AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene84978

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene84978.t1 MTR_2g041270 50.073 687 279 8 45 727 1 627 0.0 667
MS.gene84978.t1 MTR_3g047950 50.000 490 211 5 251 725 113 583 2.84e-162 499
MS.gene84978.t1 MTR_4g109580 34.967 449 273 7 286 723 173 613 6.85e-78 268
MS.gene84978.t1 MTR_4g109580 36.788 386 227 6 286 662 173 550 7.86e-72 249
MS.gene84978.t1 MTR_5g026880 69.784 139 31 1 45 183 1 128 2.21e-56 191
MS.gene84978.t1 MTR_5g026880 77.778 36 8 0 1 36 92 127 3.17e-11 62.4
MS.gene84978.t1 MTR_8g062030 26.154 390 239 14 287 661 8 363 4.53e-21 99.4
MS.gene84978.t1 MTR_4g070090 24.194 372 254 14 296 658 42 394 2.57e-16 83.6
MS.gene84978.t1 MTR_5g027390 26.277 274 180 11 393 658 103 362 2.07e-15 80.9
MS.gene84978.t1 MTR_5g078250 21.466 382 271 12 287 658 8 370 1.33e-12 72.0
MS.gene84978.t1 MTR_2g048560 22.392 393 268 16 281 658 2 372 2.11e-12 71.6
MS.gene84978.t1 MTR_5g048670 37.278 169 59 9 2 165 213 339 2.26e-12 70.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene84978.t1 AT5G45400 48.966 870 340 22 45 836 1 844 0.0 777
MS.gene84978.t1 AT4G19130 50.184 815 346 15 44 837 1 776 0.0 757
MS.gene84978.t1 AT4G19130 50.246 814 345 15 45 837 1 775 0.0 757
MS.gene84978.t1 AT2G06510 46.921 682 313 9 45 721 1 638 0.0 633
MS.gene84978.t1 AT2G06510 47.193 659 299 9 68 721 1 615 0.0 620
MS.gene84978.t1 AT5G08020 35.181 469 279 9 275 726 142 602 2.59e-85 288
MS.gene84978.t1 AT5G61000 34.255 470 283 9 275 726 166 627 5.06e-77 266
MS.gene84978.t1 AT3G42860 33.333 141 68 3 842 982 239 353 6.89e-16 81.3
MS.gene84978.t1 AT3G42860 30.303 165 80 4 800 953 220 360 3.51e-12 69.7
MS.gene84978.t1 AT1G52950 21.860 430 285 16 287 690 10 414 1.02e-15 82.0

Find 266 sgRNAs with CRISPR-Local

Find 326 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTGGGGCATTTCCAATTT+TGG 0.090395 5.2:+17830061 MS.gene84978:CDS
GCTGGATCAGGTGGTGTTTC+TGG 0.138624 5.2:+17831511 MS.gene84978:CDS
TATATGTCATGCAGCAATTT+TGG 0.162794 5.2:+17831013 MS.gene84978:CDS
GCCATTTCCCATCTCCATTA+AGG 0.203065 5.2:-17830433 None:intergenic
CTATTAGTGTTGATCTTTAT+AGG 0.216902 5.2:-17830899 None:intergenic
GCCTATGCCAACAAGGTTTC+TGG 0.242187 5.2:+17831382 MS.gene84978:CDS
TTCTCGCTTAGCCGTTATTC+TGG 0.243165 5.2:-17829529 None:intergenic
ACTAATAGCGGAAGAGATTA+TGG 0.262204 5.2:+17830914 MS.gene84978:CDS
TTGGGACATTCCTCCCTTCC+TGG 0.264291 5.2:-17830202 None:intergenic
CATTGCCACCAGCCAATTAT+TGG 0.268493 5.2:+17830133 MS.gene84978:CDS
CAATCAGCTGCTGGTCAATT+AGG 0.281184 5.2:+17829153 MS.gene84978:CDS
TCTTCCTTTAGGCCCTCTAT+TGG 0.281446 5.2:-17829430 None:intergenic
AATCAGGTTCTACCAATAAT+TGG 0.283594 5.2:-17830145 None:intergenic
ATCATATGGGGATTTGGTTT+TGG 0.292258 5.2:+17831721 MS.gene84978:CDS
GGTGGATCGGGTTGTGCTTC+AGG 0.293016 5.2:+17831223 MS.gene84978:CDS
AAGGCTTCCCAGTCCAGTTT+TGG 0.297590 5.2:-17830843 None:intergenic
CAAATTAAAGATGAAAAGTT+AGG 0.298139 5.2:+17830287 MS.gene84978:CDS
CTGTTGATGCTTGTGATTAT+AGG 0.300029 5.2:+17830477 MS.gene84978:CDS
TTCAGAGAATCATCTAGTTT+TGG 0.304942 5.2:+17830236 MS.gene84978:CDS
AGGGTTATCTCTTGATCATT+AGG 0.309016 5.2:-17829747 None:intergenic
ATGAGAATCATATGGGGATT+TGG 0.309064 5.2:+17831715 MS.gene84978:CDS
TCTCCCAAGCCCCGGGTTGA+TGG 0.309531 5.2:-17831549 None:intergenic
TATGGATTCAAAGCAGATAT+TGG 0.313616 5.2:-17829483 None:intergenic
GACTTCAATGGGAAGTCTAT+TGG 0.320866 5.2:+17830107 MS.gene84978:CDS
AAATCAATAACTTGTAATAC+TGG 0.325356 5.2:-17828263 None:intergenic
ATTGTCCACATATTCTGATA+TGG 0.329169 5.2:-17829501 None:intergenic
GATTGTGCAGGTGCTTCTTT+TGG 0.329678 5.2:-17829105 None:intergenic
CTTGACAAATGGGACTTGAT+TGG 0.331100 5.2:+17829066 MS.gene84978:CDS
AAGCAAAAGAACTACTATAT+TGG 0.331169 5.2:-17830970 None:intergenic
AGAGCAGCACCTCAGTCTTA+TGG 0.332937 5.2:+17831301 MS.gene84978:CDS
AACTCTGTGATCACCAAAAC+TGG 0.335902 5.2:+17830830 MS.gene84978:CDS
CATTGGTGACATTGAAAGTA+TGG 0.337409 5.2:+17829845 MS.gene84978:CDS
GATCAAATCCAGAAGTGATT+TGG 0.343944 5.2:-17830768 None:intergenic
AAATGTGGCTGTGCCATCTA+TGG 0.351761 5.2:+17829242 MS.gene84978:CDS
GGGATTATACTTGGGGCTGG+GGG 0.353000 5.2:-17829462 None:intergenic
CTGCAAAATATTTGCGACTC+TGG 0.355243 5.2:+17830044 MS.gene84978:CDS
TTTGCTTCATCAGGTGCTCT+TGG 0.357399 5.2:+17830986 MS.gene84978:CDS
AGTGCAGCCAACAGGGTATC+TGG 0.363217 5.2:+17831202 MS.gene84978:CDS
TGGTGAATCAGGTGGTGCTT+CGG 0.366546 5.2:+17831402 MS.gene84978:CDS
GTAAAAGCCTCTGGAAAATC+AGG 0.366700 5.2:-17830161 None:intergenic
TGAGGTGCTGCTCTCATATA+AGG 0.367382 5.2:-17831292 None:intergenic
GATTGTGCAGGTGCTTCATT+TGG 0.368801 5.2:-17828107 None:intergenic
TGCTATAGATGGCAGCATAT+TGG 0.372249 5.2:+17831430 MS.gene84978:CDS
TGCAAAATATTTGCGACTCT+GGG 0.373210 5.2:+17830045 MS.gene84978:CDS
AACAAGGTTTCTGGTGAATC+AGG 0.373447 5.2:+17831391 MS.gene84978:CDS
GTTGGATCAGGTGGTGCTTC+GGG 0.375032 5.2:+17831124 MS.gene84978:CDS
GGTGAATCAGGTGGTGCTTC+GGG 0.375032 5.2:+17831403 MS.gene84978:CDS
AGTGTTTATTCTAACACTTC+TGG 0.375143 5.2:+17829294 MS.gene84978:CDS
TGGCACCGGTCTATTCAAAT+TGG 0.380597 5.2:-17829346 None:intergenic
AGATAGGAAATGTAACAAAA+AGG 0.384124 5.2:+17830406 MS.gene84978:CDS
CCATTTCCCATCTCCATTAA+GGG 0.388462 5.2:-17830432 None:intergenic
TGGGATTATACTTGGGGCTG+GGG 0.388493 5.2:-17829463 None:intergenic
GTAGAGTCTATCTTGTTTCA+AGG 0.388947 5.2:+17829685 MS.gene84978:CDS
ATGCCATCAACCCGGGGCTT+GGG 0.390412 5.2:+17831546 MS.gene84978:CDS
GGCCAGACATGTCTTTCAAC+TGG 0.394180 5.2:-17829968 None:intergenic
ACTTCAATGGGAAGTCTATT+GGG 0.394181 5.2:+17830108 MS.gene84978:CDS
ATGGATTCAAAGCAGATATT+GGG 0.394808 5.2:-17829482 None:intergenic
TGGATGTTATACTTGACAAA+TGG 0.395820 5.2:+17829055 MS.gene84978:CDS
ACCTGAACAGTCTGCTGGGG+GGG 0.395896 5.2:+17831081 MS.gene84978:CDS
CTGTTGGCTGCACTCATACT+AGG 0.400416 5.2:-17831193 None:intergenic
ATCTGATCCTGAGGTGCTGC+AGG 0.401508 5.2:-17831472 None:intergenic
GGAGCATCATTTCTTCCTTT+AGG 0.402141 5.2:-17829441 None:intergenic
TCGCCCAATGTCCAGGTTGT+TGG 0.403374 5.2:-17831162 None:intergenic
TCGCCCAATGTCCAGGTTGT+TGG 0.403374 5.2:-17831261 None:intergenic
CTAGTATGAGTGCAGCCAAC+AGG 0.404300 5.2:+17831194 MS.gene84978:CDS
ATCTAAGTCCAAATCACTTC+TGG 0.405778 5.2:+17830760 MS.gene84978:CDS
CCCTTAATGGAGATGGGAAA+TGG 0.405998 5.2:+17830432 MS.gene84978:CDS
GATGCCATCAACCCGGGGCT+TGG 0.409267 5.2:+17831545 MS.gene84978:CDS
CAGCGGCCATCTGCTGGATC+AGG 0.411074 5.2:+17831499 MS.gene84978:CDS
TGTTGGATCAGGTGGTGCTT+CGG 0.416969 5.2:+17831123 MS.gene84978:CDS
TTGAAATCATTTACTCTGGC+AGG 0.416976 5.2:-17831631 None:intergenic
GGACTTCTGAGAAGCCTGAT+TGG 0.419699 5.2:+17830309 MS.gene84978:CDS
AATAGACCGGTGCCAGTCAA+TGG 0.428354 5.2:+17829354 MS.gene84978:CDS
ATGCCAACAACCTGGACATT+GGG 0.430086 5.2:+17831159 MS.gene84978:CDS
ATGCCAACAACCTGGACATT+GGG 0.430086 5.2:+17831258 MS.gene84978:CDS
CTGAAAAGTATTTGCGAGCC+TGG 0.431754 5.2:+17831583 MS.gene84978:CDS
AGACTGTCCTGCAGCACCTC+AGG 0.434199 5.2:+17831465 MS.gene84978:CDS
GCAGATATTGGGATTATACT+TGG 0.435057 5.2:-17829471 None:intergenic
AAAAGCACAAGAAGGCCATC+AGG 0.438807 5.2:-17831753 None:intergenic
ACAGCTTGTCCTATCATGAT+AGG 0.445959 5.2:+17830383 MS.gene84978:CDS
GCCAGAGTAAATGATTTCAA+TGG 0.446003 5.2:+17831634 MS.gene84978:CDS
TTGTCCTCTCTCCCAAGCCC+CGG 0.448519 5.2:-17831557 None:intergenic
GCCAGAGTAAATGACTTCAA+TGG 0.448872 5.2:+17830095 MS.gene84978:CDS
ATATGCTGATGAGAATCATA+TGG 0.450330 5.2:+17831707 MS.gene84978:CDS
ATAGATGGCACAGCCACATT+TGG 0.450374 5.2:-17829240 None:intergenic
AACACGGTGTCTGTTGGATC+AGG 0.453791 5.2:+17831112 MS.gene84978:CDS
GACGGAAATTGTAAATCTGC+TGG 0.454634 5.2:-17829821 None:intergenic
ATTCGGACGGTGGAGAAATA+CGG 0.455045 5.2:+17829610 MS.gene84978:CDS
GCTTCATTTGGTGCCCGGAC+AGG 0.456494 5.2:-17828095 None:intergenic
ATGGCAGCATATTGGACATT+GGG 0.457784 5.2:+17831438 MS.gene84978:CDS
TTGGGATTATACTTGGGGCT+GGG 0.458057 5.2:-17829464 None:intergenic
CAATAATTGGCTGGTGGCAA+TGG 0.462805 5.2:-17830132 None:intergenic
CAACCCGGGGCTTGGGAGAG+AGG 0.463638 5.2:+17831553 MS.gene84978:CDS
TGTCCTCTCTCCCAAGCCCC+GGG 0.464062 5.2:-17831556 None:intergenic
AATGCAGGGCAAGGAAGATA+TGG 0.467360 5.2:+17831331 MS.gene84978:CDS
CCTCCTATGTACACCAATAG+AGG 0.467683 5.2:+17829417 MS.gene84978:CDS
CTTCGGGTAATTGCTATAGA+TGG 0.468477 5.2:+17831419 MS.gene84978:CDS
TTCCTATCTCCTATCATGAT+AGG 0.468609 5.2:-17830392 None:intergenic
CCAGAGTAAATGACTTCAAT+GGG 0.469838 5.2:+17830096 MS.gene84978:CDS
GTTCAAGTTAAAAGTAAAAG+AGG 0.469995 5.2:+17830673 MS.gene84978:CDS
TTCTATGATGTAACTGAAGT+TGG 0.471055 5.2:+17829663 MS.gene84978:CDS
CTTGTTGGCATAGGCCTCTC+CGG 0.471182 5.2:-17831374 None:intergenic
GAAGTGTTGAATTAACTGTA+TGG 0.471291 5.2:+17829991 MS.gene84978:CDS
AATTATCATCATTGTTGAGC+TGG 0.472133 5.2:+17829035 MS.gene84978:CDS
AAGGTTACCCTTAATGGAGA+TGG 0.472344 5.2:+17830425 MS.gene84978:CDS
GACAATTAAAGCCAGAATAA+CGG 0.475855 5.2:+17829518 MS.gene84978:CDS
TGATTCACCAGAAACCTTGT+TGG 0.477492 5.2:-17831389 None:intergenic
CCAGAGTAAATGATTTCAAT+GGG 0.480347 5.2:+17831635 MS.gene84978:CDS
AACGGTGGTTCCTATGCAGC+TGG 0.480530 5.2:+17829204 MS.gene84978:CDS
ACCAAAATTGAAAATGCTCC+AGG 0.482322 5.2:-17831601 None:intergenic
TCTTATGGAAACTGTAATGC+AGG 0.483347 5.2:+17831316 MS.gene84978:CDS
CAGATATTGGGATTATACTT+GGG 0.483457 5.2:-17829470 None:intergenic
CCTCTCAGTGTAAAAGCCTC+TGG 0.484441 5.2:-17830170 None:intergenic
GGATGTTATACTTGACAAAT+GGG 0.487105 5.2:+17829056 MS.gene84978:CDS
CAGTTGTTCGCCCAATGTCC+AGG 0.491637 5.2:-17831169 None:intergenic
CAGTTGTTCGCCCAATGTCC+AGG 0.491637 5.2:-17831268 None:intergenic
TGCTATAGATGCCATCAACC+CGG 0.492846 5.2:+17831538 MS.gene84978:CDS
AACAGGGTATCTGGTGGATC+GGG 0.492863 5.2:+17831211 MS.gene84978:CDS
ACTTGATTGGAGAACCTGTC+CGG 0.493584 5.2:+17828081 MS.gene84978:CDS
GTATAACTGATGTGATATCA+AGG 0.493821 5.2:-17829767 None:intergenic
CCCATTGAAATCATTTACTC+TGG 0.495273 5.2:-17831635 None:intergenic
ATGGACAAATGTGACTTGAT+TGG 0.496262 5.2:+17828068 MS.gene84978:CDS
TGTGATCACCAAAACTGGAC+TGG 0.497425 5.2:+17830835 MS.gene84978:CDS
CTCCAGTTGAAAGACATGTC+TGG 0.498906 5.2:+17829966 MS.gene84978:CDS
CAATAACTTGTAATACTGGT+TGG 0.500538 5.2:-17828259 None:intergenic
ATCCACCTGAACAGTCTGCT+GGG 0.501379 5.2:+17831077 MS.gene84978:CDS
ACAGTCGGACGATCCATAGA+TGG 0.501554 5.2:-17829255 None:intergenic
ATTGGGATTATACTTGGGGC+TGG 0.502489 5.2:-17829465 None:intergenic
GGAGGGTGGCGAGGACATCA+TGG 0.503852 5.2:+17830559 MS.gene84978:CDS
CCCATTGAAGTCATTTACTC+TGG 0.505729 5.2:-17830096 None:intergenic
TGCTATAAATGCCAACAACC+TGG 0.506400 5.2:+17831151 MS.gene84978:CDS
TGCTATAAATGCCAACAACC+TGG 0.506400 5.2:+17831250 MS.gene84978:CDS
CATACTTTCAATGTCACCAA+TGG 0.506813 5.2:-17829844 None:intergenic
GTAAATCAAGTGAGTCGGTA+TGG 0.507462 5.2:+17830944 MS.gene84978:CDS
AAGTGTTGAATTAACTGTAT+GGG 0.508629 5.2:+17829992 MS.gene84978:CDS
CGAGGACATCATGGGTATGC+CGG 0.509817 5.2:+17830568 MS.gene84978:CDS
CTCTGAAAATAGATTGACTT+GGG 0.512351 5.2:-17830220 None:intergenic
AATCCACCTGAACAGTCTGC+TGG 0.512712 5.2:+17831076 MS.gene84978:CDS
CAACAGGGTATCTGGTGGAT+CGG 0.513413 5.2:+17831210 MS.gene84978:CDS
TAGAGTCTATCTTGTTTCAA+GGG 0.515360 5.2:+17829686 MS.gene84978:CDS
AATGCCAACAACCTGGACAT+TGG 0.516196 5.2:+17831158 MS.gene84978:CDS
AATGCCAACAACCTGGACAT+TGG 0.516196 5.2:+17831257 MS.gene84978:CDS
CTAATAGCGGAAGAGATTAT+GGG 0.516251 5.2:+17830915 MS.gene84978:CDS
GATTTCAATGGGAAGTCTGT+TGG 0.516438 5.2:+17831646 MS.gene84978:CDS
GCACAGATAGATATCCAATC+AGG 0.516540 5.2:-17830323 None:intergenic
TACGCCAACACGGTGTCTGT+TGG 0.516806 5.2:+17831106 MS.gene84978:CDS
CAGGTGGATTTCTAAGATGT+AGG 0.517112 5.2:-17831063 None:intergenic
CAGGTGCTTCATTTGGTGCC+CGG 0.517129 5.2:-17828100 None:intergenic
ATCATTAATGCCAGCTGCAT+AGG 0.517325 5.2:-17829214 None:intergenic
GTCCTATCATGATAGGAGAT+AGG 0.520523 5.2:+17830390 MS.gene84978:CDS
ATTTACAATTTCCGTCCCAT+TGG 0.520615 5.2:+17829828 MS.gene84978:CDS
ATGTAGCTTGTCTAGTCTCA+AGG 0.525968 5.2:-17830862 None:intergenic
TGAATCCATATCAGAATATG+TGG 0.525989 5.2:+17829496 MS.gene84978:CDS
AAATTAAAGATGAAAAGTTA+GGG 0.526868 5.2:+17830288 MS.gene84978:CDS
ATACTTTCAATGTCACCAAT+GGG 0.528293 5.2:-17829843 None:intergenic
CGGCCATCTGCTGGATCAGG+TGG 0.528992 5.2:+17831502 MS.gene84978:CDS
GGCAACTTGCTTTAATGCCG+TGG 0.529916 5.2:+17829632 MS.gene84978:CDS
TTCGGACGGTGGAGAAATAC+GGG 0.532082 5.2:+17829611 MS.gene84978:CDS
ATAAGTTGATTCATTCTGGA+AGG 0.533033 5.2:+17828387 MS.gene84978:CDS
AAGATGTGTTTCACGTCGGA+GGG 0.533524 5.2:+17828233 MS.gene84978:CDS
TATGCTGATGAGAATCATAT+GGG 0.535206 5.2:+17831708 MS.gene84978:CDS
CTATTGGTGTACATAGGAGG+TGG 0.535325 5.2:-17829414 None:intergenic
CAATCTGCTGTGAGTCATGC+AGG 0.538679 5.2:+17828125 MS.gene84978:CDS
ATAGACCGGTGCCAGTCAAT+GGG 0.538835 5.2:+17829355 MS.gene84978:CDS
CAATCTGATGTGAGTCATGC+AGG 0.538866 5.2:+17829123 MS.gene84978:CDS
TTTCTCATGATTGATGCTGT+AGG 0.540594 5.2:-17829915 None:intergenic
CATTCTGGAAGGTTGCAGAA+AGG 0.542226 5.2:+17828398 MS.gene84978:CDS
GGTGATCACAGAGTTGATAG+TGG 0.547876 5.2:-17830822 None:intergenic
TATAACAATGCCCGAGGTGA+GGG 0.549414 5.2:+17829561 MS.gene84978:CDS
GATGGCAGCATATTGGACAT+TGG 0.549717 5.2:+17831437 MS.gene84978:CDS
CTTGATTGGAAAACCTGTCC+CGG 0.551122 5.2:+17829080 MS.gene84978:CDS
ACCAGAAACCTTGTTGGCAT+AGG 0.551491 5.2:-17831383 None:intergenic
ATGATCACACTGGAATGACT+TGG 0.551593 5.2:+17830522 MS.gene84978:CDS
GGCTGTCGGTACATAGGCTG+AGG 0.552176 5.2:-17829393 None:intergenic
GGAGGTGGCTGTCGGTACAT+AGG 0.552994 5.2:-17829399 None:intergenic
AACTCTACTAAAAGCAGAGA+AGG 0.553912 5.2:+17830727 MS.gene84978:CDS
AGGTTCTACCAATAATTGGC+TGG 0.555216 5.2:-17830141 None:intergenic
GCTATAGATGCCATCAACCC+GGG 0.555357 5.2:+17831539 MS.gene84978:CDS
ATTTGCAGAAATCATCCGTA+AGG 0.556193 5.2:+17830631 MS.gene84978:CDS
GCAAGATACAGTACATCTGA+TGG 0.557340 5.2:+17829321 MS.gene84978:CDS
TACACCAATAGAGGGCCTAA+AGG 0.557875 5.2:+17829426 MS.gene84978:CDS
TAACGGCTAAGCGAGAACTC+AGG 0.558612 5.2:+17829535 MS.gene84978:CDS
ACGGAAATTGTAAATCTGCT+GGG 0.558897 5.2:-17829820 None:intergenic
TGGAGCCAATTTGAATAGAC+CGG 0.560042 5.2:+17829341 MS.gene84978:CDS
CGCTGCAAAATCTGATCCTG+AGG 0.560669 5.2:-17831481 None:intergenic
ATTTCTCGAAATCAGTCTAC+CGG 0.561489 5.2:+17831355 MS.gene84978:CDS
AGGTTACCCTTAATGGAGAT+GGG 0.564333 5.2:+17830426 MS.gene84978:CDS
TACCAACTCGTTCTCTCCGA+TGG 0.564991 5.2:+17828326 MS.gene84978:CDS
CGGAGAGGCCTATGCCAACA+AGG 0.565500 5.2:+17831375 MS.gene84978:CDS
AGAGGATGGTTTGACCAGGA+AGG 0.566968 5.2:+17830188 MS.gene84978:CDS
TAAGACCCATTGACTGGCAC+CGG 0.569305 5.2:-17829360 None:intergenic
TTGTTTATAATATGAACCAT+CGG 0.569671 5.2:-17828342 None:intergenic
AGATATTGGGATTATACTTG+GGG 0.572799 5.2:-17829469 None:intergenic
CCTCTATTGGTGTACATAGG+AGG 0.573407 5.2:-17829417 None:intergenic
AGTGTTGAATTAACTGTATG+GGG 0.577662 5.2:+17829993 MS.gene84978:CDS
AACGGCTAAGCGAGAACTCA+GGG 0.580930 5.2:+17829536 MS.gene84978:CDS
GAGGGTGGCGAGGACATCAT+GGG 0.581476 5.2:+17830560 MS.gene84978:CDS
GGAGATGTACAATCAGCTGC+TGG 0.581552 5.2:+17829144 MS.gene84978:CDS
GTGATCACCAAAACTGGACT+GGG 0.583747 5.2:+17830836 MS.gene84978:CDS
ATGGGAAATGGCGCTGTGAA+AGG 0.585117 5.2:+17830444 MS.gene84978:CDS
CTTGATTGGAGAACCTGTCC+GGG 0.585525 5.2:+17828082 MS.gene84978:CDS
TTATCTCTTGATCATTAGGA+AGG 0.585586 5.2:-17829743 None:intergenic
CTATAACAATGCCCGAGGTG+AGG 0.587915 5.2:+17829560 MS.gene84978:CDS
CCACCTGAACAGTCTGCTGG+GGG 0.589289 5.2:+17831079 MS.gene84978:CDS
GTAAAAGAGGAGACGTTCAA+TGG 0.597381 5.2:+17830686 MS.gene84978:CDS
GAATAAACACTGCTAGCTGA+AGG 0.597823 5.2:-17829282 None:intergenic
GAAAATTCACAGTATTTGAA+CGG 0.598419 5.2:+17829186 MS.gene84978:CDS
GGAAACTGTAATGCAGGGCA+AGG 0.598616 5.2:+17831322 MS.gene84978:CDS
ATTCAGTGAAGAGAACCTTA+CGG 0.598795 5.2:-17830646 None:intergenic
ATAAAGATCAACACTAATAG+CGG 0.599910 5.2:+17830902 MS.gene84978:CDS
GAACTCATTGAGCTTAACAA+TGG 0.601952 5.2:-17828423 None:intergenic
GACTAGACAAGCTACATCAC+AGG 0.604344 5.2:+17830868 MS.gene84978:CDS
AGAGTCTATCTTGTTTCAAG+GGG 0.605100 5.2:+17829687 MS.gene84978:CDS
TCTCTGAAAATAGATTGACT+TGG 0.605586 5.2:-17830221 None:intergenic
GAAGATGTGTTTCACGTCGG+AGG 0.606551 5.2:+17828232 MS.gene84978:CDS
GAGTTATCATCGTCAAGACA+TGG 0.606744 5.2:-17829792 None:intergenic
TCCACCTGAACAGTCTGCTG+GGG 0.606964 5.2:+17831078 MS.gene84978:CDS
CGAACATAAGACCCATTGAC+TGG 0.607967 5.2:-17829366 None:intergenic
CATAAGTCTGAGAAAGCAGA+AGG 0.611471 5.2:+17830797 MS.gene84978:CDS
GGCCCTCTATTGGTGTACAT+AGG 0.615254 5.2:-17829420 None:intergenic
CATCAGTAAATCAAGTGAGT+CGG 0.616975 5.2:+17830939 MS.gene84978:CDS
GATGGTTTGACCAGGAAGGG+AGG 0.620111 5.2:+17830192 MS.gene84978:CDS
TATGGAAAGCAACAGCATTG+TGG 0.620227 5.2:+17829863 MS.gene84978:CDS
TGATCACACTGGAATGACTT+GGG 0.622050 5.2:+17830523 MS.gene84978:CDS
AGCACAAGAAGGCCATCAGG+AGG 0.622193 5.2:-17831750 None:intergenic
GAGGATGGTTTGACCAGGAA+GGG 0.623269 5.2:+17830189 MS.gene84978:CDS
TTGCTAGCAAAAGCACAAGA+AGG 0.626384 5.2:-17831761 None:intergenic
TATAACTGATGTGATATCAA+GGG 0.627164 5.2:-17829766 None:intergenic
ATCATAGAACTGATCAGCCA+CGG 0.627780 5.2:-17829649 None:intergenic
TGACTCACAGCAGATTGTGC+AGG 0.628551 5.2:-17828119 None:intergenic
TGACTCACATCAGATTGTGC+AGG 0.628551 5.2:-17829117 None:intergenic
CGGAAATTGTAAATCTGCTG+GGG 0.629297 5.2:-17829819 None:intergenic
CGATCCACCAGATACCCTGT+TGG 0.629820 5.2:-17831209 None:intergenic
AGTAGAGTTGACTTAACACA+TGG 0.633645 5.2:-17830713 None:intergenic
ACGGTGTCTGTTGGATCAGG+TGG 0.633900 5.2:+17831115 MS.gene84978:CDS
CATTAATGATAGACCAAATG+TGG 0.633940 5.2:+17829227 MS.gene84978:CDS
AATTCACAGTATTTGAACGG+TGG 0.635714 5.2:+17829189 MS.gene84978:CDS
CTTATGGAAACTGTAATGCA+GGG 0.640195 5.2:+17831317 MS.gene84978:CDS
TTCTACCAATAATTGGCTGG+TGG 0.640568 5.2:-17830138 None:intergenic
CTCCTATGTACACCAATAGA+GGG 0.641575 5.2:+17829418 MS.gene84978:CDS
ACACCACCTGATCCAGCAGA+TGG 0.644770 5.2:-17831505 None:intergenic
AACAGACACCGTGTTGGCGT+AGG 0.646718 5.2:-17831104 None:intergenic
CTAGCTGAAGGATTCACAGT+CGG 0.647168 5.2:-17829270 None:intergenic
GCAAAATATTTGCGACTCTG+GGG 0.647962 5.2:+17830046 MS.gene84978:CDS
ATACAGTTAATTCAACACTT+CGG 0.648500 5.2:-17829989 None:intergenic
TGTCGGTACATAGGCTGAGG+AGG 0.649146 5.2:-17829390 None:intergenic
TAGTATGAGTGCAGCCAACA+GGG 0.649627 5.2:+17831195 MS.gene84978:CDS
TTTCAATGTCACCAATGGGA+CGG 0.650355 5.2:-17829839 None:intergenic
CACCTGAACAGTCTGCTGGG+GGG 0.650603 5.2:+17831080 MS.gene84978:CDS
GCAGCCAACAGGGTATCTGG+TGG 0.651792 5.2:+17831205 MS.gene84978:CDS
TGTACATAGGAGGTGGCTGT+CGG 0.652272 5.2:-17829407 None:intergenic
CTATAGATGCCATCAACCCG+GGG 0.654378 5.2:+17831540 MS.gene84978:CDS
AAGGTTTCTGGTGAATCAGG+TGG 0.658655 5.2:+17831394 MS.gene84978:CDS
ATGCAGATAGATGATCACAC+TGG 0.664780 5.2:+17830512 MS.gene84978:CDS
ACTGAGAGGATGGTTTGACC+AGG 0.666614 5.2:+17830184 MS.gene84978:CDS
GATGGTTCATATTATAAACA+AGG 0.670519 5.2:+17828344 MS.gene84978:CDS
CATTGTGGATGTGATTGCTG+TGG 0.675524 5.2:+17829878 MS.gene84978:CDS
TGATCCAACAGACACCGTGT+TGG 0.681662 5.2:-17831110 None:intergenic
TCGAAATCAGTCTACCGGAG+AGG 0.692831 5.2:+17831360 MS.gene84978:CDS
AGGGTCTATAACAATGCCCG+AGG 0.697756 5.2:+17829555 MS.gene84978:CDS
AACCATCGGAGAGAACGAGT+TGG 0.698524 5.2:-17828328 None:intergenic
TTACAGTTTCCATAAGACTG+AGG 0.702834 5.2:-17831310 None:intergenic
AATGAAGATGTGTTTCACGT+CGG 0.707624 5.2:+17828229 MS.gene84978:CDS
ATGCTGATGAGAATCATATG+GGG 0.711908 5.2:+17831709 MS.gene84978:CDS
ATGGCTGTGAATCTAACACA+AGG 0.714694 5.2:+17828200 MS.gene84978:CDS
GTGTTGAATTAACTGTATGG+GGG 0.715516 5.2:+17829994 MS.gene84978:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAGAAAAAAAAAAACAA+AGG - chr5.2:17828499-17828518 None:intergenic 10.0%
!! ATGTTTATGTTAATATAAAA+TGG + chr5.2:17828523-17828542 MS.gene84978:intron 10.0%
!!! AACAAGATTAAATTTTTTTT+TGG - chr5.2:17828771-17828790 None:intergenic 10.0%
!!! ACAAGATTAAATTTTTTTTT+GGG - chr5.2:17828770-17828789 None:intergenic 10.0%
!! AAATTAAAGATGAAAAGTTA+GGG + chr5.2:17830288-17830307 MS.gene84978:CDS 15.0%
!! ATCAAAACTAAAAAACTAAC+AGG - chr5.2:17828899-17828918 None:intergenic 20.0%
!! CAAATTAAAGATGAAAAGTT+AGG + chr5.2:17830287-17830306 MS.gene84978:CDS 20.0%
!! TAGTTGAAGAATTTCATTAA+AGG + chr5.2:17828862-17828881 MS.gene84978:intron 20.0%
!! TTATGTTAACTATGTATTGA+AGG + chr5.2:17828565-17828584 MS.gene84978:intron 20.0%
!! TTGTTTATAATATGAACCAT+CGG - chr5.2:17828345-17828364 None:intergenic 20.0%
!!! AAAAATAAGTTGATTCATTC+TGG + chr5.2:17828383-17828402 MS.gene84978:CDS 20.0%
!!! AAATCAATAACTTGTAATAC+TGG - chr5.2:17828266-17828285 None:intergenic 20.0%
!!! AGTATTTTCTTTTGATCTTT+TGG + chr5.2:17829587-17829606 MS.gene84978:CDS 20.0%
!!! TTTAGTTTTGATATTGTTGA+AGG + chr5.2:17828907-17828926 MS.gene84978:intron 20.0%
! AAGCAAAAGAACTACTATAT+TGG - chr5.2:17830973-17830992 None:intergenic 25.0%
! AGATAGGAAATGTAACAAAA+AGG + chr5.2:17830406-17830425 MS.gene84978:CDS 25.0%
! ATAAAGATCAACACTAATAG+CGG + chr5.2:17830902-17830921 MS.gene84978:CDS 25.0%
! ATACAGTTAATTCAACACTT+CGG - chr5.2:17829992-17830011 None:intergenic 25.0%
! ATGTATTGAAGGTGAATTAT+GGG + chr5.2:17828576-17828595 MS.gene84978:intron 25.0%
! GAAAATTCACAGTATTTGAA+CGG + chr5.2:17829186-17829205 MS.gene84978:CDS 25.0%
! GATGGTTCATATTATAAACA+AGG + chr5.2:17828344-17828363 MS.gene84978:CDS 25.0%
! TATAACTGATGTGATATCAA+GGG - chr5.2:17829769-17829788 None:intergenic 25.0%
! TATGTATTGAAGGTGAATTA+TGG + chr5.2:17828575-17828594 MS.gene84978:intron 25.0%
! TTTGAGAAAATGACATAACT+TGG + chr5.2:17828612-17828631 MS.gene84978:intron 25.0%
!! GTTCAAGTTAAAAGTAAAAG+AGG + chr5.2:17830673-17830692 MS.gene84978:CDS 25.0%
!! TTCTTTTGATCTTTTGGATT+CGG + chr5.2:17829593-17829612 MS.gene84978:CDS 25.0%
!!! AAGTGTTGAATTAACTGTAT+GGG + chr5.2:17829992-17830011 MS.gene84978:CDS 25.0%
!!! CTATTAGTGTTGATCTTTAT+AGG - chr5.2:17830902-17830921 None:intergenic 25.0%
AACAAAAAGGTTACCCTTAA+TGG + chr5.2:17830419-17830438 MS.gene84978:CDS 30.0%
AATCAGGTTCTACCAATAAT+TGG - chr5.2:17830148-17830167 None:intergenic 30.0%
AATTATCATCATTGTTGAGC+TGG + chr5.2:17829035-17829054 MS.gene84978:CDS 30.0%
AGATATTGGGATTATACTTG+GGG - chr5.2:17829472-17829491 None:intergenic 30.0%
AGTGTTTATTCTAACACTTC+TGG + chr5.2:17829294-17829313 MS.gene84978:CDS 30.0%
ATACTTTCAATGTCACCAAT+GGG - chr5.2:17829846-17829865 None:intergenic 30.0%
ATATGCTGATGAGAATCATA+TGG + chr5.2:17831707-17831726 MS.gene84978:CDS 30.0%
ATGGATTCAAAGCAGATATT+GGG - chr5.2:17829485-17829504 None:intergenic 30.0%
ATTGTCCACATATTCTGATA+TGG - chr5.2:17829504-17829523 None:intergenic 30.0%
CAGATATTGGGATTATACTT+GGG - chr5.2:17829473-17829492 None:intergenic 30.0%
CATTAATGATAGACCAAATG+TGG + chr5.2:17829227-17829246 MS.gene84978:CDS 30.0%
CCAGAGTAAATGATTTCAAT+GGG + chr5.2:17831635-17831654 MS.gene84978:CDS 30.0%
GACAATTAAAGCCAGAATAA+CGG + chr5.2:17829518-17829537 MS.gene84978:CDS 30.0%
GCATCAATCATGAGAAAAAA+TGG + chr5.2:17829921-17829940 MS.gene84978:CDS 30.0%
GGATGTTATACTTGACAAAT+GGG + chr5.2:17829056-17829075 MS.gene84978:CDS 30.0%
GTATAACTGATGTGATATCA+AGG - chr5.2:17829770-17829789 None:intergenic 30.0%
TATGCTGATGAGAATCATAT+GGG + chr5.2:17831708-17831727 MS.gene84978:CDS 30.0%
TATGGATTCAAAGCAGATAT+TGG - chr5.2:17829486-17829505 None:intergenic 30.0%
TGAATCCATATCAGAATATG+TGG + chr5.2:17829496-17829515 MS.gene84978:CDS 30.0%
TGGATGTTATACTTGACAAA+TGG + chr5.2:17829055-17829074 MS.gene84978:CDS 30.0%
TTATCTCTTGATCATTAGGA+AGG - chr5.2:17829746-17829765 None:intergenic 30.0%
TTCTATGATGTAACTGAAGT+TGG + chr5.2:17829663-17829682 MS.gene84978:CDS 30.0%
! AGAAAATGCAAATCTTTTGC+CGG - chr5.2:17830590-17830609 None:intergenic 30.0%
! AGTGTTGAATTAACTGTATG+GGG + chr5.2:17829993-17830012 MS.gene84978:CDS 30.0%
! CAATAACTTGTAATACTGGT+TGG - chr5.2:17828262-17828281 None:intergenic 30.0%
! CTCTGAAAATAGATTGACTT+GGG - chr5.2:17830223-17830242 None:intergenic 30.0%
! GCAGATTTTACAACCAAAAT+TGG - chr5.2:17830077-17830096 None:intergenic 30.0%
! TAGAGTCTATCTTGTTTCAA+GGG + chr5.2:17829686-17829705 MS.gene84978:CDS 30.0%
! TATATGTCATGCAGCAATTT+TGG + chr5.2:17831013-17831032 MS.gene84978:CDS 30.0%
! TCTCTGAAAATAGATTGACT+TGG - chr5.2:17830224-17830243 None:intergenic 30.0%
! TGATTGATATTCTTTTGAGC+TGG - chr5.2:17829723-17829742 None:intergenic 30.0%
!! AAAATGACATAACTTGGTGT+TGG + chr5.2:17828618-17828637 MS.gene84978:intron 30.0%
!! ACTTCAGCAGATTTTTGAAA+TGG + chr5.2:17828820-17828839 MS.gene84978:intron 30.0%
!! ATAAGTTGATTCATTCTGGA+AGG + chr5.2:17828387-17828406 MS.gene84978:CDS 30.0%
!! GAAGTGTTGAATTAACTGTA+TGG + chr5.2:17829991-17830010 MS.gene84978:CDS 30.0%
!! TGAAGGCTTTATTAACCAAT+CGG + chr5.2:17828924-17828943 MS.gene84978:intron 30.0%
!! TTCAGAGAATCATCTAGTTT+TGG + chr5.2:17830236-17830255 MS.gene84978:CDS 30.0%
AACTCTACTAAAAGCAGAGA+AGG + chr5.2:17830727-17830746 MS.gene84978:CDS 35.0%
AATGAAGATGTGTTTCACGT+CGG + chr5.2:17828229-17828248 MS.gene84978:CDS 35.0%
AATTCACAGTATTTGAACGG+TGG + chr5.2:17829189-17829208 MS.gene84978:CDS 35.0%
ACCAAAATTGAAAATGCTCC+AGG - chr5.2:17831604-17831623 None:intergenic 35.0%
ACGGAAATTGTAAATCTGCT+GGG - chr5.2:17829823-17829842 None:intergenic 35.0%
ACTTCAATGGGAAGTCTATT+GGG + chr5.2:17830108-17830127 MS.gene84978:CDS 35.0%
AGGGTTATCTCTTGATCATT+AGG - chr5.2:17829750-17829769 None:intergenic 35.0%
ATCTAAGTCCAAATCACTTC+TGG + chr5.2:17830760-17830779 MS.gene84978:CDS 35.0%
ATGAGAATCATATGGGGATT+TGG + chr5.2:17831715-17831734 MS.gene84978:CDS 35.0%
ATGCTGATGAGAATCATATG+GGG + chr5.2:17831709-17831728 MS.gene84978:CDS 35.0%
ATGGACAAATGTGACTTGAT+TGG + chr5.2:17828068-17828087 MS.gene84978:CDS 35.0%
ATTCAGTGAAGAGAACCTTA+CGG - chr5.2:17830649-17830668 None:intergenic 35.0%
ATTTACAATTTCCGTCCCAT+TGG + chr5.2:17829828-17829847 MS.gene84978:CDS 35.0%
ATTTCTCGAAATCAGTCTAC+CGG + chr5.2:17831355-17831374 MS.gene84978:CDS 35.0%
ATTTGCAGAAATCATCCGTA+AGG + chr5.2:17830631-17830650 MS.gene84978:CDS 35.0%
CATACTTTCAATGTCACCAA+TGG - chr5.2:17829847-17829866 None:intergenic 35.0%
CATCAGTAAATCAAGTGAGT+CGG + chr5.2:17830939-17830958 MS.gene84978:CDS 35.0%
CCAGAGTAAATGACTTCAAT+GGG + chr5.2:17830096-17830115 MS.gene84978:CDS 35.0%
CCCATTGAAATCATTTACTC+TGG - chr5.2:17831638-17831657 None:intergenic 35.0%
CTGTTGATGCTTGTGATTAT+AGG + chr5.2:17830477-17830496 MS.gene84978:CDS 35.0%
CTTATGGAAACTGTAATGCA+GGG + chr5.2:17831317-17831336 MS.gene84978:CDS 35.0%
GAACTCATTGAGCTTAACAA+TGG - chr5.2:17828426-17828445 None:intergenic 35.0%
GATCAAATCCAGAAGTGATT+TGG - chr5.2:17830771-17830790 None:intergenic 35.0%
GCAAATCATTTGTCAATCAC+TGG - chr5.2:17828997-17829016 None:intergenic 35.0%
GCAGATATTGGGATTATACT+TGG - chr5.2:17829474-17829493 None:intergenic 35.0%
GCCAGAGTAAATGATTTCAA+TGG + chr5.2:17831634-17831653 MS.gene84978:CDS 35.0%
GTGTTGAATTAACTGTATGG+GGG + chr5.2:17829994-17830013 MS.gene84978:CDS 35.0%
TCTTATGGAAACTGTAATGC+AGG + chr5.2:17831316-17831335 MS.gene84978:CDS 35.0%
TGCAAAATATTTGCGACTCT+GGG + chr5.2:17830045-17830064 MS.gene84978:CDS 35.0%
TTACAGTTTCCATAAGACTG+AGG - chr5.2:17831313-17831332 None:intergenic 35.0%
TTCCTATCTCCTATCATGAT+AGG - chr5.2:17830395-17830414 None:intergenic 35.0%
TTGAAATCATTTACTCTGGC+AGG - chr5.2:17831634-17831653 None:intergenic 35.0%
TTTCTCATGATTGATGCTGT+AGG - chr5.2:17829918-17829937 None:intergenic 35.0%
! AAAATACTTTTCCCTCACCT+CGG - chr5.2:17829575-17829594 None:intergenic 35.0%
! ACTAATAGCGGAAGAGATTA+TGG + chr5.2:17830914-17830933 MS.gene84978:CDS 35.0%
! AGAGTCTATCTTGTTTCAAG+GGG + chr5.2:17829687-17829706 MS.gene84978:CDS 35.0%
! AGTAGAGTTGACTTAACACA+TGG - chr5.2:17830716-17830735 None:intergenic 35.0%
! AGTAGTTCTTTTGCTTCATC+AGG + chr5.2:17830977-17830996 MS.gene84978:CDS 35.0%
! CATTGGTGACATTGAAAGTA+TGG + chr5.2:17829845-17829864 MS.gene84978:CDS 35.0%
! CTAATAGCGGAAGAGATTAT+GGG + chr5.2:17830915-17830934 MS.gene84978:CDS 35.0%
! GTAGAGTCTATCTTGTTTCA+AGG + chr5.2:17829685-17829704 MS.gene84978:CDS 35.0%
! TTTGATCTTTTGGATTCGGA+CGG + chr5.2:17829597-17829616 MS.gene84978:CDS 35.0%
!! ATCATATGGGGATTTGGTTT+TGG + chr5.2:17831721-17831740 MS.gene84978:CDS 35.0%
!! GTTTTGGTAAAAGTGAAGTG+CGG + chr5.2:17830252-17830271 MS.gene84978:CDS 35.0%
!! TTTCATCAAAAGTGTCAGGA+GGG + chr5.2:17828672-17828691 MS.gene84978:intron 35.0%
!!! AGCAGATTTTTGAAATGGTG+GGG + chr5.2:17828825-17828844 MS.gene84978:intron 35.0%
!!! CAGCAGATTTTTGAAATGGT+GGG + chr5.2:17828824-17828843 MS.gene84978:intron 35.0%
!!! TCAGCAGATTTTTGAAATGG+TGG + chr5.2:17828823-17828842 MS.gene84978:intron 35.0%
AACTCTGTGATCACCAAAAC+TGG + chr5.2:17830830-17830849 MS.gene84978:CDS 40.0%
AAGGTTACCCTTAATGGAGA+TGG + chr5.2:17830425-17830444 MS.gene84978:CDS 40.0%
ACAGCTTGTCCTATCATGAT+AGG + chr5.2:17830383-17830402 MS.gene84978:CDS 40.0%
AGGTTACCCTTAATGGAGAT+GGG + chr5.2:17830426-17830445 MS.gene84978:CDS 40.0%
AGGTTCTACCAATAATTGGC+TGG - chr5.2:17830144-17830163 None:intergenic 40.0%
ATCATAGAACTGATCAGCCA+CGG - chr5.2:17829652-17829671 None:intergenic 40.0%
ATCATTAATGCCAGCTGCAT+AGG - chr5.2:17829217-17829236 None:intergenic 40.0%
ATGATCACACTGGAATGACT+TGG + chr5.2:17830522-17830541 MS.gene84978:CDS 40.0%
ATGCAGATAGATGATCACAC+TGG + chr5.2:17830512-17830531 MS.gene84978:CDS 40.0%
ATGGCAGCATATTGGACATT+GGG + chr5.2:17831438-17831457 MS.gene84978:CDS 40.0%
ATGGCTGTGAATCTAACACA+AGG + chr5.2:17828200-17828219 MS.gene84978:CDS 40.0%
CATAAGTCTGAGAAAGCAGA+AGG + chr5.2:17830797-17830816 MS.gene84978:CDS 40.0%
CCATTTCCCATCTCCATTAA+GGG - chr5.2:17830435-17830454 None:intergenic 40.0%
CCCATTGAAGTCATTTACTC+TGG - chr5.2:17830099-17830118 None:intergenic 40.0%
CGGAAATTGTAAATCTGCTG+GGG - chr5.2:17829822-17829841 None:intergenic 40.0%
CTCCTATGTACACCAATAGA+GGG + chr5.2:17829418-17829437 MS.gene84978:CDS 40.0%
CTGCAAAATATTTGCGACTC+TGG + chr5.2:17830044-17830063 MS.gene84978:CDS 40.0%
CTTCGGGTAATTGCTATAGA+TGG + chr5.2:17831419-17831438 MS.gene84978:CDS 40.0%
CTTGACAAATGGGACTTGAT+TGG + chr5.2:17829066-17829085 MS.gene84978:CDS 40.0%
GAATAAACACTGCTAGCTGA+AGG - chr5.2:17829285-17829304 None:intergenic 40.0%
GACGGAAATTGTAAATCTGC+TGG - chr5.2:17829824-17829843 None:intergenic 40.0%
GACTTCAATGGGAAGTCTAT+TGG + chr5.2:17830107-17830126 MS.gene84978:CDS 40.0%
GAGTTATCATCGTCAAGACA+TGG - chr5.2:17829795-17829814 None:intergenic 40.0%
GATTTCAATGGGAAGTCTGT+TGG + chr5.2:17831646-17831665 MS.gene84978:CDS 40.0%
GCAAAATATTTGCGACTCTG+GGG + chr5.2:17830046-17830065 MS.gene84978:CDS 40.0%
GCAAGATACAGTACATCTGA+TGG + chr5.2:17829321-17829340 MS.gene84978:CDS 40.0%
GCACAGATAGATATCCAATC+AGG - chr5.2:17830326-17830345 None:intergenic 40.0%
GCCAGAGTAAATGACTTCAA+TGG + chr5.2:17830095-17830114 MS.gene84978:CDS 40.0%
GTAAAAGAGGAGACGTTCAA+TGG + chr5.2:17830686-17830705 MS.gene84978:CDS 40.0%
GTAAATCAAGTGAGTCGGTA+TGG + chr5.2:17830944-17830963 MS.gene84978:CDS 40.0%
GTAGTAAAACTTCCTCCGAT+TGG - chr5.2:17828942-17828961 None:intergenic 40.0%
GTCCTATCATGATAGGAGAT+AGG + chr5.2:17830390-17830409 MS.gene84978:CDS 40.0%
TATGGAAAGCAACAGCATTG+TGG + chr5.2:17829863-17829882 MS.gene84978:CDS 40.0%
TGATCACACTGGAATGACTT+GGG + chr5.2:17830523-17830542 MS.gene84978:CDS 40.0%
TGATTCACCAGAAACCTTGT+TGG - chr5.2:17831392-17831411 None:intergenic 40.0%
TGCTATAAATGCCAACAACC+TGG + chr5.2:17831151-17831170 MS.gene84978:CDS 40.0%
TGCTATAGATGGCAGCATAT+TGG + chr5.2:17831430-17831449 MS.gene84978:CDS 40.0%
TGGAGCCAATTTGAATAGAC+CGG + chr5.2:17829341-17829360 MS.gene84978:CDS 40.0%
TTCTACCAATAATTGGCTGG+TGG - chr5.2:17830141-17830160 None:intergenic 40.0%
TTTCAATGTCACCAATGGGA+CGG - chr5.2:17829842-17829861 None:intergenic 40.0%
! AAATACTTTTCCCTCACCTC+GGG - chr5.2:17829574-17829593 None:intergenic 40.0%
! ATGGGGGAGTTTTTGCAATA+CGG + chr5.2:17830010-17830029 MS.gene84978:CDS 40.0%
! ATGTAGCTTGTCTAGTCTCA+AGG - chr5.2:17830865-17830884 None:intergenic 40.0%
! ATGTCATGCAGCAATTTTGG+AGG + chr5.2:17831016-17831035 MS.gene84978:CDS 40.0%
! CTCCTGACACTTTTGATGAA+AGG - chr5.2:17828673-17828692 None:intergenic 40.0%
! GGAGCATCATTTCTTCCTTT+AGG - chr5.2:17829444-17829463 None:intergenic 40.0%
! GTAAAAGCCTCTGGAAAATC+AGG - chr5.2:17830164-17830183 None:intergenic 40.0%
! TTTTGGTATTCTCCTCCTGA+TGG + chr5.2:17831738-17831757 MS.gene84978:CDS 40.0%
!! AACAAGGTTTCTGGTGAATC+AGG + chr5.2:17831391-17831410 MS.gene84978:CDS 40.0%
!! AGAAAGCACTGCTGAAAAAG+CGG + chr5.2:17828175-17828194 MS.gene84978:CDS 40.0%
!! AGGCTTTATTAACCAATCGG+AGG + chr5.2:17828927-17828946 MS.gene84978:intron 40.0%
!! CAGGTGGATTTCTAAGATGT+AGG - chr5.2:17831066-17831085 None:intergenic 40.0%
!! CTTTCATCAAAAGTGTCAGG+AGG + chr5.2:17828671-17828690 MS.gene84978:intron 40.0%
!! CTTTTGATGAAAGGCGTATC+CGG - chr5.2:17828664-17828683 None:intergenic 40.0%
!! GCCTGGAGCATTTTCAATTT+TGG + chr5.2:17831600-17831619 MS.gene84978:CDS 40.0%
!!! AGATTTTTGAAATGGTGGGG+TGG + chr5.2:17828828-17828847 MS.gene84978:intron 40.0%
AAATGTGGCTGTGCCATCTA+TGG + chr5.2:17829242-17829261 MS.gene84978:CDS 45.0%
AAGATGTGTTTCACGTCGGA+GGG + chr5.2:17828233-17828252 MS.gene84978:CDS 45.0%
AATGCAGGGCAAGGAAGATA+TGG + chr5.2:17831331-17831350 MS.gene84978:CDS 45.0%
AATGCCAACAACCTGGACAT+TGG + chr5.2:17831158-17831177 MS.gene84978:CDS 45.0%
ACCAGAAACCTTGTTGGCAT+AGG - chr5.2:17831386-17831405 None:intergenic 45.0%
ACTTGATTGGAGAACCTGTC+CGG + chr5.2:17828081-17828100 MS.gene84978:CDS 45.0%
ATAGATGGCACAGCCACATT+TGG - chr5.2:17829243-17829262 None:intergenic 45.0%
ATGCCAACAACCTGGACATT+GGG + chr5.2:17831159-17831178 MS.gene84978:CDS 45.0%
ATTCGGACGGTGGAGAAATA+CGG + chr5.2:17829610-17829629 MS.gene84978:CDS 45.0%
ATTGGGATTATACTTGGGGC+TGG - chr5.2:17829468-17829487 None:intergenic 45.0%
CAATAATTGGCTGGTGGCAA+TGG - chr5.2:17830135-17830154 None:intergenic 45.0%
CAATCAGCTGCTGGTCAATT+AGG + chr5.2:17829153-17829172 MS.gene84978:CDS 45.0%
CAATCTGATGTGAGTCATGC+AGG + chr5.2:17829123-17829142 MS.gene84978:CDS 45.0%
CACTGCTGAAAAAGCGGTTA+TGG + chr5.2:17828181-17828200 MS.gene84978:CDS 45.0%
CATTGCCACCAGCCAATTAT+TGG + chr5.2:17830133-17830152 MS.gene84978:CDS 45.0%
CATTGTGGATGTGATTGCTG+TGG + chr5.2:17829878-17829897 MS.gene84978:CDS 45.0%
CCCTTAATGGAGATGGGAAA+TGG + chr5.2:17830432-17830451 MS.gene84978:CDS 45.0%
CCTCCTATGTACACCAATAG+AGG + chr5.2:17829417-17829436 MS.gene84978:CDS 45.0%
CCTCTATTGGTGTACATAGG+AGG - chr5.2:17829420-17829439 None:intergenic 45.0%
CGAACATAAGACCCATTGAC+TGG - chr5.2:17829369-17829388 None:intergenic 45.0%
CTAGCTGAAGGATTCACAGT+CGG - chr5.2:17829273-17829292 None:intergenic 45.0%
CTATTGGTGTACATAGGAGG+TGG - chr5.2:17829417-17829436 None:intergenic 45.0%
CTCCAGTTGAAAGACATGTC+TGG + chr5.2:17829966-17829985 MS.gene84978:CDS 45.0%
CTTGATTGGAAAACCTGTCC+CGG + chr5.2:17829080-17829099 MS.gene84978:CDS 45.0%
GACTAGACAAGCTACATCAC+AGG + chr5.2:17830868-17830887 MS.gene84978:CDS 45.0%
GATGGCAGCATATTGGACAT+TGG + chr5.2:17831437-17831456 MS.gene84978:CDS 45.0%
GATTGTGCAGGTGCTTCATT+TGG - chr5.2:17828110-17828129 None:intergenic 45.0%
GCCATTTCCCATCTCCATTA+AGG - chr5.2:17830436-17830455 None:intergenic 45.0%
GTGATCACCAAAACTGGACT+GGG + chr5.2:17830836-17830855 MS.gene84978:CDS 45.0%
TACACCAATAGAGGGCCTAA+AGG + chr5.2:17829426-17829445 MS.gene84978:CDS 45.0%
TAGTATGAGTGCAGCCAACA+GGG + chr5.2:17831195-17831214 MS.gene84978:CDS 45.0%
TATAACAATGCCCGAGGTGA+GGG + chr5.2:17829561-17829580 MS.gene84978:CDS 45.0%
TCTTCCTTTAGGCCCTCTAT+TGG - chr5.2:17829433-17829452 None:intergenic 45.0%
TGACTCACATCAGATTGTGC+AGG - chr5.2:17829120-17829139 None:intergenic 45.0%
TGCTATAGATGCCATCAACC+CGG + chr5.2:17831538-17831557 MS.gene84978:CDS 45.0%
TGTGATCACCAAAACTGGAC+TGG + chr5.2:17830835-17830854 MS.gene84978:CDS 45.0%
TGTTGGACACAGACACATGT+TGG + chr5.2:17828635-17828654 MS.gene84978:intron 45.0%
TTCTCGCTTAGCCGTTATTC+TGG - chr5.2:17829532-17829551 None:intergenic 45.0%
TTGGGATTATACTTGGGGCT+GGG - chr5.2:17829467-17829486 None:intergenic 45.0%
TTTGCTTCATCAGGTGCTCT+TGG + chr5.2:17830986-17831005 MS.gene84978:CDS 45.0%
TTTGTCAATCACTGGCACAG+AGG - chr5.2:17828989-17829008 None:intergenic 45.0%
! AAAAGCACAAGAAGGCCATC+AGG - chr5.2:17831756-17831775 None:intergenic 45.0%
! AGGCTTTTACACTGAGAGGA+TGG + chr5.2:17830174-17830193 MS.gene84978:CDS 45.0%
! CATTCTGGAAGGTTGCAGAA+AGG + chr5.2:17828398-17828417 MS.gene84978:CDS 45.0%
! CTCAGGATCAGATTTTGCAG+CGG + chr5.2:17831482-17831501 MS.gene84978:CDS 45.0%
! GATTGTGCAGGTGCTTCTTT+TGG - chr5.2:17829108-17829127 None:intergenic 45.0%
! GGGAGTTTTTGCAATACGGA+AGG + chr5.2:17830014-17830033 MS.gene84978:CDS 45.0%
! GGTAGAACCTGATTTTCCAG+AGG + chr5.2:17830154-17830173 MS.gene84978:CDS 45.0%
!! AAGGTTTCTGGTGAATCAGG+TGG + chr5.2:17831394-17831413 MS.gene84978:CDS 45.0%
!! CGCCTTTCATCAAAAGTGTC+AGG + chr5.2:17828668-17828687 MS.gene84978:intron 45.0%
!! CTGAAAAGTATTTGCGAGCC+TGG + chr5.2:17831583-17831602 MS.gene84978:CDS 45.0%
!! GACTTGGGTTACTGCTTTTC+AGG + chr5.2:17830538-17830557 MS.gene84978:CDS 45.0%
!! GGTGATCACAGAGTTGATAG+TGG - chr5.2:17830825-17830844 None:intergenic 45.0%
!! TGAGGTGCTGCTCTCATATA+AGG - chr5.2:17831295-17831314 None:intergenic 45.0%
!! TGGCACCGGTCTATTCAAAT+TGG - chr5.2:17829349-17829368 None:intergenic 45.0%
!! TGGGTTACTGCTTTTCAGGA+GGG + chr5.2:17830542-17830561 MS.gene84978:CDS 45.0%
!! TTGGGTTACTGCTTTTCAGG+AGG + chr5.2:17830541-17830560 MS.gene84978:CDS 45.0%
!!! CTCTGGGGCATTTCCAATTT+TGG + chr5.2:17830061-17830080 MS.gene84978:CDS 45.0%
AACACGGTGTCTGTTGGATC+AGG + chr5.2:17831112-17831131 MS.gene84978:CDS 50.0%
AACCATCGGAGAGAACGAGT+TGG - chr5.2:17828331-17828350 None:intergenic 50.0%
AACGGCTAAGCGAGAACTCA+GGG + chr5.2:17829536-17829555 MS.gene84978:CDS 50.0%
AATCCACCTGAACAGTCTGC+TGG + chr5.2:17831076-17831095 MS.gene84978:CDS 50.0%
ACAGTCGGACGATCCATAGA+TGG - chr5.2:17829258-17829277 None:intergenic 50.0%
ACTGAGAGGATGGTTTGACC+AGG + chr5.2:17830184-17830203 MS.gene84978:CDS 50.0%
AGAGCAGCACCTCAGTCTTA+TGG + chr5.2:17831301-17831320 MS.gene84978:CDS 50.0%
AGAGGATGGTTTGACCAGGA+AGG + chr5.2:17830188-17830207 MS.gene84978:CDS 50.0%
AGGGTCTATAACAATGCCCG+AGG + chr5.2:17829555-17829574 MS.gene84978:CDS 50.0%
ATCCACCTGAACAGTCTGCT+GGG + chr5.2:17831077-17831096 MS.gene84978:CDS 50.0%
ATGGGAAATGGCGCTGTGAA+AGG + chr5.2:17830444-17830463 MS.gene84978:CDS 50.0%
CAATCTGCTGTGAGTCATGC+AGG + chr5.2:17828125-17828144 MS.gene84978:CDS 50.0%
CACAGACACATGTTGGACAC+CGG + chr5.2:17828642-17828661 MS.gene84978:intron 50.0%
CCTCTCAGTGTAAAAGCCTC+TGG - chr5.2:17830173-17830192 None:intergenic 50.0%
CGCTGCAAAATCTGATCCTG+AGG - chr5.2:17831484-17831503 None:intergenic 50.0%
CTAGTATGAGTGCAGCCAAC+AGG + chr5.2:17831194-17831213 MS.gene84978:CDS 50.0%
CTATAACAATGCCCGAGGTG+AGG + chr5.2:17829560-17829579 MS.gene84978:CDS 50.0%
CTATAGATGCCATCAACCCG+GGG + chr5.2:17831540-17831559 MS.gene84978:CDS 50.0%
CTTGATTGGAGAACCTGTCC+GGG + chr5.2:17828082-17828101 MS.gene84978:CDS 50.0%
GAAGATGTGTTTCACGTCGG+AGG + chr5.2:17828232-17828251 MS.gene84978:CDS 50.0%
GAGGATGGTTTGACCAGGAA+GGG + chr5.2:17830189-17830208 MS.gene84978:CDS 50.0%
GCCTATGCCAACAAGGTTTC+TGG + chr5.2:17831382-17831401 MS.gene84978:CDS 50.0%
GCTATAGATGCCATCAACCC+GGG + chr5.2:17831539-17831558 MS.gene84978:CDS 50.0%
GGAAACTGTAATGCAGGGCA+AGG + chr5.2:17831322-17831341 MS.gene84978:CDS 50.0%
GGAGATGTACAATCAGCTGC+TGG + chr5.2:17829144-17829163 MS.gene84978:CDS 50.0%
GGCCAGACATGTCTTTCAAC+TGG - chr5.2:17829971-17829990 None:intergenic 50.0%
GGCCCTCTATTGGTGTACAT+AGG - chr5.2:17829423-17829442 None:intergenic 50.0%
TAACGGCTAAGCGAGAACTC+AGG + chr5.2:17829535-17829554 MS.gene84978:CDS 50.0%
TACCAACTCGTTCTCTCCGA+TGG + chr5.2:17828326-17828345 MS.gene84978:CDS 50.0%
TCGAAATCAGTCTACCGGAG+AGG + chr5.2:17831360-17831379 MS.gene84978:CDS 50.0%
TGACTCACAGCAGATTGTGC+AGG - chr5.2:17828122-17828141 None:intergenic 50.0%
TGATCCAACAGACACCGTGT+TGG - chr5.2:17831113-17831132 None:intergenic 50.0%
TGGGATTATACTTGGGGCTG+GGG - chr5.2:17829466-17829485 None:intergenic 50.0%
TGGTGAATCAGGTGGTGCTT+CGG + chr5.2:17831402-17831421 MS.gene84978:CDS 50.0%
TGTACATAGGAGGTGGCTGT+CGG - chr5.2:17829410-17829429 None:intergenic 50.0%
TGTTGGATCAGGTGGTGCTT+CGG + chr5.2:17831123-17831142 MS.gene84978:CDS 50.0%
TTCGGACGGTGGAGAAATAC+GGG + chr5.2:17829611-17829630 MS.gene84978:CDS 50.0%
! AACAGGGTATCTGGTGGATC+GGG + chr5.2:17831211-17831230 MS.gene84978:CDS 50.0%
! AAGGCTTCCCAGTCCAGTTT+TGG - chr5.2:17830846-17830865 None:intergenic 50.0%
! AATAGACCGGTGCCAGTCAA+TGG + chr5.2:17829354-17829373 MS.gene84978:CDS 50.0%
! ATAGACCGGTGCCAGTCAAT+GGG + chr5.2:17829355-17829374 MS.gene84978:CDS 50.0%
! CAACAGGGTATCTGGTGGAT+CGG + chr5.2:17831210-17831229 MS.gene84978:CDS 50.0%
! CCAGAGGCTTTTACACTGAG+AGG + chr5.2:17830170-17830189 MS.gene84978:CDS 50.0%
! CTGTTGGCTGCACTCATACT+AGG - chr5.2:17831196-17831215 None:intergenic 50.0%
! GATCTTTTGGATTCGGACGG+TGG + chr5.2:17829600-17829619 MS.gene84978:CDS 50.0%
! GGACTTCTGAGAAGCCTGAT+TGG + chr5.2:17830309-17830328 MS.gene84978:CDS 50.0%
! GGCAACTTGCTTTAATGCCG+TGG + chr5.2:17829632-17829651 MS.gene84978:CDS 50.0%
! TAAGACCCATTGACTGGCAC+CGG - chr5.2:17829363-17829382 None:intergenic 50.0%
!! GTTACTGCTTTTCAGGAGGG+TGG + chr5.2:17830545-17830564 MS.gene84978:CDS 50.0%
AACGGTGGTTCCTATGCAGC+TGG + chr5.2:17829204-17829223 MS.gene84978:CDS 55.0%
ACACCACCTGATCCAGCAGA+TGG - chr5.2:17831508-17831527 None:intergenic 55.0%
ACGGTGTCTGTTGGATCAGG+TGG + chr5.2:17831115-17831134 MS.gene84978:CDS 55.0%
AGCACAAGAAGGCCATCAGG+AGG - chr5.2:17831753-17831772 None:intergenic 55.0%
CAGTTGTTCGCCCAATGTCC+AGG - chr5.2:17831172-17831191 None:intergenic 55.0%
CGAGGACATCATGGGTATGC+CGG + chr5.2:17830568-17830587 MS.gene84978:CDS 55.0%
CGATCCACCAGATACCCTGT+TGG - chr5.2:17831212-17831231 None:intergenic 55.0%
CTTGTTGGCATAGGCCTCTC+CGG - chr5.2:17831377-17831396 None:intergenic 55.0%
GATGGTTTGACCAGGAAGGG+AGG + chr5.2:17830192-17830211 MS.gene84978:CDS 55.0%
GCTGGATCAGGTGGTGTTTC+TGG + chr5.2:17831511-17831530 MS.gene84978:CDS 55.0%
GGGATTATACTTGGGGCTGG+GGG - chr5.2:17829465-17829484 None:intergenic 55.0%
GGTGAATCAGGTGGTGCTTC+GGG + chr5.2:17831403-17831422 MS.gene84978:CDS 55.0%
GTTGGATCAGGTGGTGCTTC+GGG + chr5.2:17831124-17831143 MS.gene84978:CDS 55.0%
TACGCCAACACGGTGTCTGT+TGG + chr5.2:17831106-17831125 MS.gene84978:CDS 55.0%
TCCACCTGAACAGTCTGCTG+GGG + chr5.2:17831078-17831097 MS.gene84978:CDS 55.0%
TCGCCCAATGTCCAGGTTGT+TGG - chr5.2:17831165-17831184 None:intergenic 55.0%
TGTCGGTACATAGGCTGAGG+AGG - chr5.2:17829393-17829412 None:intergenic 55.0%
TTGGGACATTCCTCCCTTCC+TGG - chr5.2:17830205-17830224 None:intergenic 55.0%
! AACAGACACCGTGTTGGCGT+AGG - chr5.2:17831107-17831126 None:intergenic 55.0%
! AGTGCAGCCAACAGGGTATC+TGG + chr5.2:17831202-17831221 MS.gene84978:CDS 55.0%
! ATTTTGCAGCGGCCATCTGC+TGG + chr5.2:17831493-17831512 MS.gene84978:CDS 55.0%
!! ATCTGATCCTGAGGTGCTGC+AGG - chr5.2:17831475-17831494 None:intergenic 55.0%
!! CAGGTGCTTCATTTGGTGCC+CGG - chr5.2:17828103-17828122 None:intergenic 55.0%
!! GCAGGTGCTTCTTTTGGTGC+CGG - chr5.2:17829102-17829121 None:intergenic 55.0%
!!! CAGGTGCTTCTTTTGGTGCC+GGG - chr5.2:17829101-17829120 None:intergenic 55.0%
ACCTGAACAGTCTGCTGGGG+GGG + chr5.2:17831081-17831100 MS.gene84978:CDS 60.0%
AGACTGTCCTGCAGCACCTC+AGG + chr5.2:17831465-17831484 MS.gene84978:CDS 60.0%
ATGCCATCAACCCGGGGCTT+GGG + chr5.2:17831546-17831565 MS.gene84978:CDS 60.0%
CACCTGAACAGTCTGCTGGG+GGG + chr5.2:17831080-17831099 MS.gene84978:CDS 60.0%
CCACCTGAACAGTCTGCTGG+GGG + chr5.2:17831079-17831098 MS.gene84978:CDS 60.0%
CGGAGAGGCCTATGCCAACA+AGG + chr5.2:17831375-17831394 MS.gene84978:CDS 60.0%
GAGGGTGGCGAGGACATCAT+GGG + chr5.2:17830560-17830579 MS.gene84978:CDS 60.0%
GGAGGTGGCTGTCGGTACAT+AGG - chr5.2:17829402-17829421 None:intergenic 60.0%
GGCTGTCGGTACATAGGCTG+AGG - chr5.2:17829396-17829415 None:intergenic 60.0%
TTGTCCTCTCTCCCAAGCCC+CGG - chr5.2:17831560-17831579 None:intergenic 60.0%
! GCAGCCAACAGGGTATCTGG+TGG + chr5.2:17831205-17831224 MS.gene84978:CDS 60.0%
! GGTGGATCGGGTTGTGCTTC+AGG + chr5.2:17831223-17831242 MS.gene84978:CDS 60.0%
!! GCTTCATTTGGTGCCCGGAC+AGG - chr5.2:17828098-17828117 None:intergenic 60.0%
!! TGCTTTTCAGGAGGGTGGCG+AGG + chr5.2:17830550-17830569 MS.gene84978:CDS 60.0%
!!! GCTTCTTTTGGTGCCGGGAC+AGG - chr5.2:17829096-17829115 None:intergenic 60.0%
CAGCGGCCATCTGCTGGATC+AGG + chr5.2:17831499-17831518 MS.gene84978:CDS 65.0%
CCCCCAGCAGACTGTTCAGG+TGG - chr5.2:17831082-17831101 None:intergenic 65.0%
CGGCCATCTGCTGGATCAGG+TGG + chr5.2:17831502-17831521 MS.gene84978:CDS 65.0%
GATGCCATCAACCCGGGGCT+TGG + chr5.2:17831545-17831564 MS.gene84978:CDS 65.0%
GGAGGGTGGCGAGGACATCA+TGG + chr5.2:17830559-17830578 MS.gene84978:CDS 65.0%
TGTCCTCTCTCCCAAGCCCC+GGG - chr5.2:17831559-17831578 None:intergenic 65.0%
! TCTCCCAAGCCCCGGGTTGA+TGG - chr5.2:17831552-17831571 None:intergenic 65.0%
CAACCCGGGGCTTGGGAGAG+AGG + chr5.2:17831553-17831572 MS.gene84978:CDS 70.0%
GCCCCCCCAGCAGACTGTTC+AGG - chr5.2:17831085-17831104 None:intergenic 70.0%
TGGGGGGGCCTACGCCAACA+CGG + chr5.2:17831096-17831115 MS.gene84978:CDS 70.0%


Chromosome Type Strat End Strand Name
chr5.2 gene 17828068 17831780 17828068 ID=MS.gene84978
chr5.2 mRNA 17828068 17831780 17828068 ID=MS.gene84978.t1;Parent=MS.gene84978
chr5.2 exon 17828068 17828474 17828068 ID=MS.gene84978.t1.exon1;Parent=MS.gene84978.t1
chr5.2 CDS 17828068 17828474 17828068 ID=cds.MS.gene84978.t1;Parent=MS.gene84978.t1
chr5.2 exon 17829035 17831780 17829035 ID=MS.gene84978.t1.exon2;Parent=MS.gene84978.t1
chr5.2 CDS 17829035 17831780 17829035 ID=cds.MS.gene84978.t1;Parent=MS.gene84978.t1
Gene Sequence

>MS.gene84978

ATGGACAAATGTGACTTGATTGGAGAACCTGTCCGGGCACCAAATGAAGCACCTGCACAATCTGCTGTGAGTCATGCAGGAAATGTACAATCAGCTGCTGTTCAAATAGAAAGCACTGCTGAAAAAGCGGTTATGGCTGTGAATCTAACACAAGGTGCGATAATGAAGATGTGTTTCACGTCGGAGGGATTCCAACCAGTATTACAAGTTATTGATTTGAAGCTTTTGCAGTCGCAGCGAAATAGCACTACTGAAATGTACCAACTCGTTCTCTCCGATGGTTCATATTATAAACAAGGAACACTCTCTGTTCAGAAAAATAAGTTGATTCATTCTGGAAGGTTGCAGAAAGGTTCCATTGTTAAGCTCAATGAGTTCATCTGTAACGATGTTAATCAGAATCTCAAGTAAGTTTCTTCTTTTGCATTCCTTTGTTTTTTTTTTTCTTTTTTTTGATGTTTATGTTAATATAAAATGGTATGTGAAATTAGATGTTTTTATGTTAACTATGTATTGAAGGTGAATTATGGGTTTGTTATAATAATTTGAGAAAATGACATAACTTGGTGTTGGACACAGACACATGTTGGACACCGGATACGCCTTTCATCAAAAGTGTCAGGAGGGCTACATAGATAATTGATTTAAATTGAAGTTTACTATTTGAATTATTTGCAAGTCTGAGATTAAGATATCTCACCCAAAAAAAAATTTAATCTTGTTTTTGCATTTTAAGACTTGTGAATTTGAATACTTCAGCAGATTTTTGAAATGGTGGGGTGGTTATTTTATGATAGTTGAAGAATTTCATTAAAGGAGTTGTTGTTTCCTGTTAGTTTTTTAGTTTTGATATTGTTGAAGGCTTTATTAACCAATCGGAGGAAGTTTTACTACTCATTATAGCTTAATTGTTTCTAGCCTCTGTGCCAGTGATTGACAAATGATTTGCTTCTCGATTAACGAACAGAATTATCATCATTGTTGAGCTGGATGTTATACTTGACAAATGGGACTTGATTGGAAAACCTGTCCCGGCACCAAAAGAAGCACCTGCACAATCTGATGTGAGTCATGCAGGAGATGTACAATCAGCTGCTGGTCAATTAGGAAGCACTGCTGAAAATTCACAGTATTTGAACGGTGGTTCCTATGCAGCTGGCATTAATGATAGACCAAATGTGGCTGTGCCATCTATGGATCGTCCGACTGTGAATCCTTCAGCTAGCAGTGTTTATTCTAACACTTCTGGATCTGCAAGATACAGTACATCTGATGGAGCCAATTTGAATAGACCGGTGCCAGTCAATGGGTCTTATGTTCGTCCTCCTCAGCCTATGTACCGACAGCCACCTCCTATGTACACCAATAGAGGGCCTAAAGGAAGAAATGATGCTCCCCCAGCCCCAAGTATAATCCCAATATCTGCTTTGAATCCATATCAGAATATGTGGACAATTAAAGCCAGAATAACGGCTAAGCGAGAACTCAGGGTCTATAACAATGCCCGAGGTGAGGGAAAAGTATTTTCTTTTGATCTTTTGGATTCGGACGGTGGAGAAATACGGGCAACTTGCTTTAATGCCGTGGCTGATCAGTTCTATGATGTAACTGAAGTTGGTAGAGTCTATCTTGTTTCAAGGGGATATGTGAAGCCAGCTCAAAAGAATATCAATCACCTTCCTAATGATCAAGAGATAACCCTTGATATCACATCAGTTATACAACCATGTCTTGACGATGATAACTCAATTCCCCAGCAGATTTACAATTTCCGTCCCATTGGTGACATTGAAAGTATGGAAAGCAACAGCATTGTGGATGTGATTGCTGTGGTTACTGCTATCAGTCCTACAGCATCAATCATGAGAAAAAATGGCACTGAAACACAGAAGATATCTCTCCAGTTGAAAGACATGTCTGGCCGAAGTGTTGAATTAACTGTATGGGGGAGTTTTTGCAATACGGAAGGACAAAAGCTGCAAAATATTTGCGACTCTGGGGCATTTCCAATTTTGGTTGTAAAATCTGCCAGAGTAAATGACTTCAATGGGAAGTCTATTGGGACCATTGCCACCAGCCAATTATTGGTAGAACCTGATTTTCCAGAGGCTTTTACACTGAGAGGATGGTTTGACCAGGAAGGGAGGAATGTCCCAAGTCAATCTATTTTCAGAGAATCATCTAGTTTTGGTAAAAGTGAAGTGCGGAAGACTATATCTCAAATTAAAGATGAAAAGTTAGGGACTTCTGAGAAGCCTGATTGGATATCTATCTGTGCAAGTGTTGCATTTGTTAAAGTTGATAATTTTTGTTACACAGCTTGTCCTATCATGATAGGAGATAGGAAATGTAACAAAAAGGTTACCCTTAATGGAGATGGGAAATGGCGCTGTGAAAGGTGTGATAAGTCTGTTGATGCTTGTGATTATAGGTACTTACTGCAAATGCAGATAGATGATCACACTGGAATGACTTGGGTTACTGCTTTTCAGGAGGGTGGCGAGGACATCATGGGTATGCCGGCAAAAGATTTGCATTTTCTGAAATTTGAAGAACAAGAAAAATTTGCAGAAATCATCCGTAAGGTTCTCTTCACTGAATATGTGTTCAAGTTAAAAGTAAAAGAGGAGACGTTCAATGGCGAACCATGTGTTAAGTCAACTCTACTAAAAGCAGAGAAGGTTAACTTTGCATCTAAGTCCAAATCACTTCTGGATTTGATCGAGAAGCATAAGTCTGAGAAAGCAGAAGGCACCACTATCAACTCTGTGATCACCAAAACTGGACTGGGAAGCCTTGAGACTAGACAAGCTACATCACAGGTATGTAGTCCTATAAAGATCAACACTAATAGCGGAAGAGATTATGGGACATCAGTAAATCAAGTGAGTCGGTATGGAAACCAATATAGTAGTTCTTTTGCTTCATCAGGTGCTCTTGGTTCATATATGTCATGCAGCAATTTTGGAGGCTCTGATCATAGCTCTGCACAATGCCTACATCTTAGAAATCCACCTGAACAGTCTGCTGGGGGGGCCTACGCCAACACGGTGTCTGTTGGATCAGGTGGTGCTTCGGGTAATTGCTATAAATGCCAACAACCTGGACATTGGGCGAACAACTGTCCTAGTATGAGTGCAGCCAACAGGGTATCTGGTGGATCGGGTTGTGCTTCAGGTAATTGCTATAAATGCCAACAACCTGGACATTGGGCGAACAACTGTCCTTATATGAGAGCAGCACCTCAGTCTTATGGAAACTGTAATGCAGGGCAAGGAAGATATGGTATTTCTCGAAATCAGTCTACCGGAGAGGCCTATGCCAACAAGGTTTCTGGTGAATCAGGTGGTGCTTCGGGTAATTGCTATAGATGGCAGCATATTGGACATTGGGCAAGAGACTGTCCTGCAGCACCTCAGGATCAGATTTTGCAGCGGCCATCTGCTGGATCAGGTGGTGTTTCTGGTGAGTGCTATAGATGCCATCAACCCGGGGCTTGGGAGAGAGGACAAAAGCTGAAAAGTATTTGCGAGCCTGGAGCATTTTCAATTTTGGTTGTAAAACCTGCCAGAGTAAATGATTTCAATGGGAAGTCTGTTGGCATCAATTTTGTTAAAGTTGATAATATTTGCGACACAAATATGCTGATGAGAATCATATGGGGATTTGGTTTTGGTATTCTCCTCCTGATGGCCTTCTTGTGCTTTTGCTAG
Protein sequence

>MS.gene84978.t1

MDKCDLIGEPVRAPNEAPAQSAVSHAGNVQSAAVQIESTAEKAVMAVNLTQGAIMKMCFTSEGFQPVLQVIDLKLLQSQRNSTTEMYQLVLSDGSYYKQGTLSVQKNKLIHSGRLQKGSIVKLNEFICNDVNQNLKIIIIVELDVILDKWDLIGKPVPAPKEAPAQSDVSHAGDVQSAAGQLGSTAENSQYLNGGSYAAGINDRPNVAVPSMDRPTVNPSASSVYSNTSGSARYSTSDGANLNRPVPVNGSYVRPPQPMYRQPPPMYTNRGPKGRNDAPPAPSIIPISALNPYQNMWTIKARITAKRELRVYNNARGEGKVFSFDLLDSDGGEIRATCFNAVADQFYDVTEVGRVYLVSRGYVKPAQKNINHLPNDQEITLDITSVIQPCLDDDNSIPQQIYNFRPIGDIESMESNSIVDVIAVVTAISPTASIMRKNGTETQKISLQLKDMSGRSVELTVWGSFCNTEGQKLQNICDSGAFPILVVKSARVNDFNGKSIGTIATSQLLVEPDFPEAFTLRGWFDQEGRNVPSQSIFRESSSFGKSEVRKTISQIKDEKLGTSEKPDWISICASVAFVKVDNFCYTACPIMIGDRKCNKKVTLNGDGKWRCERCDKSVDACDYRYLLQMQIDDHTGMTWVTAFQEGGEDIMGMPAKDLHFLKFEEQEKFAEIIRKVLFTEYVFKLKVKEETFNGEPCVKSTLLKAEKVNFASKSKSLLDLIEKHKSEKAEGTTINSVITKTGLGSLETRQATSQVCSPIKINTNSGRDYGTSVNQVSRYGNQYSSSFASSGALGSYMSCSNFGGSDHSSAQCLHLRNPPEQSAGGAYANTVSVGSGGASGNCYKCQQPGHWANNCPSMSAANRVSGGSGCASGNCYKCQQPGHWANNCPYMRAAPQSYGNCNAGQGRYGISRNQSTGEAYANKVSGESGGASGNCYRWQHIGHWARDCPAAPQDQILQRPSAGSGGVSGECYRCHQPGAWERGQKLKSICEPGAFSILVVKPARVNDFNGKSVGINFVKVDNICDTNMLMRIIWGFGFGILLLMAFLCFC