AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene89026

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene89026.t1 MTR_2g103730 98.764 809 10 0 1 809 1 809 0.0 1665
MS.gene89026.t1 MTR_4g010650 86.156 809 111 1 1 809 1 808 0.0 1484
MS.gene89026.t1 MTR_3g107320 64.354 836 254 11 5 809 4 826 0.0 1080
MS.gene89026.t1 MTR_3g107360 63.043 828 274 11 5 809 4 822 0.0 1061
MS.gene89026.t1 MTR_7g075910 46.368 826 392 16 4 797 297 1103 0.0 735
MS.gene89026.t1 MTR_5g011050 45.738 833 388 17 4 797 36 843 0.0 731
MS.gene89026.t1 MTR_8g033080 45.933 836 392 17 1 797 224 1038 0.0 731
MS.gene89026.t1 MTR_5g011060 45.134 822 403 17 4 797 36 837 0.0 714
MS.gene89026.t1 MTR_5g023050 46.278 806 368 14 50 809 86 872 0.0 713
MS.gene89026.t1 MTR_8g088690 45.476 851 398 20 4 809 13 842 0.0 704
MS.gene89026.t1 MTR_3g114840 44.406 858 412 18 2 809 9 851 0.0 699
MS.gene89026.t1 MTR_2g100250 44.760 811 384 19 5 809 4 756 0.0 651
MS.gene89026.t1 MTR_3g114840 42.911 797 382 18 2 739 9 791 0.0 608
MS.gene89026.t1 MTR_8g016160 41.892 814 389 23 5 809 7 745 0.0 587
MS.gene89026.t1 MTR_8g033080 44.984 618 297 12 1 590 224 826 4.59e-174 523
MS.gene89026.t1 MTR_1g083620 33.473 239 122 9 498 726 477 688 2.00e-23 107
MS.gene89026.t1 MTR_1g083620 28.696 230 119 9 211 427 127 324 6.76e-15 79.3
MS.gene89026.t1 MTR_1g083620 33.473 239 122 9 498 726 737 948 2.37e-23 107
MS.gene89026.t1 MTR_1g083620 28.696 230 119 9 211 427 387 584 4.62e-15 80.1
MS.gene89026.t1 MTR_2g435560 30.645 248 134 8 457 693 600 820 1.23e-18 91.7
MS.gene89026.t1 MTR_2g435560 26.641 259 135 11 211 449 253 476 2.31e-14 77.8
MS.gene89026.t1 MTR_2g435560 31.325 249 131 10 457 693 735 955 1.32e-18 91.7
MS.gene89026.t1 MTR_2g435560 26.641 259 135 11 211 449 388 611 2.01e-14 78.2
MS.gene89026.t1 MTR_5g023040 51.389 72 31 1 324 395 806 873 3.59e-18 90.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene89026.t1 AT3G15730 80.689 813 150 2 1 809 1 810 0.0 1399
MS.gene89026.t1 AT1G52570 79.162 811 166 3 1 809 1 810 0.0 1363
MS.gene89026.t1 AT1G52570 79.162 811 166 3 1 809 1 810 0.0 1363
MS.gene89026.t1 AT1G52570 79.162 811 166 3 1 809 1 810 0.0 1363
MS.gene89026.t1 AT5G25370 62.107 826 285 10 3 809 4 820 0.0 1038
MS.gene89026.t1 AT5G25370 62.107 826 285 10 3 809 4 820 0.0 1038
MS.gene89026.t1 AT5G25370 62.107 826 285 10 3 809 4 820 0.0 1038
MS.gene89026.t1 AT5G25370 65.188 744 250 6 72 809 5 745 0.0 1004
MS.gene89026.t1 AT2G42010 45.742 822 400 16 4 797 269 1072 0.0 737
MS.gene89026.t1 AT2G42010 44.668 844 402 16 4 797 269 1097 0.0 730
MS.gene89026.t1 AT4G00240 45.910 819 403 16 4 797 113 916 0.0 726
MS.gene89026.t1 AT4G00240 47.416 774 373 14 44 797 122 881 0.0 723
MS.gene89026.t1 AT4G00240 47.416 774 373 14 44 797 5 764 0.0 723
MS.gene89026.t1 AT4G11830 45.048 828 405 18 5 797 33 845 0.0 713
MS.gene89026.t1 AT4G11830 46.410 780 377 17 44 797 49 813 0.0 707
MS.gene89026.t1 AT4G11840 44.565 828 409 17 5 797 43 855 0.0 706
MS.gene89026.t1 AT4G11850 44.782 824 409 16 5 797 39 847 0.0 704
MS.gene89026.t1 AT4G11840 44.256 827 383 17 5 797 43 825 0.0 691
MS.gene89026.t1 AT4G35790 45.330 803 379 18 46 809 76 857 0.0 673
MS.gene89026.t1 AT4G35790 44.963 814 377 19 46 809 76 868 0.0 667
MS.gene89026.t1 AT1G55180 40.465 818 408 19 6 809 10 762 0.0 587
MS.gene89026.t1 AT1G55180 41.505 771 391 17 50 809 19 740 0.0 587
MS.gene89026.t1 AT4G35790 45.219 617 290 13 46 627 76 679 6.90e-173 515
MS.gene89026.t1 AT4G11830 44.007 609 304 12 5 590 33 627 2.37e-168 501
MS.gene89026.t1 AT4G11830 43.740 599 300 12 5 580 33 617 3.42e-164 491
MS.gene89026.t1 AT3G05630 27.199 614 288 27 208 725 372 922 4.80e-31 131
MS.gene89026.t1 AT3G16785 34.975 203 98 8 497 693 756 930 5.13e-19 93.2
MS.gene89026.t1 AT3G16785 28.514 249 123 9 221 449 390 603 5.54e-15 80.1
MS.gene89026.t1 AT3G16785 34.975 203 98 8 497 693 756 930 5.13e-19 93.2
MS.gene89026.t1 AT3G16785 28.514 249 123 9 221 449 390 603 5.54e-15 80.1
MS.gene89026.t1 AT3G16785 34.975 203 98 8 497 693 756 930 5.25e-19 92.8
MS.gene89026.t1 AT3G16785 30.045 223 105 8 221 427 390 577 5.86e-15 79.7
MS.gene89026.t1 AT3G16785 34.975 203 98 8 497 693 756 930 5.25e-19 92.8
MS.gene89026.t1 AT3G16785 30.045 223 105 8 221 427 390 577 5.86e-15 79.7
MS.gene89026.t1 AT3G16785 34.975 203 98 8 497 693 756 930 5.30e-19 93.2
MS.gene89026.t1 AT3G16785 28.514 249 123 9 221 449 390 603 5.45e-15 80.1
MS.gene89026.t1 AT3G16785 34.975 203 98 8 497 693 756 930 5.99e-19 92.8
MS.gene89026.t1 AT3G16785 28.514 249 123 9 221 449 390 603 5.49e-15 80.1

Find 247 sgRNAs with CRISPR-Local

Find 383 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTAATGCATTCTTCACTTTC+TGG 0.019872 2.4:+1859164 None:intergenic
GCCTGAACTGATGCACTTTC+TGG 0.110790 2.4:+1860290 None:intergenic
CCTATTGGGGCAACCTTAAT+TGG 0.143828 2.4:-1861727 MS.gene89026:CDS
GAATCAGGTTCTGGTCTTTC+AGG 0.151953 2.4:+1860113 None:intergenic
TACTCATCATCAGAAAATTT+TGG 0.198426 2.4:-1861038 MS.gene89026:CDS
ATCTTAAGTGAAAGCTCTTT+TGG 0.217956 2.4:+1860383 None:intergenic
TTGACGGTGGAGCAGCTTTC+GGG 0.225952 2.4:-1860616 MS.gene89026:CDS
CCTGGTGCTTCAATAGAAAA+AGG 0.253077 2.4:-1860851 MS.gene89026:CDS
GACACCAAGGCTCGTGTTCT+TGG 0.259989 2.4:-1858993 MS.gene89026:CDS
ACCTCCTGCAAGTTGTATAT+TGG 0.269725 2.4:+1861438 None:intergenic
ACCTTCTCCGCTATCCCATT+GGG 0.270807 2.4:-1859067 MS.gene89026:CDS
TAAGGAACTCCAGGAAATTT+AGG 0.271707 2.4:+1861535 None:intergenic
ATCTTTGAATTTCCATGAAT+TGG 0.275511 2.4:+1861622 None:intergenic
ACCAGATTGCTGACAAATAT+TGG 0.280067 2.4:-1859133 MS.gene89026:CDS
TTAGGGTATTAATGCTTGTT+TGG 0.281535 2.4:-1861228 MS.gene89026:CDS
ACGAAACTAAGTAGTAAGTA+TGG 0.282199 2.4:+1858947 None:intergenic
AGATAGGTGGGTTGAAATAT+TGG 0.293912 2.4:-1861659 MS.gene89026:CDS
ATGTTTCAAAAGACCGCAAC+TGG 0.294096 2.4:-1861576 MS.gene89026:CDS
ATTGACGGTGGAGCAGCTTT+CGG 0.298826 2.4:-1860617 MS.gene89026:CDS
TAGCACCATCCATTGATCTT+TGG 0.299079 2.4:+1859324 None:intergenic
TGGTGCCAATTTCTATATTC+TGG 0.302016 2.4:+1861065 None:intergenic
CCATGAATCTGACCCCTTGC+AGG 0.320797 2.4:+1859245 None:intergenic
TAATGCATTCTTCACTTTCT+GGG 0.323254 2.4:+1859165 None:intergenic
GTGAAAGATGATAATCCTAT+TGG 0.323636 2.4:-1861742 MS.gene89026:CDS
ATCAATGGTTGCATAAAGTT+TGG 0.323808 2.4:+1861882 None:intergenic
CCTCCTGCAAGTTGTATATT+GGG 0.327612 2.4:+1861439 None:intergenic
CCAATTAAGGTTGCCCCAAT+AGG 0.334639 2.4:+1861727 None:intergenic
TTTCATCAGCCTAACTTTCC+TGG 0.335279 2.4:-1860869 MS.gene89026:CDS
CCAGCTTTAGCAGCATCTTC+AGG 0.337228 2.4:+1860581 None:intergenic
TTATTTAATCCCACTTCATT+TGG 0.342886 2.4:+1860998 None:intergenic
GTCCCCAATATACAACTTGC+AGG 0.343312 2.4:-1861442 MS.gene89026:CDS
AACCCTATCATTTAGCTAAT+AGG 0.346495 2.4:-1859271 MS.gene89026:CDS
TGATCATCAGGGAAAGTTAC+TGG 0.348678 2.4:+1860671 None:intergenic
CCCAATATTTGTCAGCAATC+TGG 0.350230 2.4:+1859132 None:intergenic
TGAAAGATGATAATCCTATT+GGG 0.352247 2.4:-1861741 MS.gene89026:CDS
CTGCCTATTAGCTAAATGAT+AGG 0.357619 2.4:+1859268 None:intergenic
TACTGGGGATGGGGTAATAA+TGG 0.358885 2.4:+1860688 None:intergenic
TCACATTTACTGTGCCCATT+TGG 0.361006 2.4:-1861785 MS.gene89026:CDS
CATTCCTGTTGAGGAGGTAT+TGG 0.363727 2.4:-1861695 MS.gene89026:CDS
CACCTTCTCCGCTATCCCAT+TGG 0.367992 2.4:-1859068 MS.gene89026:CDS
CCTGCAAGGGGTCAGATTCA+TGG 0.370010 2.4:-1859245 MS.gene89026:CDS
AGGCACTTAATATACATTAC+AGG 0.372424 2.4:-1861358 MS.gene89026:CDS
ATTGTCCAGAATATAGAAAT+TGG 0.374763 2.4:-1861070 MS.gene89026:CDS
AATGTACGCCCTTCCAATTA+AGG 0.374946 2.4:+1861714 None:intergenic
CCTGAACTGATGCACTTTCT+GGG 0.377490 2.4:+1860291 None:intergenic
ATTCCTGTTGAGGAGGTATT+GGG 0.378380 2.4:-1861694 MS.gene89026:CDS
TAGGGTATTAATGCTTGTTT+GGG 0.385598 2.4:-1861227 MS.gene89026:CDS
CTCTGTCACGCTTCCTTCAC+TGG 0.390332 2.4:+1859040 None:intergenic
CCCAGAAAGTGCATCAGTTC+AGG 0.391340 2.4:-1860291 MS.gene89026:CDS
CACACAAAGACAAGGTTGTA+AGG 0.391884 2.4:-1861503 MS.gene89026:CDS
GCTAAAGCTGGGCTTATTAG+TGG 0.392386 2.4:-1860569 MS.gene89026:CDS
ATTAGAAGTCCTAAATTTCC+TGG 0.394374 2.4:-1861544 MS.gene89026:CDS
GTGATGTCTCCTCCTGGCTT+TGG 0.396802 2.4:+1861289 None:intergenic
AGAACACGAGCCTTGGTGTC+AGG 0.406228 2.4:+1858996 None:intergenic
GGCTTGAAGGTCCCATTGCT+TGG 0.410425 2.4:-1860793 MS.gene89026:CDS
CAGAAAGTGAAGAATGCATT+AGG 0.410724 2.4:-1859163 MS.gene89026:CDS
TTCCACGTCTCTTGATCATC+AGG 0.411607 2.4:+1860659 None:intergenic
TGCAAAGCACCAATGTCTTC+AGG 0.412451 2.4:+1860413 None:intergenic
GTGAATAAAGAACCAATTCA+TGG 0.418317 2.4:-1861634 MS.gene89026:CDS
CCAGATTGCTGACAAATATT+GGG 0.419715 2.4:-1859132 MS.gene89026:CDS
CCTGAAGATGCTGCTAAAGC+TGG 0.422903 2.4:-1860581 MS.gene89026:CDS
TCTTCATGCTACAATCTTTG+AGG 0.430433 2.4:-1863695 MS.gene89026:CDS
TGTCTTATGCCCTCGCAATC+CGG 0.432330 2.4:-1861107 MS.gene89026:CDS
TTACTTACCTATCATCATCT+TGG 0.432761 2.4:+1860040 None:intergenic
TTCGGAAAAGTGAATGAAAC+GGG 0.434688 2.4:+1860918 None:intergenic
TTTGAGGAGACAGTTGGATT+CGG 0.439825 2.4:-1861916 MS.gene89026:CDS
CTTTGTGTGTAGAAAGCATA+AGG 0.440268 2.4:+1861517 None:intergenic
ATACTGAGATTTCCTTGGTA+AGG 0.443762 2.4:-1861324 MS.gene89026:CDS
ATTGAAGCACCAGGAAAGTT+AGG 0.444896 2.4:+1860860 None:intergenic
ATATAATCTGAATCAGGTTC+TGG 0.445716 2.4:+1860104 None:intergenic
ATTGAAAATCAATATTTCCT+TGG 0.448120 2.4:-1860470 MS.gene89026:CDS
TTTCCTTGGTAAGGGATTCA+AGG 0.448128 2.4:-1861315 MS.gene89026:CDS
GGAAGGATAACATAATAGAT+AGG 0.450815 2.4:-1860547 MS.gene89026:CDS
GTTCATGCCAAGATGATGAT+AGG 0.452461 2.4:-1860047 MS.gene89026:intron
ATTGTTAGCAAGATTGAAGC+TGG 0.453049 2.4:-1860362 MS.gene89026:CDS
CAAAACTTTGAGGAGACAGT+TGG 0.453252 2.4:-1861922 MS.gene89026:CDS
TTAGATAAGACAAAACTTTG+AGG 0.453476 2.4:-1861932 MS.gene89026:intron
TATTTGTCGTTCTTCTGCCT+TGG 0.457729 2.4:-1860173 MS.gene89026:CDS
GATATCCACTCAAGGCTTGA+AGG 0.460473 2.4:-1860806 MS.gene89026:CDS
AGCAGCATCTTCAGGAGTCT+CGG 0.461063 2.4:+1860589 None:intergenic
CCACCCAATACCTCCTCAAC+AGG 0.461488 2.4:+1861691 None:intergenic
GCAGCATCTTCAGGAGTCTC+GGG 0.461536 2.4:+1860590 None:intergenic
TCGTGCTTTCTCTAAATCAA+TGG 0.461965 2.4:+1861867 None:intergenic
GCTTGAAGGTCCCATTGCTT+GGG 0.466265 2.4:-1860792 MS.gene89026:CDS
TGTTTATACTGAGATTTCCT+TGG 0.470042 2.4:-1861329 MS.gene89026:CDS
CATTGATCTTTGGTTGATGT+TGG 0.471677 2.4:+1859334 None:intergenic
TCCGCCAAGAACACGAGCCT+TGG 0.472706 2.4:+1858989 None:intergenic
GCTCGCATATAATCTGAATC+AGG 0.474750 2.4:+1860098 None:intergenic
GGATAGCGGAGAAGGTGGCC+AGG 0.478302 2.4:+1859074 None:intergenic
CCCATTGGGGTTTCCAGTGA+AGG 0.480016 2.4:-1859053 MS.gene89026:CDS
ATATTGGGGACAAAATTGTC+TGG 0.480142 2.4:+1861454 None:intergenic
CAGGGAAAGTTACTGGGGAT+GGG 0.481757 2.4:+1860678 None:intergenic
TACTGAGATTTCCTTGGTAA+GGG 0.486700 2.4:-1861323 MS.gene89026:CDS
GCACTTTCTGGGACACCCTC+AGG 0.486846 2.4:+1860302 None:intergenic
ATATGATATCCGATGCCAAA+TGG 0.487948 2.4:+1861770 None:intergenic
AGCTAATAGGCAGCCTGCAA+GGG 0.491417 2.4:-1859258 MS.gene89026:CDS
TATGATATCCGATGCCAAAT+GGG 0.492675 2.4:+1861771 None:intergenic
AGGAGCATGTTAATCCTCAA+TGG 0.492749 2.4:-1861819 MS.gene89026:CDS
AGATTATATGCGAGCTCAAG+AGG 0.493595 2.4:-1860090 MS.gene89026:CDS
AGGATCTTCCTCAATTCCCT+TGG 0.495088 2.4:+1860202 None:intergenic
AACAAAACATCCCAAGCAAT+GGG 0.497488 2.4:+1860782 None:intergenic
AAAGACCGCAACTGGGCTCT+AGG 0.498162 2.4:-1861568 MS.gene89026:CDS
CCCCAATGGGATAGCGGAGA+AGG 0.498169 2.4:+1859066 None:intergenic
GAGACAGTTGGATTCGGAAA+AGG 0.499116 2.4:-1861910 MS.gene89026:CDS
TGTTTAACTTTGAGCAGAGA+TGG 0.499268 2.4:-1860763 MS.gene89026:CDS
GATCATCAGGGAAAGTTACT+GGG 0.499638 2.4:+1860672 None:intergenic
TCAGGGAAAGTTACTGGGGA+TGG 0.501750 2.4:+1860677 None:intergenic
CTTACCAGCCTCATAGATGT+TGG 0.502263 2.4:-1861411 MS.gene89026:CDS
CCAAGTGTGATGTCTCCTCC+TGG 0.503968 2.4:+1861283 None:intergenic
CAGCTATTTAGATCTATTGA+CGG 0.506424 2.4:-1860632 MS.gene89026:CDS
TCCTTCACTGGAAACCCCAA+TGG 0.508775 2.4:+1859052 None:intergenic
TAGCTAATAGGCAGCCTGCA+AGG 0.513603 2.4:-1859259 MS.gene89026:CDS
TTCACTTTCTGGGTGAAGGA+AGG 0.516269 2.4:+1859175 None:intergenic
AGAGACTCTGAAATTGCAAT+GGG 0.517579 2.4:-1859302 MS.gene89026:CDS
AGGGAAAGTTACTGGGGATG+GGG 0.517899 2.4:+1860679 None:intergenic
GATAAACTCAAGAATATTAG+TGG 0.518555 2.4:-1863670 MS.gene89026:CDS
TTACCAGCCTCATAGATGTT+GGG 0.519232 2.4:-1861410 MS.gene89026:CDS
GATTCAAGGAGGCCAAAGCC+AGG 0.523097 2.4:-1861301 MS.gene89026:CDS
TCAGGGAAGAATTCAAATCC+TGG 0.524099 2.4:+1859014 None:intergenic
TAGAAAGCATAAGGAACTCC+AGG 0.524275 2.4:+1861526 None:intergenic
ACAATGCTTCCACCATCATC+CGG 0.527676 2.4:+1861088 None:intergenic
ATGGAGGAAGCAAGGTGGAA+AGG 0.528791 2.4:-1860744 MS.gene89026:CDS
ACTCAATGCCAAGGGAATTG+AGG 0.529142 2.4:-1860210 MS.gene89026:CDS
TGGTGGTAACATTCTTTCCA+AGG 0.530172 2.4:-1863650 MS.gene89026:intron
TGCCCTCGCAATCCGGATGA+TGG 0.530747 2.4:-1861100 MS.gene89026:CDS
ATTCTTCACTTTCTGGGTGA+AGG 0.535092 2.4:+1859171 None:intergenic
AAGGACCAGAATCATAGAAA+AGG 0.537043 2.4:-1861839 MS.gene89026:CDS
TTGGGGCAACCTTAATTGGA+AGG 0.538056 2.4:-1861723 MS.gene89026:CDS
AACATAAATCATGAAACGCC+TGG 0.540335 2.4:+1860067 None:intergenic
CCTCCCAACATCTATGAGGC+TGG 0.541750 2.4:+1861407 None:intergenic
ACCAAGGCTCGTGTTCTTGG+CGG 0.542154 2.4:-1858990 MS.gene89026:CDS
ACATCCTCCCAACATCTATG+AGG 0.542285 2.4:+1861403 None:intergenic
CAACATCAACCAAAGATCAA+TGG 0.542537 2.4:-1859333 MS.gene89026:CDS
ACTCTTGAGCATGATCTCCC+TGG 0.542825 2.4:-1859092 MS.gene89026:CDS
CCACCATCATCCGGATTGCG+AGG 0.547386 2.4:+1861097 None:intergenic
CTAAAGCTGGGCTTATTAGT+GGG 0.547451 2.4:-1860568 MS.gene89026:CDS
ATATGCGAGCTCAAGAGGCC+AGG 0.547877 2.4:-1860085 MS.gene89026:CDS
CACAGTGCACTTCAGAGCCT+CGG 0.549999 2.4:+1861128 None:intergenic
GAACACGAGCCTTGGTGTCA+GGG 0.550469 2.4:+1858997 None:intergenic
GTGGTTCCCATGTGGCCTGA+GGG 0.550831 2.4:-1860317 MS.gene89026:CDS
CTGAAGATGCTGCTAAAGCT+GGG 0.551525 2.4:-1860580 MS.gene89026:CDS
AACTAAGTAGTAAGTATGGG+TGG 0.551950 2.4:+1858951 None:intergenic
TGTCTGGGATATGAGAATCT+TGG 0.552039 2.4:+1861470 None:intergenic
TCAGGTTCTGGTCTTTCAGG+AGG 0.552348 2.4:+1860116 None:intergenic
AAAAGCACAAGAAGGTGTTA+GGG 0.552796 2.4:-1861245 MS.gene89026:CDS
CAGTTCAGGCAATATTAGAC+TGG 0.553731 2.4:-1860277 MS.gene89026:CDS
ATGGCGCAAATTCTGCTACA+TGG 0.553894 2.4:-1863721 MS.gene89026:CDS
CCTTCACTGGAAACCCCAAT+GGG 0.554387 2.4:+1859053 None:intergenic
TGAAAAGACTCATTCCATTG+AGG 0.555517 2.4:+1861805 None:intergenic
TTACTGTGCCCATTTGGCAT+CGG 0.556368 2.4:-1861779 MS.gene89026:CDS
AAGGTGGTCCTAGGGAACCT+TGG 0.556879 2.4:-1860832 MS.gene89026:CDS
GTTCGGAAAAGTGAATGAAA+CGG 0.557902 2.4:+1860917 None:intergenic
AAACAAAACATCCCAAGCAA+TGG 0.559086 2.4:+1860781 None:intergenic
TATTGAAGCACTCAATGCCA+AGG 0.561553 2.4:-1860219 MS.gene89026:CDS
CGAAACTAAGTAGTAAGTAT+GGG 0.562276 2.4:+1858948 None:intergenic
GCAAGATTGAAGCTGGGGAA+AGG 0.562968 2.4:-1860355 MS.gene89026:CDS
TGCCTATTAGCTAAATGATA+GGG 0.565055 2.4:+1859269 None:intergenic
ATATCATGCCAAGGTTCCCT+AGG 0.565440 2.4:+1860824 None:intergenic
TGGTGAGGAAATAGATAGGT+GGG 0.565449 2.4:-1861671 MS.gene89026:CDS
TCCTTGGAAGTTGCTATGCG+TGG 0.566885 2.4:-1860454 MS.gene89026:CDS
GATGTGCTGTGTCCAGAGTT+CGG 0.567045 2.4:+1860900 None:intergenic
TTGTTAGCAAGATTGAAGCT+GGG 0.569020 2.4:-1860361 MS.gene89026:CDS
AGCTGGGCTTATTAGTGGGA+AGG 0.572547 2.4:-1860564 MS.gene89026:CDS
GGAAGCGTGACAGAGCTGCC+AGG 0.573645 2.4:-1859032 MS.gene89026:CDS
GAGCAGAGATGGAGGAAGCA+AGG 0.573687 2.4:-1860752 MS.gene89026:CDS
CACCATCATCCGGATTGCGA+GGG 0.575824 2.4:+1861098 None:intergenic
TAGAGACTCTGAAATTGCAA+TGG 0.576832 2.4:-1859303 MS.gene89026:CDS
AGGCAATATTAGACTGGCAG+AGG 0.578738 2.4:-1860271 MS.gene89026:CDS
CAATATTAGACTGGCAGAGG+AGG 0.580334 2.4:-1860268 MS.gene89026:CDS
CCTTCTCCGCTATCCCATTG+GGG 0.580634 2.4:-1859066 MS.gene89026:CDS
TGGGACACCCTCAGGCCACA+TGG 0.580916 2.4:+1860310 None:intergenic
CCAGGAGGAGACATCACACT+TGG 0.582493 2.4:-1861283 MS.gene89026:CDS
TATTGGGGACAAAATTGTCT+GGG 0.586684 2.4:+1861455 None:intergenic
TTGATGCAATCACAAAAGCA+AGG 0.590614 2.4:-1861378 MS.gene89026:CDS
TGGGGCAACCTTAATTGGAA+GGG 0.592393 2.4:-1861722 MS.gene89026:CDS
TGCTATGCGTGGAGTGCTGA+TGG 0.592466 2.4:-1860443 MS.gene89026:CDS
TAGAGAAAGCACGAGTGGGA+AGG 0.593690 2.4:-1861858 MS.gene89026:CDS
AAGGGCGTACATTCCTGTTG+AGG 0.595296 2.4:-1861704 MS.gene89026:CDS
GATGATGAATACATAATCGT+CGG 0.596091 2.4:-1859362 MS.gene89026:CDS
GATAGCGGAGAAGGTGGCCA+GGG 0.597233 2.4:+1859075 None:intergenic
TGGGTGGTGAGGAAATAGAT+AGG 0.598716 2.4:-1861675 MS.gene89026:CDS
CAGTGAGTTGCCAAATGAAG+TGG 0.600965 2.4:-1861008 MS.gene89026:CDS
TGGGACCTTCAAGCCTTGAG+TGG 0.600994 2.4:+1860801 None:intergenic
CTGCCTTGGCAATCGTGAGG+TGG 0.601677 2.4:-1860159 MS.gene89026:CDS
CAATGGGATAGCGGAGAAGG+TGG 0.603242 2.4:+1859069 None:intergenic
AAGTGAAGAATGCATTAGGA+AGG 0.603278 2.4:-1859159 MS.gene89026:CDS
TGTTAGCAAGATTGAAGCTG+GGG 0.605624 2.4:-1860360 MS.gene89026:CDS
ACTAAGTAGTAAGTATGGGT+GGG 0.609032 2.4:+1858952 None:intergenic
GATTTAGAGAAAGCACGAGT+GGG 0.609235 2.4:-1861862 MS.gene89026:CDS
TGTGGTTCCCATGTGGCCTG+AGG 0.610251 2.4:-1860318 MS.gene89026:CDS
AATCGTGAGGTGGTAAAACA+AGG 0.614433 2.4:-1860149 MS.gene89026:CDS
AAGTAGTAAGTATGGGTGGG+AGG 0.614752 2.4:+1858955 None:intergenic
CTCCTGCAAGTTGTATATTG+GGG 0.614898 2.4:+1861440 None:intergenic
AGGTTTCTTGAAGCATGCCA+AGG 0.615494 2.4:+1859195 None:intergenic
GAAAGATGATAATCCTATTG+GGG 0.615615 2.4:-1861740 MS.gene89026:CDS
TGAGGAGGTATTGGGTGGTG+AGG 0.615634 2.4:-1861686 MS.gene89026:CDS
CAGAGATGGAGGAAGCAAGG+TGG 0.616614 2.4:-1860749 MS.gene89026:CDS
GGCGTACATTCCTGTTGAGG+AGG 0.617287 2.4:-1861701 MS.gene89026:CDS
TCCACGCATAGCAACTTCCA+AGG 0.620565 2.4:+1860453 None:intergenic
GGAGGCATTGATCTCTGTGA+TGG 0.621298 2.4:-1860953 MS.gene89026:CDS
CTTCTGCCTTGGCAATCGTG+AGG 0.622625 2.4:-1860162 MS.gene89026:CDS
GGGACACCCTCAGGCCACAT+GGG 0.624478 2.4:+1860311 None:intergenic
GCTTTCTACACACAAAGACA+AGG 0.625992 2.4:-1861511 MS.gene89026:CDS
GGCACTTAATATACATTACA+GGG 0.626213 2.4:-1861357 MS.gene89026:CDS
TGATTTAGAGAAAGCACGAG+TGG 0.626791 2.4:-1861863 MS.gene89026:CDS
TACTCATGATCAAGAAACTG+AGG 0.627462 2.4:-1861158 MS.gene89026:CDS
TGAATTCTTCCCTGACACCA+AGG 0.627778 2.4:-1859006 MS.gene89026:CDS
AGGGAATTGAGGAAGATCCT+CGG 0.629175 2.4:-1860199 MS.gene89026:CDS
TGGAAACCCCAATGGGATAG+CGG 0.631998 2.4:+1859060 None:intergenic
CTTGGCATGATATCCACTCA+AGG 0.633068 2.4:-1860814 MS.gene89026:CDS
ATGGTTTCCGCATGTCGTTG+TGG 0.633145 2.4:-1859226 MS.gene89026:CDS
GCTAATAGGCAGCCTGCAAG+GGG 0.633258 2.4:-1859257 MS.gene89026:CDS
AGTGAGTTGCCAAATGAAGT+GGG 0.635597 2.4:-1861007 MS.gene89026:CDS
GGTATTAAGCCTGAAGACAT+TGG 0.635944 2.4:-1860422 MS.gene89026:CDS
AAACTCAAGAATATTAGTGG+TGG 0.636100 2.4:-1863667 MS.gene89026:CDS
CTATTTAGATCTATTGACGG+TGG 0.636765 2.4:-1860629 MS.gene89026:CDS
TTACCACCTCACGATTGCCA+AGG 0.638073 2.4:+1860156 None:intergenic
ATTGAAGCACTCAATGCCAA+GGG 0.639765 2.4:-1860218 MS.gene89026:CDS
ATCAACCAAAGATCAATGGA+TGG 0.639768 2.4:-1859329 MS.gene89026:CDS
AAGGTTCACTGTGTATGTTG+TGG 0.644280 2.4:-1860336 MS.gene89026:CDS
TAATGCCTAGAGCCCAGTTG+CGG 0.646642 2.4:+1861563 None:intergenic
CCTCGCAATCCGGATGATGG+TGG 0.647794 2.4:-1861097 MS.gene89026:CDS
TGTTTGGGATGATAGAACGT+CGG 0.648160 2.4:-1861212 MS.gene89026:CDS
CCTCCTTGAATCCCTTACCA+AGG 0.648283 2.4:+1861312 None:intergenic
GTGGTGAGGAAATAGATAGG+TGG 0.648470 2.4:-1861672 MS.gene89026:CDS
GCTCATACCACAACGACATG+CGG 0.651651 2.4:+1859219 None:intergenic
TCCACGTCTCTTGATCATCA+GGG 0.654558 2.4:+1860660 None:intergenic
TCCCTGATGATCAAGAGACG+TGG 0.655773 2.4:-1860661 MS.gene89026:CDS
CAGCATCTTCAGGAGTCTCG+GGG 0.656506 2.4:+1860591 None:intergenic
TGTTTCAAAAGACCGCAACT+GGG 0.657307 2.4:-1861575 MS.gene89026:CDS
CCAGCCTCATAGATGTTGGG+AGG 0.659901 2.4:-1861407 MS.gene89026:CDS
CCTTGGTAAGGGATTCAAGG+AGG 0.659944 2.4:-1861312 MS.gene89026:CDS
GAAACTGAGGAATTCTTCCG+AGG 0.663978 2.4:-1861145 MS.gene89026:CDS
CTTGAGTGGATATCATGCCA+AGG 0.664717 2.4:+1860815 None:intergenic
CCTGTTGAGGAGGTATTGGG+TGG 0.671652 2.4:-1861691 MS.gene89026:CDS
TTAACTTTGAGCAGAGATGG+AGG 0.672683 2.4:-1860760 MS.gene89026:CDS
ATCATCAGGGAAAGTTACTG+GGG 0.676162 2.4:+1860673 None:intergenic
GCATCTTCAAGCTCTCTCAG+AGG 0.687558 2.4:+1860710 None:intergenic
AGACTGGCAGAGGAGGACAA+TGG 0.689150 2.4:-1860261 MS.gene89026:CDS
CCCAATATACAACTTGCAGG+AGG 0.700952 2.4:-1861439 MS.gene89026:CDS
AAGAACGACAAATAGTTCCG+AGG 0.701397 2.4:+1860182 None:intergenic
TCAAGGAGGCCAAAGCCAGG+AGG 0.704971 2.4:-1861298 MS.gene89026:CDS
TTTCTGATGATGAGTAAACA+TGG 0.707021 2.4:+1861045 None:intergenic
TGTATGTTGTGGTTCCCATG+TGG 0.707881 2.4:-1860325 MS.gene89026:CDS
TCGTTGTGGTATGAGCACCT+TGG 0.762594 2.4:-1859212 MS.gene89026:CDS
ACTTAATATACATTACAGGG+TGG 0.764594 2.4:-1861354 MS.gene89026:CDS
TCGGAAAAGTGAATGAAACG+GGG 0.795326 2.4:+1860919 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATAAAAATCAAATCTT+CGG + chr2.4:1859658-1859677 None:intergenic 10.0%
!! ATATATTCATTTAGATTATT+AGG - chr2.4:1860086-1860105 MS.gene89026:CDS 10.0%
!! TATATTCATTTAGATTATTA+GGG - chr2.4:1860087-1860106 MS.gene89026:CDS 10.0%
!!! CAAAAATAGAAATATTTTAT+TGG + chr2.4:1863057-1863076 None:intergenic 10.0%
!!! CAATAAAATATTTCTATTTT+TGG - chr2.4:1863055-1863074 MS.gene89026:intron 10.0%
!! AAAAGCCAAAAAAAAAAAAA+AGG + chr2.4:1859063-1859082 None:intergenic 15.0%
!! ACTTTATTCTAATTATTCAT+TGG - chr2.4:1862914-1862933 MS.gene89026:intron 15.0%
!! CTTTATTCTAATTATTCATT+GGG - chr2.4:1862915-1862934 MS.gene89026:intron 15.0%
!! TAAAAAAAGTAAATCACTTT+AGG - chr2.4:1859902-1859921 MS.gene89026:intron 15.0%
!!! ATTTTTTGTGAAAAAGAAAA+AGG - chr2.4:1859680-1859699 MS.gene89026:intron 15.0%
!!! TTCTTCCTTTTTTTTTTTTT+TGG - chr2.4:1859055-1859074 MS.gene89026:CDS 15.0%
!!! TTGATTTTAAAGTTATTTGT+AGG - chr2.4:1862874-1862893 MS.gene89026:intron 15.0%
!!! TTTTTTGTGAAAAAGAAAAA+GGG - chr2.4:1859681-1859700 MS.gene89026:intron 15.0%
!! AAAAGAACATTAAATGTGAT+TGG + chr2.4:1859814-1859833 None:intergenic 20.0%
!! AAAGTTATTTGTAGGATAAA+AGG - chr2.4:1862882-1862901 MS.gene89026:intron 20.0%
!! AAGGAATGTTATACAAAATA+TGG + chr2.4:1862673-1862692 None:intergenic 20.0%
!! ACAAGTTAAGAATCTAAAAA+TGG - chr2.4:1862963-1862982 MS.gene89026:intron 20.0%
!! AGATTCAAATGAACAAATTA+AGG + chr2.4:1860192-1860211 None:intergenic 20.0%
!! AGATTGTAAGAATGAAAAAA+GGG - chr2.4:1859712-1859731 MS.gene89026:intron 20.0%
!! ATCAAAAGAATAGATTGTTA+AGG + chr2.4:1860466-1860485 None:intergenic 20.0%
!! ATTGAAAATCAATATTTCCT+TGG - chr2.4:1862204-1862223 MS.gene89026:intron 20.0%
!! CAACTTATCTAAATGAATAA+GGG + chr2.4:1863119-1863138 None:intergenic 20.0%
!! TAAACTCATAAATGTTTGAA+TGG - chr2.4:1859575-1859594 MS.gene89026:intron 20.0%
!! TAGATTGTAAGAATGAAAAA+AGG - chr2.4:1859711-1859730 MS.gene89026:intron 20.0%
!!! ATGTTTGATTTTAATTGTGA+AGG - chr2.4:1860142-1860161 MS.gene89026:CDS 20.0%
!!! ATTCAATCTGAAATTTTGTT+AGG - chr2.4:1859380-1859399 MS.gene89026:intron 20.0%
!!! CTCAATCATAAAAAAAGTAT+TGG + chr2.4:1862710-1862729 None:intergenic 20.0%
!!! GAAACAAAAATATTTTCATC+AGG + chr2.4:1860601-1860620 None:intergenic 20.0%
!!! TGTTTGATTTTAATTGTGAA+GGG - chr2.4:1860143-1860162 MS.gene89026:CDS 20.0%
! ATCTTTGAATTTCCATGAAT+TGG + chr2.4:1861055-1861074 None:intergenic 25.0%
! ATTGTCCAGAATATAGAAAT+TGG - chr2.4:1861604-1861623 MS.gene89026:CDS 25.0%
! CCAACTTATCTAAATGAATA+AGG + chr2.4:1863120-1863139 None:intergenic 25.0%
! CCTTATTCATTTAGATAAGT+TGG - chr2.4:1863117-1863136 MS.gene89026:intron 25.0%
! GATAAACTCAAGAATATTAG+TGG - chr2.4:1859004-1859023 MS.gene89026:CDS 25.0%
! TACTGTTGTAAATTTCTAAC+TGG - chr2.4:1860025-1860044 MS.gene89026:intron 25.0%
! TGAAAGATGATAATCCTATT+GGG - chr2.4:1860933-1860952 MS.gene89026:CDS 25.0%
! TGAGATTAATAAAAGAAAGC+TGG - chr2.4:1863195-1863214 MS.gene89026:intron 25.0%
! TTAGATAAGACAAAACTTTG+AGG - chr2.4:1860742-1860761 MS.gene89026:CDS 25.0%
! TTATAATATCGCCAATTGTA+TGG - chr2.4:1859967-1859986 MS.gene89026:intron 25.0%
! TTATTTAATCCCACTTCATT+TGG + chr2.4:1861679-1861698 None:intergenic 25.0%
! TTCCTCTGTTAAAAAAAGAT+GGG - chr2.4:1861485-1861504 MS.gene89026:CDS 25.0%
! TTTGTACCTTTATTACATGA+TGG - chr2.4:1860624-1860643 MS.gene89026:CDS 25.0%
!! ATCTTAACCTTGTTCATTTT+AGG - chr2.4:1860484-1860503 MS.gene89026:CDS 25.0%
!! GAAGGATAATTTTTCACTTT+TGG - chr2.4:1860646-1860665 MS.gene89026:CDS 25.0%
!! TACTCATCATCAGAAAATTT+TGG - chr2.4:1861636-1861655 MS.gene89026:CDS 25.0%
!! TCTTAACCTTGTTCATTTTA+GGG - chr2.4:1860485-1860504 MS.gene89026:CDS 25.0%
!!! CAAAAGGTCATTTTAATTTC+AGG + chr2.4:1860231-1860250 None:intergenic 25.0%
!!! CATATGTGTTCATGTTTTTT+GGG + chr2.4:1860333-1860352 None:intergenic 25.0%
!!! GAATTTTTTTTGTCCAAATG+TGG + chr2.4:1863144-1863163 None:intergenic 25.0%
!!! GATGGGATATTTTTAAGAAT+GGG - chr2.4:1860427-1860446 MS.gene89026:CDS 25.0%
!!! TCATATGTGTTCATGTTTTT+TGG + chr2.4:1860334-1860353 None:intergenic 25.0%
!!! TCTGTTATTTGTTTGTTGTA+CGG - chr2.4:1859141-1859160 MS.gene89026:CDS 25.0%
!!! TGATGGGATATTTTTAAGAA+TGG - chr2.4:1860426-1860445 MS.gene89026:CDS 25.0%
AAACTCAAGAATATTAGTGG+TGG - chr2.4:1859007-1859026 MS.gene89026:CDS 30.0%
AACCCTATCATTTAGCTAAT+AGG - chr2.4:1863403-1863422 MS.gene89026:intron 30.0%
ACCAAGAAAATATCCTTTGA+TGG - chr2.4:1863245-1863264 MS.gene89026:intron 30.0%
ACTTAATATACATTACAGGG+TGG - chr2.4:1861320-1861339 MS.gene89026:CDS 30.0%
AGGCACTTAATATACATTAC+AGG - chr2.4:1861316-1861335 MS.gene89026:CDS 30.0%
AGGTTTGAGTAAAATTCATC+TGG + chr2.4:1862793-1862812 None:intergenic 30.0%
ATATAATCTGAATCAGGTTC+TGG + chr2.4:1862573-1862592 None:intergenic 30.0%
ATCAATGGTTGCATAAAGTT+TGG + chr2.4:1860795-1860814 None:intergenic 30.0%
ATCCTTCCATCATGTAATAA+AGG + chr2.4:1860633-1860652 None:intergenic 30.0%
ATGAACACATATGAACTCAA+AGG - chr2.4:1860340-1860359 MS.gene89026:CDS 30.0%
ATTAGAAGTCCTAAATTTCC+TGG - chr2.4:1861130-1861149 MS.gene89026:CDS 30.0%
ATTTGCCCAAAAACTTCTAA+AGG + chr2.4:1859928-1859947 None:intergenic 30.0%
CAGCTATTTAGATCTATTGA+CGG - chr2.4:1862042-1862061 MS.gene89026:intron 30.0%
GAAAGATGATAATCCTATTG+GGG - chr2.4:1860934-1860953 MS.gene89026:CDS 30.0%
GATGATGAATACATAATCGT+CGG - chr2.4:1863312-1863331 MS.gene89026:intron 30.0%
GGAAGGATAACATAATAGAT+AGG - chr2.4:1862127-1862146 MS.gene89026:intron 30.0%
GGCACTTAATATACATTACA+GGG - chr2.4:1861317-1861336 MS.gene89026:CDS 30.0%
GGCGATATTATAAAAATCCA+AGG + chr2.4:1859960-1859979 None:intergenic 30.0%
GGTTTGAGTAAAATTCATCT+GGG + chr2.4:1862792-1862811 None:intergenic 30.0%
GTGAAAGATGATAATCCTAT+TGG - chr2.4:1860932-1860951 MS.gene89026:CDS 30.0%
GTGAATAAAGAACCAATTCA+TGG - chr2.4:1861040-1861059 MS.gene89026:CDS 30.0%
GTTCCTCTGTTAAAAAAAGA+TGG - chr2.4:1861484-1861503 MS.gene89026:CDS 30.0%
TAATGCATTCTTCACTTTCT+GGG + chr2.4:1863512-1863531 None:intergenic 30.0%
TCTTAAAAATATCCCATCAG+AGG + chr2.4:1860425-1860444 None:intergenic 30.0%
TGCCTATTAGCTAAATGATA+GGG + chr2.4:1863408-1863427 None:intergenic 30.0%
TGTTTATACTGAGATTTCCT+TGG - chr2.4:1861345-1861364 MS.gene89026:CDS 30.0%
TTACTTACCTATCATCATCT+TGG + chr2.4:1862637-1862656 None:intergenic 30.0%
! AAAGGATATTTTCTTGGTGA+AGG + chr2.4:1863243-1863262 None:intergenic 30.0%
! AAATGTTTGAATGGTAGTGA+AGG - chr2.4:1859584-1859603 MS.gene89026:intron 30.0%
! ACCATCAAAGGATATTTTCT+TGG + chr2.4:1863249-1863268 None:intergenic 30.0%
! AGAAAATATCCTTTGATGGT+AGG - chr2.4:1863249-1863268 MS.gene89026:intron 30.0%
! ATCTTAAGTGAAAGCTCTTT+TGG + chr2.4:1862294-1862313 None:intergenic 30.0%
! ATTTTCTTGGTGAAGGAAAA+GGG + chr2.4:1863236-1863255 None:intergenic 30.0%
! GAGATTTGTTCTTTCAAACA+TGG - chr2.4:1859479-1859498 MS.gene89026:intron 30.0%
! TACCTTTATTACATGATGGA+AGG - chr2.4:1860628-1860647 MS.gene89026:CDS 30.0%
! TAGGGTATTAATGCTTGTTT+GGG - chr2.4:1861447-1861466 MS.gene89026:CDS 30.0%
! TATTTTCTTGGTGAAGGAAA+AGG + chr2.4:1863237-1863256 None:intergenic 30.0%
! TCATCATCAGAAAATTTTGG+TGG - chr2.4:1861639-1861658 MS.gene89026:CDS 30.0%
! TCTTAAGTGAAAGCTCTTTT+GGG + chr2.4:1862293-1862312 None:intergenic 30.0%
! TTAGGGTATTAATGCTTGTT+TGG - chr2.4:1861446-1861465 MS.gene89026:CDS 30.0%
! TTTCTGATGATGAGTAAACA+TGG + chr2.4:1861632-1861651 None:intergenic 30.0%
!! ATTGGAAAGAAAGTGTTAGA+AGG + chr2.4:1862692-1862711 None:intergenic 30.0%
!! GTTAAAAAAAGATGGGTTGA+TGG - chr2.4:1861492-1861511 MS.gene89026:CDS 30.0%
!! TTAGGCCTTTAGAAGTTTTT+GGG - chr2.4:1859920-1859939 MS.gene89026:intron 30.0%
!! TTTAGGCCTTTAGAAGTTTT+TGG - chr2.4:1859919-1859938 MS.gene89026:intron 30.0%
!!! AACCCATCTTTTTTTAACAG+AGG + chr2.4:1861490-1861509 None:intergenic 30.0%
AAACAAAACATCCCAAGCAA+TGG + chr2.4:1861896-1861915 None:intergenic 35.0%
AACAAAACATCCCAAGCAAT+GGG + chr2.4:1861895-1861914 None:intergenic 35.0%
AACAAACCTGGATCTTTGTT+AGG - chr2.4:1860364-1860383 MS.gene89026:CDS 35.0%
AACATAAATCATGAAACGCC+TGG + chr2.4:1862610-1862629 None:intergenic 35.0%
AAGGACCAGAATCATAGAAA+AGG - chr2.4:1860835-1860854 MS.gene89026:CDS 35.0%
AAGTGAAGAATGCATTAGGA+AGG - chr2.4:1863515-1863534 MS.gene89026:intron 35.0%
AATAGAAAAAGGTGGTCCTA+GGG - chr2.4:1861834-1861853 MS.gene89026:CDS 35.0%
ACATAGCATATGCAGGATAA+AGG + chr2.4:1860305-1860324 None:intergenic 35.0%
ACCAGATTGCTGACAAATAT+TGG - chr2.4:1863541-1863560 MS.gene89026:intron 35.0%
AGACCAGCTTAATGAACAAA+AGG + chr2.4:1860247-1860266 None:intergenic 35.0%
AGTCTACCCTAAAATGAACA+AGG + chr2.4:1860494-1860513 None:intergenic 35.0%
ATACTGAGATTTCCTTGGTA+AGG - chr2.4:1861350-1861369 MS.gene89026:CDS 35.0%
ATATGATATCCGATGCCAAA+TGG + chr2.4:1860907-1860926 None:intergenic 35.0%
ATATTGGGGACAAAATTGTC+TGG + chr2.4:1861223-1861242 None:intergenic 35.0%
ATCAACCAAAGATCAATGGA+TGG - chr2.4:1863345-1863364 MS.gene89026:intron 35.0%
ATGAACTTCTGTCTTATCCA+TGG + chr2.4:1859769-1859788 None:intergenic 35.0%
ATGATTGAGCAATGTTCACA+TGG - chr2.4:1862721-1862740 MS.gene89026:intron 35.0%
ATGCACTTATGCTAAAACGA+AGG + chr2.4:1860531-1860550 None:intergenic 35.0%
ATTGTTAGCAAGATTGAAGC+TGG - chr2.4:1862312-1862331 MS.gene89026:intron 35.0%
CAAAAAATTGCAGCTTCACA+TGG + chr2.4:1861078-1861097 None:intergenic 35.0%
CAACATCAACCAAAGATCAA+TGG - chr2.4:1863341-1863360 MS.gene89026:intron 35.0%
CAGAAAGTGAAGAATGCATT+AGG - chr2.4:1863511-1863530 MS.gene89026:intron 35.0%
CAGTTCAAGTCTTTCTGATA+AGG + chr2.4:1859554-1859573 None:intergenic 35.0%
CCAGATTGCTGACAAATATT+GGG - chr2.4:1863542-1863561 MS.gene89026:intron 35.0%
CTAACGCATGTAAACATAAG+TGG + chr2.4:1860576-1860595 None:intergenic 35.0%
CTAATGCATTCTTCACTTTC+TGG + chr2.4:1863513-1863532 None:intergenic 35.0%
CTAGTTAGTTGGAAGGATAA+AGG - chr2.4:1859608-1859627 MS.gene89026:intron 35.0%
CTATTTAGATCTATTGACGG+TGG - chr2.4:1862045-1862064 MS.gene89026:intron 35.0%
CTGCCTATTAGCTAAATGAT+AGG + chr2.4:1863409-1863428 None:intergenic 35.0%
GAAAAGGAGACCTACTAAAT+AGG + chr2.4:1862756-1862775 None:intergenic 35.0%
GATAAGACAGAAGTTCATCA+AGG - chr2.4:1859771-1859790 MS.gene89026:intron 35.0%
GGATAAAACATAGCATATGC+AGG + chr2.4:1860312-1860331 None:intergenic 35.0%
GTTCGGAAAAGTGAATGAAA+CGG + chr2.4:1861760-1861779 None:intergenic 35.0%
TAAGGAACTCCAGGAAATTT+AGG + chr2.4:1861142-1861161 None:intergenic 35.0%
TACTCATGATCAAGAAACTG+AGG - chr2.4:1861516-1861535 MS.gene89026:CDS 35.0%
TACTGAGATTTCCTTGGTAA+GGG - chr2.4:1861351-1861370 MS.gene89026:CDS 35.0%
TATGATATCCGATGCCAAAT+GGG + chr2.4:1860906-1860925 None:intergenic 35.0%
TATTGGGGACAAAATTGTCT+GGG + chr2.4:1861222-1861241 None:intergenic 35.0%
TCGTGCTTTCTCTAAATCAA+TGG + chr2.4:1860810-1860829 None:intergenic 35.0%
TCTTCATGCTACAATCTTTG+AGG - chr2.4:1858979-1858998 MS.gene89026:CDS 35.0%
TGAAAAGACTCATTCCATTG+AGG + chr2.4:1860872-1860891 None:intergenic 35.0%
TGAATCTATTTGTCACCTGT+CGG - chr2.4:1860205-1860224 MS.gene89026:CDS 35.0%
TGATTGAGCAATGTTCACAT+GGG - chr2.4:1862722-1862741 MS.gene89026:intron 35.0%
TGCACTTATGCTAAAACGAA+GGG + chr2.4:1860530-1860549 None:intergenic 35.0%
TTCGGAAAAGTGAATGAAAC+GGG + chr2.4:1861759-1861778 None:intergenic 35.0%
TTGATGCAATCACAAAAGCA+AGG - chr2.4:1861296-1861315 MS.gene89026:CDS 35.0%
TTGTTAGCAAGATTGAAGCT+GGG - chr2.4:1862313-1862332 MS.gene89026:intron 35.0%
! AAAGGGAAAGTGTAAAGAGA+TGG - chr2.4:1859729-1859748 MS.gene89026:intron 35.0%
! ACGCATTCAATCAGAAGTAT+CGG - chr2.4:1859265-1859284 MS.gene89026:CDS 35.0%
! ATGCTCCTTTTCTATGATTC+TGG + chr2.4:1860843-1860862 None:intergenic 35.0%
! CATTGATCTTTGGTTGATGT+TGG + chr2.4:1863343-1863362 None:intergenic 35.0%
! CTCAAGAAAAAAGCACAAGA+AGG - chr2.4:1861421-1861440 MS.gene89026:CDS 35.0%
! CTTTGTGTGTAGAAAGCATA+AGG + chr2.4:1861160-1861179 None:intergenic 35.0%
! TGACCTTTTGTTCATTAAGC+TGG - chr2.4:1860241-1860260 MS.gene89026:CDS 35.0%
! TGGTGCCAATTTCTATATTC+TGG + chr2.4:1861612-1861631 None:intergenic 35.0%
! TGTTTAACTTTGAGCAGAGA+TGG - chr2.4:1861911-1861930 MS.gene89026:CDS 35.0%
!! AAAAAGCACAAGAAGGTGTT+AGG - chr2.4:1861428-1861447 MS.gene89026:CDS 35.0%
!! AAAAGCACAAGAAGGTGTTA+GGG - chr2.4:1861429-1861448 MS.gene89026:CDS 35.0%
!! AGAATTGTGAGTTTTGTAGG+AGG - chr2.4:1861703-1861722 MS.gene89026:CDS 35.0%
!! AGAGACTCTGAAATTGCAAT+GGG - chr2.4:1863372-1863391 MS.gene89026:intron 35.0%
!! AGATAGGTGGGTTGAAATAT+TGG - chr2.4:1861015-1861034 MS.gene89026:CDS 35.0%
!! CGAAGAATTGTGAGTTTTGT+AGG - chr2.4:1861700-1861719 MS.gene89026:CDS 35.0%
!! GGGTCTCAATCATTTTGAAA+AGG + chr2.4:1862772-1862791 None:intergenic 35.0%
!! TAGAGACTCTGAAATTGCAA+TGG - chr2.4:1863371-1863390 MS.gene89026:intron 35.0%
!! TAGATAAGTTGGTCCACATT+TGG - chr2.4:1863128-1863147 MS.gene89026:intron 35.0%
!! TCATCAGAAAATTTTGGTGG+TGG - chr2.4:1861642-1861661 MS.gene89026:CDS 35.0%
!!! ATTGTTTTTGCTCTCTGTGT+TGG - chr2.4:1859849-1859868 MS.gene89026:intron 35.0%
!!! TTTTAGGGTAGACTTTTGCT+TGG - chr2.4:1860500-1860519 MS.gene89026:CDS 35.0%
AAGAACGACAAATAGTTCCG+AGG + chr2.4:1862495-1862514 None:intergenic 40.0%
AAGGTTCACTGTGTATGTTG+TGG - chr2.4:1862338-1862357 MS.gene89026:intron 40.0%
AATCGTGAGGTGGTAAAACA+AGG - chr2.4:1862525-1862544 MS.gene89026:intron 40.0%
AATGTACGCCCTTCCAATTA+AGG + chr2.4:1860963-1860982 None:intergenic 40.0%
AATGTTATCTTGTGCCCTCA+AGG + chr2.4:1863095-1863114 None:intergenic 40.0%
ACCTCCTGCAAGTTGTATAT+TGG + chr2.4:1861239-1861258 None:intergenic 40.0%
AGATTATATGCGAGCTCAAG+AGG - chr2.4:1862584-1862603 MS.gene89026:intron 40.0%
AGTGAGTTGCCAAATGAAGT+GGG - chr2.4:1861667-1861686 MS.gene89026:CDS 40.0%
ATATCGCCAATTGTATGGCT+AGG - chr2.4:1859972-1859991 MS.gene89026:intron 40.0%
ATCATCAGGGAAAGTTACTG+GGG + chr2.4:1862004-1862023 None:intergenic 40.0%
ATGTTTCAAAAGACCGCAAC+TGG - chr2.4:1861098-1861117 MS.gene89026:CDS 40.0%
ATTCTTCACTTTCTGGGTGA+AGG + chr2.4:1863506-1863525 None:intergenic 40.0%
CAATAGAAAAAGGTGGTCCT+AGG - chr2.4:1861833-1861852 MS.gene89026:CDS 40.0%
CACAAACCTAACAAAGATCC+AGG + chr2.4:1860373-1860392 None:intergenic 40.0%
CACACAAAGACAAGGTTGTA+AGG - chr2.4:1861171-1861190 MS.gene89026:CDS 40.0%
CAGTTCAGGCAATATTAGAC+TGG - chr2.4:1862397-1862416 MS.gene89026:intron 40.0%
CCCAATATTTGTCAGCAATC+TGG + chr2.4:1863545-1863564 None:intergenic 40.0%
CCTCCTGCAAGTTGTATATT+GGG + chr2.4:1861238-1861257 None:intergenic 40.0%
CCTGGTGCTTCAATAGAAAA+AGG - chr2.4:1861823-1861842 MS.gene89026:CDS 40.0%
CTAAAGCTGGGCTTATTAGT+GGG - chr2.4:1862106-1862125 MS.gene89026:intron 40.0%
CTATGAACTCCTACCATCAA+AGG + chr2.4:1863261-1863280 None:intergenic 40.0%
CTCCTGCAAGTTGTATATTG+GGG + chr2.4:1861237-1861256 None:intergenic 40.0%
GAACTCAAAGGAAACAAACC+TGG - chr2.4:1860352-1860371 MS.gene89026:CDS 40.0%
GATCATCAGGGAAAGTTACT+GGG + chr2.4:1862005-1862024 None:intergenic 40.0%
GCTCGCATATAATCTGAATC+AGG + chr2.4:1862579-1862598 None:intergenic 40.0%
GCTTTCTACACACAAAGACA+AGG - chr2.4:1861163-1861182 MS.gene89026:CDS 40.0%
GGAGACCTACTAAATAGGAA+AGG + chr2.4:1862751-1862770 None:intergenic 40.0%
GGTATTAAGCCTGAAGACAT+TGG - chr2.4:1862252-1862271 MS.gene89026:intron 40.0%
GGTCTCCTTTCCTATTTAGT+AGG - chr2.4:1862743-1862762 MS.gene89026:intron 40.0%
GGTGCTTCAATAGAAAAAGG+TGG - chr2.4:1861826-1861845 MS.gene89026:CDS 40.0%
GTTCATGCCAAGATGATGAT+AGG - chr2.4:1862627-1862646 MS.gene89026:intron 40.0%
TACTATATGATGAGCGAGTG+AGG + chr2.4:1862813-1862832 None:intergenic 40.0%
TAGAAGCCTAGCCATACAAT+TGG + chr2.4:1859981-1860000 None:intergenic 40.0%
TAGAGATGAAGCCAAAACAG+TGG + chr2.4:1859433-1859452 None:intergenic 40.0%
TAGCACCATCCATTGATCTT+TGG + chr2.4:1863353-1863372 None:intergenic 40.0%
TATTTGTCGTTCTTCTGCCT+TGG - chr2.4:1862501-1862520 MS.gene89026:intron 40.0%
TCACATTTACTGTGCCCATT+TGG - chr2.4:1860889-1860908 MS.gene89026:CDS 40.0%
TCAGGGAAGAATTCAAATCC+TGG + chr2.4:1863663-1863682 None:intergenic 40.0%
TCGGAAAAGTGAATGAAACG+GGG + chr2.4:1861758-1861777 None:intergenic 40.0%
TGATCATCAGGGAAAGTTAC+TGG + chr2.4:1862006-1862025 None:intergenic 40.0%
TGGTGAGGAAATAGATAGGT+GGG - chr2.4:1861003-1861022 MS.gene89026:CDS 40.0%
TGGTGGTAACATTCTTTCCA+AGG - chr2.4:1859024-1859043 MS.gene89026:CDS 40.0%
TGTTAGCAAGATTGAAGCTG+GGG - chr2.4:1862314-1862333 MS.gene89026:intron 40.0%
TGTTTCAAAAGACCGCAACT+GGG - chr2.4:1861099-1861118 MS.gene89026:CDS 40.0%
TTAACTTTGAGCAGAGATGG+AGG - chr2.4:1861914-1861933 MS.gene89026:CDS 40.0%
TTACCAGCCTCATAGATGTT+GGG - chr2.4:1861264-1861283 MS.gene89026:CDS 40.0%
TTTCATCAGCCTAACTTTCC+TGG - chr2.4:1861805-1861824 MS.gene89026:CDS 40.0%
TTTCCTTGGTAAGGGATTCA+AGG - chr2.4:1861359-1861378 MS.gene89026:CDS 40.0%
TTTGAGGAGACAGTTGGATT+CGG - chr2.4:1860758-1860777 MS.gene89026:CDS 40.0%
! AAGTGTAAAGAGATGGTGGT+TGG - chr2.4:1859736-1859755 MS.gene89026:intron 40.0%
! AGGAGCATGTTAATCCTCAA+TGG - chr2.4:1860855-1860874 MS.gene89026:CDS 40.0%
! AGTGTAAAGAGATGGTGGTT+GGG - chr2.4:1859737-1859756 MS.gene89026:intron 40.0%
! ATTGAAGCACCAGGAAAGTT+AGG + chr2.4:1861817-1861836 None:intergenic 40.0%
! ATTGAAGCACTCAATGCCAA+GGG - chr2.4:1862456-1862475 MS.gene89026:intron 40.0%
! CAAAACTTTGAGGAGACAGT+TGG - chr2.4:1860752-1860771 MS.gene89026:CDS 40.0%
! GATTTAGAGAAAGCACGAGT+GGG - chr2.4:1860812-1860831 MS.gene89026:CDS 40.0%
! GTAGAGTTTTGCCACTGTTT+TGG - chr2.4:1859419-1859438 MS.gene89026:intron 40.0%
! TAGAAAGCATAAGGAACTCC+AGG + chr2.4:1861151-1861170 None:intergenic 40.0%
! TATTGAAGCACTCAATGCCA+AGG - chr2.4:1862455-1862474 MS.gene89026:intron 40.0%
! TGATTTAGAGAAAGCACGAG+TGG - chr2.4:1860811-1860830 MS.gene89026:CDS 40.0%
! TGTCTGGGATATGAGAATCT+TGG + chr2.4:1861207-1861226 None:intergenic 40.0%
! TGTTTGGGATGATAGAACGT+CGG - chr2.4:1861462-1861481 MS.gene89026:CDS 40.0%
!! AAGGAAGAAAAGAAGCACCT+TGG + chr2.4:1859044-1859063 None:intergenic 40.0%
!! ATTCCTGTTGAGGAGGTATT+GGG - chr2.4:1860980-1860999 MS.gene89026:CDS 40.0%
!! ATTCTTAACTTGTGCCCTGA+GGG + chr2.4:1862956-1862975 None:intergenic 40.0%
!! CCTTTTTCTATTGAAGCACC+AGG + chr2.4:1861826-1861845 None:intergenic 40.0%
!! CTTCTTAACTTGTGCCTTGA+GGG - chr2.4:1863078-1863097 MS.gene89026:intron 40.0%
!! GTAGTGAAGGACTAGTTAGT+TGG - chr2.4:1859597-1859616 MS.gene89026:intron 40.0%
!! TCATTCACTTTTCCGAACTC+TGG - chr2.4:1861762-1861781 MS.gene89026:CDS 40.0%
!! TGAAGGACTAGTTAGTTGGA+AGG - chr2.4:1859601-1859620 MS.gene89026:intron 40.0%
!!! CATTTTAATTTCAGGCCGAC+AGG + chr2.4:1860223-1860242 None:intergenic 40.0%
AAGTAGTAAGTATGGGTGGG+AGG + chr2.4:1863722-1863741 None:intergenic 45.0%
ACAATCAACAACGACGCACA+TGG + chr2.4:1860683-1860702 None:intergenic 45.0%
ACAATGCTTCCACCATCATC+CGG + chr2.4:1861589-1861608 None:intergenic 45.0%
ACATCCTCCCAACATCTATG+AGG + chr2.4:1861274-1861293 None:intergenic 45.0%
ACGACGCACATGGGAAATAA+AGG + chr2.4:1860673-1860692 None:intergenic 45.0%
ACTCAATGCCAAGGGAATTG+AGG - chr2.4:1862464-1862483 MS.gene89026:intron 45.0%
AGGATCTTCCTCAATTCCCT+TGG + chr2.4:1862475-1862494 None:intergenic 45.0%
AGGCAATATTAGACTGGCAG+AGG - chr2.4:1862403-1862422 MS.gene89026:intron 45.0%
AGGGAATTGAGGAAGATCCT+CGG - chr2.4:1862475-1862494 MS.gene89026:intron 45.0%
AGGTTTCTTGAAGCATGCCA+AGG + chr2.4:1863482-1863501 None:intergenic 45.0%
ATATCATGCCAAGGTTCCCT+AGG + chr2.4:1861853-1861872 None:intergenic 45.0%
ATCCTTATCGAAGCCTCTGA+TGG - chr2.4:1860409-1860428 MS.gene89026:CDS 45.0%
ATGGCGCAAATTCTGCTACA+TGG - chr2.4:1858953-1858972 MS.gene89026:CDS 45.0%
CAATATTAGACTGGCAGAGG+AGG - chr2.4:1862406-1862425 MS.gene89026:intron 45.0%
CAATCAACAACGACGCACAT+GGG + chr2.4:1860682-1860701 None:intergenic 45.0%
CAGTGAGTTGCCAAATGAAG+TGG - chr2.4:1861666-1861685 MS.gene89026:CDS 45.0%
CCAATTAAGGTTGCCCCAAT+AGG + chr2.4:1860950-1860969 None:intergenic 45.0%
CCCAATATACAACTTGCAGG+AGG - chr2.4:1861235-1861254 MS.gene89026:CDS 45.0%
CCTATTGGGGCAACCTTAAT+TGG - chr2.4:1860947-1860966 MS.gene89026:CDS 45.0%
CCTGAACTGATGCACTTTCT+GGG + chr2.4:1862386-1862405 None:intergenic 45.0%
CTGAAGATGCTGCTAAAGCT+GGG - chr2.4:1862094-1862113 MS.gene89026:intron 45.0%
CTTACCAGCCTCATAGATGT+TGG - chr2.4:1861263-1861282 MS.gene89026:CDS 45.0%
CTTGAGTGGATATCATGCCA+AGG + chr2.4:1861862-1861881 None:intergenic 45.0%
CTTGGCATGATATCCACTCA+AGG - chr2.4:1861860-1861879 MS.gene89026:CDS 45.0%
GAAACTGAGGAATTCTTCCG+AGG - chr2.4:1861529-1861548 MS.gene89026:CDS 45.0%
GAGACAGTTGGATTCGGAAA+AGG - chr2.4:1860764-1860783 MS.gene89026:CDS 45.0%
GATATCCACTCAAGGCTTGA+AGG - chr2.4:1861868-1861887 MS.gene89026:CDS 45.0%
GATGGTAGGAGTTCATAGTG+TGG - chr2.4:1863263-1863282 MS.gene89026:intron 45.0%
GCTAAAGCTGGGCTTATTAG+TGG - chr2.4:1862105-1862124 MS.gene89026:intron 45.0%
GGGCAAATGATTCATCACCT+TGG - chr2.4:1859940-1859959 MS.gene89026:intron 45.0%
GTCCCCAATATACAACTTGC+AGG - chr2.4:1861232-1861251 MS.gene89026:CDS 45.0%
GTGGTGAGGAAATAGATAGG+TGG - chr2.4:1861002-1861021 MS.gene89026:CDS 45.0%
TACTGGGGATGGGGTAATAA+TGG + chr2.4:1861989-1862008 None:intergenic 45.0%
TCCACGTCTCTTGATCATCA+GGG + chr2.4:1862017-1862036 None:intergenic 45.0%
TCCTTATCGAAGCCTCTGAT+GGG - chr2.4:1860410-1860429 MS.gene89026:CDS 45.0%
TGAATTCTTCCCTGACACCA+AGG - chr2.4:1863668-1863687 MS.gene89026:CDS 45.0%
TGGGGCAACCTTAATTGGAA+GGG - chr2.4:1860952-1860971 MS.gene89026:CDS 45.0%
TGGGTGGTGAGGAAATAGAT+AGG - chr2.4:1860999-1861018 MS.gene89026:CDS 45.0%
TGTATGTTGTGGTTCCCATG+TGG - chr2.4:1862349-1862368 MS.gene89026:intron 45.0%
TTACTGTGCCCATTTGGCAT+CGG - chr2.4:1860895-1860914 MS.gene89026:CDS 45.0%
TTCACTTTCTGGGTGAAGGA+AGG + chr2.4:1863502-1863521 None:intergenic 45.0%
TTCCACGTCTCTTGATCATC+AGG + chr2.4:1862018-1862037 None:intergenic 45.0%
TTGGGGCAACCTTAATTGGA+AGG - chr2.4:1860951-1860970 MS.gene89026:CDS 45.0%
! AAAGAGATGGTGGTTGGGAT+TGG - chr2.4:1859742-1859761 MS.gene89026:intron 45.0%
! CATTCCTGTTGAGGAGGTAT+TGG - chr2.4:1860979-1860998 MS.gene89026:CDS 45.0%
! GAATCAGGTTCTGGTCTTTC+AGG + chr2.4:1862564-1862583 None:intergenic 45.0%
! GGGAAAGTGTAAAGAGATGG+TGG - chr2.4:1859732-1859751 MS.gene89026:intron 45.0%
! TGCAAAGCACCAATGTCTTC+AGG + chr2.4:1862264-1862283 None:intergenic 45.0%
!! GATTCTTAACTTGTGCCCTG+AGG + chr2.4:1862957-1862976 None:intergenic 45.0%
!! GCTTCTTAACTTGTGCCTTG+AGG - chr2.4:1863077-1863096 MS.gene89026:intron 45.0%
ACCTTCTCCGCTATCCCATT+GGG - chr2.4:1863607-1863626 MS.gene89026:intron 50.0%
ACTCTTGAGCATGATCTCCC+TGG - chr2.4:1863582-1863601 MS.gene89026:intron 50.0%
AGCAGCATCTTCAGGAGTCT+CGG + chr2.4:1862088-1862107 None:intergenic 50.0%
AGCTAATAGGCAGCCTGCAA+GGG - chr2.4:1863416-1863435 MS.gene89026:intron 50.0%
AGCTGGGCTTATTAGTGGGA+AGG - chr2.4:1862110-1862129 MS.gene89026:intron 50.0%
AGGGAAAGTTACTGGGGATG+GGG + chr2.4:1861998-1862017 None:intergenic 50.0%
ATGGAGGAAGCAAGGTGGAA+AGG - chr2.4:1861930-1861949 MS.gene89026:CDS 50.0%
ATGGTTTCCGCATGTCGTTG+TGG - chr2.4:1863448-1863467 MS.gene89026:intron 50.0%
ATTGACGGTGGAGCAGCTTT+CGG - chr2.4:1862057-1862076 MS.gene89026:intron 50.0%
CAGGGAAAGTTACTGGGGAT+GGG + chr2.4:1861999-1862018 None:intergenic 50.0%
CCTCCTTGAATCCCTTACCA+AGG + chr2.4:1861365-1861384 None:intergenic 50.0%
CCTGAAGATGCTGCTAAAGC+TGG - chr2.4:1862093-1862112 MS.gene89026:intron 50.0%
CCTTCACTGGAAACCCCAAT+GGG + chr2.4:1863624-1863643 None:intergenic 50.0%
CCTTGGTAAGGGATTCAAGG+AGG - chr2.4:1861362-1861381 MS.gene89026:CDS 50.0%
GATGTGCTGTGTCCAGAGTT+CGG + chr2.4:1861777-1861796 None:intergenic 50.0%
GCAAGATTGAAGCTGGGGAA+AGG - chr2.4:1862319-1862338 MS.gene89026:intron 50.0%
GCATCTTCAAGCTCTCTCAG+AGG + chr2.4:1861967-1861986 None:intergenic 50.0%
GCCTGAACTGATGCACTTTC+TGG + chr2.4:1862387-1862406 None:intergenic 50.0%
GCTCATACCACAACGACATG+CGG + chr2.4:1863458-1863477 None:intergenic 50.0%
GCTTGAAGGTCCCATTGCTT+GGG - chr2.4:1861882-1861901 MS.gene89026:CDS 50.0%
TAATGCCTAGAGCCCAGTTG+CGG + chr2.4:1861114-1861133 None:intergenic 50.0%
TAGCTAATAGGCAGCCTGCA+AGG - chr2.4:1863415-1863434 MS.gene89026:intron 50.0%
TCAGGGAAAGTTACTGGGGA+TGG + chr2.4:1862000-1862019 None:intergenic 50.0%
TCCACGCATAGCAACTTCCA+AGG + chr2.4:1862224-1862243 None:intergenic 50.0%
TCCCATCAGAGGCTTCGATA+AGG + chr2.4:1860414-1860433 None:intergenic 50.0%
TCCCTGATGATCAAGAGACG+TGG - chr2.4:1862013-1862032 MS.gene89026:intron 50.0%
TCCTTCACTGGAAACCCCAA+TGG + chr2.4:1863625-1863644 None:intergenic 50.0%
TCCTTGGAAGTTGCTATGCG+TGG - chr2.4:1862220-1862239 MS.gene89026:intron 50.0%
TCGTTGTGGTATGAGCACCT+TGG - chr2.4:1863462-1863481 MS.gene89026:intron 50.0%
TGGAAACCCCAATGGGATAG+CGG + chr2.4:1863617-1863636 None:intergenic 50.0%
TGTCTTATGCCCTCGCAATC+CGG - chr2.4:1861567-1861586 MS.gene89026:CDS 50.0%
TTACCACCTCACGATTGCCA+AGG + chr2.4:1862521-1862540 None:intergenic 50.0%
! AAGGGCGTACATTCCTGTTG+AGG - chr2.4:1860970-1860989 MS.gene89026:CDS 50.0%
! CCAGCTTTAGCAGCATCTTC+AGG + chr2.4:1862096-1862115 None:intergenic 50.0%
! CCCAGAAAGTGCATCAGTTC+AGG - chr2.4:1862383-1862402 MS.gene89026:intron 50.0%
! TAGAGAAAGCACGAGTGGGA+AGG - chr2.4:1860816-1860835 MS.gene89026:CDS 50.0%
! TCAGGTTCTGGTCTTTCAGG+AGG + chr2.4:1862561-1862580 None:intergenic 50.0%
!! GGAGGCATTGATCTCTGTGA+TGG - chr2.4:1861721-1861740 MS.gene89026:CDS 50.0%
!! TGAAGCACTGACACAGACAC+CGG - chr2.4:1859173-1859192 MS.gene89026:CDS 50.0%
AAAGACCGCAACTGGGCTCT+AGG - chr2.4:1861106-1861125 MS.gene89026:CDS 55.0%
AAGGTGGTCCTAGGGAACCT+TGG - chr2.4:1861842-1861861 MS.gene89026:CDS 55.0%
ACCAAGGCTCGTGTTCTTGG+CGG - chr2.4:1863684-1863703 MS.gene89026:CDS 55.0%
AGACTGGCAGAGGAGGACAA+TGG - chr2.4:1862413-1862432 MS.gene89026:intron 55.0%
ATATGCGAGCTCAAGAGGCC+AGG - chr2.4:1862589-1862608 MS.gene89026:intron 55.0%
CACAGTGCACTTCAGAGCCT+CGG + chr2.4:1861549-1861568 None:intergenic 55.0%
CACCATCATCCGGATTGCGA+GGG + chr2.4:1861579-1861598 None:intergenic 55.0%
CACCTTCTCCGCTATCCCAT+TGG - chr2.4:1863606-1863625 MS.gene89026:intron 55.0%
CAGAGATGGAGGAAGCAAGG+TGG - chr2.4:1861925-1861944 MS.gene89026:CDS 55.0%
CAGCATCTTCAGGAGTCTCG+GGG + chr2.4:1862086-1862105 None:intergenic 55.0%
CCAAGTGTGATGTCTCCTCC+TGG + chr2.4:1861394-1861413 None:intergenic 55.0%
CCACCCAATACCTCCTCAAC+AGG + chr2.4:1860986-1861005 None:intergenic 55.0%
CCAGCCTCATAGATGTTGGG+AGG - chr2.4:1861267-1861286 MS.gene89026:CDS 55.0%
CCAGGAGGAGACATCACACT+TGG - chr2.4:1861391-1861410 MS.gene89026:CDS 55.0%
CCATGAATCTGACCCCTTGC+AGG + chr2.4:1863432-1863451 None:intergenic 55.0%
CCCATTGGGGTTTCCAGTGA+AGG - chr2.4:1863621-1863640 MS.gene89026:intron 55.0%
CCTCCCAACATCTATGAGGC+TGG + chr2.4:1861270-1861289 None:intergenic 55.0%
CCTGCAAGGGGTCAGATTCA+TGG - chr2.4:1863429-1863448 MS.gene89026:intron 55.0%
CCTTCTCCGCTATCCCATTG+GGG - chr2.4:1863608-1863627 MS.gene89026:intron 55.0%
CTCTGTCACGCTTCCTTCAC+TGG + chr2.4:1863637-1863656 None:intergenic 55.0%
CTTCTGCCTTGGCAATCGTG+AGG - chr2.4:1862512-1862531 MS.gene89026:intron 55.0%
GACACCAAGGCTCGTGTTCT+TGG - chr2.4:1863681-1863700 MS.gene89026:CDS 55.0%
GAGCAGAGATGGAGGAAGCA+AGG - chr2.4:1861922-1861941 MS.gene89026:CDS 55.0%
GATTCAAGGAGGCCAAAGCC+AGG - chr2.4:1861373-1861392 MS.gene89026:CDS 55.0%
GCAGCATCTTCAGGAGTCTC+GGG + chr2.4:1862087-1862106 None:intergenic 55.0%
GCTAATAGGCAGCCTGCAAG+GGG - chr2.4:1863417-1863436 MS.gene89026:intron 55.0%
GGCGTACATTCCTGTTGAGG+AGG - chr2.4:1860973-1860992 MS.gene89026:CDS 55.0%
GGCTTGAAGGTCCCATTGCT+TGG - chr2.4:1861881-1861900 MS.gene89026:CDS 55.0%
GTGATGTCTCCTCCTGGCTT+TGG + chr2.4:1861388-1861407 None:intergenic 55.0%
TGGGACCTTCAAGCCTTGAG+TGG + chr2.4:1861876-1861895 None:intergenic 55.0%
TTGACGGTGGAGCAGCTTTC+GGG - chr2.4:1862058-1862077 MS.gene89026:intron 55.0%
!! AGAACACGAGCCTTGGTGTC+AGG + chr2.4:1863681-1863700 None:intergenic 55.0%
!! CAATGGGATAGCGGAGAAGG+TGG + chr2.4:1863608-1863627 None:intergenic 55.0%
!! CCTGTTGAGGAGGTATTGGG+TGG - chr2.4:1860983-1861002 MS.gene89026:CDS 55.0%
!! GAACACGAGCCTTGGTGTCA+GGG + chr2.4:1863680-1863699 None:intergenic 55.0%
!! TGAGGAGGTATTGGGTGGTG+AGG - chr2.4:1860988-1861007 MS.gene89026:CDS 55.0%
!! TGCTATGCGTGGAGTGCTGA+TGG - chr2.4:1862231-1862250 MS.gene89026:intron 55.0%
!! TGGTGGTTGGGATTGGTCCA+TGG - chr2.4:1859749-1859768 MS.gene89026:intron 55.0%
CCACCATCATCCGGATTGCG+AGG + chr2.4:1861580-1861599 None:intergenic 60.0%
CTGCCTTGGCAATCGTGAGG+TGG - chr2.4:1862515-1862534 MS.gene89026:intron 60.0%
GTGGTTCCCATGTGGCCTGA+GGG - chr2.4:1862357-1862376 MS.gene89026:intron 60.0%
TCAAGGAGGCCAAAGCCAGG+AGG - chr2.4:1861376-1861395 MS.gene89026:CDS 60.0%
TCCGCCAAGAACACGAGCCT+TGG + chr2.4:1863688-1863707 None:intergenic 60.0%
TGACACAGACACCGGACGGA+TGG - chr2.4:1859181-1859200 MS.gene89026:CDS 60.0%
TGCCCTCGCAATCCGGATGA+TGG - chr2.4:1861574-1861593 MS.gene89026:CDS 60.0%
TGCTGACGTGTCCATCCGTC+CGG + chr2.4:1859195-1859214 None:intergenic 60.0%
TGTGGTTCCCATGTGGCCTG+AGG - chr2.4:1862356-1862375 MS.gene89026:intron 60.0%
! CCTCGCAATCCGGATGATGG+TGG - chr2.4:1861577-1861596 MS.gene89026:CDS 60.0%
! GCACTGACACAGACACCGGA+CGG - chr2.4:1859177-1859196 MS.gene89026:CDS 60.0%
!! CCCCAATGGGATAGCGGAGA+AGG + chr2.4:1863611-1863630 None:intergenic 60.0%
!! GATAGCGGAGAAGGTGGCCA+GGG + chr2.4:1863602-1863621 None:intergenic 60.0%
!! GCACTTTCTGGGACACCCTC+AGG + chr2.4:1862375-1862394 None:intergenic 60.0%
GGGACACCCTCAGGCCACAT+GGG + chr2.4:1862366-1862385 None:intergenic 65.0%
TGGGACACCCTCAGGCCACA+TGG + chr2.4:1862367-1862386 None:intergenic 65.0%
! GGAAGCGTGACAGAGCTGCC+AGG - chr2.4:1863642-1863661 MS.gene89026:intron 65.0%
!! GGATAGCGGAGAAGGTGGCC+AGG + chr2.4:1863603-1863622 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr2.4 gene 1858953 1863743 1858953 ID=MS.gene89026
chr2.4 mRNA 1858953 1863743 1858953 ID=MS.gene89026.t1;Parent=MS.gene89026
chr2.4 exon 1863651 1863743 1863651 ID=MS.gene89026.t1.exon1;Parent=MS.gene89026.t1
chr2.4 CDS 1863651 1863743 1863651 ID=cds.MS.gene89026.t1;Parent=MS.gene89026.t1
chr2.4 exon 1860048 1861950 1860048 ID=MS.gene89026.t1.exon2;Parent=MS.gene89026.t1
chr2.4 CDS 1860048 1861950 1860048 ID=cds.MS.gene89026.t1;Parent=MS.gene89026.t1
chr2.4 exon 1858953 1859386 1858953 ID=MS.gene89026.t1.exon3;Parent=MS.gene89026.t1
chr2.4 CDS 1858953 1859386 1858953 ID=cds.MS.gene89026.t1;Parent=MS.gene89026.t1
Gene Sequence

>MS.gene89026

ATGGCGCAAATTCTGCTACATGGAACTCTTCATGCTACAATCTTTGAGGTCGATAAACTCAAGAATATTAGTGGTGGTAACATTCTTTCCAAGGTGCTTCTTTTCTTCCTTTTTTTTTTTTTTGGCTTTTATTATCATTTTTTCAACTACTTGCTAACTGTTTTTTTACTTAACTTAGTTCTTATGTTTCTGTTATTTGTTTGTTGTACGGTTAGATCTATGAAGCACTGACACAGACACCGGACGGATGGACACGTCAGCACTGATAATATAAATTAATTGAATGTAATCACTAGTGTCTGTCGCGCACACACGCATTCAATCAGAAGTATCGGTGCTACTGAGATTAGATCATATAATTTAACAAAATTAGTGCAGTAGTTTGTTGTTAATCTCATCAATTGTGATTCAGATTTCATGATCAATAATTCAATCTGAAATTTTGTTAGGTTAATTGTAATTTTTAGTAGAGTTTTGCCACTGTTTTGGCTTCATCTCTAATCTTCAAATCTGTGATCAGCTTGATGAGATTTGTTCTTTCAAACATGGAGATTGAATTTTCTTTGATCTTTGACTTGTAGCTTGTTGACTTTTCACGCCTTATCAGAAAGACTTGAACTGATAAACTCATAAATGTTTGAATGGTAGTGAAGGACTAGTTAGTTGGAAGGATAAAGGATTTATTTTTTTTTCTTTTTAAGTCCGAAGATTTGATTTTTATTTTTTTATTTTTTGTGAAAAAGAAAAAGGGAAAAAATTAGATTGTAAGAATGAAAAAAGGGAAAGTGTAAAGAGATGGTGGTTGGGATTGGTCCATGGATAAGACAGAAGTTCATCAAGGCAAGAATATGTTTCTTACCAATCACATTTAATGTTCTTTTGTACTCAGAATCTTGATTGTTTTTGCTCTCTGTGTTGGTGAAATAATTGTTAGAAGAAAATAATAAGCTAAAAAAAGTAAATCACTTTAGGCCTTTAGAAGTTTTTGGGCAAATGATTCATCACCTTGGATTTTTATAATATCGCCAATTGTATGGCTAGGCTTCTAATAACAATATTTTAACGTCATTATTACTGTTGTAAATTTCTAACTGGATTGTAGAGTTTGCTAGCTATTATGTTTCAGACAGTTTATATATTCATTTAGATTATTAGGGATCACATAATGTTTTGCTACTTCAAATGTTTAATGTTTGATTTTAATTGTGAAGGGAAAGTTTTTACAATGTTCTGCTTCCTTAATTTGTTCATTTGAATCTATTTGTCACCTGTCGGCCTGAAATTAAAATGACCTTTTGTTCATTAAGCTGGTCTTTCAACTCAATAACTTCAAATTTTATCATACTTATCCTTTATCCTGCATATGCTATGTTTTATCCCAAAAAACATGAACACATATGAACTCAAAGGAAACAAACCTGGATCTTTGTTAGGTTTGTGTTAGTAGCTTGACTTCATCCTTATCGAAGCCTCTGATGGGATATTTTTAAGAATGGGTTTGAATGCTTTACCTTAACAATCTATTCTTTTGATCTTAACCTTGTTCATTTTAGGGTAGACTTTTGCTTGGAGCTCCCTTCGTTTTAGCATAAGTGCATGCATATTTTTACTGAAGATCATCCACTTATGTTTACATGCGTTAGTACCTGATGAAAATATTTTTGTTTCACTTTTGTACCTTTATTACATGATGGAAGGATAATTTTTCACTTTTGGACCTTTATTTCCCATGTGCGTCGTTGTTGATTGTTGATTTATGTGTTGCTAATTACATTCACTTATTCTTTTTTTAGATAAGACAAAACTTTGAGGAGACAGTTGGATTCGGAAAAGGAACTACCAAACTTTATGCAACCATTGATTTAGAGAAAGCACGAGTGGGAAGGACCAGAATCATAGAAAAGGAGCATGTTAATCCTCAATGGAATGAGTCTTTTCACATTTACTGTGCCCATTTGGCATCGGATATCATATTCACTGTGAAAGATGATAATCCTATTGGGGCAACCTTAATTGGAAGGGCGTACATTCCTGTTGAGGAGGTATTGGGTGGTGAGGAAATAGATAGGTGGGTTGAAATATTGGATGTGAATAAAGAACCAATTCATGGAAATTCAAAGATCCATGTGAAGCTGCAATTTTTTGATGTTTCAAAAGACCGCAACTGGGCTCTAGGCATTAGAAGTCCTAAATTTCCTGGAGTTCCTTATGCTTTCTACACACAAAGACAAGGTTGTAAGGTTTCTCTGTACCAAGATTCTCATATCCCAGACAATTTTGTCCCCAATATACAACTTGCAGGAGGTCAGACTTACCAGCCTCATAGATGTTGGGAGGATGTTTTTGATGCAATCACAAAAGCAAGGCACTTAATATACATTACAGGGTGGTCTGTTTATACTGAGATTTCCTTGGTAAGGGATTCAAGGAGGCCAAAGCCAGGAGGAGACATCACACTTGGTGAGCTTCTCAAGAAAAAAGCACAAGAAGGTGTTAGGGTATTAATGCTTGTTTGGGATGATAGAACGTCGGTTCCTCTGTTAAAAAAAGATGGGTTGATGGCTACTCATGATCAAGAAACTGAGGAATTCTTCCGAGGCTCTGAAGTGCACTGTGTCTTATGCCCTCGCAATCCGGATGATGGTGGAAGCATTGTCCAGAATATAGAAATTGGCACCATGTTTACTCATCATCAGAAAATTTTGGTGGTGGACAGTGAGTTGCCAAATGAAGTGGGATTAAATAAACGAAGAATTGTGAGTTTTGTAGGAGGCATTGATCTCTGTGATGGAAGATATGATACCCCGTTTCATTCACTTTTCCGAACTCTGGACACAGCACATCATGATGACTTTCATCAGCCTAACTTTCCTGGTGCTTCAATAGAAAAAGGTGGTCCTAGGGAACCTTGGCATGATATCCACTCAAGGCTTGAAGGTCCCATTGCTTGGGATGTTTTGTTTAACTTTGAGCAGAGATGGAGGAAGCAAGGTGGAAAGGACTTGCTTGTTCCTCTGAGAGAGCTTGAAGATGCCATTATTACCCCATCCCCAGTAACTTTCCCTGATGATCAAGAGACGTGGAATGTTCAGCTATTTAGATCTATTGACGGTGGAGCAGCTTTCGGGTTCCCCGAGACTCCTGAAGATGCTGCTAAAGCTGGGCTTATTAGTGGGAAGGATAACATAATAGATAGGAGTATTCAAGATGCTTATATCAATGCTATTCGACGCGCAAAGAATTTCATCTACATTGAAAATCAATATTTCCTTGGAAGTTGCTATGCGTGGAGTGCTGATGGTATTAAGCCTGAAGACATTGGTGCTTTGCATCTGATCCCAAAAGAGCTTTCACTTAAGATTGTTAGCAAGATTGAAGCTGGGGAAAGGTTCACTGTGTATGTTGTGGTTCCCATGTGGCCTGAGGGTGTCCCAGAAAGTGCATCAGTTCAGGCAATATTAGACTGGCAGAGGAGGACAATGGATATGATGTACAAAGATATTATTGAAGCACTCAATGCCAAGGGAATTGAGGAAGATCCTCGGAACTATTTGTCGTTCTTCTGCCTTGGCAATCGTGAGGTGGTAAAACAAGGAGAGTACGAGCCTCCTGAAAGACCAGAACCTGATTCAGATTATATGCGAGCTCAAGAGGCCAGGCGTTTCATGATTTATGTTCATGCCAAGATGATGATAGGTAAGTAAAAACATTAAGCTGCCATATTTTGTATAACATTCCTTCTAACACTTTCTTTCCAATACTTTTTTTATGATTGAGCAATGTTCACATGGGTCTCCTTTCCTATTTAGTAGGTCTCCTTTTCAAAATGATTGAGACCCAGATGAATTTTACTCAAACCTCACTCGCTCATCATATAGTAGTCGAGCAATTCTGCAAGCTACACAATTCTCACGCAGAATTTTGATTTTAAAGTTATTTGTAGGATAAAAGGAAAAAAAATACTTTATTCTAATTATTCATTGGGTAGTGTTAACTTGTGCCCTCAGGGCACAAGTTAAGAATCTAAAAATGGAATTAAATAATCAATTTTGTCTTGAAAAGATAAGATTTCAAATTTCAAGAATATTGAATGCACAATTTCCAATAAAATATTTCTATTTTTGGCTTCTTAACTTGTGCCTTGAGGGCACAAGATAACATTTCCCTTATTCATTTAGATAAGTTGGTCCACATTTGGACAAAAAAAATTCTTGAGAAGTTTTTTTACTCTTTCAACAAATTTGAGATTAATAAAAGAAAGCTGGTAAGTGTTACAATATCCCTTTTCCTTCACCAAGAAAATATCCTTTGATGGTAGGAGTTCATAGTGTGGTAAAACTAAGTTTGTTGTTTGCAGTTGATGATGAATACATAATCGTCGGATCTGCCAACATCAACCAAAGATCAATGGATGGTGCTAGAGACTCTGAAATTGCAATGGGAGCTTATCAACCCTATCATTTAGCTAATAGGCAGCCTGCAAGGGGTCAGATTCATGGTTTCCGCATGTCGTTGTGGTATGAGCACCTTGGCATGCTTCAAGAAACCTTCCTTCACCCAGAAAGTGAAGAATGCATTAGGAAGGTGAACCAGATTGCTGACAAATATTGGGATCTCTATTCTAGCGAGACTCTTGAGCATGATCTCCCTGGCCACCTTCTCCGCTATCCCATTGGGGTTTCCAGTGAAGGAAGCGTGACAGAGCTGCCAGGATTTGAATTCTTCCCTGACACCAAGGCTCGTGTTCTTGGCGGAAAAGTTGATTACCTCCCACCCATACTTACTACTTAG
Protein sequence

>MS.gene89026.t1

MAQILLHGTLHATIFEVDKLKNISGGNILSKIRQNFEETVGFGKGTTKLYATIDLEKARVGRTRIIEKEHVNPQWNESFHIYCAHLASDIIFTVKDDNPIGATLIGRAYIPVEEVLGGEEIDRWVEILDVNKEPIHGNSKIHVKLQFFDVSKDRNWALGIRSPKFPGVPYAFYTQRQGCKVSLYQDSHIPDNFVPNIQLAGGQTYQPHRCWEDVFDAITKARHLIYITGWSVYTEISLVRDSRRPKPGGDITLGELLKKKAQEGVRVLMLVWDDRTSVPLLKKDGLMATHDQETEEFFRGSEVHCVLCPRNPDDGGSIVQNIEIGTMFTHHQKILVVDSELPNEVGLNKRRIVSFVGGIDLCDGRYDTPFHSLFRTLDTAHHDDFHQPNFPGASIEKGGPREPWHDIHSRLEGPIAWDVLFNFEQRWRKQGGKDLLVPLRELEDAIITPSPVTFPDDQETWNVQLFRSIDGGAAFGFPETPEDAAKAGLISGKDNIIDRSIQDAYINAIRRAKNFIYIENQYFLGSCYAWSADGIKPEDIGALHLIPKELSLKIVSKIEAGERFTVYVVVPMWPEGVPESASVQAILDWQRRTMDMMYKDIIEALNAKGIEEDPRNYLSFFCLGNREVVKQGEYEPPERPEPDSDYMRAQEARRFMIYVHAKMMIVDDEYIIVGSANINQRSMDGARDSEIAMGAYQPYHLANRQPARGQIHGFRMSLWYEHLGMLQETFLHPESEECIRKVNQIADKYWDLYSSETLEHDLPGHLLRYPIGVSSEGSVTELPGFEFFPDTKARVLGGKVDYLPPILTT