Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79802.t1 | KEH26686.1 | 94.3 | 389 | 22 | 0 | 1 | 389 | 1 | 389 | 3.90E-206 | 727.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79802.t1 | Q9SJZ7 | 46.3 | 337 | 173 | 4 | 8 | 344 | 113 | 441 | 3.3e-68 | 260.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79802.t1 | A0A072UB63 | 94.3 | 389 | 22 | 0 | 1 | 389 | 1 | 389 | 2.8e-206 | 727.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049297 | MS.gene79802 | 0.832839 | 7.52E-56 | -1.69E-46 |
| MS.gene050226 | MS.gene79802 | 0.821794 | 3.34E-53 | -1.69E-46 |
| MS.gene050227 | MS.gene79802 | 0.820947 | 5.24E-53 | -1.69E-46 |
| MS.gene050228 | MS.gene79802 | 0.820614 | 6.25E-53 | -1.69E-46 |
| MS.gene050303 | MS.gene79802 | 0.808468 | 3.05E-50 | -1.69E-46 |
| MS.gene050623 | MS.gene79802 | -0.836323 | 1.00E-56 | -1.69E-46 |
| MS.gene050642 | MS.gene79802 | 0.831676 | 1.46E-55 | -1.69E-46 |
| MS.gene051662 | MS.gene79802 | 0.820408 | 6.97E-53 | -1.69E-46 |
| MS.gene051663 | MS.gene79802 | 0.809764 | 1.61E-50 | -1.69E-46 |
| MS.gene051983 | MS.gene79802 | 0.800211 | 1.60E-48 | -1.69E-46 |
| MS.gene052176 | MS.gene79802 | 0.810059 | 1.39E-50 | -1.69E-46 |
| MS.gene052302 | MS.gene79802 | 0.805154 | 1.53E-49 | -1.69E-46 |
| MS.gene052376 | MS.gene79802 | 0.815953 | 7.10E-52 | -1.69E-46 |
| MS.gene052600 | MS.gene79802 | 0.806978 | 6.33E-50 | -1.69E-46 |
| MS.gene052856 | MS.gene79802 | 0.830373 | 3.05E-55 | -1.69E-46 |
| MS.gene052858 | MS.gene79802 | 0.809282 | 2.04E-50 | -1.69E-46 |
| MS.gene052860 | MS.gene79802 | 0.803286 | 3.75E-49 | -1.69E-46 |
| MS.gene053836 | MS.gene79802 | 0.81101 | 8.67E-51 | -1.69E-46 |
| MS.gene054942 | MS.gene79802 | 0.833434 | 5.35E-56 | -1.69E-46 |
| MS.gene056979 | MS.gene79802 | 0.803095 | 4.10E-49 | -1.69E-46 |
| MS.gene058749 | MS.gene79802 | 0.80956 | 1.78E-50 | -1.69E-46 |
| MS.gene060476 | MS.gene79802 | 0.802106 | 6.57E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene79802 | MS.gene57358 | PPI |
| MS.gene030874 | MS.gene79802 | PPI |
| MS.gene27999 | MS.gene79802 | PPI |
| MS.gene47969 | MS.gene79802 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79802.t1 | MTR_6g471050 | 95.116 | 389 | 19 | 0 | 1 | 389 | 1 | 389 | 0.0 | 769 |
| MS.gene79802.t1 | MTR_2g104030 | 48.052 | 385 | 192 | 3 | 7 | 384 | 96 | 479 | 1.42e-118 | 353 |
| MS.gene79802.t1 | MTR_3g087030 | 43.902 | 328 | 175 | 3 | 8 | 334 | 109 | 428 | 1.87e-85 | 266 |
| MS.gene79802.t1 | MTR_3g027580 | 30.028 | 353 | 208 | 8 | 7 | 350 | 115 | 437 | 2.41e-41 | 151 |
| MS.gene79802.t1 | MTR_4g023470 | 30.218 | 321 | 210 | 5 | 9 | 328 | 114 | 421 | 2.54e-41 | 151 |
| MS.gene79802.t1 | MTR_5g065160 | 30.952 | 336 | 201 | 8 | 7 | 332 | 109 | 423 | 9.99e-41 | 150 |
| MS.gene79802.t1 | MTR_5g065160 | 30.952 | 336 | 201 | 8 | 7 | 332 | 108 | 422 | 1.21e-40 | 149 |
| MS.gene79802.t1 | MTR_5g065160 | 30.952 | 336 | 201 | 8 | 7 | 332 | 109 | 423 | 1.90e-40 | 149 |
| MS.gene79802.t1 | MTR_5g065160 | 30.952 | 336 | 201 | 8 | 7 | 332 | 102 | 416 | 2.10e-40 | 149 |
| MS.gene79802.t1 | MTR_8g006430 | 30.460 | 348 | 221 | 9 | 9 | 347 | 42 | 377 | 1.01e-36 | 138 |
| MS.gene79802.t1 | MTR_4g023490 | 28.818 | 347 | 196 | 9 | 9 | 332 | 43 | 361 | 6.68e-34 | 130 |
| MS.gene79802.t1 | MTR_2g087660 | 29.552 | 335 | 216 | 10 | 9 | 336 | 41 | 362 | 2.34e-29 | 118 |
| MS.gene79802.t1 | MTR_4g050420 | 31.875 | 320 | 196 | 10 | 9 | 321 | 41 | 345 | 4.36e-29 | 117 |
| MS.gene79802.t1 | MTR_2g087660 | 32.946 | 258 | 158 | 7 | 9 | 263 | 41 | 286 | 1.75e-27 | 111 |
| MS.gene79802.t1 | MTR_7g109340 | 28.614 | 332 | 189 | 15 | 7 | 331 | 52 | 342 | 5.20e-21 | 93.6 |
| MS.gene79802.t1 | MTR_4g015840 | 26.190 | 336 | 213 | 11 | 7 | 333 | 30 | 339 | 4.44e-15 | 76.3 |
| MS.gene79802.t1 | MTR_2g014470 | 24.286 | 350 | 202 | 14 | 7 | 333 | 30 | 339 | 1.63e-14 | 74.3 |
| MS.gene79802.t1 | MTR_2g090705 | 31.169 | 154 | 67 | 4 | 7 | 121 | 30 | 183 | 5.96e-12 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79802.t1 | AT3G17830 | 59.173 | 387 | 135 | 5 | 7 | 387 | 89 | 458 | 4.86e-139 | 407 |
| MS.gene79802.t1 | AT1G80030 | 46.615 | 384 | 200 | 2 | 7 | 385 | 101 | 484 | 4.23e-117 | 349 |
| MS.gene79802.t1 | AT1G80030 | 46.615 | 384 | 200 | 2 | 7 | 385 | 101 | 484 | 1.11e-116 | 349 |
| MS.gene79802.t1 | AT1G80030 | 46.615 | 384 | 200 | 2 | 7 | 385 | 101 | 484 | 1.11e-116 | 349 |
| MS.gene79802.t1 | AT1G80030 | 46.615 | 384 | 200 | 2 | 7 | 385 | 101 | 484 | 1.11e-116 | 349 |
| MS.gene79802.t1 | AT2G22360 | 43.620 | 337 | 182 | 3 | 8 | 344 | 113 | 441 | 2.57e-86 | 269 |
| MS.gene79802.t1 | AT4G39960 | 41.964 | 336 | 192 | 3 | 8 | 342 | 112 | 445 | 1.11e-80 | 254 |
| MS.gene79802.t1 | AT4G39960 | 41.964 | 336 | 192 | 3 | 8 | 342 | 112 | 445 | 1.11e-80 | 254 |
| MS.gene79802.t1 | AT5G48030 | 34.421 | 337 | 193 | 7 | 7 | 332 | 120 | 439 | 2.43e-51 | 178 |
| MS.gene79802.t1 | AT1G28210 | 32.132 | 333 | 197 | 7 | 7 | 332 | 74 | 384 | 1.58e-45 | 162 |
| MS.gene79802.t1 | AT1G28210 | 32.132 | 333 | 197 | 7 | 7 | 332 | 74 | 384 | 1.75e-45 | 161 |
| MS.gene79802.t1 | AT1G28210 | 32.132 | 333 | 197 | 7 | 7 | 332 | 74 | 384 | 2.14e-45 | 162 |
| MS.gene79802.t1 | AT5G22060 | 32.537 | 335 | 196 | 11 | 9 | 331 | 42 | 358 | 6.78e-39 | 144 |
| MS.gene79802.t1 | AT3G44110 | 31.420 | 331 | 204 | 11 | 9 | 331 | 42 | 357 | 6.59e-32 | 125 |
| MS.gene79802.t1 | AT3G44110 | 32.131 | 305 | 184 | 11 | 9 | 305 | 42 | 331 | 6.82e-29 | 115 |
| MS.gene79802.t1 | AT5G25530 | 24.484 | 339 | 214 | 9 | 7 | 333 | 30 | 338 | 8.18e-17 | 81.3 |
| MS.gene79802.t1 | AT3G62600 | 25.526 | 333 | 200 | 15 | 7 | 331 | 52 | 344 | 3.61e-14 | 73.6 |
| MS.gene79802.t1 | AT3G08910 | 23.582 | 335 | 205 | 9 | 7 | 333 | 30 | 321 | 2.09e-13 | 70.9 |
| MS.gene79802.t1 | AT1G59725 | 25.770 | 357 | 164 | 14 | 7 | 326 | 30 | 322 | 6.10e-12 | 66.6 |
| MS.gene79802.t1 | AT2G20560 | 24.852 | 338 | 209 | 11 | 7 | 331 | 30 | 335 | 7.82e-12 | 66.2 |
Find 99 sgRNAs with CRISPR-Local
Find 265 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTATAATAATGTTTATATTT+TGG | 0.101057 | 6.2:-73007294 | None:intergenic |
| GTTGAATTCCAGAAGGAATT+TGG | 0.183173 | 6.2:+73004057 | None:intergenic |
| GATTTATTCGATGCATTCTT+TGG | 0.243839 | 6.2:-73006650 | MS.gene79802:CDS |
| TGACTTCACCGAGGCAATAC+TGG | 0.271495 | 6.2:-73004504 | MS.gene79802:CDS |
| TTCTTATTCCTAATGATATC+AGG | 0.288183 | 6.2:-73003947 | MS.gene79802:intron |
| CATTGTTTCAGGCGTTATAC+TGG | 0.296138 | 6.2:-73004608 | MS.gene79802:intron |
| AATACTGGGGTCTGTTAAAA+AGG | 0.300732 | 6.2:-73004489 | MS.gene79802:intron |
| TTCAGTGAAGTTATCACGTT+TGG | 0.306742 | 6.2:-73004027 | MS.gene79802:CDS |
| GTGAAGCTGCAAGTTCTCTA+TGG | 0.317089 | 6.2:-73003565 | MS.gene79802:CDS |
| AGGGACCTCCAAATTCCTTC+TGG | 0.323728 | 6.2:-73004065 | MS.gene79802:CDS |
| TTGAACTTCTCTTCTGCTCC+AGG | 0.329970 | 6.2:+73007241 | None:intergenic |
| TCAGGTCTACAAGGAGAAAA+TGG | 0.333077 | 6.2:-73006829 | MS.gene79802:CDS |
| TCATTCCAAACGGTGTTCTC+TGG | 0.333239 | 6.2:+73006133 | None:intergenic |
| TGCTCTAAGTGTGGTGGTCT+TGG | 0.351429 | 6.2:-73005978 | MS.gene79802:CDS |
| ACATGAACAGACCATCTATT+CGG | 0.398530 | 6.2:-73003995 | MS.gene79802:CDS |
| AATACGAACCTGATATCATT+AGG | 0.400786 | 6.2:+73003939 | None:intergenic |
| TGTTCATATCTGGATGGTAC+TGG | 0.405419 | 6.2:+73007269 | None:intergenic |
| GAAACCGCGGCATTGATATT+CGG | 0.406393 | 6.2:-73006568 | MS.gene79802:intron |
| TATGATCGCTTTGGTGAGTC+AGG | 0.416527 | 6.2:-73006847 | MS.gene79802:CDS |
| CATGAACAGACCATCTATTC+GGG | 0.428035 | 6.2:-73003994 | MS.gene79802:CDS |
| GACTTCACCGAGGCAATACT+GGG | 0.448295 | 6.2:-73004503 | MS.gene79802:CDS |
| GATCAATCAAGAACTTCTTA+AGG | 0.450941 | 6.2:-73003541 | MS.gene79802:intron |
| ATTGTTTCAGGCGTTATACT+GGG | 0.451438 | 6.2:-73004607 | MS.gene79802:intron |
| ATAGATGGTCTGTTCATGTC+TGG | 0.453436 | 6.2:+73003999 | None:intergenic |
| TAATGATCGCCCCGAATAGA+TGG | 0.460565 | 6.2:+73003984 | None:intergenic |
| CATTCCAAACGGTGTTCTCT+GGG | 0.468491 | 6.2:+73006134 | None:intergenic |
| CATCTAGACGAGGTCATTCA+TGG | 0.471829 | 6.2:-73003783 | MS.gene79802:CDS |
| TGAACTTCTCTTCTGCTCCA+GGG | 0.476271 | 6.2:+73007242 | None:intergenic |
| TCAGTGAAGTTATCACGTTT+GGG | 0.477807 | 6.2:-73004026 | MS.gene79802:CDS |
| CGATGCATTCTTTGGTCGTA+CGG | 0.481300 | 6.2:-73006642 | MS.gene79802:CDS |
| ATGGAAGTGGTCATCCCTCC+TGG | 0.483864 | 6.2:-73005891 | MS.gene79802:CDS |
| ATCCCTCCTGGCGTCAGTGA+TGG | 0.486884 | 6.2:-73005879 | MS.gene79802:CDS |
| CGCTTTCCAGGGCAACGTAA+AGG | 0.487943 | 6.2:-73003644 | MS.gene79802:intron |
| TGAAGCTGCAAGTTCTCTAT+GGG | 0.492016 | 6.2:-73003564 | MS.gene79802:CDS |
| AGGTCTTTATATGATCGCTT+TGG | 0.492333 | 6.2:-73006856 | MS.gene79802:CDS |
| AAAACCCAGAGAACACCGTT+TGG | 0.501194 | 6.2:-73006138 | MS.gene79802:CDS |
| ACAATGAAAATTCGAGGAGA+AGG | 0.504568 | 6.2:-73005852 | MS.gene79802:CDS |
| GATGGACTATTTAGTGATGA+AGG | 0.505113 | 6.2:-73006620 | MS.gene79802:CDS |
| TGCACAAATTGTGGTGGCAA+AGG | 0.511466 | 6.2:-73006171 | MS.gene79802:CDS |
| GAGAAGGGAATTTCGATAAG+AGG | 0.511708 | 6.2:-73005836 | MS.gene79802:CDS |
| GCATTCTTTGGTCGTACGGA+TGG | 0.513581 | 6.2:-73006638 | MS.gene79802:CDS |
| TCCTATCAGATGATGAGAAA+AGG | 0.515761 | 6.2:-73006876 | MS.gene79802:CDS |
| TGGAGCAGAAGAGAAGTTCA+AGG | 0.520981 | 6.2:-73007239 | MS.gene79802:CDS |
| ACCGTTTGGAATGATGTCTC+AGG | 0.534377 | 6.2:-73006124 | MS.gene79802:intron |
| TTTCAGGTAGAAACTGTTGA+AGG | 0.538364 | 6.2:-73004092 | MS.gene79802:intron |
| AAGCAAGGAATTTGGAGAGA+GGG | 0.538545 | 6.2:-73004554 | MS.gene79802:CDS |
| AGCTTCACTTCCCTCGCTTG+AGG | 0.540349 | 6.2:+73003580 | None:intergenic |
| AAGGGAATTTCGATAAGAGG+AGG | 0.542384 | 6.2:-73005833 | MS.gene79802:intron |
| TTCGGCTTCAATATGAGAAA+CGG | 0.544779 | 6.2:-73006593 | MS.gene79802:CDS |
| ACAGGAGCTAAATCAAAGAA+TGG | 0.546893 | 6.2:-73006204 | MS.gene79802:CDS |
| ACCTGAGACATCATTCCAAA+CGG | 0.550571 | 6.2:+73006123 | None:intergenic |
| AACAGACCCCAGTATTGCCT+CGG | 0.554381 | 6.2:+73004496 | None:intergenic |
| CAATGAAAATTCGAGGAGAA+GGG | 0.556403 | 6.2:-73005851 | MS.gene79802:CDS |
| GGAGACACAATGAAAATTCG+AGG | 0.557189 | 6.2:-73005858 | MS.gene79802:CDS |
| ATGGACTATTTAGTGATGAA+GGG | 0.559499 | 6.2:-73006619 | MS.gene79802:CDS |
| GTGTCTCCATCACTGACGCC+AGG | 0.560225 | 6.2:+73005873 | None:intergenic |
| TGTAATACTTGTGATGGTAC+AGG | 0.562080 | 6.2:-73006222 | MS.gene79802:CDS |
| CATACATACCTCTGAGGCAC+TGG | 0.564421 | 6.2:+73006798 | None:intergenic |
| ACAAATTGTGGTGGCAAAGG+AGG | 0.565258 | 6.2:-73006168 | MS.gene79802:CDS |
| GAATTCCAGAAGGAATTTGG+AGG | 0.570654 | 6.2:+73004060 | None:intergenic |
| ACAAGGAGAAAATGGAGGAC+CGG | 0.571120 | 6.2:-73006821 | MS.gene79802:CDS |
| TTTGGTGAGTCAGGTCTACA+AGG | 0.577889 | 6.2:-73006838 | MS.gene79802:CDS |
| AAAGGTGATGCCTCAAGCGA+GGG | 0.580290 | 6.2:-73003590 | MS.gene79802:CDS |
| TGTCGAAAGTGTGATGGCAG+CGG | 0.589319 | 6.2:-73005936 | MS.gene79802:CDS |
| ATGAGAAACGGTGGAAACCG+CGG | 0.593568 | 6.2:-73006581 | MS.gene79802:CDS |
| ATTCCTTCTGGAATTCAACA+TGG | 0.594310 | 6.2:-73004053 | MS.gene79802:CDS |
| ATTCAATGATTCCATGTGGA+GGG | 0.594784 | 6.2:-73003618 | MS.gene79802:CDS |
| AAATCCATGTTCTAGTGGCA+CGG | 0.596018 | 6.2:-73003842 | MS.gene79802:intron |
| AATGCATCGAATAAATCAGA+AGG | 0.597218 | 6.2:+73006656 | None:intergenic |
| ATTCTTCAAAGCTTAAACGA+AGG | 0.598290 | 6.2:+73006292 | None:intergenic |
| AATTCAATGATTCCATGTGG+AGG | 0.599123 | 6.2:-73003619 | MS.gene79802:CDS |
| TGGACTATTTAGTGATGAAG+GGG | 0.607794 | 6.2:-73006618 | MS.gene79802:CDS |
| AAAAGGTGATGCCTCAAGCG+AGG | 0.610380 | 6.2:-73003591 | MS.gene79802:CDS |
| CTCCATCACTGACGCCAGGA+GGG | 0.614117 | 6.2:+73005877 | None:intergenic |
| AAGACCACCACACTTAGAGC+AGG | 0.615518 | 6.2:+73005980 | None:intergenic |
| TCTACCTGCTCTAAGTGTGG+TGG | 0.615829 | 6.2:-73005984 | MS.gene79802:CDS |
| GTTTCTACCTGCTCTAAGTG+TGG | 0.618459 | 6.2:-73005987 | MS.gene79802:CDS |
| TTGTTTCAGGCGTTATACTG+GGG | 0.623502 | 6.2:-73004606 | MS.gene79802:intron |
| GATAGATGTCGAAAGTGTGA+TGG | 0.632715 | 6.2:-73005942 | MS.gene79802:CDS |
| CATACCTCTGAGGCACTGGC+CGG | 0.632877 | 6.2:+73006802 | None:intergenic |
| GGCTTCAATATGAGAAACGG+TGG | 0.634398 | 6.2:-73006590 | MS.gene79802:CDS |
| TCATGGTCTTCTGATGACAC+TGG | 0.640448 | 6.2:-73003766 | MS.gene79802:intron |
| AAAGCAAGGAATTTGGAGAG+AGG | 0.642614 | 6.2:-73004555 | MS.gene79802:CDS |
| TGTCCATGTTGAATTCCAGA+AGG | 0.644115 | 6.2:+73004050 | None:intergenic |
| TGGTCTTGGCATGATAATCA+CGG | 0.645622 | 6.2:-73005964 | MS.gene79802:CDS |
| GGAGATTAGTGCTGCATACG+AGG | 0.654402 | 6.2:-73007218 | MS.gene79802:intron |
| TCTCCATCACTGACGCCAGG+AGG | 0.657616 | 6.2:+73005876 | None:intergenic |
| AGGACCGGCCAGTGCCTCAG+AGG | 0.659812 | 6.2:-73006806 | MS.gene79802:intron |
| GAGACATGTAATACTTGTGA+TGG | 0.663501 | 6.2:-73006228 | MS.gene79802:CDS |
| GAAAATTCAATGATTCCATG+TGG | 0.664296 | 6.2:-73003622 | MS.gene79802:CDS |
| GGACTATTTAGTGATGAAGG+GGG | 0.697900 | 6.2:-73006617 | MS.gene79802:CDS |
| TTTACCGAATATCAATGCCG+CGG | 0.702531 | 6.2:+73006564 | None:intergenic |
| GGTCTACAAGGAGAAAATGG+AGG | 0.704500 | 6.2:-73006826 | MS.gene79802:CDS |
| GAAGCTGCAAGTTCTCTATG+GGG | 0.724482 | 6.2:-73003563 | MS.gene79802:CDS |
| TATAGGCATACATACCTCTG+AGG | 0.728459 | 6.2:+73006792 | None:intergenic |
| TCACTTCGAGCATCTAGACG+AGG | 0.728768 | 6.2:-73003793 | MS.gene79802:CDS |
| ATGAACAGACCATCTATTCG+GGG | 0.753380 | 6.2:-73003993 | MS.gene79802:CDS |
| ACTTCACCGAGGCAATACTG+GGG | 0.762116 | 6.2:-73004502 | MS.gene79802:CDS |
| GATTAACATTGACTTCACCG+AGG | 0.767270 | 6.2:-73004513 | MS.gene79802:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTATTATTATTATTATTAT+TGG | - | chr6.2:73004268-73004287 | MS.gene79802:intron | 0.0% |
| !!! | TAGAATTTTATCTTTATATT+GGG | - | chr6.2:73006332-73006351 | MS.gene79802:intron | 10.0% |
| !!! | TTAGAATTTTATCTTTATAT+TGG | - | chr6.2:73006331-73006350 | MS.gene79802:intron | 10.0% |
| !! | ATAATCTATGTCTATTTAAA+CGG | - | chr6.2:73004335-73004354 | MS.gene79802:intron | 15.0% |
| !! | CAGATAATTTAAATATAACT+GGG | + | chr6.2:73004664-73004683 | None:intergenic | 15.0% |
| !! | CTATAAATATTTATCAAACA+GGG | - | chr6.2:73003570-73003589 | MS.gene79802:CDS | 15.0% |
| !! | TAGAAAAAAGAAATTAATAC+TGG | - | chr6.2:73005215-73005234 | MS.gene79802:intron | 15.0% |
| !! | TCAGATAATTTAAATATAAC+TGG | + | chr6.2:73004665-73004684 | None:intergenic | 15.0% |
| !!! | ACTTCATTTTTTTGTAAAAA+TGG | + | chr6.2:73004185-73004204 | None:intergenic | 15.0% |
| !!! | ATTATTGGTTATAATTGTAT+TGG | - | chr6.2:73004283-73004302 | MS.gene79802:intron | 15.0% |
| !!! | ATTTAAGATAAGATTCTTTT+TGG | + | chr6.2:73006460-73006479 | None:intergenic | 15.0% |
| !!! | CAAATGATTTTTGTTATTTA+AGG | - | chr6.2:73006396-73006415 | MS.gene79802:intron | 15.0% |
| !!! | TATTTATTGACTTGATTATA+CGG | - | chr6.2:73004974-73004993 | MS.gene79802:intron | 15.0% |
| !! | AAAGAGAACTTCAAAAAATA+CGG | - | chr6.2:73005972-73005991 | MS.gene79802:CDS | 20.0% |
| !! | ATGTGTAAAAATAATTCTTC+TGG | + | chr6.2:73005887-73005906 | None:intergenic | 20.0% |
| !! | ATTAAAAAATGCACAAATTG+TGG | - | chr6.2:73004537-73004556 | MS.gene79802:CDS | 20.0% |
| !! | CTATCTTTGGATTTATTTAA+GGG | - | chr6.2:73003594-73003613 | MS.gene79802:CDS | 20.0% |
| !! | GCTATAAATATTTATCAAAC+AGG | - | chr6.2:73003569-73003588 | MS.gene79802:CDS | 20.0% |
| !! | TACTTAATTAACCCAAAAAA+TGG | - | chr6.2:73006254-73006273 | MS.gene79802:CDS | 20.0% |
| !! | TCTATCTTTGGATTTATTTA+AGG | - | chr6.2:73003593-73003612 | MS.gene79802:CDS | 20.0% |
| !! | TGAAAATCAATAATTTCTTG+TGG | + | chr6.2:73005719-73005738 | None:intergenic | 20.0% |
| !! | TGATCAATACAAAATAAAAC+AGG | + | chr6.2:73004034-73004053 | None:intergenic | 20.0% |
| !!! | AAAATTTTACTGAACATTGA+AGG | - | chr6.2:73007021-73007040 | MS.gene79802:intron | 20.0% |
| !!! | CTTAAATATGTTGTTTGATT+AGG | - | chr6.2:73006473-73006492 | MS.gene79802:intron | 20.0% |
| !!! | TAAGATAAGATTCTAAAAGT+AGG | + | chr6.2:73006429-73006448 | None:intergenic | 20.0% |
| !!! | TGTTTTATTTTGTATTGATC+AGG | - | chr6.2:73004033-73004052 | MS.gene79802:CDS | 20.0% |
| !!! | TTGCATGAATATTTAGAATT+GGG | - | chr6.2:73007268-73007287 | MS.gene79802:CDS | 20.0% |
| !!! | TTTGCATGAATATTTAGAAT+TGG | - | chr6.2:73007267-73007286 | MS.gene79802:CDS | 20.0% |
| ! | AAGAGAACTTCAAAAAATAC+GGG | - | chr6.2:73005973-73005992 | MS.gene79802:CDS | 25.0% |
| ! | AAGGCAAAATACTTGAATAT+AGG | + | chr6.2:73003945-73003964 | None:intergenic | 25.0% |
| ! | ACCATTAGATAATCTCAAAT+AGG | + | chr6.2:73005092-73005111 | None:intergenic | 25.0% |
| ! | ATAAAAAATGACAATGCAGT+AGG | - | chr6.2:73005259-73005278 | MS.gene79802:intron | 25.0% |
| ! | CTAGAAAACATTTGACATTT+AGG | + | chr6.2:73005678-73005697 | None:intergenic | 25.0% |
| ! | GAAGATGAAAAGAATTATGA+TGG | + | chr6.2:73003641-73003660 | None:intergenic | 25.0% |
| ! | TAAAAAATGACAATGCAGTA+GGG | - | chr6.2:73005260-73005279 | MS.gene79802:intron | 25.0% |
| ! | TAAAAAGAGACAAGCAAATA+TGG | + | chr6.2:73003792-73003811 | None:intergenic | 25.0% |
| ! | TAGAGAATATATCATTGTAG+CGG | + | chr6.2:73003543-73003562 | None:intergenic | 25.0% |
| ! | TATACGTATTCATAATGTAC+AGG | + | chr6.2:73004368-73004387 | None:intergenic | 25.0% |
| ! | TATGCAACAAAAACAACTTA+TGG | + | chr6.2:73005169-73005188 | None:intergenic | 25.0% |
| ! | TTCTAACTTCTATGAAGAAT+GGG | + | chr6.2:73005403-73005422 | None:intergenic | 25.0% |
| ! | TTCTTATCATTGCAAATATG+AGG | - | chr6.2:73005791-73005810 | MS.gene79802:intron | 25.0% |
| ! | TTCTTATTCCTAATGATATC+AGG | - | chr6.2:73006770-73006789 | MS.gene79802:intron | 25.0% |
| !! | TAAGATAAGATTCTTTTTGG+TGG | + | chr6.2:73006457-73006476 | None:intergenic | 25.0% |
| !!! | AAAGAAAAGTGTCGTTTTTT+TGG | - | chr6.2:73005996-73006015 | MS.gene79802:intron | 25.0% |
| !!! | ATTCATCACTTTTCAGTTAA+AGG | + | chr6.2:73005362-73005381 | None:intergenic | 25.0% |
| !!! | CATTATTGTTGCCATTTTTT+GGG | + | chr6.2:73006268-73006287 | None:intergenic | 25.0% |
| !!! | GTATTTTTTGAAGTTCTCTT+TGG | + | chr6.2:73005973-73005992 | None:intergenic | 25.0% |
| !!! | TGCAATGATAAGAAGTATTT+TGG | + | chr6.2:73005785-73005804 | None:intergenic | 25.0% |
| !!! | TTGTTTTACTTCAACACTAT+TGG | - | chr6.2:73006981-73007000 | MS.gene79802:intron | 25.0% |
| AAAAAATGCACAAATTGTGG+TGG | - | chr6.2:73004540-73004559 | MS.gene79802:CDS | 30.0% | |
| AATACGAACCTGATATCATT+AGG | + | chr6.2:73006781-73006800 | None:intergenic | 30.0% | |
| AATGCATCGAATAAATCAGA+AGG | + | chr6.2:73004064-73004083 | None:intergenic | 30.0% | |
| ACATTACCATAAAACCTTTC+CGG | - | chr6.2:73005903-73005922 | MS.gene79802:CDS | 30.0% | |
| ATGAACTCTAGACTTTGATA+TGG | - | chr6.2:73003979-73003998 | MS.gene79802:CDS | 30.0% | |
| ATTAAGCTGTTTATCCAAAC+AGG | - | chr6.2:73005651-73005670 | MS.gene79802:intron | 30.0% | |
| ATTCTTCAAAGCTTAAACGA+AGG | + | chr6.2:73004428-73004447 | None:intergenic | 30.0% | |
| ATTCTTCTGGTGTTTAGTAT+AGG | + | chr6.2:73005874-73005893 | None:intergenic | 30.0% | |
| CCAAAAAATGGCAACAATAA+TGG | - | chr6.2:73006266-73006285 | MS.gene79802:CDS | 30.0% | |
| CCAACTAATGTACTAAATAG+GGG | + | chr6.2:73005475-73005494 | None:intergenic | 30.0% | |
| CCCAACTAATGTACTAAATA+GGG | + | chr6.2:73005476-73005495 | None:intergenic | 30.0% | |
| CCCTATTTAGTACATTAGTT+GGG | - | chr6.2:73005473-73005492 | MS.gene79802:intron | 30.0% | |
| GAAAATTCAATGATTCCATG+TGG | - | chr6.2:73007095-73007114 | MS.gene79802:intron | 30.0% | |
| GAAGTAGTAAAGACTAAAGA+TGG | + | chr6.2:73006811-73006830 | None:intergenic | 30.0% | |
| GATCAATCAAGAACTTCTTA+AGG | - | chr6.2:73007176-73007195 | MS.gene79802:intron | 30.0% | |
| GATTTATTCGATGCATTCTT+TGG | - | chr6.2:73004067-73004086 | MS.gene79802:CDS | 30.0% | |
| GTTCTAACTTCTATGAAGAA+TGG | + | chr6.2:73005404-73005423 | None:intergenic | 30.0% | |
| TCATAAAATCCCCAAAACTA+AGG | + | chr6.2:73006364-73006383 | None:intergenic | 30.0% | |
| TCGATAAAAAGCAAGGAATT+TGG | - | chr6.2:73006155-73006174 | MS.gene79802:CDS | 30.0% | |
| TCTAACTTCTATGAAGAATG+GGG | + | chr6.2:73005402-73005421 | None:intergenic | 30.0% | |
| TGGTAACAAAGTATGCAAAT+AGG | - | chr6.2:73003818-73003837 | MS.gene79802:CDS | 30.0% | |
| TTAAGCTGTTTATCCAAACA+GGG | - | chr6.2:73005652-73005671 | MS.gene79802:intron | 30.0% | |
| TTCACATCACCCTTAAATAA+GGG | - | chr6.2:73005052-73005071 | MS.gene79802:intron | 30.0% | |
| TTTCACATCACCCTTAAATA+AGG | - | chr6.2:73005051-73005070 | MS.gene79802:intron | 30.0% | |
| TTTCCTTCATCTAGTAAACA+AGG | - | chr6.2:73003709-73003728 | MS.gene79802:intron | 30.0% | |
| ! | AGAAACTGTTGAAGGTTTTA+GGG | - | chr6.2:73006633-73006652 | MS.gene79802:CDS | 30.0% |
| ! | ATGGACTATTTAGTGATGAA+GGG | - | chr6.2:73004098-73004117 | MS.gene79802:intron | 30.0% |
| ! | CTTGTCTCTTTTTATTCACT+TGG | - | chr6.2:73003798-73003817 | MS.gene79802:CDS | 30.0% |
| ! | GCCTATTTGAGATTATCTAA+TGG | - | chr6.2:73005088-73005107 | MS.gene79802:intron | 30.0% |
| ! | TAGAAACTGTTGAAGGTTTT+AGG | - | chr6.2:73006632-73006651 | MS.gene79802:CDS | 30.0% |
| ! | TTTTCAGTTAAAGGCTTAGA+AGG | + | chr6.2:73005353-73005372 | None:intergenic | 30.0% |
| ! | TTTTCTACATTCTACAATGC+AGG | - | chr6.2:73004397-73004416 | MS.gene79802:intron | 30.0% |
| !! | CTTATTTCTATAAGTTCTCC+AGG | - | chr6.2:73005532-73005551 | MS.gene79802:intron | 30.0% |
| !! | TCAGGTTTTTGAAGGATATA+AGG | + | chr6.2:73006833-73006852 | None:intergenic | 30.0% |
| !! | TTTGAAGAATCCATTTTTGG+AGG | - | chr6.2:73004438-73004457 | MS.gene79802:intron | 30.0% |
| !!! | AGCTTTGAAGAATCCATTTT+TGG | - | chr6.2:73004435-73004454 | MS.gene79802:intron | 30.0% |
| !!! | CCATTATTGTTGCCATTTTT+TGG | + | chr6.2:73006269-73006288 | None:intergenic | 30.0% |
| !!! | GCTATTTTTATAAGCTATCC+TGG | + | chr6.2:73005553-73005572 | None:intergenic | 30.0% |
| !!! | GTTTTGACTTTCGTTATTTC+AGG | - | chr6.2:73006609-73006628 | MS.gene79802:CDS | 30.0% |
| !!! | TCTACTGTTTTATTTGCTCA+TGG | - | chr6.2:73003664-73003683 | MS.gene79802:intron | 30.0% |
| AAATAAGGGTCTGTTTGGAT+TGG | - | chr6.2:73005066-73005085 | MS.gene79802:intron | 35.0% | |
| AACACTCGTAGACATACAAT+AGG | + | chr6.2:73006589-73006608 | None:intergenic | 35.0% | |
| AAGGAAAGATTACAATGCCA+AGG | + | chr6.2:73003696-73003715 | None:intergenic | 35.0% | |
| AATACTGGGGTCTGTTAAAA+AGG | - | chr6.2:73006228-73006247 | MS.gene79802:CDS | 35.0% | |
| AATGATGCCATGTGATATTC+AGG | - | chr6.2:73004708-73004727 | MS.gene79802:intron | 35.0% | |
| AATTCAATGATTCCATGTGG+AGG | - | chr6.2:73007098-73007117 | MS.gene79802:intron | 35.0% | |
| ACAATGAAAATTCGAGGAGA+AGG | - | chr6.2:73004865-73004884 | MS.gene79802:intron | 35.0% | |
| ACAGGAGCTAAATCAAAGAA+TGG | - | chr6.2:73004513-73004532 | MS.gene79802:CDS | 35.0% | |
| ACATGAACAGACCATCTATT+CGG | - | chr6.2:73006722-73006741 | MS.gene79802:intron | 35.0% | |
| AGATTGTTTGGGAGAACTTA+TGG | - | chr6.2:73005125-73005144 | MS.gene79802:intron | 35.0% | |
| AGCTAAACGAAAAATGGAAG+TGG | - | chr6.2:73004813-73004832 | MS.gene79802:intron | 35.0% | |
| AGGTCTTTATATGATCGCTT+TGG | - | chr6.2:73003861-73003880 | MS.gene79802:intron | 35.0% | |
| ATTCAATGATTCCATGTGGA+GGG | - | chr6.2:73007099-73007118 | MS.gene79802:intron | 35.0% | |
| ATTGTTTCAGGCGTTATACT+GGG | - | chr6.2:73006110-73006129 | MS.gene79802:intron | 35.0% | |
| CAATGAAAATTCGAGGAGAA+GGG | - | chr6.2:73004866-73004885 | MS.gene79802:intron | 35.0% | |
| CATACAATAGGCAACAAACA+TGG | + | chr6.2:73006577-73006596 | None:intergenic | 35.0% | |
| CCCCTATTTAGTACATTAGT+TGG | - | chr6.2:73005472-73005491 | MS.gene79802:intron | 35.0% | |
| CGTCATTGCAAAAAATCAAC+CGG | + | chr6.2:73005925-73005944 | None:intergenic | 35.0% | |
| CTATATGTGCTAATTCTGGT+TGG | - | chr6.2:73007219-73007238 | MS.gene79802:CDS | 35.0% | |
| GAGACATGTAATACTTGTGA+TGG | - | chr6.2:73004489-73004508 | MS.gene79802:intron | 35.0% | |
| GCCCAACTAATGTACTAAAT+AGG | + | chr6.2:73005477-73005496 | None:intergenic | 35.0% | |
| GGCTGGATGAATGAAATTTA+TGG | - | chr6.2:73003730-73003749 | MS.gene79802:intron | 35.0% | |
| GTAGAAACCTGAATATCACA+TGG | + | chr6.2:73004718-73004737 | None:intergenic | 35.0% | |
| GTTGAATTCCAGAAGGAATT+TGG | + | chr6.2:73006663-73006682 | None:intergenic | 35.0% | |
| TATCAAACAGGGTCTATCTT+TGG | - | chr6.2:73003581-73003600 | MS.gene79802:CDS | 35.0% | |
| TATCCTTCAAAAACCTGAAG+TGG | - | chr6.2:73006835-73006854 | MS.gene79802:CDS | 35.0% | |
| TCAGTGAAGTTATCACGTTT+GGG | - | chr6.2:73006691-73006710 | MS.gene79802:intron | 35.0% | |
| TCCTATCAGATGATGAGAAA+AGG | - | chr6.2:73003841-73003860 | MS.gene79802:intron | 35.0% | |
| TGGACTATTTAGTGATGAAG+GGG | - | chr6.2:73004099-73004118 | MS.gene79802:intron | 35.0% | |
| TGTAATACTTGTGATGGTAC+AGG | - | chr6.2:73004495-73004514 | MS.gene79802:CDS | 35.0% | |
| TGTGCAAGCTAAACGAAAAA+TGG | - | chr6.2:73004807-73004826 | MS.gene79802:intron | 35.0% | |
| TGTGCTATATGTGCTAATTC+TGG | - | chr6.2:73007215-73007234 | MS.gene79802:intron | 35.0% | |
| TTAGTACATTAGTTGGGCTT+AGG | - | chr6.2:73005479-73005498 | MS.gene79802:intron | 35.0% | |
| TTCAGTGAAGTTATCACGTT+TGG | - | chr6.2:73006690-73006709 | MS.gene79802:intron | 35.0% | |
| TTCATTTCGACATTTGCAGA+AGG | + | chr6.2:73003964-73003983 | None:intergenic | 35.0% | |
| TTCGGCTTCAATATGAGAAA+CGG | - | chr6.2:73004124-73004143 | MS.gene79802:intron | 35.0% | |
| TTGCAAAAAATCAACCGGAA+AGG | + | chr6.2:73005920-73005939 | None:intergenic | 35.0% | |
| ! | AATCAACCGGAAAGGTTTTA+TGG | + | chr6.2:73005912-73005931 | None:intergenic | 35.0% |
| ! | ACCTTTTCTCATCATCTGAT+AGG | + | chr6.2:73003845-73003864 | None:intergenic | 35.0% |
| ! | CCAAACAGACCCTTATTTAA+GGG | + | chr6.2:73005064-73005083 | None:intergenic | 35.0% |
| ! | GGTTTTTGTTCATATCTGGA+TGG | + | chr6.2:73003457-73003476 | None:intergenic | 35.0% |
| ! | TCCAAACAGACCCTTATTTA+AGG | + | chr6.2:73005065-73005084 | None:intergenic | 35.0% |
| ! | TTGGGATCTTTCCTTAGTTT+TGG | - | chr6.2:73006350-73006369 | MS.gene79802:intron | 35.0% |
| ! | TTGTATTGGTCTCATTAGTC+AGG | - | chr6.2:73004297-73004316 | MS.gene79802:intron | 35.0% |
| ! | TTTCAGGTAGAAACTGTTGA+AGG | - | chr6.2:73006625-73006644 | MS.gene79802:CDS | 35.0% |
| !! | AAACCACTTCAGGTTTTTGA+AGG | + | chr6.2:73006841-73006860 | None:intergenic | 35.0% |
| !! | ATTCCTTCTGGAATTCAACA+TGG | - | chr6.2:73006664-73006683 | MS.gene79802:CDS | 35.0% |
| !! | CTTAGTGCTGACTATTAGTT+TGG | - | chr6.2:73006084-73006103 | MS.gene79802:intron | 35.0% |
| !! | GATGGACTATTTAGTGATGA+AGG | - | chr6.2:73004097-73004116 | MS.gene79802:intron | 35.0% |
| !! | TGGGATCTTTCCTTAGTTTT+GGG | - | chr6.2:73006351-73006370 | MS.gene79802:intron | 35.0% |
| !! | TTAGTTTGGTGCATTGTTTC+AGG | - | chr6.2:73006098-73006117 | MS.gene79802:intron | 35.0% |
| !!! | CGGTTGATTTTTTGCAATGA+CGG | - | chr6.2:73005923-73005942 | MS.gene79802:CDS | 35.0% |
| !!! | GAAGTATTTTGGCTCTTCAA+TGG | + | chr6.2:73005774-73005793 | None:intergenic | 35.0% |
| !!! | TTCCTTGCTTTTTATCGACA+TGG | + | chr6.2:73006153-73006172 | None:intergenic | 35.0% |
| !!! | TTGTTTTTGTTGCATACCAC+AGG | - | chr6.2:73005173-73005192 | MS.gene79802:intron | 35.0% |
| AAAGCAAGGAATTTGGAGAG+AGG | - | chr6.2:73006162-73006181 | MS.gene79802:CDS | 40.0% | |
| AAATCCATGTTCTAGTGGCA+CGG | - | chr6.2:73006875-73006894 | MS.gene79802:CDS | 40.0% | |
| AAGCAAGGAATTTGGAGAGA+GGG | - | chr6.2:73006163-73006182 | MS.gene79802:CDS | 40.0% | |
| AAGCCCTTGTGAGATTGTTT+GGG | - | chr6.2:73005114-73005133 | MS.gene79802:intron | 40.0% | |
| AAGGGAATTTCGATAAGAGG+AGG | - | chr6.2:73004884-73004903 | MS.gene79802:intron | 40.0% | |
| AATGGGGATAGCAAATAGAG+GGG | + | chr6.2:73005386-73005405 | None:intergenic | 40.0% | |
| ACCTGAGACATCATTCCAAA+CGG | + | chr6.2:73004597-73004616 | None:intergenic | 40.0% | |
| AGAATGAAGGAAACCACTTC+AGG | + | chr6.2:73006851-73006870 | None:intergenic | 40.0% | |
| AGAATGGGGATAGCAAATAG+AGG | + | chr6.2:73005388-73005407 | None:intergenic | 40.0% | |
| ATAGATGGTCTGTTCATGTC+TGG | + | chr6.2:73006721-73006740 | None:intergenic | 40.0% | |
| ATGAACAGACCATCTATTCG+GGG | - | chr6.2:73006724-73006743 | MS.gene79802:intron | 40.0% | |
| CATGAACAGACCATCTATTC+GGG | - | chr6.2:73006723-73006742 | MS.gene79802:intron | 40.0% | |
| CATGGATTTGAGGAGAATGA+AGG | + | chr6.2:73006864-73006883 | None:intergenic | 40.0% | |
| CATTGTTTCAGGCGTTATAC+TGG | - | chr6.2:73006109-73006128 | MS.gene79802:intron | 40.0% | |
| CCAGATATGAACAAAAACCC+TGG | - | chr6.2:73003458-73003477 | MS.gene79802:intron | 40.0% | |
| CCCTTAAATAAGGGTCTGTT+TGG | - | chr6.2:73005061-73005080 | MS.gene79802:intron | 40.0% | |
| CTCCATGTCGATAAAAAGCA+AGG | - | chr6.2:73006148-73006167 | MS.gene79802:CDS | 40.0% | |
| CTCTAACAAACTAGCCACAT+CGG | - | chr6.2:73005434-73005453 | MS.gene79802:intron | 40.0% | |
| CTCTCTCTTTCCTCCAAAAA+TGG | + | chr6.2:73004451-73004470 | None:intergenic | 40.0% | |
| CTGAAAGAGCAATGCTATGT+GGG | + | chr6.2:73005307-73005326 | None:intergenic | 40.0% | |
| CTTCATCTAGTAAACAAGGC+TGG | - | chr6.2:73003713-73003732 | MS.gene79802:intron | 40.0% | |
| GAATGGGGATAGCAAATAGA+GGG | + | chr6.2:73005387-73005406 | None:intergenic | 40.0% | |
| GAATTCCAGAAGGAATTTGG+AGG | + | chr6.2:73006660-73006679 | None:intergenic | 40.0% | |
| GAGAAGGGAATTTCGATAAG+AGG | - | chr6.2:73004881-73004900 | MS.gene79802:intron | 40.0% | |
| GGACTATTTAGTGATGAAGG+GGG | - | chr6.2:73004100-73004119 | MS.gene79802:intron | 40.0% | |
| GGAGACACAATGAAAATTCG+AGG | - | chr6.2:73004859-73004878 | MS.gene79802:intron | 40.0% | |
| TATAGGCATACATACCTCTG+AGG | + | chr6.2:73003928-73003947 | None:intergenic | 40.0% | |
| TCAGGTCTACAAGGAGAAAA+TGG | - | chr6.2:73003888-73003907 | MS.gene79802:intron | 40.0% | |
| TCCATGTGGAGGGATAAAAA+AGG | - | chr6.2:73007109-73007128 | MS.gene79802:intron | 40.0% | |
| TCCTCAAATCCATGTTCTAG+TGG | - | chr6.2:73006870-73006889 | MS.gene79802:CDS | 40.0% | |
| TCTCCCAAACAATCTCACAA+GGG | + | chr6.2:73005120-73005139 | None:intergenic | 40.0% | |
| TCTGAAAGAGCAATGCTATG+TGG | + | chr6.2:73005308-73005327 | None:intergenic | 40.0% | |
| TCTGACAATCTTTCTGCTTC+TGG | + | chr6.2:73006037-73006056 | None:intergenic | 40.0% | |
| TGAAGCTGCAAGTTCTCTAT+GGG | - | chr6.2:73007153-73007172 | MS.gene79802:intron | 40.0% | |
| TGGCTTCATGGTAAACTAGT+TGG | + | chr6.2:73005751-73005770 | None:intergenic | 40.0% | |
| TGTCCATGTTGAATTCCAGA+AGG | + | chr6.2:73006670-73006689 | None:intergenic | 40.0% | |
| TGTTCATATCTGGATGGTAC+TGG | + | chr6.2:73003451-73003470 | None:intergenic | 40.0% | |
| TTCTCCCAAACAATCTCACA+AGG | + | chr6.2:73005121-73005140 | None:intergenic | 40.0% | |
| TTGTTTCAGGCGTTATACTG+GGG | - | chr6.2:73006111-73006130 | MS.gene79802:intron | 40.0% | |
| TTTACCGAATATCAATGCCG+CGG | + | chr6.2:73004156-73004175 | None:intergenic | 40.0% | |
| TTTCACAAATGCGCTTTCCA+GGG | - | chr6.2:73007062-73007081 | MS.gene79802:intron | 40.0% | |
| TTTGACATTTAGGCCCTGTT+TGG | + | chr6.2:73005668-73005687 | None:intergenic | 40.0% | |
| ! | AATTTTCCTTTACGTTGCCC+TGG | + | chr6.2:73007082-73007101 | None:intergenic | 40.0% |
| ! | CCAGGGTTTTTGTTCATATC+TGG | + | chr6.2:73003461-73003480 | None:intergenic | 40.0% |
| ! | GATAGATGTCGAAAGTGTGA+TGG | - | chr6.2:73004775-73004794 | MS.gene79802:intron | 40.0% |
| ! | GTTTGTTACATTTGCCGATG+TGG | + | chr6.2:73005451-73005470 | None:intergenic | 40.0% |
| ! | TGGTCTTGGCATGATAATCA+CGG | - | chr6.2:73004753-73004772 | MS.gene79802:intron | 40.0% |
| ! | TTTTCACAAATGCGCTTTCC+AGG | - | chr6.2:73007061-73007080 | MS.gene79802:intron | 40.0% |
| !! | ATGTGGCTAGTTTGTTAGAG+GGG | + | chr6.2:73005434-73005453 | None:intergenic | 40.0% |
| !! | CAGCCTTGTTTACTAGATGA+AGG | + | chr6.2:73003715-73003734 | None:intergenic | 40.0% |
| !! | GATGTGGCTAGTTTGTTAGA+GGG | + | chr6.2:73005435-73005454 | None:intergenic | 40.0% |
| !! | GATTAACATTGACTTCACCG+AGG | - | chr6.2:73006204-73006223 | MS.gene79802:CDS | 40.0% |
| !!! | ACCTTTTTTATCCCTCCACA+TGG | + | chr6.2:73007113-73007132 | None:intergenic | 40.0% |
| !!! | CTTGCTTTTTATCGACATGG+AGG | + | chr6.2:73006150-73006169 | None:intergenic | 40.0% |
| !!! | GGGATCTTTCCTTAGTTTTG+GGG | - | chr6.2:73006352-73006371 | MS.gene79802:intron | 40.0% |
| !!! | GTATTTTGGCTCTTCAATGG+TGG | + | chr6.2:73005771-73005790 | None:intergenic | 40.0% |
| !!! | TGGATGCTTGTCTTTTTCAG+TGG | - | chr6.2:73003750-73003769 | MS.gene79802:intron | 40.0% |
| AAAACCCAGAGAACACCGTT+TGG | - | chr6.2:73004579-73004598 | MS.gene79802:CDS | 45.0% | |
| AAAGAGCAATGCTATGTGGG+TGG | + | chr6.2:73005304-73005323 | None:intergenic | 45.0% | |
| AAGAGCAATGCTATGTGGGT+GGG | + | chr6.2:73005303-73005322 | None:intergenic | 45.0% | |
| ACAAATTGTGGTGGCAAAGG+AGG | - | chr6.2:73004549-73004568 | MS.gene79802:CDS | 45.0% | |
| ACAAGGAGAAAATGGAGGAC+CGG | - | chr6.2:73003896-73003915 | MS.gene79802:intron | 45.0% | |
| ATAAGAGGAGGTTAGCAGCA+TGG | - | chr6.2:73004896-73004915 | MS.gene79802:intron | 45.0% | |
| CATCTAGACGAGGTCATTCA+TGG | - | chr6.2:73006934-73006953 | MS.gene79802:intron | 45.0% | |
| CATTCCAAACGGTGTTCTCT+GGG | + | chr6.2:73004586-73004605 | None:intergenic | 45.0% | |
| CGATGCATTCTTTGGTCGTA+CGG | - | chr6.2:73004075-73004094 | MS.gene79802:CDS | 45.0% | |
| GAAGCCCTTGTGAGATTGTT+TGG | - | chr6.2:73005113-73005132 | MS.gene79802:intron | 45.0% | |
| GAAGCTGCAAGTTCTCTATG+GGG | - | chr6.2:73007154-73007173 | MS.gene79802:intron | 45.0% | |
| GCCACTAGAACATGGATTTG+AGG | + | chr6.2:73006874-73006893 | None:intergenic | 45.0% | |
| GGCTTCAATATGAGAAACGG+TGG | - | chr6.2:73004127-73004146 | MS.gene79802:intron | 45.0% | |
| GGTCTACAAGGAGAAAATGG+AGG | - | chr6.2:73003891-73003910 | MS.gene79802:intron | 45.0% | |
| GTGAAGCTGCAAGTTCTCTA+TGG | - | chr6.2:73007152-73007171 | MS.gene79802:intron | 45.0% | |
| TAATGATCGCCCCGAATAGA+TGG | + | chr6.2:73006736-73006755 | None:intergenic | 45.0% | |
| TATGATCGCTTTGGTGAGTC+AGG | - | chr6.2:73003870-73003889 | MS.gene79802:intron | 45.0% | |
| TCATGGTCTTCTGATGACAC+TGG | - | chr6.2:73006951-73006970 | MS.gene79802:intron | 45.0% | |
| TCATTCCAAACGGTGTTCTC+TGG | + | chr6.2:73004587-73004606 | None:intergenic | 45.0% | |
| TGAACTTCTCTTCTGCTCCA+GGG | + | chr6.2:73003478-73003497 | None:intergenic | 45.0% | |
| TGCACAAATTGTGGTGGCAA+AGG | - | chr6.2:73004546-73004565 | MS.gene79802:CDS | 45.0% | |
| TGGAGCAGAAGAGAAGTTCA+AGG | - | chr6.2:73003478-73003497 | MS.gene79802:intron | 45.0% | |
| TTGAACTTCTCTTCTGCTCC+AGG | + | chr6.2:73003479-73003498 | None:intergenic | 45.0% | |
| TTTAGTGATGAAGGGGGCTT+CGG | - | chr6.2:73004106-73004125 | MS.gene79802:intron | 45.0% | |
| TTTGCTCATGGTCTGAACCT+TGG | - | chr6.2:73003676-73003695 | MS.gene79802:intron | 45.0% | |
| TTTGGTGAGTCAGGTCTACA+AGG | - | chr6.2:73003879-73003898 | MS.gene79802:intron | 45.0% | |
| ! | ACCGTTTGGAATGATGTCTC+AGG | - | chr6.2:73004593-73004612 | MS.gene79802:CDS | 45.0% |
| ! | GTTTCTACCTGCTCTAAGTG+TGG | - | chr6.2:73004730-73004749 | MS.gene79802:intron | 45.0% |
| !! | CGATGTGGCTAGTTTGTTAG+AGG | + | chr6.2:73005436-73005455 | None:intergenic | 45.0% |
| !! | GAAACCGCGGCATTGATATT+CGG | - | chr6.2:73004149-73004168 | MS.gene79802:intron | 45.0% |
| !! | AAAAATAAATTAATGAAATA+GGG | + | chr6.2:73005822-73005841 | None:intergenic | 5.0% |
| !! | TAAAAATAAATTAATGAAAT+AGG | + | chr6.2:73005823-73005842 | None:intergenic | 5.0% |
| AAAAGGTGATGCCTCAAGCG+AGG | - | chr6.2:73007126-73007145 | MS.gene79802:intron | 50.0% | |
| AAAGGTGATGCCTCAAGCGA+GGG | - | chr6.2:73007127-73007146 | MS.gene79802:intron | 50.0% | |
| AACAGACCCCAGTATTGCCT+CGG | + | chr6.2:73006224-73006243 | None:intergenic | 50.0% | |
| AAGACCACCACACTTAGAGC+AGG | + | chr6.2:73004740-73004759 | None:intergenic | 50.0% | |
| ACTTCACCGAGGCAATACTG+GGG | - | chr6.2:73006215-73006234 | MS.gene79802:CDS | 50.0% | |
| AGGGACCTCCAAATTCCTTC+TGG | - | chr6.2:73006652-73006671 | MS.gene79802:CDS | 50.0% | |
| ATGAGAAACGGTGGAAACCG+CGG | - | chr6.2:73004136-73004155 | MS.gene79802:intron | 50.0% | |
| GACTTCACCGAGGCAATACT+GGG | - | chr6.2:73006214-73006233 | MS.gene79802:CDS | 50.0% | |
| GCATTCTTTGGTCGTACGGA+TGG | - | chr6.2:73004079-73004098 | MS.gene79802:CDS | 50.0% | |
| GCTCTTCAATGGTGGCTTCA+TGG | + | chr6.2:73005763-73005782 | None:intergenic | 50.0% | |
| GGAGATTAGTGCTGCATACG+AGG | - | chr6.2:73003499-73003518 | MS.gene79802:intron | 50.0% | |
| GGCTTAGGCTCAAACTTGGT+TGG | - | chr6.2:73005494-73005513 | MS.gene79802:intron | 50.0% | |
| GTTGGGCTTAGGCTCAAACT+TGG | - | chr6.2:73005490-73005509 | MS.gene79802:intron | 50.0% | |
| TCACTTCGAGCATCTAGACG+AGG | - | chr6.2:73006924-73006943 | MS.gene79802:intron | 50.0% | |
| TGACTTCACCGAGGCAATAC+TGG | - | chr6.2:73006213-73006232 | MS.gene79802:CDS | 50.0% | |
| TTTGTGCGTTGCTGTACCTG+TGG | + | chr6.2:73005192-73005211 | None:intergenic | 50.0% | |
| ! | TCTACCTGCTCTAAGTGTGG+TGG | - | chr6.2:73004733-73004752 | MS.gene79802:intron | 50.0% |
| ! | TGCTCTAAGTGTGGTGGTCT+TGG | - | chr6.2:73004739-73004758 | MS.gene79802:intron | 50.0% |
| ! | TGTCGAAAGTGTGATGGCAG+CGG | - | chr6.2:73004781-73004800 | MS.gene79802:intron | 50.0% |
| !! | CATACATACCTCTGAGGCAC+TGG | + | chr6.2:73003922-73003941 | None:intergenic | 50.0% |
| AGCTTCACTTCCCTCGCTTG+AGG | + | chr6.2:73007140-73007159 | None:intergenic | 55.0% | |
| ATGGAAGTGGTCATCCCTCC+TGG | - | chr6.2:73004826-73004845 | MS.gene79802:intron | 55.0% | |
| CGCTTTCCAGGGCAACGTAA+AGG | - | chr6.2:73007073-73007092 | MS.gene79802:intron | 55.0% | |
| GCTATGTGGGTGGGTAGTCA+GGG | + | chr6.2:73005294-73005313 | None:intergenic | 55.0% | |
| TGCTATGTGGGTGGGTAGTC+AGG | + | chr6.2:73005295-73005314 | None:intergenic | 55.0% | |
| ! | CGTTCCGTGCCACTAGAACA+TGG | + | chr6.2:73006882-73006901 | None:intergenic | 55.0% |
| ATCCCTCCTGGCGTCAGTGA+TGG | - | chr6.2:73004838-73004857 | MS.gene79802:intron | 60.0% | |
| CTCCATCACTGACGCCAGGA+GGG | + | chr6.2:73004843-73004862 | None:intergenic | 60.0% | |
| GTGTCTCCATCACTGACGCC+AGG | + | chr6.2:73004847-73004866 | None:intergenic | 60.0% | |
| TCTCCATCACTGACGCCAGG+AGG | + | chr6.2:73004844-73004863 | None:intergenic | 60.0% | |
| !! | CATACCTCTGAGGCACTGGC+CGG | + | chr6.2:73003918-73003937 | None:intergenic | 60.0% |
| AGGACCGGCCAGTGCCTCAG+AGG | - | chr6.2:73003911-73003930 | MS.gene79802:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.2 | gene | 73003431 | 73007308 | 73003431 | ID=MS.gene79802 |
| chr6.2 | mRNA | 73003431 | 73007308 | 73003431 | ID=MS.gene79802.t1;Parent=MS.gene79802 |
| chr6.2 | exon | 73007219 | 73007308 | 73007219 | ID=MS.gene79802.t1.exon1;Parent=MS.gene79802.t1 |
| chr6.2 | CDS | 73007219 | 73007308 | 73007219 | ID=cds.MS.gene79802.t1;Parent=MS.gene79802.t1 |
| chr6.2 | exon | 73006807 | 73006899 | 73006807 | ID=MS.gene79802.t1.exon2;Parent=MS.gene79802.t1 |
| chr6.2 | CDS | 73006807 | 73006899 | 73006807 | ID=cds.MS.gene79802.t1;Parent=MS.gene79802.t1 |
| chr6.2 | exon | 73006569 | 73006684 | 73006569 | ID=MS.gene79802.t1.exon3;Parent=MS.gene79802.t1 |
| chr6.2 | CDS | 73006569 | 73006684 | 73006569 | ID=cds.MS.gene79802.t1;Parent=MS.gene79802.t1 |
| chr6.2 | exon | 73006125 | 73006320 | 73006125 | ID=MS.gene79802.t1.exon4;Parent=MS.gene79802.t1 |
| chr6.2 | CDS | 73006125 | 73006320 | 73006125 | ID=cds.MS.gene79802.t1;Parent=MS.gene79802.t1 |
| chr6.2 | exon | 73005834 | 73006009 | 73005834 | ID=MS.gene79802.t1.exon5;Parent=MS.gene79802.t1 |
| chr6.2 | CDS | 73005834 | 73006009 | 73005834 | ID=cds.MS.gene79802.t1;Parent=MS.gene79802.t1 |
| chr6.2 | exon | 73004490 | 73004619 | 73004490 | ID=MS.gene79802.t1.exon6;Parent=MS.gene79802.t1 |
| chr6.2 | CDS | 73004490 | 73004619 | 73004490 | ID=cds.MS.gene79802.t1;Parent=MS.gene79802.t1 |
| chr6.2 | exon | 73003948 | 73004108 | 73003948 | ID=MS.gene79802.t1.exon7;Parent=MS.gene79802.t1 |
| chr6.2 | CDS | 73003948 | 73004108 | 73003948 | ID=cds.MS.gene79802.t1;Parent=MS.gene79802.t1 |
| chr6.2 | exon | 73003767 | 73003849 | 73003767 | ID=MS.gene79802.t1.exon8;Parent=MS.gene79802.t1 |
| chr6.2 | CDS | 73003767 | 73003849 | 73003767 | ID=cds.MS.gene79802.t1;Parent=MS.gene79802.t1 |
| chr6.2 | exon | 73003542 | 73003656 | 73003542 | ID=MS.gene79802.t1.exon9;Parent=MS.gene79802.t1 |
| chr6.2 | CDS | 73003542 | 73003656 | 73003542 | ID=cds.MS.gene79802.t1;Parent=MS.gene79802.t1 |
| chr6.2 | exon | 73003431 | 73003455 | 73003431 | ID=MS.gene79802.t1.exon10;Parent=MS.gene79802.t1 |
| chr6.2 | CDS | 73003431 | 73003455 | 73003431 | ID=cds.MS.gene79802.t1;Parent=MS.gene79802.t1 |
| Gene Sequence |
| Protein sequence |
