAGTA+AGG | - | chr7.2:89771098-89771117 | MS.gene76967:CDS | 15.0% |
!! | TTATTATCATAGGAAAAAAG+AGG | - | chr7.2:89771068-89771087 | MS.gene76967:CDS | 20.0% |
!!! | CATTTTTATTAATCTTCCTT+TGG | + | chr7.2:89771008-89771027 | None:intergenic | 20.0% |
!!! | GGTTTATTGAATTTTATTGA+TGG | - | chr7.2:89771132-89771151 | MS.gene76967:CDS | 20.0% |
!!! | TGAATTTTATTGATGGAATT+TGG | - | chr7.2:89771139-89771158 | MS.gene76967:CDS | 20.0% |
! | AAGGACTATTATGCAAAAAT+CGG | - | chr7.2:89770766-89770785 | MS.gene76967:CDS | 25.0% |
! | AATAGTAAGGTAACTTTATC+TGG | - | chr7.2:89771111-89771130 | MS.gene76967:CDS | 25.0% |
! | GGTTCTTGTTAAGAATTATT+TGG | - | chr7.2:89771293-89771312 | MS.gene76967:CDS | 25.0% |
! | TATACAAATAATCCAAGTAG+TGG | - | chr7.2:89770613-89770632 | MS.gene76967:CDS | 25.0% |
!! | TTTGAAGTTTAGAAATGGTA+AGG | - | chr7.2:89770747-89770766 | MS.gene76967:CDS | 25.0% |
!!! | CATGATTTGTTTGATGAAAT+TGG | - | chr7.2:89771327-89771346 | MS.gene76967:CDS | 25.0% |
!!! | GATCTTTTGAAGTTTAGAAA+TGG | - | chr7.2:89770742-89770761 | MS.gene76967:CDS | 25.0% |
!!! | TTGTTGTTTTGAAGCTTTTA+AGG | - | chr7.2:89771272-89771291 | MS.gene76967:CDS | 25.0% |
AAACGCGGTTATTTACTTTA+TGG | - | chr7.2:89770799-89770818 | MS.gene76967:CDS | 30.0% | |
ACAAAAAGTAGAAGAAGACA+AGG | - | chr7.2:89771482-89771501 | MS.gene76967:CDS | 30.0% | |
CTATTATGCAAAAATCGGTA+AGG | - | chr7.2:89770771-89770790 | MS.gene76967:CDS | 30.0% | |
TTATGATCTTGAATTAACCG+CGG | - | chr7.2:89770885-89770904 | MS.gene76967:CDS | 30.0% | |
! | AATTTTCACGACGAATTTTG+TGG | - | chr7.2:89771188-89771207 | MS.gene76967:CDS | 30.0% |
! | TGATGAAATTGGTGATTTGT+TGG | - | chr7.2:89771338-89771357 | MS.gene76967:CDS | 30.0% |
AAATGGTTACATTGTGAGAG+TGG | - | chr7.2:89771539-89771558 | MS.gene76967:CDS | 35.0% | |
ACATCTTCATTCACAGACTT+AGG | + | chr7.2:89771408-89771427 | None:intergenic | 35.0% | |
ATAGTAGATTTACCTGTTCC+TGG | + | chr7.2:89770829-89770848 | None:intergenic | 35.0% | |
ATGGCTACAAACAATCCAAA+TGG | - | chr7.2:89770641-89770660 | MS.gene76967:CDS | 35.0% | |
ATTTGATTCAAGCACTTGAG+AGG | - | chr7.2:89771445-89771464 | MS.gene76967:CDS | 35.0% | |
CAAATAATCCAAGTAGTGGT+TGG | - | chr7.2:89770617-89770636 | MS.gene76967:CDS | 35.0% | |
GAAAACAATGTGACTCCATT+TGG | + | chr7.2:89770659-89770678 | None:intergenic | 35.0% | |
TAAGGAAGAAGACTCATTCA+TGG | - | chr7.2:89771035-89771054 | MS.gene76967:CDS | 35.0% | |
TATTTACTTTATGGTCCTCC+AGG | - | chr7.2:89770808-89770827 | MS.gene76967:CDS | 35.0% | |
! | CACTTGATTTTACTAGCCAA+AGG | - | chr7.2:89770989-89771008 | MS.gene76967:CDS | 35.0% |
! | TTTTGTGGAGAAACTTGATC+CGG | - | chr7.2:89771203-89771222 | MS.gene76967:CDS | 35.0% |
!!! | AACTTTTGAGACACTTGCAT+TGG | - | chr7.2:89770690-89770709 | MS.gene76967:CDS | 35.0% |
AAATTCTCAGCAACATCAGC+AGG | + | chr7.2:89771381-89771400 | None:intergenic | 40.0% | |
AACTTGATCCGGCTCTTATT+AGG | - | chr7.2:89771214-89771233 | MS.gene76967:CDS | 40.0% | |
ATCTACTATGATAGCCGCTA+TGG | - | chr7.2:89770840-89770859 | MS.gene76967:CDS | 40.0% | |
ATGCAAAAATCGGTAAGGCT+TGG | - | chr7.2:89770776-89770795 | MS.gene76967:CDS | 40.0% | |
CTCAGTATTATCCTTAACCG+CGG | + | chr7.2:89770905-89770924 | None:intergenic | 40.0% | |
GAAGACAAGGAAGATAGTGT+AGG | - | chr7.2:89771495-89771514 | MS.gene76967:CDS | 40.0% | |
GTGGAAGATGTGAAGGAAAA+TGG | - | chr7.2:89771522-89771541 | MS.gene76967:CDS | 40.0% | |
GTTCATGAAATTCGCCATAG+CGG | + | chr7.2:89770857-89770876 | None:intergenic | 40.0% | |
TCTTATTAGGACAGGAAGGA+TGG | - | chr7.2:89771227-89771246 | MS.gene76967:CDS | 40.0% | |
TCTTGAATTAACCGCGGTTA+AGG | - | chr7.2:89770891-89770910 | MS.gene76967:CDS | 40.0% | |
! | AATCCAAGTAGTGGTTGGTA+TGG | - | chr7.2:89770622-89770641 | MS.gene76967:CDS | 40.0% |
AGGAACTGTGGAAGATGTGA+AGG | - | chr7.2:89771515-89771534 | MS.gene76967:CDS | 45.0% | |
CTTCCTGTCCTAATAAGAGC+CGG | + | chr7.2:89771225-89771244 | None:intergenic | 45.0% | |
GCAAGTGTCTCAAAAGTTGC+AGG | + | chr7.2:89770688-89770707 | None:intergenic | 45.0% | |
GGAAGATAGTGTAGGAACTG+TGG | - | chr7.2:89771503-89771522 | MS.gene76967:CDS | 45.0% | |
GTAGATTTACCTGTTCCTGG+AGG | + | chr7.2:89770826-89770845 | None:intergenic | 45.0% | |
TAGCCATACCAACCACTACT+TGG | + | chr7.2:89770628-89770647 | None:intergenic | 45.0% | |
TCAAGCACTTGAGAGGAAGA+AGG | - | chr7.2:89771452-89771471 | MS.gene76967:CDS | 45.0% | |
!! | TAATAAAAATGAAAAAAATA+AGG | - | chr7.2:89771017-89771036 | MS.gene76967:CDS | 5.0% |
AGCACTTGAGAGGAAGAAGG+TGG | - | chr7.2:89771455-89771474 | MS.gene76967:CDS | 50.0% | |
ATCGGTAAGGCTTGGAAACG+CGG | - | chr7.2:89770784-89770803 | MS.gene76967:CDS | 50.0% | |
CGGCTCTTATTAGGACAGGA+AGG | - | chr7.2:89771223-89771242 | MS.gene76967:CDS | 50.0% | |
CTTTATGGTCCTCCAGGAAC+AGG | - | chr7.2:89770814-89770833 | MS.gene76967:CDS | 50.0% | |
GATCCGGCTCTTATTAGGAC+AGG | - | chr7.2:89771219-89771238 | MS.gene76967:CDS | 50.0% | |
AATCCTCTCTCCTCCACACG+CGG | + | chr7.2:89771166-89771185 | None:intergenic | 55.0% | |
GATGGAATTTGGTCCGCGTG+TGG | - | chr7.2:89771150-89771169 | MS.gene76967:CDS | 55.0% | |
GGAATTTGGTCCGCGTGTGG+AGG | - | chr7.2:89771153-89771172 | MS.gene76967:CDS | 60.0% | |
GGTCCGCGTGTGGAGGAGAG+AGG | - | chr7.2:89771160-89771179 | MS.gene76967:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.2 | gene | 89770589 | 89771581 | 89770589 | ID=MS.gene76967 |
chr7.2 | mRNA | 89770589 | 89771581 | 89770589 | ID=MS.gene76967.t1;Parent=MS.gene76967 |
chr7.2 | exon | 89770589 | 89771581 | 89770589 | ID=MS.gene76967.t1.exon1;Parent=MS.gene76967.t1 |
chr7.2 | CDS | 89770589 | 89771581 | 89770589 | ID=cds.MS.gene76967.t1;Parent=MS.gene76967.t1 |
Gene Sequence |
Protein sequence |