Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene79792.t1 | XP_003619847.2 | 97.9 | 142 | 1 | 1 | 1 | 142 | 45 | 184 | 5.60E-54 | 220.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene79792.t1 | Q6DR24 | 56.4 | 94 | 32 | 4 | 57 | 142 | 119 | 211 | 1.4e-16 | 87.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene79792.t1 | G7KQ85 | 97.9 | 142 | 1 | 1 | 1 | 142 | 45 | 184 | 4.1e-54 | 220.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049255 | MS.gene79792 | 0.800121 | 1.67E-48 | -1.69E-46 |
MS.gene049821 | MS.gene79792 | 0.806849 | 6.74E-50 | -1.69E-46 |
MS.gene051241 | MS.gene79792 | 0.843025 | 1.81E-58 | -1.69E-46 |
MS.gene05134 | MS.gene79792 | 0.800582 | 1.35E-48 | -1.69E-46 |
MS.gene051903 | MS.gene79792 | 0.8061 | 9.69E-50 | -1.69E-46 |
MS.gene052947 | MS.gene79792 | 0.818543 | 1.86E-52 | -1.69E-46 |
MS.gene05548 | MS.gene79792 | 0.809754 | 1.62E-50 | -1.69E-46 |
MS.gene055555 | MS.gene79792 | 0.817158 | 3.81E-52 | -1.69E-46 |
MS.gene055808 | MS.gene79792 | 0.803493 | 3.40E-49 | -1.69E-46 |
MS.gene056631 | MS.gene79792 | 0.813469 | 2.52E-51 | -1.69E-46 |
MS.gene057079 | MS.gene79792 | 0.802898 | 4.51E-49 | -1.69E-46 |
MS.gene057705 | MS.gene79792 | 0.868934 | 4.51E-66 | -1.69E-46 |
MS.gene05954 | MS.gene79792 | 0.802072 | 6.67E-49 | -1.69E-46 |
MS.gene060429 | MS.gene79792 | 0.811348 | 7.32E-51 | -1.69E-46 |
MS.gene060917 | MS.gene79792 | 0.81369 | 2.25E-51 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene79792.t1 | MTR_6g069830 | 95.775 | 142 | 4 | 1 | 1 | 142 | 45 | 184 | 2.19e-95 | 273 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene79792.t1 | AT3G17950 | 43.931 | 173 | 65 | 9 | 1 | 142 | 1 | 172 | 1.59e-28 | 103 |
MS.gene79792.t1 | AT3G17950 | 43.931 | 173 | 65 | 9 | 1 | 142 | 27 | 198 | 2.11e-28 | 103 |
MS.gene79792.t1 | AT3G17950 | 43.931 | 173 | 65 | 9 | 1 | 142 | 40 | 211 | 3.54e-28 | 103 |
Find 67 sgRNAs with CRISPR-Local
Find 87 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTCTTGGGTGCAATTCTAT+TGG | 0.233385 | 6.2:-72844031 | None:intergenic |
CGGCGGTGAGTCTTTGTAAT+AGG | 0.276694 | 6.2:+72844316 | MS.gene79792:CDS |
GAGTCTTTGTAATAGGTTTC+CGG | 0.280633 | 6.2:+72844323 | MS.gene79792:CDS |
GGGTATGGTGGTTGGTCATC+AGG | 0.347453 | 6.2:+72844215 | MS.gene79792:CDS |
CGGCGGAACGGCGGAGAAGG+TGG | 0.359258 | 6.2:+72844082 | MS.gene79792:CDS |
TGTGGGTCCCGGTGCTGTGA+TGG | 0.376288 | 6.2:-72843991 | None:intergenic |
GAAGGTGGTGGCAGCTATGC+AGG | 0.385670 | 6.2:+72844097 | MS.gene79792:CDS |
TGATGCAAGACCGGCGTCGC+TGG | 0.385741 | 6.2:+72844125 | MS.gene79792:CDS |
GATCCACCGGCGCCGGAATG+TGG | 0.393335 | 6.2:-72844009 | None:intergenic |
CAGCACCGGGACCCACATTC+CGG | 0.401909 | 6.2:+72843997 | MS.gene79792:CDS |
AGAAAACCCGCCGCCGTGGC+GGG | 0.413565 | 6.2:+72844057 | MS.gene79792:CDS |
AAAACCCGCCGCCGTGGCGG+GGG | 0.427001 | 6.2:+72844059 | MS.gene79792:CDS |
CTTCCGCCGGTGGGAGATGT+TGG | 0.430714 | 6.2:+72844279 | MS.gene79792:CDS |
TTGGAGGTGGAACGGCGGTT+TGG | 0.431305 | 6.2:+72844156 | MS.gene79792:CDS |
GGGCGGCGGAACGGCGGAGA+AGG | 0.433783 | 6.2:+72844079 | MS.gene79792:CDS |
TGATGGGAGGGTTCTTCCGC+CGG | 0.447513 | 6.2:+72844266 | MS.gene79792:CDS |
TGTAGCGGTGGTGCTGGGTA+GGG | 0.452432 | 6.2:+72844363 | MS.gene79792:CDS |
GAAAACCCGCCGCCGTGGCG+GGG | 0.454236 | 6.2:+72844058 | MS.gene79792:CDS |
ATGTAGCGGTGGTGCTGGGT+AGG | 0.456539 | 6.2:+72844362 | MS.gene79792:CDS |
GGAATATGTAGCGGTGGTGC+TGG | 0.460229 | 6.2:+72844357 | MS.gene79792:CDS |
GAGATGGAGGGTATGGTGGT+TGG | 0.461094 | 6.2:+72844207 | MS.gene79792:CDS |
AGCACCACCGCTACATATTC+CGG | 0.465295 | 6.2:-72844355 | None:intergenic |
GTAGCGGTGGTGCTGGGTAG+GGG | 0.482792 | 6.2:+72844364 | MS.gene79792:CDS |
GTGGAACGGCGGTTTGGCGA+CGG | 0.483995 | 6.2:+72844162 | MS.gene79792:CDS |
AGGTTTCCGGCGTCGCTCAC+CGG | 0.486411 | 6.2:+72844336 | MS.gene79792:CDS |
TGGGAGGGTTCTTCCGCCGG+TGG | 0.489383 | 6.2:+72844269 | MS.gene79792:CDS |
CATATTCCGGTGAGCGACGC+CGG | 0.490853 | 6.2:-72844342 | None:intergenic |
TTATGATACGGCGGTGGAGA+TGG | 0.491160 | 6.2:+72844191 | MS.gene79792:CDS |
GGCGGTGGAGATGGAGGGTA+TGG | 0.494956 | 6.2:+72844200 | MS.gene79792:CDS |
CGGAACGGCGGAGAAGGTGG+TGG | 0.499567 | 6.2:+72844085 | MS.gene79792:CDS |
GACCCACATTCCGGCGCCGG+TGG | 0.509072 | 6.2:+72844006 | MS.gene79792:CDS |
ATCCACCGGCGCCGGAATGT+GGG | 0.514623 | 6.2:-72844008 | None:intergenic |
TGCAATTCTATTGGATCCAC+CGG | 0.514757 | 6.2:-72844022 | None:intergenic |
CAGGGAAGGTGATGCAAGAC+CGG | 0.516382 | 6.2:+72844116 | MS.gene79792:CDS |
TGTTGGTGGCGGAGAGTCGC+CGG | 0.518059 | 6.2:+72844296 | MS.gene79792:CDS |
CGGGACCCACATTCCGGCGC+CGG | 0.518888 | 6.2:+72844003 | MS.gene79792:CDS |
GTGGGTCCCGGTGCTGTGAT+GGG | 0.519400 | 6.2:-72843990 | None:intergenic |
GATGCAAGACCGGCGTCGCT+GGG | 0.520035 | 6.2:+72844126 | MS.gene79792:CDS |
CGGCGCCGGAATGTGGGTCC+CGG | 0.521728 | 6.2:-72844002 | None:intergenic |
TCAGAGTCCCATCACAGCAC+CGG | 0.521733 | 6.2:+72843983 | MS.gene79792:CDS |
CCGCCGGTGGGAGATGTTGG+TGG | 0.522082 | 6.2:+72844282 | MS.gene79792:CDS |
GGTCATCAGGAGAGGAATGG+TGG | 0.529531 | 6.2:+72844228 | MS.gene79792:CDS |
GGGAGGGTTCTTCCGCCGGT+GGG | 0.542588 | 6.2:+72844270 | MS.gene79792:CDS |
GAGAAAACCCGCCGCCGTGG+CGG | 0.549405 | 6.2:+72844056 | MS.gene79792:CDS |
GGGACTCTGAATGTAATGGC+TGG | 0.549894 | 6.2:-72843970 | None:intergenic |
TCTATTGGATCCACCGGCGC+CGG | 0.553005 | 6.2:-72844016 | None:intergenic |
TGATGGGACTCTGAATGTAA+TGG | 0.558769 | 6.2:-72843974 | None:intergenic |
CAGAGTCCCATCACAGCACC+GGG | 0.572218 | 6.2:+72843984 | MS.gene79792:CDS |
TGATACGGCGGTGGAGATGG+AGG | 0.572658 | 6.2:+72844194 | MS.gene79792:CDS |
GAATATGTAGCGGTGGTGCT+GGG | 0.580569 | 6.2:+72844358 | MS.gene79792:CDS |
GTCATCAGGAGAGGAATGGT+GGG | 0.581048 | 6.2:+72844229 | MS.gene79792:CDS |
TGGTGGCAGCTATGCAGGGA+AGG | 0.582247 | 6.2:+72844102 | MS.gene79792:CDS |
TCAGGAGAGGAATGGTGGGA+GGG | 0.592440 | 6.2:+72844233 | MS.gene79792:CDS |
CCGGTGGGAGATGTTGGTGG+CGG | 0.594032 | 6.2:+72844285 | MS.gene79792:CDS |
GAAGAGAAAACCCGCCGCCG+TGG | 0.596274 | 6.2:+72844053 | MS.gene79792:CDS |
ATCAGGAGAGGAATGGTGGG+AGG | 0.599222 | 6.2:+72844232 | MS.gene79792:CDS |
GTTGGTCATCAGGAGAGGAA+TGG | 0.600205 | 6.2:+72844225 | MS.gene79792:CDS |
GGTGGAGATGGAGGGTATGG+TGG | 0.601560 | 6.2:+72844203 | MS.gene79792:CDS |
CTCACCGGAATATGTAGCGG+TGG | 0.634455 | 6.2:+72844351 | MS.gene79792:CDS |
GATACGGCGGTGGAGATGGA+GGG | 0.641759 | 6.2:+72844195 | MS.gene79792:CDS |
AAGGTGGTGGCAGCTATGCA+GGG | 0.642093 | 6.2:+72844098 | MS.gene79792:CDS |
TGGTGGTTGGTCATCAGGAG+AGG | 0.643264 | 6.2:+72844220 | MS.gene79792:CDS |
CCACCAACATCTCCCACCGG+CGG | 0.661620 | 6.2:-72844282 | None:intergenic |
CCGCCACCAACATCTCCCAC+CGG | 0.668859 | 6.2:-72844285 | None:intergenic |
TCGCTCACCGGAATATGTAG+CGG | 0.682710 | 6.2:+72844348 | MS.gene79792:CDS |
CTATTACAAAGACTCACCGC+CGG | 0.683157 | 6.2:-72844315 | None:intergenic |
TGGTGGCGGAGAGTCGCCGG+CGG | 0.708882 | 6.2:+72844299 | MS.gene79792:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
GAGTCTTTGTAATAGGTTTC+CGG | + | chr6.2:72844323-72844342 | MS.gene79792:CDS | 35.0% | |
CTTCTTGGGTGCAATTCTAT+TGG | - | chr6.2:72844034-72844053 | None:intergenic | 40.0% | |
TGATGGGACTCTGAATGTAA+TGG | - | chr6.2:72843977-72843996 | None:intergenic | 40.0% | |
TGCAATTCTATTGGATCCAC+CGG | - | chr6.2:72844025-72844044 | None:intergenic | 40.0% | |
!!! | GAGATTTTTTGGAGGTGGAA+CGG | + | chr6.2:72844148-72844167 | MS.gene79792:CDS | 40.0% |
CTATTACAAAGACTCACCGC+CGG | - | chr6.2:72844318-72844337 | None:intergenic | 45.0% | |
! | GCGGGTTTTCTCTTCTTCTT+GGG | - | chr6.2:72844048-72844067 | None:intergenic | 45.0% |
!!! | ATTTTTTGGAGGTGGAACGG+CGG | + | chr6.2:72844151-72844170 | MS.gene79792:CDS | 45.0% |
AAAAAATCTCCCAGCGACGC+CGG | - | chr6.2:72844138-72844157 | None:intergenic | 50.0% | |
AGCACCACCGCTACATATTC+CGG | - | chr6.2:72844358-72844377 | None:intergenic | 50.0% | |
CGGCGGTGAGTCTTTGTAAT+AGG | + | chr6.2:72844316-72844335 | MS.gene79792:CDS | 50.0% | |
GAATATGTAGCGGTGGTGCT+GGG | + | chr6.2:72844358-72844377 | MS.gene79792:CDS | 50.0% | |
GGGACTCTGAATGTAATGGC+TGG | - | chr6.2:72843973-72843992 | None:intergenic | 50.0% | |
GTCATCAGGAGAGGAATGGT+GGG | + | chr6.2:72844229-72844248 | MS.gene79792:CDS | 50.0% | |
GTTGGTCATCAGGAGAGGAA+TGG | + | chr6.2:72844225-72844244 | MS.gene79792:CDS | 50.0% | |
TCGCTCACCGGAATATGTAG+CGG | + | chr6.2:72844348-72844367 | MS.gene79792:CDS | 50.0% | |
TTATGATACGGCGGTGGAGA+TGG | + | chr6.2:72844191-72844210 | MS.gene79792:CDS | 50.0% | |
! | CGACGGCGCGTTTTATGATA+CGG | + | chr6.2:72844179-72844198 | MS.gene79792:CDS | 50.0% |
! | GGAGCTTTTTGCTGATGGGA+GGG | + | chr6.2:72844254-72844273 | MS.gene79792:CDS | 50.0% |
! | GGAGGGAGCTTTTTGCTGAT+GGG | + | chr6.2:72844250-72844269 | MS.gene79792:CDS | 50.0% |
!! | GGCGGGTTTTCTCTTCTTCT+TGG | - | chr6.2:72844049-72844068 | None:intergenic | 50.0% |
!!! | GCTGGGAGATTTTTTGGAGG+TGG | + | chr6.2:72844143-72844162 | MS.gene79792:CDS | 50.0% |
!!! | GTCGCTGGGAGATTTTTTGG+AGG | + | chr6.2:72844140-72844159 | MS.gene79792:CDS | 50.0% |
CAGGGAAGGTGATGCAAGAC+CGG | + | chr6.2:72844116-72844135 | MS.gene79792:CDS | 55.0% | |
CTCACCGGAATATGTAGCGG+TGG | + | chr6.2:72844351-72844370 | MS.gene79792:CDS | 55.0% | |
GGAATATGTAGCGGTGGTGC+TGG | + | chr6.2:72844357-72844376 | MS.gene79792:CDS | 55.0% | |
GGTCATCAGGAGAGGAATGG+TGG | + | chr6.2:72844228-72844247 | MS.gene79792:CDS | 55.0% | |
TCAGAGTCCCATCACAGCAC+CGG | + | chr6.2:72843983-72844002 | MS.gene79792:CDS | 55.0% | |
! | AAGGTGGTGGCAGCTATGCA+GGG | + | chr6.2:72844098-72844117 | MS.gene79792:CDS | 55.0% |
! | ATCAGGAGAGGAATGGTGGG+AGG | + | chr6.2:72844232-72844251 | MS.gene79792:CDS | 55.0% |
! | CGCGTTTTATGATACGGCGG+TGG | + | chr6.2:72844185-72844204 | MS.gene79792:CDS | 55.0% |
! | CGGCGCGTTTTATGATACGG+CGG | + | chr6.2:72844182-72844201 | MS.gene79792:CDS | 55.0% |
! | GAGATGGAGGGTATGGTGGT+TGG | + | chr6.2:72844207-72844226 | MS.gene79792:CDS | 55.0% |
! | GGGAGCTTTTTGCTGATGGG+AGG | + | chr6.2:72844253-72844272 | MS.gene79792:CDS | 55.0% |
! | GGGAGGGAGCTTTTTGCTGA+TGG | + | chr6.2:72844249-72844268 | MS.gene79792:CDS | 55.0% |
! | GGGTATGGTGGTTGGTCATC+AGG | + | chr6.2:72844215-72844234 | MS.gene79792:CDS | 55.0% |
! | TCAGGAGAGGAATGGTGGGA+GGG | + | chr6.2:72844233-72844252 | MS.gene79792:CDS | 55.0% |
! | TGGTGGTTGGTCATCAGGAG+AGG | + | chr6.2:72844220-72844239 | MS.gene79792:CDS | 55.0% |
!!! | GGCGTCGCTGGGAGATTTTT+TGG | + | chr6.2:72844137-72844156 | MS.gene79792:CDS | 55.0% |
CAGAGTCCCATCACAGCACC+GGG | + | chr6.2:72843984-72844003 | MS.gene79792:CDS | 60.0% | |
CATATTCCGGTGAGCGACGC+CGG | - | chr6.2:72844345-72844364 | None:intergenic | 60.0% | |
GATACGGCGGTGGAGATGGA+GGG | + | chr6.2:72844195-72844214 | MS.gene79792:CDS | 60.0% | |
TCTATTGGATCCACCGGCGC+CGG | - | chr6.2:72844019-72844038 | None:intergenic | 60.0% | |
TGATACGGCGGTGGAGATGG+AGG | + | chr6.2:72844194-72844213 | MS.gene79792:CDS | 60.0% | |
TGATGGGAGGGTTCTTCCGC+CGG | + | chr6.2:72844266-72844285 | MS.gene79792:CDS | 60.0% | |
TGGTGGCAGCTATGCAGGGA+AGG | + | chr6.2:72844102-72844121 | MS.gene79792:CDS | 60.0% | |
TTGGAGGTGGAACGGCGGTT+TGG | + | chr6.2:72844156-72844175 | MS.gene79792:CDS | 60.0% | |
! | GAAGGTGGTGGCAGCTATGC+AGG | + | chr6.2:72844097-72844116 | MS.gene79792:CDS | 60.0% |
! | GGTGGAGATGGAGGGTATGG+TGG | + | chr6.2:72844203-72844222 | MS.gene79792:CDS | 60.0% |
AGGTTTCCGGCGTCGCTCAC+CGG | + | chr6.2:72844336-72844355 | MS.gene79792:CDS | 65.0% | |
CCACCAACATCTCCCACCGG+CGG | - | chr6.2:72844285-72844304 | None:intergenic | 65.0% | |
CCGCCACCAACATCTCCCAC+CGG | - | chr6.2:72844288-72844307 | None:intergenic | 65.0% | |
CTTCCGCCGGTGGGAGATGT+TGG | + | chr6.2:72844279-72844298 | MS.gene79792:CDS | 65.0% | |
GAAGAGAAAACCCGCCGCCG+TGG | + | chr6.2:72844053-72844072 | MS.gene79792:CDS | 65.0% | |
GATGCAAGACCGGCGTCGCT+GGG | + | chr6.2:72844126-72844145 | MS.gene79792:CDS | 65.0% | |
GGCGGTGGAGATGGAGGGTA+TGG | + | chr6.2:72844200-72844219 | MS.gene79792:CDS | 65.0% | |
TGATGCAAGACCGGCGTCGC+TGG | + | chr6.2:72844125-72844144 | MS.gene79792:CDS | 65.0% | |
! | ATCCACCGGCGCCGGAATGT+GGG | - | chr6.2:72844011-72844030 | None:intergenic | 65.0% |
! | CAGCACCGGGACCCACATTC+CGG | + | chr6.2:72843997-72844016 | MS.gene79792:CDS | 65.0% |
! | CCGGTGGGAGATGTTGGTGG+CGG | + | chr6.2:72844285-72844304 | MS.gene79792:CDS | 65.0% |
! | GTGGAACGGCGGTTTGGCGA+CGG | + | chr6.2:72844162-72844181 | MS.gene79792:CDS | 65.0% |
!! | GTGGGTCCCGGTGCTGTGAT+GGG | - | chr6.2:72843993-72844012 | None:intergenic | 65.0% |
!! | TGTGGGTCCCGGTGCTGTGA+TGG | - | chr6.2:72843994-72844013 | None:intergenic | 65.0% |
!! | TGTTGGTGGCGGAGAGTCGC+CGG | + | chr6.2:72844296-72844315 | MS.gene79792:CDS | 65.0% |
AGAAAACCCGCCGCCGTGGC+GGG | + | chr6.2:72844057-72844076 | MS.gene79792:CDS | 70.0% | |
CCGCCGGTGGGAGATGTTGG+TGG | + | chr6.2:72844282-72844301 | MS.gene79792:CDS | 70.0% | |
CGGAACGGCGGAGAAGGTGG+TGG | + | chr6.2:72844085-72844104 | MS.gene79792:CDS | 70.0% | |
GAGAAAACCCGCCGCCGTGG+CGG | + | chr6.2:72844056-72844075 | MS.gene79792:CDS | 70.0% | |
GGGAGGGTTCTTCCGCCGGT+GGG | + | chr6.2:72844270-72844289 | MS.gene79792:CDS | 70.0% | |
TGGGAGGGTTCTTCCGCCGG+TGG | + | chr6.2:72844269-72844288 | MS.gene79792:CDS | 70.0% | |
! | GATCCACCGGCGCCGGAATG+TGG | - | chr6.2:72844012-72844031 | None:intergenic | 70.0% |
AAAACCCGCCGCCGTGGCGG+GGG | + | chr6.2:72844059-72844078 | MS.gene79792:CDS | 75.0% | |
CGGCGGAACGGCGGAGAAGG+TGG | + | chr6.2:72844082-72844101 | MS.gene79792:CDS | 75.0% | |
CGGGACCCACATTCCGGCGC+CGG | + | chr6.2:72844003-72844022 | MS.gene79792:CDS | 75.0% | |
GAAAACCCGCCGCCGTGGCG+GGG | + | chr6.2:72844058-72844077 | MS.gene79792:CDS | 75.0% | |
! | CGGCGCCGGAATGTGGGTCC+CGG | - | chr6.2:72844005-72844024 | None:intergenic | 75.0% |
! | GACCCACATTCCGGCGCCGG+TGG | + | chr6.2:72844006-72844025 | MS.gene79792:CDS | 75.0% |
!! | TGGTGGCGGAGAGTCGCCGG+CGG | + | chr6.2:72844299-72844318 | MS.gene79792:CDS | 75.0% |
! | GGGCGGCGGAACGGCGGAGA+AGG | + | chr6.2:72844079-72844098 | MS.gene79792:CDS | 80.0% |
! | CCGTTCCGCCGCCCCCGCCA+CGG | - | chr6.2:72844073-72844092 | None:intergenic | 85.0% |
! | TGGCGGGGGCGGCGGAACGG+CGG | + | chr6.2:72844073-72844092 | MS.gene79792:CDS | 85.0% |
! | TTCCGCCGCCCCCGCCACGG+CGG | - | chr6.2:72844070-72844089 | None:intergenic | 85.0% |
!! | CCGTGGCGGGGGCGGCGGAA+CGG | + | chr6.2:72844070-72844089 | MS.gene79792:CDS | 85.0% |
!! | ACCCGCCGCCGTGGCGGGGG+CGG | + | chr6.2:72844062-72844081 | MS.gene79792:CDS | 90.0% |
! | CGCCGCCCCCGCCACGGCGG+CGG | - | chr6.2:72844067-72844086 | None:intergenic | 95.0% |
! | GCCGCCCCCGCCACGGCGGC+GGG | - | chr6.2:72844066-72844085 | None:intergenic | 95.0% |
!! | CGCCGCCGTGGCGGGGGCGG+CGG | + | chr6.2:72844065-72844084 | MS.gene79792:CDS | 95.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.2 | gene | 72843955 | 72844383 | 72843955 | ID=MS.gene79792 |
chr6.2 | mRNA | 72843955 | 72844383 | 72843955 | ID=MS.gene79792.t1;Parent=MS.gene79792 |
chr6.2 | exon | 72843955 | 72844383 | 72843955 | ID=MS.gene79792.t1.exon1;Parent=MS.gene79792.t1 |
chr6.2 | CDS | 72843955 | 72844383 | 72843955 | ID=cds.MS.gene79792.t1;Parent=MS.gene79792.t1 |
Gene Sequence |
Protein sequence |