Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82552.t1 | XP_003600917.1 | 94.2 | 1089 | 55 | 2 | 1 | 1089 | 1 | 1081 | 0.00E+00 | 1991.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82552.t1 | F4IGZ2 | 36.9 | 1093 | 465 | 27 | 1 | 1071 | 1 | 890 | 2.4e-161 | 571.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82552.t1 | G7JBS8 | 94.2 | 1089 | 55 | 2 | 1 | 1089 | 1 | 1081 | 0.0e+00 | 1991.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050787 | MS.gene82552 | 0.802632 | 5.12E-49 | -1.69E-46 |
| MS.gene051568 | MS.gene82552 | 0.825379 | 4.84E-54 | -1.69E-46 |
| MS.gene051588 | MS.gene82552 | 0.812374 | 4.38E-51 | -1.69E-46 |
| MS.gene052011 | MS.gene82552 | -0.825947 | 3.55E-54 | -1.69E-46 |
| MS.gene054173 | MS.gene82552 | 0.803342 | 3.65E-49 | -1.69E-46 |
| MS.gene054183 | MS.gene82552 | 0.835054 | 2.10E-56 | -1.69E-46 |
| MS.gene054719 | MS.gene82552 | 0.827626 | 1.41E-54 | -1.69E-46 |
| MS.gene054920 | MS.gene82552 | 0.818759 | 1.66E-52 | -1.69E-46 |
| MS.gene055217 | MS.gene82552 | 0.810306 | 1.23E-50 | -1.69E-46 |
| MS.gene055356 | MS.gene82552 | 0.835472 | 1.64E-56 | -1.69E-46 |
| MS.gene055358 | MS.gene82552 | 0.854797 | 9.69E-62 | -1.69E-46 |
| MS.gene055804 | MS.gene82552 | 0.822228 | 2.65E-53 | -1.69E-46 |
| MS.gene05594 | MS.gene82552 | 0.82298 | 1.77E-53 | -1.69E-46 |
| MS.gene056953 | MS.gene82552 | 0.820815 | 5.62E-53 | -1.69E-46 |
| MS.gene057469 | MS.gene82552 | 0.825929 | 3.58E-54 | -1.69E-46 |
| MS.gene057826 | MS.gene82552 | 0.802757 | 4.82E-49 | -1.69E-46 |
| MS.gene057863 | MS.gene82552 | 0.817648 | 2.96E-52 | -1.69E-46 |
| MS.gene058935 | MS.gene82552 | 0.80418 | 2.44E-49 | -1.69E-46 |
| MS.gene059420 | MS.gene82552 | 0.820246 | 7.59E-53 | -1.69E-46 |
| MS.gene061114 | MS.gene82552 | -0.820687 | 6.01E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82552.t1 | MTR_3g070850 | 94.766 | 1089 | 49 | 2 | 1 | 1089 | 1 | 1081 | 0.0 | 1993 |
| MS.gene82552.t1 | MTR_7g056197 | 72.049 | 576 | 95 | 9 | 265 | 836 | 56 | 569 | 0.0 | 760 |
| MS.gene82552.t1 | MTR_3g464150 | 38.354 | 1142 | 589 | 31 | 1 | 1089 | 1 | 1080 | 0.0 | 635 |
| MS.gene82552.t1 | MTR_5g071060 | 39.289 | 1125 | 577 | 32 | 1 | 1073 | 1 | 1071 | 0.0 | 619 |
| MS.gene82552.t1 | MTR_5g071060 | 39.033 | 1117 | 558 | 31 | 1 | 1073 | 1 | 1038 | 0.0 | 605 |
| MS.gene82552.t1 | MTR_4g129230 | 27.933 | 1142 | 588 | 44 | 1 | 1061 | 1 | 988 | 1.81e-89 | 310 |
| MS.gene82552.t1 | MTR_2g038200 | 32.710 | 428 | 215 | 14 | 1 | 384 | 1 | 399 | 1.67e-38 | 156 |
| MS.gene82552.t1 | MTR_1g090640 | 27.925 | 530 | 303 | 20 | 10 | 508 | 11 | 492 | 1.28e-35 | 146 |
| MS.gene82552.t1 | MTR_1g057150 | 30.361 | 415 | 222 | 16 | 1 | 383 | 1 | 380 | 7.56e-35 | 144 |
| MS.gene82552.t1 | MTR_1g057150 | 29.825 | 171 | 106 | 3 | 694 | 850 | 561 | 731 | 4.82e-13 | 73.9 |
| MS.gene82552.t1 | MTR_4g127290 | 42.012 | 169 | 84 | 4 | 9 | 174 | 9 | 166 | 1.55e-24 | 111 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82552.t1 | AT2G29970 | 38.104 | 1097 | 542 | 35 | 1 | 1075 | 1 | 982 | 0.0 | 601 |
| MS.gene82552.t1 | AT1G07200 | 36.104 | 1119 | 538 | 34 | 1 | 1086 | 1 | 975 | 0.0 | 571 |
| MS.gene82552.t1 | AT2G40130 | 48.218 | 477 | 203 | 13 | 1 | 465 | 1 | 445 | 4.85e-123 | 400 |
| MS.gene82552.t1 | AT2G40130 | 35.076 | 459 | 231 | 11 | 623 | 1071 | 486 | 887 | 8.17e-70 | 252 |
| MS.gene82552.t1 | AT2G40130 | 48.218 | 477 | 203 | 13 | 1 | 465 | 1 | 445 | 6.01e-123 | 399 |
| MS.gene82552.t1 | AT2G40130 | 35.076 | 459 | 231 | 11 | 623 | 1071 | 489 | 890 | 8.65e-70 | 252 |
| MS.gene82552.t1 | AT1G07200 | 32.285 | 477 | 238 | 16 | 620 | 1086 | 17 | 418 | 4.14e-54 | 195 |
| MS.gene82552.t1 | AT5G57710 | 34.531 | 501 | 244 | 20 | 1 | 464 | 1 | 454 | 3.80e-52 | 199 |
| MS.gene82552.t1 | AT5G57710 | 26.984 | 378 | 231 | 8 | 696 | 1061 | 610 | 954 | 6.80e-35 | 145 |
| MS.gene82552.t1 | AT4G30350 | 34.286 | 420 | 209 | 15 | 1 | 384 | 1 | 389 | 8.50e-39 | 157 |
| MS.gene82552.t1 | AT4G30350 | 26.984 | 378 | 225 | 13 | 696 | 1070 | 571 | 900 | 1.23e-32 | 137 |
| MS.gene82552.t1 | AT3G52490 | 31.281 | 406 | 202 | 17 | 7 | 382 | 7 | 365 | 2.07e-37 | 152 |
| MS.gene82552.t1 | AT3G52490 | 27.684 | 177 | 107 | 4 | 691 | 850 | 570 | 742 | 1.51e-13 | 75.9 |
| MS.gene82552.t1 | AT4G29920 | 43.094 | 181 | 86 | 4 | 1 | 174 | 1 | 171 | 2.54e-27 | 120 |
| MS.gene82552.t1 | AT4G29920 | 43.094 | 181 | 86 | 4 | 1 | 174 | 1 | 171 | 2.60e-27 | 120 |
| MS.gene82552.t1 | AT5G57130 | 28.690 | 481 | 233 | 21 | 1 | 384 | 1 | 468 | 1.94e-26 | 117 |
Find 235 sgRNAs with CRISPR-Local
Find 310 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAAAGTTACTTGAAATTTC+TGG | 0.131871 | 3.1:+58115279 | MS.gene82552:CDS |
| TTGTCTGCATCAAACTATTT+TGG | 0.192047 | 3.1:-58117543 | None:intergenic |
| GAAGGTGTTGTTGAGGAATT+AGG | 0.206769 | 3.1:+58115199 | MS.gene82552:CDS |
| TAGCCGTATCTGCGAGTAAA+TGG | 0.216279 | 3.1:-58117759 | None:intergenic |
| ACTGCATTCATTCATTTCTT+TGG | 0.229474 | 3.1:-58117308 | None:intergenic |
| TACTCGCAGATACGGCTAAA+AGG | 0.266878 | 3.1:+58117764 | MS.gene82552:CDS |
| CCGGGTGTTATAGTGAGTTT+TGG | 0.278369 | 3.1:+58115136 | MS.gene82552:CDS |
| AATAACTTCAACAAAATTCT+TGG | 0.287837 | 3.1:+58117997 | MS.gene82552:CDS |
| AAGCTTGAAGTAAATCGATT+AGG | 0.295089 | 3.1:-58116947 | None:intergenic |
| TTTCCTCATGATAATCAATA+TGG | 0.295994 | 3.1:+58116103 | MS.gene82552:CDS |
| ACCGGTTTCGAATTCGCTTA+TGG | 0.305716 | 3.1:+58114499 | MS.gene82552:CDS |
| AGCTTGAAGTAAATCGATTA+GGG | 0.309570 | 3.1:-58116946 | None:intergenic |
| GCTGGGTTTGGATTTGGATT+AGG | 0.309595 | 3.1:+58114815 | MS.gene82552:CDS |
| TGGAACATATCAGTTAGATT+TGG | 0.312456 | 3.1:-58116725 | None:intergenic |
| TTTAAAGCTTGGATTGCTTC+TGG | 0.320278 | 3.1:-58114245 | None:intergenic |
| GTTTGGATGAAGAGATTATC+AGG | 0.325217 | 3.1:+58116972 | MS.gene82552:CDS |
| ATTTACTTCAAGCTTAAGTT+TGG | 0.327831 | 3.1:+58116955 | MS.gene82552:CDS |
| ATGAGAACTTCCGGAGAATT+GGG | 0.328328 | 3.1:+58114882 | MS.gene82552:CDS |
| GATGAGAACTTCCGGAGAAT+TGG | 0.331816 | 3.1:+58114881 | MS.gene82552:CDS |
| TTCCTTCTGTGGAGAAAGAT+TGG | 0.334000 | 3.1:+58115308 | MS.gene82552:CDS |
| TGGTTGAAGACTAAAGAATT+TGG | 0.339281 | 3.1:+58116214 | MS.gene82552:CDS |
| GAAGCCTTAACAGAAGTAAT+AGG | 0.340459 | 3.1:-58115346 | None:intergenic |
| AATCTTGCAACCAAAGGTTT+TGG | 0.345746 | 3.1:-58117891 | None:intergenic |
| AGATTCATTATGATAAGTTT+TGG | 0.346758 | 3.1:+58115233 | MS.gene82552:CDS |
| CACCAAACCACCATCGTCTT+TGG | 0.354002 | 3.1:-58116417 | None:intergenic |
| GAAAGTTACTTGAAATTTCT+GGG | 0.360353 | 3.1:+58115280 | MS.gene82552:CDS |
| GTTGCAAGATTTGTATAATC+AGG | 0.362930 | 3.1:+58117903 | MS.gene82552:CDS |
| TTCTGTTCATTCTCATCAGC+TGG | 0.374068 | 3.1:-58117826 | None:intergenic |
| AGCGGAGGAGTGTGTGGGAC+CGG | 0.387445 | 3.1:+58115117 | MS.gene82552:CDS |
| CCCGGCGTGGCTGCTCCGGC+AGG | 0.388387 | 3.1:-58114790 | None:intergenic |
| AGGAAAGAATATTGAGTGTA+AGG | 0.390011 | 3.1:+58117587 | MS.gene82552:CDS |
| TCTTCCTATTACTTCTGTTA+AGG | 0.396693 | 3.1:+58115342 | MS.gene82552:CDS |
| TTGGTGGATATTAGTGAATC+TGG | 0.397983 | 3.1:+58116434 | MS.gene82552:CDS |
| TAGACATGTTGCATGATCTT+AGG | 0.399007 | 3.1:-58116775 | None:intergenic |
| ATAAACAAACGAAAATTGAT+TGG | 0.399291 | 3.1:+58117715 | MS.gene82552:CDS |
| CATTGTCTTGCTGATGATAC+TGG | 0.406130 | 3.1:-58114215 | None:intergenic |
| TGATAGAAATGGAAATTATC+AGG | 0.406132 | 3.1:-58114560 | None:intergenic |
| TAAAGAAGGAAAAGAATTGC+TGG | 0.406283 | 3.1:-58116675 | None:intergenic |
| TTCTTTATTCTTGGCAAAGC+AGG | 0.407178 | 3.1:+58116691 | MS.gene82552:CDS |
| TGATGATAGAGTGTTGAAAT+TGG | 0.408070 | 3.1:+58117969 | MS.gene82552:CDS |
| GATTTGAGAGGTCCGCTAAA+TGG | 0.409385 | 3.1:+58116067 | MS.gene82552:CDS |
| AATCTCAGAGCTTCGAAAAC+CGG | 0.410413 | 3.1:-58114702 | None:intergenic |
| AATCGATTAGGGATTTCCTT+TGG | 0.411593 | 3.1:-58116935 | None:intergenic |
| GCGAAAACTCTACTAACAAC+CGG | 0.412020 | 3.1:-58114674 | None:intergenic |
| TATTCTTTCCTCAGAATAGT+TGG | 0.412079 | 3.1:-58117575 | None:intergenic |
| GGTCCGCTAAATGGTTCATT+TGG | 0.414541 | 3.1:+58116076 | MS.gene82552:CDS |
| GGGTTGCGTGTGATTTGTAT+TGG | 0.415204 | 3.1:+58115031 | MS.gene82552:CDS |
| TAAAGTTGAGTTGCAGCATT+TGG | 0.415715 | 3.1:+58114631 | MS.gene82552:CDS |
| CAAGATAAAAGTTGAACATA+TGG | 0.418254 | 3.1:+58117621 | MS.gene82552:CDS |
| AAGGTGTTGTTGAGGAATTA+GGG | 0.418580 | 3.1:+58115200 | MS.gene82552:CDS |
| GTGATACGGAGGTGGAGAAC+TGG | 0.420942 | 3.1:+58118091 | MS.gene82552:CDS |
| TGGTACGCCGCGTAATAACT+TGG | 0.424168 | 3.1:+58116454 | MS.gene82552:CDS |
| CCTGCCGGAGCAGCCACGCC+GGG | 0.425991 | 3.1:+58114790 | MS.gene82552:CDS |
| AGATTCTTGTTCGGAGTAAA+GGG | 0.426301 | 3.1:+58114906 | MS.gene82552:CDS |
| GGTTGCGTGTGATTTGTATT+GGG | 0.426999 | 3.1:+58115032 | MS.gene82552:CDS |
| GACCAAAGACGATGGTGGTT+TGG | 0.428172 | 3.1:+58116415 | MS.gene82552:intron |
| TTGTTTATGAAATTTAGATT+AGG | 0.428862 | 3.1:-58117700 | None:intergenic |
| TGTTAGCTACACCGATGCTT+TGG | 0.432897 | 3.1:-58117660 | None:intergenic |
| TCCATTGTATATTGAACTGC+AGG | 0.435701 | 3.1:-58116908 | None:intergenic |
| CAACTGAGAACCAAAACCTT+TGG | 0.435780 | 3.1:+58117881 | MS.gene82552:CDS |
| ATAACTTCAACAAAATTCTT+GGG | 0.438011 | 3.1:+58117998 | MS.gene82552:CDS |
| ATTGGTCCATGACTTCGGTT+TGG | 0.439047 | 3.1:-58118041 | None:intergenic |
| TCCTTCTGTGGAGAAAGATT+GGG | 0.439992 | 3.1:+58115309 | MS.gene82552:CDS |
| AAATGTGAACATGAAGTTCT+TGG | 0.443256 | 3.1:+58116130 | MS.gene82552:CDS |
| CTACTGCGTCGTTTAAAGCT+TGG | 0.445744 | 3.1:-58114256 | None:intergenic |
| TGCCGGAGCAGCCACGCCGG+GGG | 0.446913 | 3.1:+58114792 | MS.gene82552:CDS |
| CGTATGCAGCTGCAAGCAAT+TGG | 0.448193 | 3.1:-58118059 | None:intergenic |
| AACACTTGTCCTACTGTTGT+GGG | 0.450722 | 3.1:+58116518 | MS.gene82552:CDS |
| AGGATGTAGATGAGAACTTC+CGG | 0.455870 | 3.1:+58114873 | MS.gene82552:CDS |
| TCAAGGGAATCAAAATCATA+TGG | 0.457326 | 3.1:-58117949 | None:intergenic |
| GAATTCGCTGATGCAGAACT+TGG | 0.458181 | 3.1:-58116487 | None:intergenic |
| AGCACTCGATCTTTGCCTCT+CGG | 0.459304 | 3.1:+58114421 | MS.gene82552:CDS |
| AAGTTAGACGGGTATGGATC+AGG | 0.465175 | 3.1:-58116184 | None:intergenic |
| GAGATTCTTGTTCGGAGTAA+AGG | 0.465411 | 3.1:+58114905 | MS.gene82552:CDS |
| GAACAGAAACAAACAGATGA+TGG | 0.468165 | 3.1:+58117841 | MS.gene82552:CDS |
| GTTGCTGTTGATGATAGAAA+TGG | 0.470693 | 3.1:-58114571 | None:intergenic |
| CTGAATTACTGTATGGAAGC+CGG | 0.471612 | 3.1:+58117257 | MS.gene82552:CDS |
| TCTCTAGCTGAATTACTGTA+TGG | 0.471880 | 3.1:+58117250 | MS.gene82552:CDS |
| AGATTAAGCTTGCAATTCTC+CGG | 0.479607 | 3.1:+58114720 | MS.gene82552:CDS |
| ATTATTAAAACAATAGTTTG+TGG | 0.482556 | 3.1:+58117127 | MS.gene82552:CDS |
| GACATCGTTTGAACGCCAAC+AGG | 0.484414 | 3.1:-58116641 | None:intergenic |
| TTCCCATTTACTCGCAGATA+CGG | 0.488156 | 3.1:+58117756 | MS.gene82552:CDS |
| AGTTAAGCAGGATGAAGATT+GGG | 0.488340 | 3.1:-58117005 | None:intergenic |
| GTAACCACGGATCTCGGCTT+AGG | 0.488783 | 3.1:+58116848 | MS.gene82552:CDS |
| TCTATTGTGAACGATGATAG+TGG | 0.489016 | 3.1:+58115169 | MS.gene82552:CDS |
| GGAAGAGATGCGGAAGTGGC+CGG | 0.489057 | 3.1:-58114739 | None:intergenic |
| GATGGCAAGATGAAGCCATA+AGG | 0.489339 | 3.1:+58117101 | MS.gene82552:CDS |
| CTTGCTGATGATACTGGTGT+TGG | 0.489518 | 3.1:-58114209 | None:intergenic |
| GCCATAAGCGAATTCGAAAC+CGG | 0.490442 | 3.1:-58114500 | None:intergenic |
| ATTTCAACACTCTATCATCA+AGG | 0.490477 | 3.1:-58117966 | None:intergenic |
| GACTTCGGTTTGGATTTGTA+AGG | 0.491765 | 3.1:-58118031 | None:intergenic |
| CGATTAGGGATTTCCTTTGG+AGG | 0.492732 | 3.1:-58116932 | None:intergenic |
| ATTTAGCGGACCTCTCAAAT+CGG | 0.494117 | 3.1:-58116065 | None:intergenic |
| ACTCGCAGATACGGCTAAAA+GGG | 0.494908 | 3.1:+58117765 | MS.gene82552:CDS |
| CATTGAAAATGTTGATAAAG+CGG | 0.495371 | 3.1:+58117405 | MS.gene82552:CDS |
| AGCCGTATCTGCGAGTAAAT+GGG | 0.496780 | 3.1:-58117758 | None:intergenic |
| ACTCAATCTAAAACTATCCT+TGG | 0.497044 | 3.1:-58118231 | None:intergenic |
| GTAGGACAAGTGTTTGCCTT+GGG | 0.498588 | 3.1:-58116509 | None:intergenic |
| ACCATTGAGGTAAGTTAGAC+GGG | 0.498702 | 3.1:-58116195 | None:intergenic |
| TCTGGGTGGATTTCCTTCTG+TGG | 0.499664 | 3.1:+58115297 | MS.gene82552:CDS |
| TCTCTTCCGTCGTGGTCCAC+CGG | 0.500377 | 3.1:+58114754 | MS.gene82552:CDS |
| CAATTTATTGCTGGTAGGAA+AGG | 0.502155 | 3.1:-58116879 | None:intergenic |
| CTCTTTCGAAGGCGGTAAGA+TGG | 0.502545 | 3.1:+58117083 | MS.gene82552:CDS |
| GATTCATTTGTACCACTTGG+TGG | 0.502803 | 3.1:+58116025 | MS.gene82552:CDS |
| TTGTCTCAAGCCATCAAGAC+AGG | 0.505339 | 3.1:+58117448 | MS.gene82552:CDS |
| CATATCAGAGACCAAGGTCC+AGG | 0.505539 | 3.1:+58115374 | MS.gene82552:CDS |
| GAAGATTCAAATCTAAAAGC+CGG | 0.505636 | 3.1:-58117804 | None:intergenic |
| TGAGGTAAGTTAGACGGGTA+TGG | 0.506595 | 3.1:-58116190 | None:intergenic |
| GGAAAGAATATTGAGTGTAA+GGG | 0.506915 | 3.1:+58117588 | MS.gene82552:CDS |
| ATATTGAGTGTAAGGGGCAG+AGG | 0.508668 | 3.1:+58117595 | MS.gene82552:CDS |
| AAGTTAAGCAGGATGAAGAT+TGG | 0.509048 | 3.1:-58117006 | None:intergenic |
| GCAGTGGAGAAGCGGAGAGA+AGG | 0.509881 | 3.1:+58114986 | MS.gene82552:CDS |
| ATAATAGTCAAAAGTTAAGC+AGG | 0.510086 | 3.1:-58117017 | None:intergenic |
| TGAATTACTGTATGGAAGCC+GGG | 0.510674 | 3.1:+58117258 | MS.gene82552:CDS |
| ACCTGCCGGAGCAGCCACGC+CGG | 0.510681 | 3.1:+58114789 | MS.gene82552:CDS |
| CAATCTAAAACTATCCTTGG+TGG | 0.511122 | 3.1:-58118228 | None:intergenic |
| GGCGGCGATTAAACGATCTC+AGG | 0.513617 | 3.1:+58114520 | MS.gene82552:CDS |
| CGACGGAAGAGATGCGGAAG+TGG | 0.514717 | 3.1:-58114743 | None:intergenic |
| AATGCAAAAGATCTTGAGTC+AGG | 0.517636 | 3.1:+58116749 | MS.gene82552:CDS |
| GAGAAGCTTTACCGAGGCAG+TGG | 0.518722 | 3.1:+58114970 | MS.gene82552:CDS |
| TCTTTAGTCTTCAACCATTG+AGG | 0.520237 | 3.1:-58116208 | None:intergenic |
| GAAACGTTGTTATGCGAAGA+AGG | 0.521878 | 3.1:-58114461 | None:intergenic |
| CAAGAATCTCCCCAATTCTC+CGG | 0.522456 | 3.1:-58114892 | None:intergenic |
| GCCGGAGCAGCCACGCCGGG+GGG | 0.523102 | 3.1:+58114793 | MS.gene82552:CDS |
| TGCTTTGCCAAGAATAAAGA+AGG | 0.523195 | 3.1:-58116689 | None:intergenic |
| AACCATTGAGGTAAGTTAGA+CGG | 0.523839 | 3.1:-58116196 | None:intergenic |
| GAATTGGGGAGATTCTTGTT+CGG | 0.523960 | 3.1:+58114897 | MS.gene82552:CDS |
| AACGATCTCAGGCGAATCAA+CGG | 0.525143 | 3.1:+58114531 | MS.gene82552:CDS |
| CTGCCGGAGCAGCCACGCCG+GGG | 0.528037 | 3.1:+58114791 | MS.gene82552:CDS |
| ACTTCAGTAACCACGGATCT+CGG | 0.530831 | 3.1:+58116842 | MS.gene82552:CDS |
| ATGGATTCATTTGTACCACT+TGG | 0.532406 | 3.1:+58116022 | MS.gene82552:CDS |
| TTCCTCTGATCATGAACCAC+CGG | 0.533257 | 3.1:+58114481 | MS.gene82552:CDS |
| AAACACTTGTCCTACTGTTG+TGG | 0.533314 | 3.1:+58116517 | MS.gene82552:CDS |
| CCCCACGCTGATTTAACCCA+TGG | 0.534140 | 3.1:-58117171 | None:intergenic |
| TGTACACTTGAAGCTTGCTC+TGG | 0.535033 | 3.1:-58118201 | None:intergenic |
| TCTCCGCTTCTCCACTGCCT+CGG | 0.535312 | 3.1:-58114981 | None:intergenic |
| TCCCAATCTTTCTCCACAGA+AGG | 0.536779 | 3.1:-58115310 | None:intergenic |
| ATGGCAAGATGAAGCCATAA+GGG | 0.538048 | 3.1:+58117102 | MS.gene82552:CDS |
| GAAAGAATATTGAGTGTAAG+GGG | 0.538947 | 3.1:+58117589 | MS.gene82552:CDS |
| TATACAAATCTTGCAACCAA+AGG | 0.539912 | 3.1:-58117897 | None:intergenic |
| TTGAGATTGATGTATTCTCT+AGG | 0.542305 | 3.1:-58116608 | None:intergenic |
| GCGGAGGAGTGTGTGGGACC+GGG | 0.543340 | 3.1:+58115118 | MS.gene82552:CDS |
| CAAAGACGATGGTGGTTTGG+TGG | 0.544288 | 3.1:+58116418 | MS.gene82552:CDS |
| GCGTGTGATTTGTATTGGGA+AGG | 0.545422 | 3.1:+58115036 | MS.gene82552:CDS |
| ACCCGTCTAACTTACCTCAA+TGG | 0.547191 | 3.1:+58116194 | MS.gene82552:CDS |
| AGTAGGACAAGTGTTTGCCT+TGG | 0.548623 | 3.1:-58116510 | None:intergenic |
| AAGCAATTGGTCCATGACTT+CGG | 0.550343 | 3.1:-58118046 | None:intergenic |
| CTCAACTCTCATGCACCTGT+TGG | 0.550793 | 3.1:+58116626 | MS.gene82552:CDS |
| TAAATCAGCGTGGGGACAAG+TGG | 0.552622 | 3.1:+58117179 | MS.gene82552:CDS |
| TCCCACACACTCCTCCGCTA+TGG | 0.554008 | 3.1:-58115113 | None:intergenic |
| TTTGTCTGTTCTTGATGACC+CGG | 0.555553 | 3.1:+58114655 | MS.gene82552:CDS |
| TTGGATTTGTAAGGCACACT+CGG | 0.557236 | 3.1:-58118022 | None:intergenic |
| TGCCATAGCGGAGGAGTGTG+TGG | 0.559738 | 3.1:+58115111 | MS.gene82552:CDS |
| CGCAACCCGGCAAGTTCCAA+AGG | 0.560162 | 3.1:-58115016 | None:intergenic |
| ATTGGGAAGGAGTTAGAGAG+TGG | 0.560270 | 3.1:+58115049 | MS.gene82552:CDS |
| GGGCACATACAACATCAAAC+CGG | 0.565540 | 3.1:+58117785 | MS.gene82552:CDS |
| TGATACGGAGGTGGAGAACT+GGG | 0.566296 | 3.1:+58118092 | MS.gene82552:CDS |
| TCAATGAAAACCACAGACAA+TGG | 0.567044 | 3.1:-58117388 | None:intergenic |
| ACAAATCCAAACCGAAGTCA+TGG | 0.568051 | 3.1:+58118035 | MS.gene82552:CDS |
| GTTCAGCGAGTTCTCTGCGG+TGG | 0.570824 | 3.1:+58118114 | MS.gene82552:CDS |
| CTCGTTACCATCACCAACCC+CGG | 0.575271 | 3.1:-58114852 | None:intergenic |
| AAAATAGTTTGATGCAGACA+AGG | 0.576696 | 3.1:+58117545 | MS.gene82552:CDS |
| GGAGGATTGAAGAAGAAGGA+AGG | 0.578865 | 3.1:-58114343 | None:intergenic |
| TTTGTCAATTTATTGCTGGT+AGG | 0.579086 | 3.1:-58116884 | None:intergenic |
| AATACAAATCACACGCAACC+CGG | 0.579246 | 3.1:-58115029 | None:intergenic |
| CAACCAAATGAACCATTTAG+CGG | 0.582099 | 3.1:-58116079 | None:intergenic |
| CAATGAAATCCCACAACAGT+AGG | 0.584680 | 3.1:-58116527 | None:intergenic |
| TTTGTTGGACCCGATAGGCA+TGG | 0.587234 | 3.1:+58117208 | MS.gene82552:CDS |
| ATTTGATGAAGGTGTTGTTG+AGG | 0.587995 | 3.1:+58115192 | MS.gene82552:CDS |
| CTCAGACAGTGATACGGAGG+TGG | 0.588333 | 3.1:+58118083 | MS.gene82552:CDS |
| CTAAAACTATCCTTGGTGGA+AGG | 0.589007 | 3.1:-58118224 | None:intergenic |
| GATGATAGTGGATTTGATGA+AGG | 0.589290 | 3.1:+58115181 | MS.gene82552:CDS |
| TCACCATATTGATTATCATG+AGG | 0.589932 | 3.1:-58116106 | None:intergenic |
| TCGCGGAGGATTGAAGAAGA+AGG | 0.590157 | 3.1:-58114347 | None:intergenic |
| CTGTAAGCGTGGTGAGTAAG+CGG | 0.590848 | 3.1:-58114393 | None:intergenic |
| TTACCGAGGCAGTGGAGAAG+CGG | 0.592015 | 3.1:+58114978 | MS.gene82552:CDS |
| GACATCAGAAACCAAAGCAT+CGG | 0.598010 | 3.1:+58117649 | MS.gene82552:CDS |
| TCATCACAGTCCGATTTGAG+AGG | 0.598876 | 3.1:+58116055 | MS.gene82552:CDS |
| GAATGCAGTATGAAATTCAG+AGG | 0.599731 | 3.1:+58117322 | MS.gene82552:CDS |
| ACCATGGGTTAAATCAGCGT+GGG | 0.600324 | 3.1:+58117170 | MS.gene82552:CDS |
| ATATACAATGGAGCCTCCAA+AGG | 0.602874 | 3.1:+58116919 | MS.gene82552:CDS |
| CCACATGCTCCGAGAAGCAG+AGG | 0.605109 | 3.1:-58114935 | None:intergenic |
| GAGGATTGAAGAAGAAGGAA+GGG | 0.605389 | 3.1:-58114342 | None:intergenic |
| TGATATATATACCTGGACCT+TGG | 0.607527 | 3.1:-58115385 | None:intergenic |
| ACCTGCAGTTCAATATACAA+TGG | 0.608031 | 3.1:+58116907 | MS.gene82552:CDS |
| TTTCAACACTCTATCATCAA+GGG | 0.608260 | 3.1:-58117965 | None:intergenic |
| CCTCTGCTTCTCGGAGCATG+TGG | 0.611112 | 3.1:+58114935 | MS.gene82552:CDS |
| GCCATAGCGGAGGAGTGTGT+GGG | 0.615648 | 3.1:+58115112 | MS.gene82552:CDS |
| GGGAGACAGTTGACTACCAT+CGG | 0.617296 | 3.1:-58116810 | None:intergenic |
| CCAAAACTCACTATAACACC+CGG | 0.620447 | 3.1:-58115136 | None:intergenic |
| ATACGTCTCAGACAGTGATA+CGG | 0.621447 | 3.1:+58118077 | MS.gene82552:CDS |
| GGTTACTGAAGTCACAGATG+TGG | 0.622545 | 3.1:-58116831 | None:intergenic |
| GGAAACTTCCAACTATTCTG+AGG | 0.622677 | 3.1:+58117567 | MS.gene82552:CDS |
| CGGGGTTGGTGATGGTAACG+AGG | 0.622810 | 3.1:+58114853 | MS.gene82552:CDS |
| ACTCATCTACGAGAAAATCA+AGG | 0.623111 | 3.1:-58117354 | None:intergenic |
| AACCGGTGGTTCATGATCAG+AGG | 0.623728 | 3.1:-58114483 | None:intergenic |
| TGAGAACTTCCGGAGAATTG+GGG | 0.624093 | 3.1:+58114883 | MS.gene82552:CDS |
| CGAAAACTCTACTAACAACC+GGG | 0.624716 | 3.1:-58114673 | None:intergenic |
| ATCTGTGACTTCAGTAACCA+CGG | 0.626780 | 3.1:+58116835 | MS.gene82552:CDS |
| GACCATGGGTTAAATCAGCG+TGG | 0.632154 | 3.1:+58117169 | MS.gene82552:CDS |
| TCTGCATCAGCGAATTCCCA+AGG | 0.632871 | 3.1:+58116493 | MS.gene82552:CDS |
| GGACCACGACGGAAGAGATG+CGG | 0.635718 | 3.1:-58114749 | None:intergenic |
| CTGAATCATATCAGAGACCA+AGG | 0.639617 | 3.1:+58115368 | MS.gene82552:CDS |
| AACGAGAACATGCGTCGCGG+AGG | 0.644978 | 3.1:-58114361 | None:intergenic |
| GTTACTGAAGTCACAGATGT+GGG | 0.645484 | 3.1:-58116830 | None:intergenic |
| GCGCAGACCAAAGACGATGG+TGG | 0.648457 | 3.1:+58116410 | MS.gene82552:intron |
| GGTTTCGAATTCGCTTATGG+CGG | 0.649803 | 3.1:+58114502 | MS.gene82552:CDS |
| GTGTCCGCGTCGTTTAGCGA+CGG | 0.653795 | 3.1:-58114279 | None:intergenic |
| CTTCCGCATCTCTTCCGTCG+TGG | 0.654309 | 3.1:+58114746 | MS.gene82552:CDS |
| GCAGATTGCTGCCATAGCGG+AGG | 0.654506 | 3.1:+58115102 | MS.gene82552:CDS |
| GTTAGAGAGTGGTGACTGCG+AGG | 0.656028 | 3.1:+58115060 | MS.gene82552:CDS |
| AAATAGTTTGATGCAGACAA+GGG | 0.658235 | 3.1:+58117546 | MS.gene82552:CDS |
| TATACCTAAGCCGAGATCCG+TGG | 0.660039 | 3.1:-58116852 | None:intergenic |
| AATGCAGTATGAAATTCAGA+GGG | 0.664603 | 3.1:+58117323 | MS.gene82552:CDS |
| TCTAGTTCAAGTGTGTCCGA+TGG | 0.664640 | 3.1:+58116794 | MS.gene82552:CDS |
| AAGCAGGATGAAGATTGGGA+CGG | 0.667416 | 3.1:-58117001 | None:intergenic |
| AAGTTTCACAATAGAACTAG+CGG | 0.670901 | 3.1:-58118169 | None:intergenic |
| CTGCAAGAAACCATTGTCTG+TGG | 0.672802 | 3.1:+58117378 | MS.gene82552:CDS |
| TGGGTTCAGCGAGTTCTCTG+CGG | 0.688804 | 3.1:+58118111 | MS.gene82552:CDS |
| TGTTATGCGAAGAAGGTGAA+CGG | 0.688938 | 3.1:-58114454 | None:intergenic |
| AGAAGGAAGGGATAACAAAG+CGG | 0.697389 | 3.1:-58114330 | None:intergenic |
| CCATGGGTTAAATCAGCGTG+GGG | 0.698609 | 3.1:+58117171 | MS.gene82552:CDS |
| AAAGCAGATTGCTGCCATAG+CGG | 0.699527 | 3.1:+58115099 | MS.gene82552:CDS |
| TGCTCTGAGAAGCTTTACCG+AGG | 0.701654 | 3.1:+58114964 | MS.gene82552:CDS |
| AGTTACTTGAAATTTCTGGG+TGG | 0.702382 | 3.1:+58115283 | MS.gene82552:CDS |
| ATGTTGTCCAAGTTATTACG+CGG | 0.709217 | 3.1:-58116461 | None:intergenic |
| CGTCTCAGACAGTGATACGG+AGG | 0.710020 | 3.1:+58118080 | MS.gene82552:CDS |
| CAAGTGTACACCTTCCACCA+AGG | 0.712467 | 3.1:+58118214 | MS.gene82552:CDS |
| TCAGCGCAGACCAAAGACGA+TGG | 0.718112 | 3.1:+58116407 | MS.gene82552:intron |
| TCGAACGAGAACATGCGTCG+CGG | 0.722983 | 3.1:-58114364 | None:intergenic |
| AACGGTCAAGTGAAACCGAG+AGG | 0.724784 | 3.1:-58114436 | None:intergenic |
| ATAAGCGAATTCGAAACCGG+TGG | 0.727286 | 3.1:-58114497 | None:intergenic |
| GTAGCCGTCGCTAAACGACG+CGG | 0.743739 | 3.1:+58114275 | MS.gene82552:CDS |
| AGTGCTTTGAACTGTAAGCG+TGG | 0.753908 | 3.1:-58114404 | None:intergenic |
| AGAGAGTGGTGACTGCGAGG+TGG | 0.754731 | 3.1:+58115063 | MS.gene82552:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTTATGTGAAATTATATT+TGG | + | chr3.1:58115666-58115685 | MS.gene82552:intron | 10.0% |
| !! | AAAATTCATTTCTTTATCTT+TGG | + | chr3.1:58115512-58115531 | MS.gene82552:intron | 15.0% |
| !! | ACTATTAAAGTATAAATCAA+TGG | - | chr3.1:58116341-58116360 | None:intergenic | 15.0% |
| !! | ATTATTAAAACAATAGTTTG+TGG | + | chr3.1:58117127-58117146 | MS.gene82552:CDS | 15.0% |
| !! | TTGTTTATGAAATTTAGATT+AGG | - | chr3.1:58117703-58117722 | None:intergenic | 15.0% |
| !! | AATAACTTCAACAAAATTCT+TGG | + | chr3.1:58117997-58118016 | MS.gene82552:CDS | 20.0% |
| !! | AATTATTTGTATAAAAACCG+TGG | + | chr3.1:58116299-58116318 | MS.gene82552:intron | 20.0% |
| !! | ATAAACAAACGAAAATTGAT+TGG | + | chr3.1:58117715-58117734 | MS.gene82552:CDS | 20.0% |
| !! | ATAACTTCAACAAAATTCTT+GGG | + | chr3.1:58117998-58118017 | MS.gene82552:CDS | 20.0% |
| !! | TATGATATGATATATATACC+TGG | - | chr3.1:58115395-58115414 | None:intergenic | 20.0% |
| !! | TTAGTGATAATCATAGTAAT+TGG | - | chr3.1:58115895-58115914 | None:intergenic | 20.0% |
| !! | TTTACACAAACAAAAAGAAA+AGG | - | chr3.1:58116369-58116388 | None:intergenic | 20.0% |
| !!! | AGATTCATTATGATAAGTTT+TGG | + | chr3.1:58115233-58115252 | MS.gene82552:CDS | 20.0% |
| !!! | ATCTTATTTGTATCATATGT+TGG | + | chr3.1:58115611-58115630 | MS.gene82552:intron | 20.0% |
| ! | ATAATAGTCAAAAGTTAAGC+AGG | - | chr3.1:58117020-58117039 | None:intergenic | 25.0% |
| ! | ATTTACTTCAAGCTTAAGTT+TGG | + | chr3.1:58116955-58116974 | MS.gene82552:CDS | 25.0% |
| ! | CAAGATAAAAGTTGAACATA+TGG | + | chr3.1:58117621-58117640 | MS.gene82552:CDS | 25.0% |
| ! | GAAAGTTACTTGAAATTTCT+GGG | + | chr3.1:58115280-58115299 | MS.gene82552:CDS | 25.0% |
| ! | TGAAAGTTACTTGAAATTTC+TGG | + | chr3.1:58115279-58115298 | MS.gene82552:CDS | 25.0% |
| ! | TGATAGAAATGGAAATTATC+AGG | - | chr3.1:58114563-58114582 | None:intergenic | 25.0% |
| ! | TTTCCTCATGATAATCAATA+TGG | + | chr3.1:58116103-58116122 | MS.gene82552:CDS | 25.0% |
| !! | AAGAGCTTCAAAAAGAATTT+TGG | - | chr3.1:58117068-58117087 | None:intergenic | 25.0% |
| !! | AGAGCTTCAAAAAGAATTTT+GGG | - | chr3.1:58117067-58117086 | None:intergenic | 25.0% |
| !! | CATTGAAAATGTTGATAAAG+CGG | + | chr3.1:58117405-58117424 | MS.gene82552:CDS | 25.0% |
| !! | TAAAATATAATAAAGGGCAC+AGG | - | chr3.1:58115558-58115577 | None:intergenic | 25.0% |
| !! | TGCTTCAAATGAAAGATTTT+CGG | + | chr3.1:58116153-58116172 | MS.gene82552:CDS | 25.0% |
| !! | TTCTTTTCCTTCTTTATTCT+TGG | + | chr3.1:58116682-58116701 | MS.gene82552:CDS | 25.0% |
| !!! | TCATTATGATAAGTTTTGGT+TGG | + | chr3.1:58115237-58115256 | MS.gene82552:CDS | 25.0% |
| !!! | TGTTTTAATAATAGCCCTTA+TGG | - | chr3.1:58117119-58117138 | None:intergenic | 25.0% |
| !!! | TTTTTTGTTGTACAGCTTAA+TGG | + | chr3.1:58116003-58116022 | MS.gene82552:intron | 25.0% |
| AAAATAGTTTGATGCAGACA+AGG | + | chr3.1:58117545-58117564 | MS.gene82552:CDS | 30.0% | |
| AAATAGTTTGATGCAGACAA+GGG | + | chr3.1:58117546-58117565 | MS.gene82552:CDS | 30.0% | |
| AAATGTGAACATGAAGTTCT+TGG | + | chr3.1:58116130-58116149 | MS.gene82552:CDS | 30.0% | |
| AAGCTTGAAGTAAATCGATT+AGG | - | chr3.1:58116950-58116969 | None:intergenic | 30.0% | |
| AAGTTTCACAATAGAACTAG+CGG | - | chr3.1:58118172-58118191 | None:intergenic | 30.0% | |
| AATGCAGTATGAAATTCAGA+GGG | + | chr3.1:58117323-58117342 | MS.gene82552:CDS | 30.0% | |
| ACTGCATTCATTCATTTCTT+TGG | - | chr3.1:58117311-58117330 | None:intergenic | 30.0% | |
| AGCTTGAAGTAAATCGATTA+GGG | - | chr3.1:58116949-58116968 | None:intergenic | 30.0% | |
| AGGAAAGAATATTGAGTGTA+AGG | + | chr3.1:58117587-58117606 | MS.gene82552:CDS | 30.0% | |
| ATTTCAACACTCTATCATCA+AGG | - | chr3.1:58117969-58117988 | None:intergenic | 30.0% | |
| CAAGTTGCAAAAACAAAGTT+TGG | - | chr3.1:58115736-58115755 | None:intergenic | 30.0% | |
| GAAAGAATATTGAGTGTAAG+GGG | + | chr3.1:58117589-58117608 | MS.gene82552:CDS | 30.0% | |
| GAAGATTCAAATCTAAAAGC+CGG | - | chr3.1:58117807-58117826 | None:intergenic | 30.0% | |
| GGAAAGAATATTGAGTGTAA+GGG | + | chr3.1:58117588-58117607 | MS.gene82552:CDS | 30.0% | |
| GTTCCGATTCCATTAAATTT+GGG | + | chr3.1:58115779-58115798 | MS.gene82552:intron | 30.0% | |
| GTTGCAAGATTTGTATAATC+AGG | + | chr3.1:58117903-58117922 | MS.gene82552:CDS | 30.0% | |
| TAAAGAAGGAAAAGAATTGC+TGG | - | chr3.1:58116678-58116697 | None:intergenic | 30.0% | |
| TATACAAATCTTGCAACCAA+AGG | - | chr3.1:58117900-58117919 | None:intergenic | 30.0% | |
| TATTCTTTCCTCAGAATAGT+TGG | - | chr3.1:58117578-58117597 | None:intergenic | 30.0% | |
| TCAAGGGAATCAAAATCATA+TGG | - | chr3.1:58117952-58117971 | None:intergenic | 30.0% | |
| TCTTCCTATTACTTCTGTTA+AGG | + | chr3.1:58115342-58115361 | MS.gene82552:CDS | 30.0% | |
| TGGAACATATCAGTTAGATT+TGG | - | chr3.1:58116728-58116747 | None:intergenic | 30.0% | |
| TGGTTGAAGACTAAAGAATT+TGG | + | chr3.1:58116214-58116233 | MS.gene82552:CDS | 30.0% | |
| TTGAGATTGATGTATTCTCT+AGG | - | chr3.1:58116611-58116630 | None:intergenic | 30.0% | |
| TTGTATCATATGTTGGATGT+TGG | + | chr3.1:58115618-58115637 | MS.gene82552:intron | 30.0% | |
| TTTCAACACTCTATCATCAA+GGG | - | chr3.1:58117968-58117987 | None:intergenic | 30.0% | |
| TTTGTCAATTTATTGCTGGT+AGG | - | chr3.1:58116887-58116906 | None:intergenic | 30.0% | |
| ! | AGCAAAAACATTGACTGTTA+AGG | + | chr3.1:58116240-58116259 | MS.gene82552:CDS | 30.0% |
| ! | TCACCATATTGATTATCATG+AGG | - | chr3.1:58116109-58116128 | None:intergenic | 30.0% |
| ! | TTGTCTGCATCAAACTATTT+TGG | - | chr3.1:58117546-58117565 | None:intergenic | 30.0% |
| ! | TTTCTTTTTACCATGCCTAT+CGG | - | chr3.1:58117221-58117240 | None:intergenic | 30.0% |
| !! | AGGTTTTGTCAATTTATTGC+TGG | - | chr3.1:58116891-58116910 | None:intergenic | 30.0% |
| !! | TGATGATAGAGTGTTGAAAT+TGG | + | chr3.1:58117969-58117988 | MS.gene82552:CDS | 30.0% |
| !!! | TATGATAAGTTTTGGTTGGT+GGG | + | chr3.1:58115241-58115260 | MS.gene82552:CDS | 30.0% |
| !!! | TTATGATAAGTTTTGGTTGG+TGG | + | chr3.1:58115240-58115259 | MS.gene82552:CDS | 30.0% |
| AACCATTGAGGTAAGTTAGA+CGG | - | chr3.1:58116199-58116218 | None:intergenic | 35.0% | |
| AAGTTAAGCAGGATGAAGAT+TGG | - | chr3.1:58117009-58117028 | None:intergenic | 35.0% | |
| AATCGATTAGGGATTTCCTT+TGG | - | chr3.1:58116938-58116957 | None:intergenic | 35.0% | |
| AATGCAAAAGATCTTGAGTC+AGG | + | chr3.1:58116749-58116768 | MS.gene82552:CDS | 35.0% | |
| ACCTGCAGTTCAATATACAA+TGG | + | chr3.1:58116907-58116926 | MS.gene82552:CDS | 35.0% | |
| ACTCATCTACGAGAAAATCA+AGG | - | chr3.1:58117357-58117376 | None:intergenic | 35.0% | |
| AGATTAAGCTTGCAATTCTC+CGG | + | chr3.1:58114720-58114739 | MS.gene82552:CDS | 35.0% | |
| AGATTCTTGTTCGGAGTAAA+GGG | + | chr3.1:58114906-58114925 | MS.gene82552:CDS | 35.0% | |
| AGTTAAGCAGGATGAAGATT+GGG | - | chr3.1:58117008-58117027 | None:intergenic | 35.0% | |
| ATGGATTCATTTGTACCACT+TGG | + | chr3.1:58116022-58116041 | MS.gene82552:CDS | 35.0% | |
| ATGTTGTCCAAGTTATTACG+CGG | - | chr3.1:58116464-58116483 | None:intergenic | 35.0% | |
| ATTGACTGTTAAGGTGTGTA+GGG | + | chr3.1:58116249-58116268 | MS.gene82552:intron | 35.0% | |
| CAACCAAATGAACCATTTAG+CGG | - | chr3.1:58116082-58116101 | None:intergenic | 35.0% | |
| CAATTTATTGCTGGTAGGAA+AGG | - | chr3.1:58116882-58116901 | None:intergenic | 35.0% | |
| CAGCCCAAATTTAATGGAAT+CGG | - | chr3.1:58115785-58115804 | None:intergenic | 35.0% | |
| CGTTCCGATTCCATTAAATT+TGG | + | chr3.1:58115778-58115797 | MS.gene82552:intron | 35.0% | |
| GAACAGAAACAAACAGATGA+TGG | + | chr3.1:58117841-58117860 | MS.gene82552:CDS | 35.0% | |
| GAAGCCTTAACAGAAGTAAT+AGG | - | chr3.1:58115349-58115368 | None:intergenic | 35.0% | |
| GAATGCAGTATGAAATTCAG+AGG | + | chr3.1:58117322-58117341 | MS.gene82552:CDS | 35.0% | |
| GTTTGGATGAAGAGATTATC+AGG | + | chr3.1:58116972-58116991 | MS.gene82552:CDS | 35.0% | |
| TAGACATGTTGCATGATCTT+AGG | - | chr3.1:58116778-58116797 | None:intergenic | 35.0% | |
| TCAATGAAAACCACAGACAA+TGG | - | chr3.1:58117391-58117410 | None:intergenic | 35.0% | |
| TCCATTGTATATTGAACTGC+AGG | - | chr3.1:58116911-58116930 | None:intergenic | 35.0% | |
| TCTATTGTGAACGATGATAG+TGG | + | chr3.1:58115169-58115188 | MS.gene82552:CDS | 35.0% | |
| TCTCTAGCTGAATTACTGTA+TGG | + | chr3.1:58117250-58117269 | MS.gene82552:CDS | 35.0% | |
| TGAAAGAAGAACCATTAGAG+AGG | - | chr3.1:58115711-58115730 | None:intergenic | 35.0% | |
| TGATATATATACCTGGACCT+TGG | - | chr3.1:58115388-58115407 | None:intergenic | 35.0% | |
| TGCGCTGAATGAAAGAAAAA+TGG | - | chr3.1:58116395-58116414 | None:intergenic | 35.0% | |
| TGCTTTGCCAAGAATAAAGA+AGG | - | chr3.1:58116692-58116711 | None:intergenic | 35.0% | |
| TTCTTTATTCTTGGCAAAGC+AGG | + | chr3.1:58116691-58116710 | MS.gene82552:CDS | 35.0% | |
| ! | AATCTTGCAACCAAAGGTTT+TGG | - | chr3.1:58117894-58117913 | None:intergenic | 35.0% |
| ! | ACTCAAGATCTTTTGCATTC+TGG | - | chr3.1:58116748-58116767 | None:intergenic | 35.0% |
| ! | AGTTACTTGAAATTTCTGGG+TGG | + | chr3.1:58115283-58115302 | MS.gene82552:CDS | 35.0% |
| ! | CAATCTAAAACTATCCTTGG+TGG | - | chr3.1:58118231-58118250 | None:intergenic | 35.0% |
| ! | CCACAAAAGTAAAGTTTTCC+CGG | - | chr3.1:58117279-58117298 | None:intergenic | 35.0% |
| ! | GACAAGTGGATGAATTTTGT+TGG | + | chr3.1:58117193-58117212 | MS.gene82552:CDS | 35.0% |
| ! | TAAAGTTGAGTTGCAGCATT+TGG | + | chr3.1:58114631-58114650 | MS.gene82552:CDS | 35.0% |
| ! | TCTTTAGTCTTCAACCATTG+AGG | - | chr3.1:58116211-58116230 | None:intergenic | 35.0% |
| ! | TGTGATTTTTCCTGTCTTGA+TGG | - | chr3.1:58117461-58117480 | None:intergenic | 35.0% |
| ! | TTCTTTTTACCATGCCTATC+GGG | - | chr3.1:58117220-58117239 | None:intergenic | 35.0% |
| ! | TTGGTGGATATTAGTGAATC+TGG | + | chr3.1:58116434-58116453 | MS.gene82552:CDS | 35.0% |
| ! | TTTAAAGCTTGGATTGCTTC+TGG | - | chr3.1:58114248-58114267 | None:intergenic | 35.0% |
| !! | AAGGTGTTGTTGAGGAATTA+GGG | + | chr3.1:58115200-58115219 | MS.gene82552:CDS | 35.0% |
| !! | ACAAAAAGTGCTAAAGACCA+TGG | + | chr3.1:58117154-58117173 | MS.gene82552:CDS | 35.0% |
| !! | ATTTGATGAAGGTGTTGTTG+AGG | + | chr3.1:58115192-58115211 | MS.gene82552:CDS | 35.0% |
| !! | CAAAAAGTGCTAAAGACCAT+GGG | + | chr3.1:58117155-58117174 | MS.gene82552:CDS | 35.0% |
| !! | GATGATAGTGGATTTGATGA+AGG | + | chr3.1:58115181-58115200 | MS.gene82552:CDS | 35.0% |
| !! | GTTGCTGTTGATGATAGAAA+TGG | - | chr3.1:58114574-58114593 | None:intergenic | 35.0% |
| !! | TTAGGCTTTCCGTTTTTATC+CGG | + | chr3.1:58114833-58114852 | MS.gene82552:CDS | 35.0% |
| !!! | TCTTTTTGAAGCTCTTTCGA+AGG | + | chr3.1:58117072-58117091 | MS.gene82552:CDS | 35.0% |
| AAACACTTGTCCTACTGTTG+TGG | + | chr3.1:58116517-58116536 | MS.gene82552:CDS | 40.0% | |
| AACACTTGTCCTACTGTTGT+GGG | + | chr3.1:58116518-58116537 | MS.gene82552:CDS | 40.0% | |
| AACATCGATAAGCTTGGAGA+TGG | + | chr3.1:58115853-58115872 | MS.gene82552:intron | 40.0% | |
| AAGCAATTGGTCCATGACTT+CGG | - | chr3.1:58118049-58118068 | None:intergenic | 40.0% | |
| AATACAAATCACACGCAACC+CGG | - | chr3.1:58115032-58115051 | None:intergenic | 40.0% | |
| AATCTCAGAGCTTCGAAAAC+CGG | - | chr3.1:58114705-58114724 | None:intergenic | 40.0% | |
| ACAAATCCAAACCGAAGTCA+TGG | + | chr3.1:58118035-58118054 | MS.gene82552:CDS | 40.0% | |
| ACCATTGAGGTAAGTTAGAC+GGG | - | chr3.1:58116198-58116217 | None:intergenic | 40.0% | |
| AGAAGGAAGGGATAACAAAG+CGG | - | chr3.1:58114333-58114352 | None:intergenic | 40.0% | |
| AGGATGTAGATGAGAACTTC+CGG | + | chr3.1:58114873-58114892 | MS.gene82552:CDS | 40.0% | |
| ATACGTCTCAGACAGTGATA+CGG | + | chr3.1:58118077-58118096 | MS.gene82552:CDS | 40.0% | |
| ATATACAATGGAGCCTCCAA+AGG | + | chr3.1:58116919-58116938 | MS.gene82552:CDS | 40.0% | |
| ATCTGTGACTTCAGTAACCA+CGG | + | chr3.1:58116835-58116854 | MS.gene82552:CDS | 40.0% | |
| ATGAGAACTTCCGGAGAATT+GGG | + | chr3.1:58114882-58114901 | MS.gene82552:CDS | 40.0% | |
| ATGGAATCGGAACGTGTAAA+CGG | - | chr3.1:58115772-58115791 | None:intergenic | 40.0% | |
| ATGGCAAGATGAAGCCATAA+GGG | + | chr3.1:58117102-58117121 | MS.gene82552:CDS | 40.0% | |
| CAACTGAGAACCAAAACCTT+TGG | + | chr3.1:58117881-58117900 | MS.gene82552:CDS | 40.0% | |
| CAATGAAATCCCACAACAGT+AGG | - | chr3.1:58116530-58116549 | None:intergenic | 40.0% | |
| CATTGTCTTGCTGATGATAC+TGG | - | chr3.1:58114218-58114237 | None:intergenic | 40.0% | |
| CCAAAACTCACTATAACACC+CGG | - | chr3.1:58115139-58115158 | None:intergenic | 40.0% | |
| CGAAAACTCTACTAACAACC+GGG | - | chr3.1:58114676-58114695 | None:intergenic | 40.0% | |
| CTAAAACTATCCTTGGTGGA+AGG | - | chr3.1:58118227-58118246 | None:intergenic | 40.0% | |
| CTGAATCATATCAGAGACCA+AGG | + | chr3.1:58115368-58115387 | MS.gene82552:CDS | 40.0% | |
| CTGAATTACTGTATGGAAGC+CGG | + | chr3.1:58117257-58117276 | MS.gene82552:CDS | 40.0% | |
| CTTGCTAACATCGATAAGCT+TGG | + | chr3.1:58115847-58115866 | MS.gene82552:intron | 40.0% | |
| GAAACGTTGTTATGCGAAGA+AGG | - | chr3.1:58114464-58114483 | None:intergenic | 40.0% | |
| GAATTGGGGAGATTCTTGTT+CGG | + | chr3.1:58114897-58114916 | MS.gene82552:CDS | 40.0% | |
| GACATCAGAAACCAAAGCAT+CGG | + | chr3.1:58117649-58117668 | MS.gene82552:CDS | 40.0% | |
| GAGATTCTTGTTCGGAGTAA+AGG | + | chr3.1:58114905-58114924 | MS.gene82552:CDS | 40.0% | |
| GAGGATTGAAGAAGAAGGAA+GGG | - | chr3.1:58114345-58114364 | None:intergenic | 40.0% | |
| GATGAAAAAAAGCCACCAAG+TGG | - | chr3.1:58116040-58116059 | None:intergenic | 40.0% | |
| GATTCATTTGTACCACTTGG+TGG | + | chr3.1:58116025-58116044 | MS.gene82552:CDS | 40.0% | |
| GCGAAAACTCTACTAACAAC+CGG | - | chr3.1:58114677-58114696 | None:intergenic | 40.0% | |
| GGAAAAATCACAGACTCACA+TGG | + | chr3.1:58117469-58117488 | MS.gene82552:CDS | 40.0% | |
| GGAAACTTCCAACTATTCTG+AGG | + | chr3.1:58117567-58117586 | MS.gene82552:CDS | 40.0% | |
| GTTACTGAAGTCACAGATGT+GGG | - | chr3.1:58116833-58116852 | None:intergenic | 40.0% | |
| TAGCTGCAGCCCAAATTTAA+TGG | - | chr3.1:58115791-58115810 | None:intergenic | 40.0% | |
| TCCTTCTGTGGAGAAAGATT+GGG | + | chr3.1:58115309-58115328 | MS.gene82552:CDS | 40.0% | |
| TGAATTACTGTATGGAAGCC+GGG | + | chr3.1:58117258-58117277 | MS.gene82552:CDS | 40.0% | |
| TGTTATGCGAAGAAGGTGAA+CGG | - | chr3.1:58114457-58114476 | None:intergenic | 40.0% | |
| TTCCCATTTACTCGCAGATA+CGG | + | chr3.1:58117756-58117775 | MS.gene82552:CDS | 40.0% | |
| TTCCTTCTGTGGAGAAAGAT+TGG | + | chr3.1:58115308-58115327 | MS.gene82552:CDS | 40.0% | |
| TTCTGTTCATTCTCATCAGC+TGG | - | chr3.1:58117829-58117848 | None:intergenic | 40.0% | |
| TTGGATTTGTAAGGCACACT+CGG | - | chr3.1:58118025-58118044 | None:intergenic | 40.0% | |
| ! | ATTTAGCGGACCTCTCAAAT+CGG | - | chr3.1:58116068-58116087 | None:intergenic | 40.0% |
| ! | CATTGACTGTTAAGGTGTGT+AGG | + | chr3.1:58116248-58116267 | MS.gene82552:intron | 40.0% |
| ! | GAGAGAAGGAGTTTTACCTT+TGG | + | chr3.1:58115000-58115019 | MS.gene82552:CDS | 40.0% |
| ! | GGTTGCGTGTGATTTGTATT+GGG | + | chr3.1:58115032-58115051 | MS.gene82552:CDS | 40.0% |
| ! | TGAATTTTGTTGGACCCGAT+AGG | + | chr3.1:58117203-58117222 | MS.gene82552:CDS | 40.0% |
| ! | TTTGTCTGTTCTTGATGACC+CGG | + | chr3.1:58114655-58114674 | MS.gene82552:CDS | 40.0% |
| !! | CCGGGAAAACTTTACTTTTG+TGG | + | chr3.1:58117276-58117295 | MS.gene82552:CDS | 40.0% |
| !! | CGGGTGTTATAGTGAGTTTT+GGG | + | chr3.1:58115137-58115156 | MS.gene82552:CDS | 40.0% |
| !! | GAAGGTGTTGTTGAGGAATT+AGG | + | chr3.1:58115199-58115218 | MS.gene82552:CDS | 40.0% |
| !! | GACTTCGGTTTGGATTTGTA+AGG | - | chr3.1:58118034-58118053 | None:intergenic | 40.0% |
| !! | GGGTGTTATAGTGAGTTTTG+GGG | + | chr3.1:58115138-58115157 | MS.gene82552:CDS | 40.0% |
| !! | TAGGCTTTCCGTTTTTATCC+GGG | + | chr3.1:58114834-58114853 | MS.gene82552:CDS | 40.0% |
| !!! | GTTTTACCTTTGGAACTTGC+CGG | + | chr3.1:58115010-58115029 | MS.gene82552:CDS | 40.0% |
| !!! | TTTTACCTTTGGAACTTGCC+GGG | + | chr3.1:58115011-58115030 | MS.gene82552:CDS | 40.0% |
| !!! | TTTTGAAGCTCTTTCGAAGG+CGG | + | chr3.1:58117075-58117094 | MS.gene82552:CDS | 40.0% |
| AAAGCAGATTGCTGCCATAG+CGG | + | chr3.1:58115099-58115118 | MS.gene82552:CDS | 45.0% | |
| AACGATCTCAGGCGAATCAA+CGG | + | chr3.1:58114531-58114550 | MS.gene82552:CDS | 45.0% | |
| AAGCAGGATGAAGATTGGGA+CGG | - | chr3.1:58117004-58117023 | None:intergenic | 45.0% | |
| AAGTTAGACGGGTATGGATC+AGG | - | chr3.1:58116187-58116206 | None:intergenic | 45.0% | |
| ACCCGTCTAACTTACCTCAA+TGG | + | chr3.1:58116194-58116213 | MS.gene82552:CDS | 45.0% | |
| ACTCGCAGATACGGCTAAAA+GGG | + | chr3.1:58117765-58117784 | MS.gene82552:CDS | 45.0% | |
| ACTTCAGTAACCACGGATCT+CGG | + | chr3.1:58116842-58116861 | MS.gene82552:CDS | 45.0% | |
| AGCCGTATCTGCGAGTAAAT+GGG | - | chr3.1:58117761-58117780 | None:intergenic | 45.0% | |
| AGGTTACACAGAAAAACCGG+TGG | - | chr3.1:58114773-58114792 | None:intergenic | 45.0% | |
| AGTAGGACAAGTGTTTGCCT+TGG | - | chr3.1:58116513-58116532 | None:intergenic | 45.0% | |
| ATAAGCGAATTCGAAACCGG+TGG | - | chr3.1:58114500-58114519 | None:intergenic | 45.0% | |
| ATATTGAGTGTAAGGGGCAG+AGG | + | chr3.1:58117595-58117614 | MS.gene82552:CDS | 45.0% | |
| ATTGGGAAGGAGTTAGAGAG+TGG | + | chr3.1:58115049-58115068 | MS.gene82552:CDS | 45.0% | |
| ATTGGTCCATGACTTCGGTT+TGG | - | chr3.1:58118044-58118063 | None:intergenic | 45.0% | |
| CAAGAATCTCCCCAATTCTC+CGG | - | chr3.1:58114895-58114914 | None:intergenic | 45.0% | |
| CGATTAGGGATTTCCTTTGG+AGG | - | chr3.1:58116935-58116954 | None:intergenic | 45.0% | |
| CTGCAAGAAACCATTGTCTG+TGG | + | chr3.1:58117378-58117397 | MS.gene82552:CDS | 45.0% | |
| CTTGCTGATGATACTGGTGT+TGG | - | chr3.1:58114212-58114231 | None:intergenic | 45.0% | |
| GAATTCGCTGATGCAGAACT+TGG | - | chr3.1:58116490-58116509 | None:intergenic | 45.0% | |
| GACAGATCATAGAGTTGCCA+CGG | - | chr3.1:58116319-58116338 | None:intergenic | 45.0% | |
| GATGAGAACTTCCGGAGAAT+TGG | + | chr3.1:58114881-58114900 | MS.gene82552:CDS | 45.0% | |
| GATGGCAAGATGAAGCCATA+AGG | + | chr3.1:58117101-58117120 | MS.gene82552:CDS | 45.0% | |
| GATTTGAGAGGTCCGCTAAA+TGG | + | chr3.1:58116067-58116086 | MS.gene82552:CDS | 45.0% | |
| GCCATAAGCGAATTCGAAAC+CGG | - | chr3.1:58114503-58114522 | None:intergenic | 45.0% | |
| GCTGGGTTTGGATTTGGATT+AGG | + | chr3.1:58114815-58114834 | MS.gene82552:CDS | 45.0% | |
| GGAGGATTGAAGAAGAAGGA+AGG | - | chr3.1:58114346-58114365 | None:intergenic | 45.0% | |
| GGCAGGTTACACAGAAAAAC+CGG | - | chr3.1:58114776-58114795 | None:intergenic | 45.0% | |
| GGGAAAAATCCTCTGCTTCT+CGG | + | chr3.1:58114926-58114945 | MS.gene82552:CDS | 45.0% | |
| GGGCACATACAACATCAAAC+CGG | + | chr3.1:58117785-58117804 | MS.gene82552:CDS | 45.0% | |
| GGTCCGCTAAATGGTTCATT+TGG | + | chr3.1:58116076-58116095 | MS.gene82552:CDS | 45.0% | |
| GGTTACTGAAGTCACAGATG+TGG | - | chr3.1:58116834-58116853 | None:intergenic | 45.0% | |
| GGTTTCGAATTCGCTTATGG+CGG | + | chr3.1:58114502-58114521 | MS.gene82552:CDS | 45.0% | |
| GTAGGACAAGTGTTTGCCTT+GGG | - | chr3.1:58116512-58116531 | None:intergenic | 45.0% | |
| TACTCGCAGATACGGCTAAA+AGG | + | chr3.1:58117764-58117783 | MS.gene82552:CDS | 45.0% | |
| TAGCCGTATCTGCGAGTAAA+TGG | - | chr3.1:58117762-58117781 | None:intergenic | 45.0% | |
| TCACCAACCCCGGATAAAAA+CGG | - | chr3.1:58114845-58114864 | None:intergenic | 45.0% | |
| TCCCAATCTTTCTCCACAGA+AGG | - | chr3.1:58115313-58115332 | None:intergenic | 45.0% | |
| TGAAGCAACAGCCTCTCTAA+TGG | + | chr3.1:58115697-58115716 | MS.gene82552:intron | 45.0% | |
| TGAGAACTTCCGGAGAATTG+GGG | + | chr3.1:58114883-58114902 | MS.gene82552:CDS | 45.0% | |
| TGAGGTAAGTTAGACGGGTA+TGG | - | chr3.1:58116193-58116212 | None:intergenic | 45.0% | |
| TGTTAGCTACACCGATGCTT+TGG | - | chr3.1:58117663-58117682 | None:intergenic | 45.0% | |
| TTCCTCTGATCATGAACCAC+CGG | + | chr3.1:58114481-58114500 | MS.gene82552:CDS | 45.0% | |
| TTGTCTCAAGCCATCAAGAC+AGG | + | chr3.1:58117448-58117467 | MS.gene82552:CDS | 45.0% | |
| ! | ACCATGGGTTAAATCAGCGT+GGG | + | chr3.1:58117170-58117189 | MS.gene82552:CDS | 45.0% |
| ! | ACCGGTTTCGAATTCGCTTA+TGG | + | chr3.1:58114499-58114518 | MS.gene82552:CDS | 45.0% |
| ! | AGTAGAGTTTTCGCTGAAGC+CGG | + | chr3.1:58114683-58114702 | MS.gene82552:CDS | 45.0% |
| ! | AGTGCTTTGAACTGTAAGCG+TGG | - | chr3.1:58114407-58114426 | None:intergenic | 45.0% |
| ! | CTACTGCGTCGTTTAAAGCT+TGG | - | chr3.1:58114259-58114278 | None:intergenic | 45.0% |
| ! | GATTTTGCTGCTGTGGTTGT+CGG | - | chr3.1:58116576-58116595 | None:intergenic | 45.0% |
| ! | GCGTGTGATTTGTATTGGGA+AGG | + | chr3.1:58115036-58115055 | MS.gene82552:CDS | 45.0% |
| ! | GGGTTGCGTGTGATTTGTAT+TGG | + | chr3.1:58115031-58115050 | MS.gene82552:CDS | 45.0% |
| ! | GGTTTTTCTGTGTAACCTGC+CGG | + | chr3.1:58114775-58114794 | MS.gene82552:CDS | 45.0% |
| ! | TCATCACAGTCCGATTTGAG+AGG | + | chr3.1:58116055-58116074 | MS.gene82552:CDS | 45.0% |
| ! | TCTAGTTCAAGTGTGTCCGA+TGG | + | chr3.1:58116794-58116813 | MS.gene82552:CDS | 45.0% |
| ! | TGTCTACGATTTTGCTGCTG+TGG | - | chr3.1:58116583-58116602 | None:intergenic | 45.0% |
| !! | AGGCTTTCCGTTTTTATCCG+GGG | + | chr3.1:58114835-58114854 | MS.gene82552:CDS | 45.0% |
| !! | CCGGGTGTTATAGTGAGTTT+TGG | + | chr3.1:58115136-58115155 | MS.gene82552:CDS | 45.0% |
| !! | TTTCCGTTTTTATCCGGGGT+TGG | + | chr3.1:58114839-58114858 | MS.gene82552:CDS | 45.0% |
| !!! | TTTTTATCCGGGGTTGGTGA+TGG | + | chr3.1:58114845-58114864 | MS.gene82552:CDS | 45.0% |
| !! | ATACTATTAAAATATAATAA+AGG | - | chr3.1:58115565-58115584 | None:intergenic | 5.0% |
| !! | TACTATTAAAATATAATAAA+GGG | - | chr3.1:58115564-58115583 | None:intergenic | 5.0% |
| AACCGGTGGTTCATGATCAG+AGG | - | chr3.1:58114486-58114505 | None:intergenic | 50.0% | |
| AACGGTCAAGTGAAACCGAG+AGG | - | chr3.1:58114439-58114458 | None:intergenic | 50.0% | |
| AGCACTCGATCTTTGCCTCT+CGG | + | chr3.1:58114421-58114440 | MS.gene82552:CDS | 50.0% | |
| CAAGTGTACACCTTCCACCA+AGG | + | chr3.1:58118214-58118233 | MS.gene82552:CDS | 50.0% | |
| CACCAAACCACCATCGTCTT+TGG | - | chr3.1:58116420-58116439 | None:intergenic | 50.0% | |
| CATATCAGAGACCAAGGTCC+AGG | + | chr3.1:58115374-58115393 | MS.gene82552:CDS | 50.0% | |
| CGTATGCAGCTGCAAGCAAT+TGG | - | chr3.1:58118062-58118081 | None:intergenic | 50.0% | |
| CTCAACTCTCATGCACCTGT+TGG | + | chr3.1:58116626-58116645 | MS.gene82552:CDS | 50.0% | |
| CTCTTTCGAAGGCGGTAAGA+TGG | + | chr3.1:58117083-58117102 | MS.gene82552:CDS | 50.0% | |
| CTGTAAGCGTGGTGAGTAAG+CGG | - | chr3.1:58114396-58114415 | None:intergenic | 50.0% | |
| GACATCGTTTGAACGCCAAC+AGG | - | chr3.1:58116644-58116663 | None:intergenic | 50.0% | |
| GGGAGACAGTTGACTACCAT+CGG | - | chr3.1:58116813-58116832 | None:intergenic | 50.0% | |
| TAAATCAGCGTGGGGACAAG+TGG | + | chr3.1:58117179-58117198 | MS.gene82552:CDS | 50.0% | |
| TATACCTAAGCCGAGATCCG+TGG | - | chr3.1:58116855-58116874 | None:intergenic | 50.0% | |
| TCGCGGAGGATTGAAGAAGA+AGG | - | chr3.1:58114350-58114369 | None:intergenic | 50.0% | |
| TCTGCATCAGCGAATTCCCA+AGG | + | chr3.1:58116493-58116512 | MS.gene82552:CDS | 50.0% | |
| TGATACGGAGGTGGAGAACT+GGG | + | chr3.1:58118092-58118111 | MS.gene82552:CDS | 50.0% | |
| TGGTACGCCGCGTAATAACT+TGG | + | chr3.1:58116454-58116473 | MS.gene82552:CDS | 50.0% | |
| TTTGTTGGACCCGATAGGCA+TGG | + | chr3.1:58117208-58117227 | MS.gene82552:CDS | 50.0% | |
| ! | CAAAGACGATGGTGGTTTGG+TGG | + | chr3.1:58116418-58116437 | MS.gene82552:CDS | 50.0% |
| ! | CCATGGGTTAAATCAGCGTG+GGG | + | chr3.1:58117171-58117190 | MS.gene82552:CDS | 50.0% |
| ! | GACCAAAGACGATGGTGGTT+TGG | + | chr3.1:58116415-58116434 | MS.gene82552:intron | 50.0% |
| ! | GACCATGGGTTAAATCAGCG+TGG | + | chr3.1:58117169-58117188 | MS.gene82552:CDS | 50.0% |
| ! | TCTGGGTGGATTTCCTTCTG+TGG | + | chr3.1:58115297-58115316 | MS.gene82552:CDS | 50.0% |
| !! | TGCTCTGAGAAGCTTTACCG+AGG | + | chr3.1:58114964-58114983 | MS.gene82552:CDS | 50.0% |
| CGTCTCAGACAGTGATACGG+AGG | + | chr3.1:58118080-58118099 | MS.gene82552:CDS | 55.0% | |
| CTCAGACAGTGATACGGAGG+TGG | + | chr3.1:58118083-58118102 | MS.gene82552:CDS | 55.0% | |
| CTCGTTACCATCACCAACCC+CGG | - | chr3.1:58114855-58114874 | None:intergenic | 55.0% | |
| GAAAAACCGGTGGACCACGA+CGG | - | chr3.1:58114763-58114782 | None:intergenic | 55.0% | |
| GAGAAGCTTTACCGAGGCAG+TGG | + | chr3.1:58114970-58114989 | MS.gene82552:CDS | 55.0% | |
| GGCGGCGATTAAACGATCTC+AGG | + | chr3.1:58114520-58114539 | MS.gene82552:CDS | 55.0% | |
| GTAACCACGGATCTCGGCTT+AGG | + | chr3.1:58116848-58116867 | MS.gene82552:CDS | 55.0% | |
| GTGATACGGAGGTGGAGAAC+TGG | + | chr3.1:58118091-58118110 | MS.gene82552:CDS | 55.0% | |
| GTTAGAGAGTGGTGACTGCG+AGG | + | chr3.1:58115060-58115079 | MS.gene82552:CDS | 55.0% | |
| TCAGCGCAGACCAAAGACGA+TGG | + | chr3.1:58116407-58116426 | MS.gene82552:intron | 55.0% | |
| TCGAACGAGAACATGCGTCG+CGG | - | chr3.1:58114367-58114386 | None:intergenic | 55.0% | |
| TGGGTTCAGCGAGTTCTCTG+CGG | + | chr3.1:58118111-58118130 | MS.gene82552:CDS | 55.0% | |
| TTACCGAGGCAGTGGAGAAG+CGG | + | chr3.1:58114978-58114997 | MS.gene82552:CDS | 55.0% | |
| !! | CCCCACGCTGATTTAACCCA+TGG | - | chr3.1:58117174-58117193 | None:intergenic | 55.0% |
| AACGAGAACATGCGTCGCGG+AGG | - | chr3.1:58114364-58114383 | None:intergenic | 60.0% | |
| AGAGAGTGGTGACTGCGAGG+TGG | + | chr3.1:58115063-58115082 | MS.gene82552:CDS | 60.0% | |
| CAAATCCAAACCCAGCCCCC+CGG | - | chr3.1:58114811-58114830 | None:intergenic | 60.0% | |
| CCACATGCTCCGAGAAGCAG+AGG | - | chr3.1:58114938-58114957 | None:intergenic | 60.0% | |
| CCTCTGCTTCTCGGAGCATG+TGG | + | chr3.1:58114935-58114954 | MS.gene82552:CDS | 60.0% | |
| CGACGGAAGAGATGCGGAAG+TGG | - | chr3.1:58114746-58114765 | None:intergenic | 60.0% | |
| CGCAACCCGGCAAGTTCCAA+AGG | - | chr3.1:58115019-58115038 | None:intergenic | 60.0% | |
| CTTCCGCATCTCTTCCGTCG+TGG | + | chr3.1:58114746-58114765 | MS.gene82552:CDS | 60.0% | |
| GCAGATTGCTGCCATAGCGG+AGG | + | chr3.1:58115102-58115121 | MS.gene82552:CDS | 60.0% | |
| GCAGTGGAGAAGCGGAGAGA+AGG | + | chr3.1:58114986-58115005 | MS.gene82552:CDS | 60.0% | |
| GCGCAGACCAAAGACGATGG+TGG | + | chr3.1:58116410-58116429 | MS.gene82552:intron | 60.0% | |
| GGAAGAGATGCGGAAGTGGC+CGG | - | chr3.1:58114742-58114761 | None:intergenic | 60.0% | |
| GGACCACGACGGAAGAGATG+CGG | - | chr3.1:58114752-58114771 | None:intergenic | 60.0% | |
| GTAGCCGTCGCTAAACGACG+CGG | + | chr3.1:58114275-58114294 | MS.gene82552:CDS | 60.0% | |
| GTGTCCGCGTCGTTTAGCGA+CGG | - | chr3.1:58114282-58114301 | None:intergenic | 60.0% | |
| GTTCAGCGAGTTCTCTGCGG+TGG | + | chr3.1:58118114-58118133 | MS.gene82552:CDS | 60.0% | |
| TCCCACACACTCCTCCGCTA+TGG | - | chr3.1:58115116-58115135 | None:intergenic | 60.0% | |
| TCTCCGCTTCTCCACTGCCT+CGG | - | chr3.1:58114984-58115003 | None:intergenic | 60.0% | |
| TCTCTTCCGTCGTGGTCCAC+CGG | + | chr3.1:58114754-58114773 | MS.gene82552:CDS | 60.0% | |
| ! | GCCATAGCGGAGGAGTGTGT+GGG | + | chr3.1:58115112-58115131 | MS.gene82552:CDS | 60.0% |
| ! | TGCCATAGCGGAGGAGTGTG+TGG | + | chr3.1:58115111-58115130 | MS.gene82552:CDS | 60.0% |
| !! | CGGGGTTGGTGATGGTAACG+AGG | + | chr3.1:58114853-58114872 | MS.gene82552:CDS | 60.0% |
| CGGGGGGCTGGGTTTGGATT+TGG | + | chr3.1:58114809-58114828 | MS.gene82552:CDS | 65.0% | |
| ! | AGCGGAGGAGTGTGTGGGAC+CGG | + | chr3.1:58115117-58115136 | MS.gene82552:CDS | 65.0% |
| ! | GCGGAGGAGTGTGTGGGACC+GGG | + | chr3.1:58115118-58115137 | MS.gene82552:CDS | 70.0% |
| ACCTGCCGGAGCAGCCACGC+CGG | + | chr3.1:58114789-58114808 | MS.gene82552:CDS | 75.0% | |
| ! | AGCAGCCACGCCGGGGGGCT+GGG | + | chr3.1:58114798-58114817 | MS.gene82552:CDS | 80.0% |
| ! | CCAAACCCAGCCCCCCGGCG+TGG | - | chr3.1:58114806-58114825 | None:intergenic | 80.0% |
| ! | CCACGCCGGGGGGCTGGGTT+TGG | + | chr3.1:58114803-58114822 | MS.gene82552:CDS | 80.0% |
| ! | CCTGCCGGAGCAGCCACGCC+GGG | + | chr3.1:58114790-58114809 | MS.gene82552:CDS | 80.0% |
| ! | CTGCCGGAGCAGCCACGCCG+GGG | + | chr3.1:58114791-58114810 | MS.gene82552:CDS | 80.0% |
| ! | TGCCGGAGCAGCCACGCCGG+GGG | + | chr3.1:58114792-58114811 | MS.gene82552:CDS | 80.0% |
| ! | CCCGGCGTGGCTGCTCCGGC+AGG | - | chr3.1:58114793-58114812 | None:intergenic | 85.0% |
| ! | GAGCAGCCACGCCGGGGGGC+TGG | + | chr3.1:58114797-58114816 | MS.gene82552:CDS | 85.0% |
| ! | GCCCCCCGGCGTGGCTGCTC+CGG | - | chr3.1:58114797-58114816 | None:intergenic | 85.0% |
| ! | GCCGGAGCAGCCACGCCGGG+GGG | + | chr3.1:58114793-58114812 | MS.gene82552:CDS | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 58114206 | 58118251 | 58114206 | ID=MS.gene82552 |
| chr3.1 | mRNA | 58114206 | 58118251 | 58114206 | ID=MS.gene82552.t1;Parent=MS.gene82552 |
| chr3.1 | exon | 58114206 | 58115395 | 58114206 | ID=MS.gene82552.t1.exon1;Parent=MS.gene82552.t1 |
| chr3.1 | CDS | 58114206 | 58115395 | 58114206 | ID=cds.MS.gene82552.t1;Parent=MS.gene82552.t1 |
| chr3.1 | exon | 58116018 | 58116261 | 58116018 | ID=MS.gene82552.t1.exon2;Parent=MS.gene82552.t1 |
| chr3.1 | CDS | 58116018 | 58116261 | 58116018 | ID=cds.MS.gene82552.t1;Parent=MS.gene82552.t1 |
| chr3.1 | exon | 58116416 | 58118251 | 58116416 | ID=MS.gene82552.t1.exon3;Parent=MS.gene82552.t1 |
| chr3.1 | CDS | 58116416 | 58118251 | 58116416 | ID=cds.MS.gene82552.t1;Parent=MS.gene82552.t1 |
| Gene Sequence |
| Protein sequence |
