AlfalfaGEDB | MS.gene054173

M. sativa cultivar XinJiangDaYe / MS.gene054173

KEGG: K03327
GO: GO:0003674 GO:0005215 GO:0005575 GO:0006810 GO:0008150 GO:0015291 GO:0015297 GO:0016020 GO:0022804 GO:0022857 GO:0042910 GO:0051179 GO:0051234 GO:0055085 GO:0110165
PFAM: PF01554.21

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene054173.t1	XP_013452178.1	95.5	376	17	0	1	376	88	463	4.90E-198	700.3

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene054173.t1	F4JH46	54.7	375	170	0	2	376	145	519	6.7e-119	428.7

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene054173.t1	A0A072U9V2	95.5	376	17	0	1	376	88	463	3.6e-198	700.3

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049681	MS.gene054173	0.811245	7.71E-51	-1.69E-46
MS.gene052011	MS.gene054173	-0.805479	1.31E-49	-1.69E-46
MS.gene052711	MS.gene054173	0.810812	9.57E-51	-1.69E-46
MS.gene054010	MS.gene054173	0.821181	4.63E-53	-1.69E-46
MS.gene054012	MS.gene054173	0.812727	3.67E-51	-1.69E-46
MS.gene054013	MS.gene054173	0.809721	1.65E-50	-1.69E-46
MS.gene054173	MS.gene054183	0.815924	7.20E-52	-1.69E-46
MS.gene054173	MS.gene055604	0.803924	2.76E-49	-1.69E-46
MS.gene054173	MS.gene056191	0.808586	2.88E-50	-1.69E-46
MS.gene054173	MS.gene057330	0.802398	5.72E-49	-1.69E-46
MS.gene054173	MS.gene057749	0.840871	6.70E-58	-1.69E-46
MS.gene054173	MS.gene057823	0.83051	2.82E-55	-1.69E-46
MS.gene054173	MS.gene057824	0.803115	4.07E-49	-1.69E-46
MS.gene054173	MS.gene057825	0.800415	1.46E-48	-1.69E-46
MS.gene054173	MS.gene057826	0.835519	1.60E-56	-1.69E-46
MS.gene054173	MS.gene059420	0.822483	2.31E-53	-1.69E-46
MS.gene054173	MS.gene061578	0.805602	1.23E-49	-1.69E-46
MS.gene054173	MS.gene064168	0.804121	2.52E-49	-1.69E-46
MS.gene054173	MS.gene064621	0.800253	1.57E-48	-1.69E-46
MS.gene054173	MS.gene068612	0.80949	1.84E-50	-1.69E-46
MS.gene054173	MS.gene069145	0.814253	1.69E-51	-1.69E-46
MS.gene054173	MS.gene071062	0.820205	7.76E-53	-1.69E-46
MS.gene054173	MS.gene072897	0.810321	1.22E-50	-1.69E-46
MS.gene054173	MS.gene07845	0.806758	7.04E-50	-1.69E-46
MS.gene054173	MS.gene08264	0.807732	4.38E-50	-1.69E-46
MS.gene054173	MS.gene09574	0.827514	1.50E-54	-1.69E-46
MS.gene054173	MS.gene24098	0.808116	3.63E-50	-1.69E-46
MS.gene054173	MS.gene28865	0.809141	2.19E-50	-1.69E-46
MS.gene054173	MS.gene32626	0.822852	1.90E-53	-1.69E-46
MS.gene054173	MS.gene34874	0.80086	1.18E-48	-1.69E-46
MS.gene054173	MS.gene35805	0.810983	8.79E-51	-1.69E-46
MS.gene054173	MS.gene37233	0.810471	1.13E-50	-1.69E-46
MS.gene054173	MS.gene42798	0.809572	1.77E-50	-1.69E-46
MS.gene054173	MS.gene43422	0.81162	6.39E-51	-1.69E-46
MS.gene054173	MS.gene43589	0.803398	3.55E-49	-1.69E-46
MS.gene054173	MS.gene44640	0.810724	1.00E-50	-1.69E-46
MS.gene054173	MS.gene44649	0.814407	1.57E-51	-1.69E-46
MS.gene054173	MS.gene44651	0.800648	1.31E-48	-1.69E-46
MS.gene054173	MS.gene46312	0.810722	1.00E-50	-1.69E-46
MS.gene054173	MS.gene51389	0.816639	4.98E-52	-1.69E-46
MS.gene054173	MS.gene60558	0.834017	3.82E-56	-1.69E-46
MS.gene054173	MS.gene60828	0.817859	2.65E-52	-1.69E-46
MS.gene054173	MS.gene62154	0.810312	1.23E-50	-1.69E-46
MS.gene054173	MS.gene62286	0.801294	9.63E-49	-1.69E-46
MS.gene054173	MS.gene66157	0.825067	5.74E-54	-1.69E-46
MS.gene054173	MS.gene67058	0.823122	1.64E-53	-1.69E-46
MS.gene054173	MS.gene68037	0.802161	6.40E-49	-1.69E-46
MS.gene054173	MS.gene68938	0.826237	3.03E-54	-1.69E-46
MS.gene054173	MS.gene72924	-0.801226	9.95E-49	-1.69E-46
MS.gene054173	MS.gene73228	0.819782	9.69E-53	-1.69E-46
MS.gene054173	MS.gene74992	0.806744	7.09E-50	-1.69E-46
MS.gene054173	MS.gene77302	0.822487	2.31E-53	-1.69E-46
MS.gene054173	MS.gene82044	0.804368	2.23E-49	-1.69E-46
MS.gene054173	MS.gene82552	0.803342	3.65E-49	-1.69E-46
MS.gene054173	MS.gene85276	-0.804453	2.14E-49	-1.69E-46
MS.gene054173	MS.gene85944	0.815937	7.15E-52	-1.69E-46
MS.gene054173	MS.gene87570	0.801035	1.09E-48	-1.69E-46
MS.gene054173	MS.gene89630	0.820299	7.38E-53	-1.69E-46
MS.gene054173	MS.gene91159	0.802572	5.26E-49	-1.69E-46
MS.gene054173	MS.gene92401	0.80971	1.65E-50	-1.69E-46
MS.gene054173	MS.gene92549	0.825123	5.57E-54	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene054173.t1	MTR_6g047640	95.479	376	17	0	1	376	88	463	0.0	700
MS.gene054173.t1	MTR_6g047640	90.691	376	16	1	1	376	88	444	0.0	674
MS.gene054173.t1	MTR_6g047610	87.234	376	48	0	1	376	87	462	0.0	668
MS.gene054173.t1	MTR_6g047590	82.713	376	65	0	1	376	87	462	0.0	609
MS.gene054173.t1	MTR_1g100180	53.600	375	174	0	2	376	101	475	4.29e-145	421
MS.gene054173.t1	MTR_5g033100	47.340	376	197	1	2	376	114	489	3.30e-116	347
MS.gene054173.t1	MTR_1g021740	45.213	376	205	1	2	376	93	468	5.85e-115	343
MS.gene054173.t1	MTR_8g069470	43.617	376	211	1	2	376	108	483	5.42e-114	342
MS.gene054173.t1	MTR_7g087410	44.000	375	209	1	3	376	1	375	8.73e-113	335
MS.gene054173.t1	MTR_7g087410	44.149	376	209	1	2	376	89	464	1.88e-112	337
MS.gene054173.t1	MTR_5g032720	43.236	377	212	2	2	376	94	470	8.76e-106	320
MS.gene054173.t1	MTR_7g087430	42.133	375	216	1	3	376	1	375	8.81e-106	317
MS.gene054173.t1	MTR_3g099700	44.828	377	206	2	2	376	104	480	1.22e-104	317
MS.gene054173.t1	MTR_7g087400	42.133	375	217	0	2	376	88	462	3.60e-104	315
MS.gene054173.t1	MTR_2g022980	41.114	377	220	1	2	376	106	482	1.28e-100	307
MS.gene054173.t1	MTR_6g027200	42.133	375	217	0	2	376	95	469	8.85e-98	300
MS.gene054173.t1	MTR_2g088400	41.379	377	219	1	2	376	110	486	4.33e-97	298
MS.gene054173.t1	MTR_4g048000	40.849	377	221	1	2	376	122	498	1.04e-96	298
MS.gene054173.t1	MTR_5g032750	41.379	377	219	2	2	376	94	470	1.58e-96	296
MS.gene054173.t1	MTR_6g027190	41.867	375	218	0	2	376	83	457	1.58e-96	296
MS.gene054173.t1	MTR_3g099720	38.830	376	229	1	2	376	99	474	4.53e-91	282
MS.gene054173.t1	MTR_5g090290	40.318	377	223	1	2	376	104	480	2.00e-90	283
MS.gene054173.t1	MTR_2g088400	41.954	348	200	1	2	347	110	457	1.39e-87	272
MS.gene054173.t1	MTR_8g063590	40.212	378	223	2	2	376	111	488	2.91e-85	268
MS.gene054173.t1	MTR_7g087370	37.067	375	207	1	2	376	88	433	3.01e-82	258
MS.gene054173.t1	MTR_6g081410	36.148	379	238	2	2	376	83	461	1.14e-74	239
MS.gene054173.t1	MTR_6g081780	35.884	379	239	2	2	376	83	461	3.70e-73	235
MS.gene054173.t1	MTR_5g087930	35.870	368	213	4	2	367	84	430	1.79e-71	231
MS.gene054173.t1	MTR_6g066380	35.620	379	240	2	2	376	85	463	3.85e-70	228
MS.gene054173.t1	MTR_2g078930	36.870	377	234	2	2	375	101	476	4.14e-69	225
MS.gene054173.t1	MTR_2g079020	35.809	377	238	2	2	375	95	470	3.78e-67	220
MS.gene054173.t1	MTR_8g106670	32.891	377	251	1	2	376	70	446	1.25e-66	218
MS.gene054173.t1	MTR_1g108810	33.422	377	249	1	2	376	92	468	4.80e-66	217
MS.gene054173.t1	MTR_6g081240	35.279	377	242	1	2	376	68	444	1.78e-65	214
MS.gene054173.t1	MTR_7g082810	32.626	377	252	1	2	376	78	454	1.96e-64	213
MS.gene054173.t1	MTR_6g081300	35.013	377	243	1	2	376	68	444	3.92e-63	209
MS.gene054173.t1	MTR_1g108840	34.840	376	243	1	2	375	99	474	4.53e-63	209
MS.gene054173.t1	MTR_6g081390	33.509	379	246	3	2	376	71	447	1.56e-61	205
MS.gene054173.t1	MTR_1g108990	34.127	378	247	1	1	376	82	459	1.91e-61	205
MS.gene054173.t1	MTR_2g078960	36.340	377	236	2	2	375	91	466	5.17e-61	204
MS.gene054173.t1	MTR_2g078970	34.748	377	242	2	2	375	89	464	1.53e-60	203
MS.gene054173.t1	MTR_6g081810	32.533	375	229	2	2	376	85	435	3.11e-60	201
MS.gene054173.t1	MTR_6g081400	32.095	377	254	1	2	376	74	450	2.56e-59	199
MS.gene054173.t1	MTR_7g082800	33.509	379	244	3	3	376	1	376	1.00e-58	196
MS.gene054173.t1	MTR_1g109060	33.862	378	248	1	1	376	81	458	4.12e-58	196
MS.gene054173.t1	MTR_1g109060	33.862	378	248	1	1	376	81	458	5.57e-58	196
MS.gene054173.t1	MTR_6g004220	31.217	378	256	2	2	376	82	458	7.38e-58	196
MS.gene054173.t1	MTR_6g004220	31.217	378	256	2	2	376	89	465	8.39e-58	196
MS.gene054173.t1	MTR_5g090280	32.010	403	238	4	3	376	1	396	1.70e-57	193
MS.gene054173.t1	MTR_6g081310	32.391	389	248	3	2	376	55	442	2.17e-54	186
MS.gene054173.t1	MTR_5g010830	28.382	377	268	1	2	376	123	499	2.66e-48	171
MS.gene054173.t1	MTR_2g078990	32.313	294	195	2	85	375	1	293	5.63e-45	157
MS.gene054173.t1	MTR_1g101500	28.647	377	267	1	2	376	122	498	7.65e-43	157
MS.gene054173.t1	MTR_0039s0080	27.851	377	270	1	2	376	96	472	1.25e-42	156
MS.gene054173.t1	MTR_6g043810	27.649	387	267	4	2	376	81	466	1.53e-41	152
MS.gene054173.t1	MTR_6g043810	27.649	387	267	4	2	376	91	476	1.89e-41	152
MS.gene054173.t1	MTR_5g067460	26.738	374	272	1	2	373	113	486	1.64e-39	148
MS.gene054173.t1	MTR_3g111020	26.720	378	273	2	2	376	109	485	1.80e-38	145
MS.gene054173.t1	MTR_2g079030	34.872	195	127	0	181	375	319	513	1.07e-33	131
MS.gene054173.t1	MTR_6g088805	26.121	379	271	4	2	376	85	458	6.19e-33	129
MS.gene054173.t1	MTR_6g004220	28.065	310	219	2	2	308	89	397	1.16e-32	127
MS.gene054173.t1	MTR_4g027920	23.421	380	285	4	2	376	214	592	3.82e-28	116
MS.gene054173.t1	MTR_8g102430	25.464	377	259	4	2	376	81	437	1.68e-27	113
MS.gene054173.t1	MTR_2g435930	23.664	393	282	3	2	376	77	469	2.16e-26	110
MS.gene054173.t1	MTR_5g011540	27.937	383	263	4	2	376	101	478	2.35e-26	110
MS.gene054173.t1	MTR_6g004220	28.814	236	164	2	2	234	89	323	4.81e-23	98.6
MS.gene054173.t1	MTR_4g131290	44.262	61	34	0	14	74	11	71	1.12e-12	63.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene054173.t1	AT4G00350	54.667	375	170	0	2	376	145	519	5.49e-152	440
MS.gene054173.t1	AT4G25640	55.733	375	166	0	2	376	91	465	8.36e-139	404
MS.gene054173.t1	AT4G25640	55.733	375	166	0	2	376	91	465	2.52e-138	404
MS.gene054173.t1	AT4G25640	55.942	345	152	0	2	346	91	435	1.44e-129	380
MS.gene054173.t1	AT1G47530	46.933	375	198	1	3	376	1	375	2.83e-123	361
MS.gene054173.t1	AT1G47530	47.074	376	198	1	2	376	92	467	6.58e-123	363
MS.gene054173.t1	AT1G23300	46.011	376	202	1	2	376	101	476	3.10e-117	350
MS.gene054173.t1	AT3G26590	44.267	375	208	1	3	376	1	375	1.78e-113	337
MS.gene054173.t1	AT3G26590	44.415	376	208	1	2	376	102	477	6.21e-113	338
MS.gene054173.t1	AT5G38030	42.819	376	214	1	2	376	102	477	1.33e-112	338
MS.gene054173.t1	AT1G12950	43.617	376	211	1	2	376	124	499	4.01e-112	337
MS.gene054173.t1	AT1G61890	40.318	377	223	1	2	376	104	480	4.72e-105	318
MS.gene054173.t1	AT1G61890	40.318	377	223	1	2	376	104	480	5.22e-105	318
MS.gene054173.t1	AT1G11670	40.584	377	222	1	2	376	107	483	2.59e-104	317
MS.gene054173.t1	AT1G33110	42.819	376	214	1	2	376	93	468	2.14e-98	301
MS.gene054173.t1	AT1G33100	42.553	376	215	1	2	376	90	465	3.06e-98	301
MS.gene054173.t1	AT5G65380	42.175	377	216	2	2	376	94	470	4.08e-98	300
MS.gene054173.t1	AT3G21690	40.584	377	222	1	2	376	109	485	3.79e-97	298
MS.gene054173.t1	AT5G44050	42.175	377	216	2	2	376	97	473	6.55e-97	297
MS.gene054173.t1	AT1G33080	42.819	376	214	1	2	376	93	468	1.38e-96	296
MS.gene054173.t1	AT1G33080	42.819	376	214	1	2	376	93	468	1.69e-96	296
MS.gene054173.t1	AT4G21910	40.849	377	221	1	2	376	113	489	1.83e-96	296
MS.gene054173.t1	AT4G21910	40.849	377	221	1	2	376	113	489	1.83e-96	296
MS.gene054173.t1	AT4G21910	40.849	377	221	1	2	376	111	487	1.90e-96	296
MS.gene054173.t1	AT4G21910	40.849	377	221	1	2	376	111	487	1.90e-96	296
MS.gene054173.t1	AT4G21903	40.691	376	221	1	3	376	1	376	2.65e-95	290
MS.gene054173.t1	AT4G21903	40.849	377	221	1	2	376	109	485	8.64e-95	292
MS.gene054173.t1	AT4G21903	40.849	377	221	1	2	376	109	485	9.87e-95	292
MS.gene054173.t1	AT1G61890	40.805	348	204	1	2	347	104	451	7.75e-94	289
MS.gene054173.t1	AT3G59030	39.523	377	226	1	2	376	108	484	9.41e-93	287
MS.gene054173.t1	AT1G33090	40.160	376	224	1	2	376	93	468	4.32e-92	285
MS.gene054173.t1	AT5G10420	41.573	356	207	1	2	356	95	450	8.09e-86	268
MS.gene054173.t1	AT3G03620	38.298	376	231	1	2	376	94	469	3.79e-84	265
MS.gene054173.t1	AT3G03620	38.298	376	231	1	2	376	94	469	3.79e-84	265
MS.gene054173.t1	AT5G17700	37.766	376	233	1	2	376	91	466	8.51e-79	251
MS.gene054173.t1	AT5G17700	37.766	376	233	1	2	376	91	466	8.51e-79	251
MS.gene054173.t1	AT1G33110	41.158	311	182	1	2	311	93	403	3.10e-73	233
MS.gene054173.t1	AT5G52450	34.748	377	244	1	2	376	83	459	1.06e-64	214
MS.gene054173.t1	AT2G04070	32.011	378	255	1	1	376	83	460	2.53e-64	213
MS.gene054173.t1	AT2G04080	31.481	378	257	1	1	376	83	460	3.62e-64	212
MS.gene054173.t1	AT2G04080	31.481	378	257	1	1	376	83	460	4.05e-64	212
MS.gene054173.t1	AT2G04040	32.095	377	254	1	2	376	84	460	6.70e-64	211
MS.gene054173.t1	AT1G71140	32.540	378	253	1	1	376	82	459	2.82e-63	210
MS.gene054173.t1	AT3G59030	35.275	309	198	1	2	308	108	416	2.73e-62	206
MS.gene054173.t1	AT1G15170	34.218	377	246	1	2	376	91	467	4.82e-62	206
MS.gene054173.t1	AT1G73700	35.013	377	243	1	2	376	81	457	5.84e-62	206
MS.gene054173.t1	AT1G66760	32.727	385	243	4	1	376	84	461	6.51e-62	206
MS.gene054173.t1	AT1G66760	32.727	385	243	4	1	376	84	461	8.90e-62	206
MS.gene054173.t1	AT2G34360	33.862	378	240	5	2	376	84	454	2.35e-61	205
MS.gene054173.t1	AT1G15150	33.071	381	245	4	2	376	88	464	1.76e-60	202
MS.gene054173.t1	AT3G23560	32.804	378	248	2	2	375	96	471	4.41e-60	201
MS.gene054173.t1	AT3G23550	32.540	378	249	2	2	375	88	463	7.39e-60	201
MS.gene054173.t1	AT2G04050	32.011	378	255	1	1	376	83	460	4.48e-59	199
MS.gene054173.t1	AT1G15160	32.105	380	250	3	2	376	88	464	1.04e-57	195
MS.gene054173.t1	AT2G04100	31.217	378	258	1	1	376	86	463	2.20e-57	194
MS.gene054173.t1	AT2G04100	31.217	378	258	1	1	376	86	463	3.10e-57	194
MS.gene054173.t1	AT2G04090	31.217	378	258	1	1	376	86	463	1.61e-56	192
MS.gene054173.t1	AT1G15170	34.146	328	214	1	51	376	21	348	1.44e-55	186
MS.gene054173.t1	AT1G15180	33.069	378	249	2	2	376	92	468	1.50e-55	189
MS.gene054173.t1	AT5G17700	35.714	308	197	1	2	308	91	398	3.55e-55	186
MS.gene054173.t1	AT1G66780	29.288	379	264	2	1	376	91	468	7.44e-55	188
MS.gene054173.t1	AT1G15150	32.923	325	216	1	54	376	24	348	2.44e-54	183
MS.gene054173.t1	AT1G66760	31.532	333	226	1	46	376	1	333	1.01e-52	178
MS.gene054173.t1	AT1G64820	29.319	382	258	6	2	376	86	462	1.18e-50	177
MS.gene054173.t1	AT2G34360	29.708	377	215	2	2	376	84	412	6.67e-49	171
MS.gene054173.t1	AT3G23560	30.225	311	211	2	2	308	96	404	3.16e-38	142
MS.gene054173.t1	AT2G38510	24.339	378	283	2	2	376	63	440	1.00e-37	142
MS.gene054173.t1	AT4G29140	26.190	378	275	2	2	376	113	489	5.36e-37	140
MS.gene054173.t1	AT5G19700	26.525	377	275	1	2	376	93	469	8.18e-37	140
MS.gene054173.t1	AT1G66760	29.968	317	206	4	1	308	84	393	6.55e-36	135
MS.gene054173.t1	AT1G58340	25.134	374	278	1	2	373	115	488	6.50e-33	129
MS.gene054173.t1	AT1G71870	23.678	397	279	4	2	376	81	475	1.98e-32	127
MS.gene054173.t1	AT1G15180	29.927	274	188	2	38	308	8	280	6.00e-32	125
MS.gene054173.t1	AT4G23030	27.034	381	268	4	2	376	90	466	4.44e-30	120
MS.gene054173.t1	AT5G52050	23.238	383	286	1	2	376	92	474	2.22e-28	116
MS.gene054173.t1	AT4G22790	26.154	390	264	8	1	376	86	465	5.69e-25	106
MS.gene054173.t1	AT5G49130	24.623	398	270	9	2	376	83	473	4.87e-23	100
MS.gene054173.t1	AT2G04066	31.579	114	78	0	263	376	42	155	1.03e-19	85.9

Find 87 sgRNAs with CRISPR-Local

Find 175 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GATTGTCTTGGATGGCATTT+AGG	0.156838	6.1:-28511674	MS.gene054173:CDS
CGGCAATATTCTTCAGATTT+TGG	0.172137	6.1:-28509364	MS.gene054173:CDS
TATGGTTGGTTACATAAATT+TGG	0.175731	6.1:-28510194	MS.gene054173:CDS
CTTGGTTTCAACCAGCATTT+AGG	0.184697	6.1:-28510133	MS.gene054173:CDS
GGATGGCATTTAGGGAATTA+TGG	0.195593	6.1:-28511665	MS.gene054173:CDS
TGCCACCAAGAAAGAGTATT+TGG	0.220778	6.1:+28510560	None:intergenic
ACTCTAATCTTAAAACTTCT+TGG	0.251742	6.1:-28511996	MS.gene054173:CDS
ATTTATATAGGTGTGGTAAT+TGG	0.266990	6.1:-28510232	MS.gene054173:intron
ATCAAACATAATTACCTCTT+TGG	0.279611	6.1:+28509308	None:intergenic
GCTTGCATTATCCTTCTTGC+TGG	0.308510	6.1:-28511582	MS.gene054173:CDS
AGCATCCAAATACTCTTTCT+TGG	0.312229	6.1:-28510565	MS.gene054173:CDS
TGGAACATGATGCTGCTTCT+TGG	0.318875	6.1:-28511192	MS.gene054173:CDS
CTTCATCAGTGTATTTGATT+GGG	0.322121	6.1:-28511796	MS.gene054173:CDS
GATGGCATTTAGGGAATTAT+GGG	0.335429	6.1:-28511664	MS.gene054173:CDS
TCTTCATCAGTGTATTTGAT+TGG	0.340775	6.1:-28511797	MS.gene054173:CDS
AGTATTTCACAAACTATATC+AGG	0.341370	6.1:-28510387	MS.gene054173:intron
CTTTACCAATAGTGATGATA+TGG	0.342078	6.1:-28510463	MS.gene054173:CDS
TGTTCCAACCCTGAATATTA+AGG	0.345929	6.1:+28511208	None:intergenic
ATTGTCTTGGATGGCATTTA+GGG	0.356470	6.1:-28511673	MS.gene054173:CDS
AGAGTTGCATATAGATGAAT+TGG	0.356907	6.1:+28512014	None:intergenic
AGTGAATTAGCATACCTTCT+TGG	0.357398	6.1:-28510429	MS.gene054173:CDS
ACACTATGTGGCCAAGCTTA+TGG	0.367252	6.1:-28512116	MS.gene054173:CDS
GAATTTACTAAGCTAAGTTT+TGG	0.370077	6.1:-28511642	MS.gene054173:CDS
TTGGTTTCAACCAGCATTTA+GGG	0.380303	6.1:-28510132	MS.gene054173:CDS
TTGGCATGCTATTACATTGT+TGG	0.389393	6.1:-28510175	MS.gene054173:CDS
AAAGAGTATTTGGATGCTCT+TGG	0.420399	6.1:+28510570	None:intergenic
AAAGAGATAGCCGATCTTGC+CGG	0.440212	6.1:-28511966	MS.gene054173:CDS
TCATTATTTATAAGACCAAC+TGG	0.443175	6.1:-28509332	MS.gene054173:CDS
GTATTTGATTGGGGAATGAT+TGG	0.446046	6.1:-28511786	MS.gene054173:CDS
ATGTACCATATCATCACTAT+TGG	0.457968	6.1:+28510458	None:intergenic
GATAATCCTGTCATTGCTGT+TGG	0.465528	6.1:-28511552	MS.gene054173:CDS
GCAGGAAAATTTCAAAATGC+TGG	0.468904	6.1:-28512092	MS.gene054173:CDS
GTATTTATCTTCAAAGGTCA+TGG	0.471386	6.1:-28512070	MS.gene054173:CDS
ATCACTATTGGTAAAGATGA+AGG	0.476018	6.1:+28510470	None:intergenic
TACATTGTTGGACTCCCCAT+TGG	0.477043	6.1:-28510163	MS.gene054173:CDS
ATGTCTCAGTCTCTTCTCAT+TGG	0.479393	6.1:-28510537	MS.gene054173:CDS
TTATTCTTACCAAATTGAAA+AGG	0.488312	6.1:+28511527	None:intergenic
ATGCTGGTATTTATCTTCAA+AGG	0.493117	6.1:-28512076	MS.gene054173:CDS
TTGGAATAAGTTCAGCAGTA+AGG	0.499155	6.1:-28511173	MS.gene054173:intron
TGGATGTGGATGGCAAGTTA+TGG	0.499825	6.1:-28510212	MS.gene054173:CDS
CAACCAGCATTTAGGGGTCA+AGG	0.506365	6.1:-28510125	MS.gene054173:intron
TAATGATTTGTTTAGAACAA+TGG	0.510219	6.1:-28511611	MS.gene054173:CDS
AAACCAAGGAAAATTCCAAT+GGG	0.511526	6.1:+28510148	None:intergenic
AATTACCTCTTTGGTCCAGT+TGG	0.521889	6.1:+28509317	None:intergenic
AAGGATGGAATGGATTGTCT+TGG	0.523770	6.1:-28511686	MS.gene054173:CDS
TGTTATTATGTACATAGCAA+TGG	0.525747	6.1:-28511853	MS.gene054173:CDS
TGTGGCCAAGCTTATGGTGC+AGG	0.527728	6.1:-28512110	MS.gene054173:CDS
GCAATGGCAAGTAATATCTC+AGG	0.528753	6.1:-28511759	MS.gene054173:CDS
CATGTAGGGAATTAGTAGAA+TGG	0.533759	6.1:+28511935	None:intergenic
TTCATCAGTGTATTTGATTG+GGG	0.536727	6.1:-28511795	MS.gene054173:CDS
TAACCATTGTTATACCAAGA+AGG	0.539016	6.1:+28510415	None:intergenic
ATCCAAATACTCTTTCTTGG+TGG	0.540364	6.1:-28510562	MS.gene054173:CDS
CTTCACGAGAGGCAAATTGA+CGG	0.542556	6.1:+28511902	None:intergenic
ATAGGTGTGGTAATTGGATG+TGG	0.550106	6.1:-28510226	MS.gene054173:intron
TTGGCTTAGGGTCTATGGGG+AGG	0.550606	6.1:-28509396	MS.gene054173:intron
GGGAATGATTGGTTTAGCAA+TGG	0.557339	6.1:-28511775	MS.gene054173:CDS
GCCATTGGTTGGTGTAAAGA+AGG	0.560351	6.1:-28511705	MS.gene054173:CDS
GTTCGTGTCTCTAATACCCT+TGG	0.561196	6.1:-28510603	MS.gene054173:CDS
CTCTTGGATGTGACATGCCA+AGG	0.564469	6.1:+28510586	None:intergenic
TTAGCCTTAATATTCAGGGT+TGG	0.565916	6.1:-28511212	MS.gene054173:intron
AAGGAACCAACAGCAATGAC+AGG	0.568244	6.1:+28511546	None:intergenic
GAAACCAAGGAAAATTCCAA+TGG	0.569581	6.1:+28510147	None:intergenic
TGGTGTAAAGAAGGATGGAA+TGG	0.573821	6.1:-28511696	MS.gene054173:CDS
CTAAATGCTGGTTGAAACCA+AGG	0.575956	6.1:+28510134	None:intergenic
TTGGTTGGTGTAAAGAAGGA+TGG	0.577321	6.1:-28511701	MS.gene054173:CDS
GCATTGGTAATATATGCCAT+TGG	0.580938	6.1:-28511720	MS.gene054173:CDS
ATACCTTGACCCCTAAATGC+TGG	0.585343	6.1:+28510122	None:intergenic
TGTGGATGGCAAGTTATGGT+TGG	0.586186	6.1:-28510208	MS.gene054173:CDS
GACGGCGAAGGAAAACATGT+AGG	0.589287	6.1:+28511920	None:intergenic
ACGGCGAAGGAAAACATGTA+GGG	0.600604	6.1:+28511921	None:intergenic
TATCAAGATGACCAGCAAGA+AGG	0.603608	6.1:+28511571	None:intergenic
CATATAGATGAATTGGCAAG+AGG	0.604027	6.1:+28512021	None:intergenic
ATACCTTCTTGGTATAACAA+TGG	0.609585	6.1:-28510418	MS.gene054173:CDS
TGGTAATATATGCCATTGGT+TGG	0.614924	6.1:-28511716	MS.gene054173:CDS
TCCTTCTTTACACCAACCAA+TGG	0.619153	6.1:+28511704	None:intergenic
ATGGAATGGATTGTCTTGGA+TGG	0.624219	6.1:-28511682	MS.gene054173:CDS
AATGCACTAGCAACACTATG+TGG	0.632641	6.1:-28512128	MS.gene054173:CDS
TGGTTTCAACCAGCATTTAG+GGG	0.633107	6.1:-28510131	MS.gene054173:CDS
GTGTGGTAATTGGATGTGGA+TGG	0.640076	6.1:-28510222	MS.gene054173:CDS
GAGAGGCAAATTGACGGCGA+AGG	0.648088	6.1:+28511908	None:intergenic
TGGCAAGAGGAATATACAAG+TGG	0.656634	6.1:+28512034	None:intergenic
GCTTGAAGAAACTTCACGAG+AGG	0.663335	6.1:+28511891	None:intergenic
CTATGGGGAGGAACAATGTG+CGG	0.665533	6.1:-28509384	MS.gene054173:CDS
TGGCAAGTAATATCTCAGGA+TGG	0.670260	6.1:-28511755	MS.gene054173:CDS
TAAGACCAACTGGACCAAAG+AGG	0.670533	6.1:-28509322	None:intergenic
TCTTGGATGTGACATGCCAA+GGG	0.694020	6.1:+28510587	None:intergenic
AACCAAGGAAAATTCCAATG+GGG	0.752925	6.1:+28510149	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TTACAAATTTACATATTTTT+TGG	-	chr6.1:28512048-28512067	MS.gene054173:CDS	10.0%
!!!	TTCTTTTTAATTTTCTTTTT+TGG	+	chr6.1:28510754-28510773	None:intergenic	10.0%
!!	ATATGTAAATTTGTAAGAAA+AGG	+	chr6.1:28512044-28512063	None:intergenic	15.0%
!!!	TAAACATAAGAACTTTTTTT+TGG	+	chr6.1:28511936-28511955	None:intergenic	15.0%
!!!	TCATTTTCTCAAATTATTAT+CGG	-	chr6.1:28510068-28510087	MS.gene054173:intron	15.0%
!!	AACTTATCTACTATTAATGT+GGG	-	chr6.1:28511721-28511740	MS.gene054173:CDS	20.0%
!!	AAGGAAATCATAATATAAGT+TGG	+	chr6.1:28512025-28512044	None:intergenic	20.0%
!!	AATTAGAACATAACATTCTT+AGG	+	chr6.1:28511835-28511854	None:intergenic	20.0%
!!	AATTCAATGTAATTATGTGT+CGG	+	chr6.1:28510045-28510064	None:intergenic	20.0%
!!	ACATAATTTAGTGTAATCAT+AGG	-	chr6.1:28510496-28510515	MS.gene054173:CDS	20.0%
!!	ATGAGTTCAATATTACAATT+TGG	+	chr6.1:28511646-28511665	None:intergenic	20.0%
!!	TCACATAAAGTCAAATTTAT+AGG	+	chr6.1:28510366-28510385	None:intergenic	20.0%
!!	TGGTTATATGTCTATTTATT+AGG	-	chr6.1:28511417-28511436	MS.gene054173:intron	20.0%
!!	TTATTCTTACCAAATTGAAA+AGG	+	chr6.1:28509939-28509958	None:intergenic	20.0%
!!!	ACTTTTTTTTGGTAGATAAA+TGG	+	chr6.1:28511925-28511944	None:intergenic	20.0%
!!!	ATTTACATATTTTTTGGCTT+AGG	-	chr6.1:28512054-28512073	MS.gene054173:CDS	20.0%
!!!	ATTTTTAGCCTTAATATTCA+GGG	-	chr6.1:28510247-28510266	MS.gene054173:intron	20.0%
!!!	GGTTATAATTTATTTGCTTT+TGG	-	chr6.1:28511097-28511116	MS.gene054173:intron	20.0%
!!!	TAATGATTTGTTTAGAACAA+TGG	-	chr6.1:28509852-28509871	MS.gene054173:intron	20.0%
!!!	TATAAATTTGACTTTATGTG+AGG	-	chr6.1:28510365-28510384	MS.gene054173:intron	20.0%
!!!	TATTTTTAGCCTTAATATTC+AGG	-	chr6.1:28510246-28510265	MS.gene054173:intron	20.0%
!!!	TTTACATATTTTTTGGCTTA+GGG	-	chr6.1:28512055-28512074	MS.gene054173:CDS	20.0%
!	AAATCTGTTTCAGCTTAAAT+AGG	-	chr6.1:28511793-28511812	MS.gene054173:CDS	25.0%
!	AACTTCTTGGACATTTATAT+AGG	-	chr6.1:28511219-28511238	MS.gene054173:intron	25.0%
!	ACTCTAATCTTAAAACTTCT+TGG	-	chr6.1:28509467-28509486	MS.gene054173:intron	25.0%
!	AGTATTTCACAAACTATATC+AGG	-	chr6.1:28511076-28511095	MS.gene054173:intron	25.0%
!	ATTTATATAGGTGTGGTAAT+TGG	-	chr6.1:28511231-28511250	MS.gene054173:intron	25.0%
!	GAACTTATCTACTATTAATG+TGG	-	chr6.1:28511720-28511739	MS.gene054173:CDS	25.0%
!	GACACTCTTTACATTATAAA+TGG	+	chr6.1:28511477-28511496	None:intergenic	25.0%
!	GTAGATAAATGGTACAAAAT+AGG	+	chr6.1:28511914-28511933	None:intergenic	25.0%
!	TCATTATTTATAAGACCAAC+TGG	-	chr6.1:28512131-28512150	MS.gene054173:CDS	25.0%
!	TCTCAAATTATTATCAGTGT+CGG	+	chr6.1:28510471-28510490	None:intergenic	25.0%
!	TGTTATTATGTACATAGCAA+TGG	-	chr6.1:28509610-28509629	MS.gene054173:intron	25.0%
!!	ATGGATATTTTCTATTGCAT+TGG	-	chr6.1:28509727-28509746	MS.gene054173:intron	25.0%
!!	GAATTTACTAAGCTAAGTTT+TGG	-	chr6.1:28509821-28509840	MS.gene054173:intron	25.0%
!!	TATGGTTGGTTACATAAATT+TGG	-	chr6.1:28511269-28511288	MS.gene054173:intron	25.0%
!!!	AAGAAGTTCGATTTTGAAAA+CGG	+	chr6.1:28511207-28511226	None:intergenic	25.0%
!!!	TTTTAACTGTCTTTGTTTCT+TGG	-	chr6.1:28510200-28510219	MS.gene054173:CDS	25.0%
!!!	TTTTGGCTGAATAAAAGTTT+AGG	+	chr6.1:28510737-28510756	None:intergenic	25.0%
	AAACCAAGGAAAATTCCAAT+GGG	+	chr6.1:28511318-28511337	None:intergenic	30.0%
	AGAGTTGCATATAGATGAAT+TGG	+	chr6.1:28509452-28509471	None:intergenic	30.0%
	ATACCTTCTTGGTATAACAA+TGG	-	chr6.1:28511045-28511064	MS.gene054173:intron	30.0%
	ATCACTATTGGTAAAGATGA+AGG	+	chr6.1:28510996-28511015	None:intergenic	30.0%
	ATGCTGGTATTTATCTTCAA+AGG	-	chr6.1:28509387-28509406	MS.gene054173:CDS	30.0%
	ATGTACCATATCATCACTAT+TGG	+	chr6.1:28511008-28511027	None:intergenic	30.0%
	CGTTACTCTGGTAAAATAAA+GGG	+	chr6.1:28511172-28511191	None:intergenic	30.0%
	CTTCATCAGTGTATTTGATT+GGG	-	chr6.1:28509667-28509686	MS.gene054173:intron	30.0%
	CTTTACCAATAGTGATGATA+TGG	-	chr6.1:28511000-28511019	MS.gene054173:intron	30.0%
	GTATTTATCTTCAAAGGTCA+TGG	-	chr6.1:28509393-28509412	MS.gene054173:intron	30.0%
	GTTACTCTGGTAAAATAAAG+GGG	+	chr6.1:28511171-28511190	None:intergenic	30.0%
	TAACCATTGTTATACCAAGA+AGG	+	chr6.1:28511051-28511070	None:intergenic	30.0%
	TCGTTACTCTGGTAAAATAA+AGG	+	chr6.1:28511173-28511192	None:intergenic	30.0%
	TCTTCATCAGTGTATTTGAT+TGG	-	chr6.1:28509666-28509685	MS.gene054173:intron	30.0%
	TGTAATCATAGGTATCATGT+CGG	-	chr6.1:28510507-28510526	MS.gene054173:CDS	30.0%
	TTATGTGAGGAATTGAAATC+TGG	-	chr6.1:28510378-28510397	MS.gene054173:intron	30.0%
	TTCATCAGTGTATTTGATTG+GGG	-	chr6.1:28509668-28509687	MS.gene054173:intron	30.0%
	TTCTCAAATTATTATCGGTG+TGG	-	chr6.1:28510073-28510092	MS.gene054173:intron	30.0%
!	ACCAACTTCATTGATGATTT+AGG	+	chr6.1:28511401-28511420	None:intergenic	30.0%
!	ATATTGACTACTATGAAGCA+AGG	+	chr6.1:28510586-28510605	None:intergenic	30.0%
!	CCAACTTCATTGATGATTTA+GGG	+	chr6.1:28511400-28511419	None:intergenic	30.0%
!	GTTTTCAAAATCGAACTTCT+TGG	-	chr6.1:28511206-28511225	MS.gene054173:CDS	30.0%
!	TAGTAGAATGGCATATTTTC+CGG	+	chr6.1:28509519-28509538	None:intergenic	30.0%
	AACCAAGGAAAATTCCAATG+GGG	+	chr6.1:28511317-28511336	None:intergenic	35.0%
	AGCATCCAAATACTCTTTCT+TGG	-	chr6.1:28510898-28510917	MS.gene054173:intron	35.0%
	AGTGAATTAGCATACCTTCT+TGG	-	chr6.1:28511034-28511053	MS.gene054173:intron	35.0%
	ATCCAAATACTCTTTCTTGG+TGG	-	chr6.1:28510901-28510920	MS.gene054173:intron	35.0%
	ATTGTCTTGGATGGCATTTA+GGG	-	chr6.1:28509790-28509809	MS.gene054173:intron	35.0%
	CAAGATAAATATTCGACACC+AGG	+	chr6.1:28510004-28510023	None:intergenic	35.0%
	CATATAGATGAATTGGCAAG+AGG	+	chr6.1:28509445-28509464	None:intergenic	35.0%
	CATGTAGGGAATTAGTAGAA+TGG	+	chr6.1:28509531-28509550	None:intergenic	35.0%
	CATTCTACATATACTTTGCC+TGG	-	chr6.1:28511978-28511997	MS.gene054173:CDS	35.0%
	CCCTAAATCATCAATGAAGT+TGG	-	chr6.1:28511397-28511416	MS.gene054173:intron	35.0%
	CTTGGACATTTATATAGGTG+TGG	-	chr6.1:28511224-28511243	MS.gene054173:intron	35.0%
	GAAACCAAGGAAAATTCCAA+TGG	+	chr6.1:28511319-28511338	None:intergenic	35.0%
	GATGGCATTTAGGGAATTAT+GGG	-	chr6.1:28509799-28509818	MS.gene054173:intron	35.0%
	GCAGGAAAATTTCAAAATGC+TGG	-	chr6.1:28509371-28509390	MS.gene054173:CDS	35.0%
	GGTACCAAATCCTATCATTT+CGG	+	chr6.1:28511625-28511644	None:intergenic	35.0%
	GTATTTGATTGGGGAATGAT+TGG	-	chr6.1:28509677-28509696	MS.gene054173:intron	35.0%
	TCAAATTATTATCGGTGTGG+TGG	-	chr6.1:28510076-28510095	MS.gene054173:intron	35.0%
	TCTTAACTGTTTCAACGTGA+TGG	-	chr6.1:28511520-28511539	MS.gene054173:intron	35.0%
	TGGTAATATATGCCATTGGT+TGG	-	chr6.1:28509747-28509766	MS.gene054173:intron	35.0%
	TGTTCCAACCCTGAATATTA+AGG	+	chr6.1:28510258-28510277	None:intergenic	35.0%
	TTAAAACCATGATGCTTTCC+AGG	+	chr6.1:28511999-28512018	None:intergenic	35.0%
	TTGGAATAAGTTCAGCAGTA+AGG	-	chr6.1:28510290-28510309	MS.gene054173:intron	35.0%
	TTGGCATGCTATTACATTGT+TGG	-	chr6.1:28511288-28511307	MS.gene054173:intron	35.0%
	TTGGTTTCAACCAGCATTTA+GGG	-	chr6.1:28511331-28511350	MS.gene054173:intron	35.0%
!	ACTTCATTGATGATTTAGGG+AGG	+	chr6.1:28511397-28511416	None:intergenic	35.0%
!	AGTGACTATTTTCGTTACTC+TGG	+	chr6.1:28511184-28511203	None:intergenic	35.0%
!	CGGCAATATTCTTCAGATTT+TGG	-	chr6.1:28512099-28512118	MS.gene054173:CDS	35.0%
!	GCATTGGTAATATATGCCAT+TGG	-	chr6.1:28509743-28509762	MS.gene054173:intron	35.0%
!	GTCATTTCATCTGAAATTCG+AGG	+	chr6.1:28511771-28511790	None:intergenic	35.0%
!	GTCTTTTACCAAACTATGAG+TGG	-	chr6.1:28511885-28511904	MS.gene054173:CDS	35.0%
!	GTTTAGGTTAGTTCAGTCTT+AGG	+	chr6.1:28510721-28510740	None:intergenic	35.0%
!	TAGGGAGGATACATTTTCTA+GGG	+	chr6.1:28511382-28511401	None:intergenic	35.0%
!	TTAGGGAGGATACATTTTCT+AGG	+	chr6.1:28511383-28511402	None:intergenic	35.0%
!	TTTCATCTGAAATTCGAGGT+AGG	+	chr6.1:28511767-28511786	None:intergenic	35.0%
!!	AAAGAGTATTTGGATGCTCT+TGG	+	chr6.1:28510896-28510915	None:intergenic	35.0%
!!	TTAGCCTTAATATTCAGGGT+TGG	-	chr6.1:28510251-28510270	MS.gene054173:intron	35.0%
!!!	ATTTTTTGGCTTAGGGTCTA+TGG	-	chr6.1:28512062-28512081	MS.gene054173:CDS	35.0%
!!!	CTGTTGGTTCCTTTTCAATT+TGG	-	chr6.1:28509927-28509946	MS.gene054173:intron	35.0%
!!!	TTTTTTGGCTTAGGGTCTAT+GGG	-	chr6.1:28512063-28512082	MS.gene054173:CDS	35.0%
	AAACACATACTCCTCGGATT+AGG	-	chr6.1:28509973-28509992	MS.gene054173:intron	40.0%
	AATGCACTAGCAACACTATG+TGG	-	chr6.1:28509335-28509354	MS.gene054173:CDS	40.0%
	ACTAACATGAAAACCTGTGC+TGG	+	chr6.1:28510633-28510652	None:intergenic	40.0%
	ATAGGTGTGGTAATTGGATG+TGG	-	chr6.1:28511237-28511256	MS.gene054173:intron	40.0%
	ATGAAGCACAAACACAGACA+CGG	-	chr6.1:28510414-28510433	MS.gene054173:CDS	40.0%
	ATGTCTCAGTCTCTTCTCAT+TGG	-	chr6.1:28510926-28510945	MS.gene054173:intron	40.0%
	CTCAAGCCTATAATACGACT+AGG	+	chr6.1:28511579-28511598	None:intergenic	40.0%
	CTCACACCTAGTCGTATTAT+AGG	-	chr6.1:28511570-28511589	MS.gene054173:CDS	40.0%
	CTTGGTTTCAACCAGCATTT+AGG	-	chr6.1:28511330-28511349	MS.gene054173:intron	40.0%
	GATAATCCTGTCATTGCTGT+TGG	-	chr6.1:28509911-28509930	MS.gene054173:intron	40.0%
	GATTGTCTTGGATGGCATTT+AGG	-	chr6.1:28509789-28509808	MS.gene054173:intron	40.0%
	GCAATGGCAAGTAATATCTC+AGG	-	chr6.1:28509704-28509723	MS.gene054173:intron	40.0%
	GGATGGCATTTAGGGAATTA+TGG	-	chr6.1:28509798-28509817	MS.gene054173:intron	40.0%
	GGCTTGAGTGATTAATATGC+AGG	-	chr6.1:28511591-28511610	MS.gene054173:CDS	40.0%
	GTGATTAATATGCAGGTCGT+TGG	-	chr6.1:28511598-28511617	MS.gene054173:CDS	40.0%
	TATCAAGATGACCAGCAAGA+AGG	+	chr6.1:28509895-28509914	None:intergenic	40.0%
	TCCTTCTTTACACCAACCAA+TGG	+	chr6.1:28509762-28509781	None:intergenic	40.0%
	TGGCAAGAGGAATATACAAG+TGG	+	chr6.1:28509432-28509451	None:intergenic	40.0%
	TGGCAAGTAATATCTCAGGA+TGG	-	chr6.1:28509708-28509727	MS.gene054173:intron	40.0%
	TGGTCCGAAATGATAGGATT+TGG	-	chr6.1:28511618-28511637	MS.gene054173:CDS	40.0%
	TGGTGTAAAGAAGGATGGAA+TGG	-	chr6.1:28509767-28509786	MS.gene054173:intron	40.0%
	TGGTTTCAACCAGCATTTAG+GGG	-	chr6.1:28511332-28511351	MS.gene054173:intron	40.0%
	TTTGTTCTATACACCAGCAC+AGG	-	chr6.1:28510617-28510636	MS.gene054173:intron	40.0%
!	AAGGACATTCCACTGATTAG+GGG	+	chr6.1:28510567-28510586	None:intergenic	40.0%
!	ATTTTCCTGCACCATAAGCT+TGG	+	chr6.1:28509361-28509380	None:intergenic	40.0%
!	CAAGGACATTCCACTGATTA+GGG	+	chr6.1:28510568-28510587	None:intergenic	40.0%
!	CTAAATGCTGGTTGAAACCA+AGG	+	chr6.1:28511332-28511351	None:intergenic	40.0%
!	TTGGTTGGTGTAAAGAAGGA+TGG	-	chr6.1:28509762-28509781	MS.gene054173:intron	40.0%
!!	AAGGATGGAATGGATTGTCT+TGG	-	chr6.1:28509777-28509796	MS.gene054173:intron	40.0%
!!	ATGGAATGGATTGTCTTGGA+TGG	-	chr6.1:28509781-28509800	MS.gene054173:intron	40.0%
!!	GGGAATGATTGGTTTAGCAA+TGG	-	chr6.1:28509688-28509707	MS.gene054173:intron	40.0%
!!	TGCCACCAAGAAAGAGTATT+TGG	+	chr6.1:28510906-28510925	None:intergenic	40.0%
!!!	TTTTTGGCTTAGGGTCTATG+GGG	-	chr6.1:28512064-28512083	MS.gene054173:CDS	40.0%
	AAAGAGATAGCCGATCTTGC+CGG	-	chr6.1:28509497-28509516	MS.gene054173:intron	45.0%
	AAGGAACCAACAGCAATGAC+AGG	+	chr6.1:28509920-28509939	None:intergenic	45.0%
	ACAAACACAGACACGGACAT+CGG	-	chr6.1:28510421-28510440	MS.gene054173:CDS	45.0%
	ACACTATGTGGCCAAGCTTA+TGG	-	chr6.1:28509347-28509366	MS.gene054173:CDS	45.0%
	ACGGCGAAGGAAAACATGTA+GGG	+	chr6.1:28509545-28509564	None:intergenic	45.0%
	ATACCTTGACCCCTAAATGC+TGG	+	chr6.1:28511344-28511363	None:intergenic	45.0%
	ATACGACTAGGTGTGAGTAG+TGG	+	chr6.1:28511567-28511586	None:intergenic	45.0%
	ATAGGCGACCACTCATAGTT+TGG	+	chr6.1:28511896-28511915	None:intergenic	45.0%
	CATAGGTATCATGTCGGTGT+TGG	-	chr6.1:28510513-28510532	MS.gene054173:CDS	45.0%
	CTTCACGAGAGGCAAATTGA+CGG	+	chr6.1:28509564-28509583	None:intergenic	45.0%
	GCTACGAAACACATACTCCT+CGG	-	chr6.1:28509967-28509986	MS.gene054173:intron	45.0%
	GCTTGAAGAAACTTCACGAG+AGG	+	chr6.1:28509575-28509594	None:intergenic	45.0%
	GCTTGCATTATCCTTCTTGC+TGG	-	chr6.1:28509881-28509900	MS.gene054173:intron	45.0%
	GTGTGGTAATTGGATGTGGA+TGG	-	chr6.1:28511241-28511260	MS.gene054173:intron	45.0%
	GTTCGTGTCTCTAATACCCT+TGG	-	chr6.1:28510860-28510879	MS.gene054173:intron	45.0%
	TACATTGTTGGACTCCCCAT+TGG	-	chr6.1:28511300-28511319	MS.gene054173:intron	45.0%
	TAGAGACACGAACACTTGCA+AGG	+	chr6.1:28510853-28510872	None:intergenic	45.0%
	TCTTGGATGTGACATGCCAA+GGG	+	chr6.1:28510879-28510898	None:intergenic	45.0%
	TGGATGTGGATGGCAAGTTA+TGG	-	chr6.1:28511251-28511270	MS.gene054173:intron	45.0%
	TGTGGATGGCAAGTTATGGT+TGG	-	chr6.1:28511255-28511274	MS.gene054173:intron	45.0%
!	CTCCCCATTGGAATTTTCCT+TGG	-	chr6.1:28511312-28511331	MS.gene054173:intron	45.0%
!	GCAAGGACATTCCACTGATT+AGG	+	chr6.1:28510569-28510588	None:intergenic	45.0%
!	GCCATTGGTTGGTGTAAAGA+AGG	-	chr6.1:28509758-28509777	MS.gene054173:intron	45.0%
!	GGCATATTTTCCGGCAAGAT+CGG	+	chr6.1:28509510-28509529	None:intergenic	45.0%
!	TGGAACATGATGCTGCTTCT+TGG	-	chr6.1:28510271-28510290	MS.gene054173:intron	45.0%
!	TGGACTTGTTTGTGTCGTGT+CGG	-	chr6.1:28510096-28510115	MS.gene054173:intron	45.0%
!!	ACTTTGCCTGGAAAGCATCA+TGG	-	chr6.1:28511990-28512009	MS.gene054173:CDS	45.0%
!!	ATTATGTGTCGGTGTCGTGT+CGG	+	chr6.1:28510034-28510053	None:intergenic	45.0%
	ACTGGAACACCCCTAATCAG+TGG	-	chr6.1:28510555-28510574	MS.gene054173:CDS	50.0%
	CAACCAGCATTTAGGGGTCA+AGG	-	chr6.1:28511338-28511357	MS.gene054173:intron	50.0%
	CTATGGGGAGGAACAATGTG+CGG	-	chr6.1:28512079-28512098	MS.gene054173:CDS	50.0%
	CTCTTGGATGTGACATGCCA+AGG	+	chr6.1:28510880-28510899	None:intergenic	50.0%
	GACGGCGAAGGAAAACATGT+AGG	+	chr6.1:28509546-28509565	None:intergenic	50.0%
	GGTCGTTGGTCCGAAATGAT+AGG	-	chr6.1:28511612-28511631	MS.gene054173:CDS	50.0%
	ACCAGGACATGCCTAATCCG+AGG	+	chr6.1:28509987-28510006	None:intergenic	55.0%
	GAGAGGCAAATTGACGGCGA+AGG	+	chr6.1:28509558-28509577	None:intergenic	55.0%
	TGTGGCCAAGCTTATGGTGC+AGG	-	chr6.1:28509353-28509372	MS.gene054173:CDS	55.0%
	TTCCAGTGTCAGACACGCGT+CGG	+	chr6.1:28510542-28510561	None:intergenic	55.0%
	TTGGCTTAGGGTCTATGGGG+AGG	-	chr6.1:28512067-28512086	MS.gene054173:CDS	55.0%
!	TCCTCGGATTAGGCATGTCC+TGG	-	chr6.1:28509983-28510002	MS.gene054173:intron	55.0%
	CACCGACGCGTGTCTGACAC+TGG	-	chr6.1:28510537-28510556	MS.gene054173:CDS	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr6.1	gene	28509323	28512162	28509323	ID=MS.gene054173
chr6.1	mRNA	28509323	28512162	28509323	ID=MS.gene054173.t1;Parent=MS.gene054173
chr6.1	exon	28511537	28512162	28511537	ID=MS.gene054173.t1.exon1;Parent=MS.gene054173.t1
chr6.1	CDS	28511537	28512162	28511537	ID=cds.MS.gene054173.t1;Parent=MS.gene054173.t1
chr6.1	exon	28511174	28511230	28511174	ID=MS.gene054173.t1.exon2;Parent=MS.gene054173.t1
chr6.1	CDS	28511174	28511230	28511174	ID=cds.MS.gene054173.t1;Parent=MS.gene054173.t1
chr6.1	exon	28510388	28510626	28510388	ID=MS.gene054173.t1.exon3;Parent=MS.gene054173.t1
chr6.1	CDS	28510388	28510626	28510388	ID=cds.MS.gene054173.t1;Parent=MS.gene054173.t1
chr6.1	exon	28510126	28510244	28510126	ID=MS.gene054173.t1.exon4;Parent=MS.gene054173.t1
chr6.1	CDS	28510126	28510244	28510126	ID=cds.MS.gene054173.t1;Parent=MS.gene054173.t1
chr6.1	exon	28509323	28509409	28509323	ID=MS.gene054173.t1.exon5;Parent=MS.gene054173.t1
chr6.1	CDS	28509323	28509409	28509323	ID=cds.MS.gene054173.t1;Parent=MS.gene054173.t1

Gene Sequence

>MS.gene054173

TATGGTATGTCAAATGCACTAGCAACACTATGTGGCCAAGCTTATGGTGCAGGAAAATTTCAAAATGCTGGTATTTATCTTCAAAGGTCATGGATAGTACTCTTCACCACTTGTATATTCCTCTTGCCAATTCATCTATATGCAACTCTAATCTTAAAACTTCTTGGTCAAGAAAAAGAGATAGCCGATCTTGCCGGAAAATATGCCATTCTACTAATTCCCTACATGTTTTCCTTCGCCGTCAATTTGCCTCTCGTGAAGTTTCTTCAAGCACAAAGCAAAGTTAATGTTATTATGTACATAGCAATGGTTACATTACTCATTCAAAATGTTCTACTTTACATCTTCATCAGTGTATTTGATTGGGGAATGATTGGTTTAGCAATGGCAAGTAATATCTCAGGATGGATATTTTCTATTGCATTGGTAATATATGCCATTGGTTGGTGTAAAGAAGGATGGAATGGATTGTCTTGGATGGCATTTAGGGAATTATGGGAATTTACTAAGCTAAGTTTTGGTTCATCTGTAATGATTTGTTTAGAACAATGGTATACTGCTTGCATTATCCTTCTTGCTGGTCATCTTGATAATCCTGTCATTGCTGTTGGTTCCTTTTCAATTTGGTAAGAATAAGATGATAAGCTACGAAACACATACTCCTCGGATTAGGCATGTCCTGGTGTCGAATATTTATCTTGTTCGACACCGACACGACACCGACACATAATTACATTGAATTATATCATTTTCTCAAATTATTATCGGTGTGGTGGACTTGTTTGTGTCGTGTCGGTGTTCGTGTCTGAGTCTGTGCTTCGTAGATGATAAGTAATTTTTCATATATATTTTTGCTCATTTATTTGTCACTGTTACTTTTTAACTGTCTTTGTTTCTTGGTTTTCTTATTTTTTTTACTGTTATATTTTTAGCCTTAATATTCAGGGTTGGAACATGATGCTGCTTCTTGGAATAAGTTCAGCAGTAAGGTGAGTGACTATAAACTAAACACATTAGAGTTGAAAACATTTAAAAAAAAACCTATAAATTTGACTTTATGTGAGGAATTGAAATCTGGTGATATATTTGCTATGAAGCACAAACACAGACACGGACATCGGACACGACATAGACACTGACACACACCGACACTGATAATAATTTGAGAAAATAACATAATTTAGTGTAATCATAGGTATCATGTCGGTGTTGGACACCGACGCGTGTCTGACACTGGAACACCCCTAATCAGTGGAATGTCCTTGCTTCATAGTAGTCAATATATAGATCTTTGTTTGTTCTATACACCAGCACAGGTTTTCATGTTAGTCAAGATATAACTCATGTTTCATAAGAATTTCAGTACAAATGCTACTGTCATGTCTCTACATAACTCCTAAGACTGAACTAACCTAAACTTTTATTCAGCCAAAAAAGAAAATTAAAAAGAAATTAAATCTAGCATGTTGATTATATATTTGTCAAAATATTTTTTCAATGCTCACTAATTATTGATTGATTCTAATGCCTTGCAAGTGTTCGTGTCTCTAATACCCTTGGCATGTCACATCCAAGAGCATCCAAATACTCTTTCTTGGTGGCAATGTCTCAGTCTCTTCTCATTGGAATCATTTTAATGACTGTTATTTTCTTCAGTAAAGAAAAATTTGCCTTCATCTTTACCAATAGTGATGATATGGTACATGCTGCTAGTGAATTAGCATACCTTCTTGGTATAACAATGGTTATCAACAGTATTTCACAAACTATATCAGGTTATAATTTATTTGCTTTTGGACTAGAAAAAAGTTTAATGATTTAATCTTAGTTTAATTGCAGTTTTGACCCCTTTATTTTACCAGAGTAACGAAAATAGTCACTCCGTTTTCAAAATCGAACTTCTTGGACATTTATATAGGTGTGGTAATTGGATGTGGATGGCAAGTTATGGTTGGTTACATAAATTTGGCATGCTATTACATTGTTGGACTCCCCATTGGAATTTTCCTTGGTTTCAACCAGCATTTAGGGGTCAAGGTATAACACTAAGTTCTTGCCCTAGAAAATGTATCCTCCCTAAATCATCAATGAAGTTGGTTATATGTCTATTTATTAGGTTTTTTTGTATTATGTCTTTCTTATCTTACAAATCCATTTATAATGTAAAGAGTGTCGCTCTTTAGAAACTTTTTTCAAATCTTAACTGTTTCAACGTGATGGTTGAATTTTCTCTAATATTTTCCACTACTCACACCTAGTCGTATTATAGGCTTGAGTGATTAATATGCAGGTCGTTGGTCCGAAATGATAGGATTTGGTACCAAATTGTAATATTGAACTCATTCTTTTAAAATTTGTTTGTAAAGTGAGAATTTCACTTGTTATGAACTCTTTCGAGAACTTATCTACTATTAATGTGGGATTTGAGTTTTTATCAACAACCTACCTCGAATTTCAGATGAAATGACACAAATCTGTTTCAGCTTAAATAGGAGTATTGAGAATGAGTCCTAAGAATGTTATGTTCTAATTTTTTGAGAAATAATTTTGTTGTACAATATAGTCTTTTACCAAACTATGAGTGGTCGCCTATTTTGTACCATTTATCTACCAAAAAAAAGTTCTTATGTTTAGAGTTCTAACATTTAAATATGTCATTCTACATATACTTTGCCTGGAAAGCATCATGGTTTTAATGTCCAACTTATATTATGATTTCCTTTTCTTACAAATTTACATATTTTTTGGCTTAGGGTCTATGGGGAGGAACAATGTGCGGCAATATTCTTCAGATTTTGGTGCTCATAGTCATTATTTATAAGACCAACTGGACCAAAGAG

Protein sequence

>MS.gene054173.t1

YGMSNALATLCGQAYGAGKFQNAGIYLQRSWIVLFTTCIFLLPIHLYATLILKLLGQEKEIADLAGKYAILLIPYMFSFAVNLPLVKFLQAQSKVNVIMYIAMVTLLIQNVLLYIFISVFDWGMIGLAMASNISGWIFSIALVIYAIGWCKEGWNGLSWMAFRELWEFTKLSFGSSVMICLEQWYTACIILLAGHLDNPVIAVGSFSICLNIQGWNMMLLLGISSAVSVRVSNTLGMSHPRASKYSFLVAMSQSLLIGIILMTVIFFSKEKFAFIFTNSDDMVHAASELAYLLGITMVINSISQTISGVVIGCGWQVMVGYINLACYYIVGLPIGIFLGFNQHLGVKGLWGGTMCGNILQILVLIVIIYKTNWTKE