Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene90227.t1 | XP_003608398.2 | 98.2 | 166 | 3 | 0 | 177 | 342 | 1 | 166 | 3.30E-84 | 322 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene90227.t1 | A0A072UQ66 | 98.2 | 166 | 3 | 0 | 177 | 342 | 1 | 166 | 2.4e-84 | 322.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050386 | MS.gene90227 | 0.8092 | 2.13E-50 | -1.69E-46 |
MS.gene050838 | MS.gene90227 | 0.851079 | 1.12E-60 | -1.69E-46 |
MS.gene051003 | MS.gene90227 | 0.80424 | 2.38E-49 | -1.69E-46 |
MS.gene051233 | MS.gene90227 | 0.812002 | 5.28E-51 | -1.69E-46 |
MS.gene051234 | MS.gene90227 | 0.816899 | 4.36E-52 | -1.69E-46 |
MS.gene051343 | MS.gene90227 | 0.82631 | 2.91E-54 | -1.69E-46 |
MS.gene051902 | MS.gene90227 | 0.820509 | 6.61E-53 | -1.69E-46 |
MS.gene052072 | MS.gene90227 | 0.819662 | 1.03E-52 | -1.69E-46 |
MS.gene055424 | MS.gene90227 | 0.807565 | 4.75E-50 | -1.69E-46 |
MS.gene056580 | MS.gene90227 | 0.808326 | 3.27E-50 | -1.69E-46 |
MS.gene057094 | MS.gene90227 | 0.805391 | 1.37E-49 | -1.69E-46 |
MS.gene057234 | MS.gene90227 | 0.810206 | 1.29E-50 | -1.69E-46 |
MS.gene057999 | MS.gene90227 | 0.80281 | 4.70E-49 | -1.69E-46 |
MS.gene058054 | MS.gene90227 | 0.812306 | 4.53E-51 | -1.69E-46 |
MS.gene058074 | MS.gene90227 | 0.850738 | 1.40E-60 | -1.69E-46 |
MS.gene059146 | MS.gene90227 | 0.814634 | 1.39E-51 | -1.69E-46 |
MS.gene059171 | MS.gene90227 | 0.842035 | 3.31E-58 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene90227.t1 | MTR_4g093680 | 98.193 | 166 | 3 | 0 | 177 | 342 | 1 | 166 | 2.46e-117 | 336 |
MS.gene90227.t1 | MTR_4g093680 | 98.765 | 162 | 2 | 0 | 181 | 342 | 1 | 162 | 8.48e-115 | 330 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene90227.t1 | AT3G15351 | 64.848 | 165 | 58 | 0 | 177 | 341 | 1 | 165 | 1.90e-74 | 227 |
MS.gene90227.t1 | AT3G15351 | 64.848 | 165 | 58 | 0 | 177 | 341 | 1 | 165 | 1.90e-74 | 227 |
MS.gene90227.t1 | AT3G15351 | 67.883 | 137 | 44 | 0 | 205 | 341 | 1 | 137 | 1.79e-65 | 203 |
MS.gene90227.t1 | AT3G15351 | 67.883 | 137 | 44 | 0 | 205 | 341 | 1 | 137 | 1.79e-65 | 203 |
MS.gene90227.t1 | AT3G15351 | 67.883 | 137 | 44 | 0 | 205 | 341 | 1 | 137 | 1.79e-65 | 203 |
MS.gene90227.t1 | AT3G15351 | 65.517 | 116 | 40 | 0 | 177 | 292 | 1 | 116 | 2.03e-50 | 164 |
MS.gene90227.t1 | AT3G15351 | 65.517 | 116 | 40 | 0 | 177 | 292 | 1 | 116 | 2.03e-50 | 164 |
Find 89 sgRNAs with CRISPR-Local
Find 384 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTACTTTGGTTTGTCATTTA+AGG | 0.078027 | 4.2:-19924313 | None:intergenic |
CTCTTCCAATTGATTGAATT+TGG | 0.153302 | 4.2:-19920047 | None:intergenic |
TCAATAATGAAGGGAGTTTC+AGG | 0.209420 | 4.2:+19923102 | MS.gene90227:CDS |
GAGTTTCTCTTCATCAAATA+TGG | 0.260234 | 4.2:+19921586 | MS.gene90227:CDS |
ACTAGTGTTCCATCTCCTTT+TGG | 0.261648 | 4.2:+19923078 | MS.gene90227:CDS |
AATGATCCTGTGTTTGCTTT+AGG | 0.277541 | 4.2:+19921166 | MS.gene90227:CDS |
GTCTCTATTTGCTTCTGTTT+CGG | 0.303300 | 4.2:+19921460 | MS.gene90227:CDS |
ACTTACTGCGCTAAGGAAAA+AGG | 0.313466 | 4.2:+19923041 | MS.gene90227:CDS |
AAAGTAGAAGCTGCAGGCTT+TGG | 0.324527 | 4.2:+19920274 | MS.gene90227:CDS |
CCATGCTGCTCATACTATAT+TGG | 0.329660 | 4.2:+19923239 | MS.gene90227:CDS |
GTTTGCTTTAGGAATGGATT+TGG | 0.333496 | 4.2:+19921177 | MS.gene90227:CDS |
ATTCTCTAGTCAGCTCCCTC+TGG | 0.367080 | 4.2:+19919959 | MS.gene90227:intron |
TCAAAAGAAATTAACAAAGT+TGG | 0.373892 | 4.2:+19921628 | MS.gene90227:CDS |
GGCTACCAAATTCAATCAAT+TGG | 0.382974 | 4.2:+19920042 | MS.gene90227:CDS |
GAGGAGGAGGCAGAGGAGAT+TGG | 0.384611 | 4.2:+19918680 | MS.gene90227:CDS |
TTTGCTTTAGGAATGGATTT+GGG | 0.396946 | 4.2:+19921178 | MS.gene90227:CDS |
CCCACAAACAGATCCGTTCC+TGG | 0.403188 | 4.2:-19923207 | None:intergenic |
GCTCATACTATATTGGAAAC+AGG | 0.413226 | 4.2:+19923246 | MS.gene90227:CDS |
AAGTAGAAGCTGCAGGCTTT+GGG | 0.413563 | 4.2:+19920275 | MS.gene90227:CDS |
GTAGCATATCCTGGTATTGC+TGG | 0.421370 | 4.2:-19918638 | None:intergenic |
CAGACGTGGACGATGTTTCC+AGG | 0.423557 | 4.2:+19923189 | MS.gene90227:CDS |
TTCTCTAGTCAGCTCCCTCT+GGG | 0.423843 | 4.2:+19919960 | MS.gene90227:intron |
TCAAGCAGAGCTAGACTTTG+AGG | 0.425248 | 4.2:+19924188 | MS.gene90227:CDS |
AGGGACCGGCTCAAGACCTT+TGG | 0.427156 | 4.2:+19923122 | MS.gene90227:CDS |
TTGTAGAGCTTTACCCCAAA+GGG | 0.436790 | 4.2:-19919133 | None:intergenic |
CCAGGAACGGATCTGTTTGT+GGG | 0.437602 | 4.2:+19923207 | MS.gene90227:CDS |
GGACAAATCGTATCTTATAT+CGG | 0.442490 | 4.2:+19924236 | MS.gene90227:CDS |
CTGAAAGACAAGAAGCTTGA+AGG | 0.448939 | 4.2:+19920247 | MS.gene90227:CDS |
TTGATAAGGTTCAAAATTGA+AGG | 0.451336 | 4.2:+19920220 | MS.gene90227:intron |
AGAATGATAAGTTGAGGAAT+GGG | 0.455119 | 4.2:+19923007 | MS.gene90227:CDS |
ACGGTGGTCCGGTGGTGGTT+CGG | 0.455201 | 4.2:-19919999 | None:intergenic |
AGCACAAACGCATCTTACTT+TGG | 0.466075 | 4.2:-19924327 | None:intergenic |
GAGAATGATAAGTTGAGGAA+TGG | 0.468450 | 4.2:+19923006 | MS.gene90227:CDS |
TCCAGGAACGGATCTGTTTG+TGG | 0.468587 | 4.2:+19923206 | MS.gene90227:CDS |
TGAGAGTAACATGAATGATT+TGG | 0.474672 | 4.2:+19918605 | None:intergenic |
TGCTGATAACGAAGAGTATG+AGG | 0.475757 | 4.2:+19918661 | MS.gene90227:CDS |
AGAGTATGAGGAGGAGGCAG+AGG | 0.477913 | 4.2:+19918673 | MS.gene90227:CDS |
CCCTTCATTATTGATCCAAA+AGG | 0.482045 | 4.2:-19923093 | None:intergenic |
AATTGAAATTACCTGATGTC+GGG | 0.487437 | 4.2:-19921678 | None:intergenic |
ACAAGTGATTTAAGCACTCC+TGG | 0.488807 | 4.2:-19924288 | None:intergenic |
GCAGAGGAGATTGGTGTTTG+AGG | 0.489110 | 4.2:+19918689 | MS.gene90227:CDS |
AAATGACGGTGGTCCGGTGG+TGG | 0.490194 | 4.2:-19920004 | None:intergenic |
ATTATTGATCCAAAAGGAGA+TGG | 0.506007 | 4.2:-19923087 | None:intergenic |
AGAAGAGGGAGGCGCCCAGA+GGG | 0.506512 | 4.2:-19919974 | None:intergenic |
TCTTCTCACCGAACCACCAC+CGG | 0.509896 | 4.2:+19919991 | MS.gene90227:CDS |
TCCTGTGTTTGCTTTAGGAA+TGG | 0.514232 | 4.2:+19921171 | MS.gene90227:CDS |
GACCACCGTCATTTCACCAC+TGG | 0.517861 | 4.2:+19920013 | MS.gene90227:CDS |
TCATTTCACCACTGGATCAC+CGG | 0.531159 | 4.2:+19920021 | MS.gene90227:CDS |
TAACGAAGAGTATGAGGAGG+AGG | 0.535210 | 4.2:+19918667 | MS.gene90227:CDS |
TAGGAATGGATTTGGGATCC+CGG | 0.537848 | 4.2:+19921185 | MS.gene90227:CDS |
GTGGTGGTTCGGTGAGAAGA+GGG | 0.538086 | 4.2:-19919988 | None:intergenic |
AAATTGAAATTACCTGATGT+CGG | 0.539059 | 4.2:-19921679 | None:intergenic |
GTGGTGAAATGACGGTGGTC+CGG | 0.541158 | 4.2:-19920010 | None:intergenic |
GAGAAGAGGGAGGCGCCCAG+AGG | 0.541203 | 4.2:-19919975 | None:intergenic |
TCGTATCTTATATCGGAGAC+AGG | 0.543379 | 4.2:+19924243 | MS.gene90227:CDS |
ATGAAGGGAGTTTCAGGGAC+CGG | 0.544514 | 4.2:+19923108 | MS.gene90227:CDS |
GGAGGAAAAGTAGAAGCTGC+AGG | 0.554496 | 4.2:+19920268 | MS.gene90227:CDS |
AATTGATTGAATTTGGTAGC+CGG | 0.554956 | 4.2:-19920040 | None:intergenic |
CTCGCCGACTTGATAAGTCC+AGG | 0.558678 | 4.2:+19924270 | MS.gene90227:CDS |
GTCTGAGTACCAGCAATACC+AGG | 0.558885 | 4.2:+19918629 | MS.gene90227:CDS |
ATTGTAGAGCTTTACCCCAA+AGG | 0.561088 | 4.2:-19919134 | None:intergenic |
GCATCAAGAGAAGCTAATAC+AGG | 0.566410 | 4.2:+19920297 | MS.gene90227:CDS |
TTATCAGCAGTAGCATATCC+TGG | 0.572062 | 4.2:-19918647 | None:intergenic |
ATAGTATGAGCAGCATGGAA+TGG | 0.572079 | 4.2:-19923234 | None:intergenic |
CAATAATGAAGGGAGTTTCA+GGG | 0.573409 | 4.2:+19923103 | MS.gene90227:CDS |
GGTGGTGGTTCGGTGAGAAG+AGG | 0.574140 | 4.2:-19919989 | None:intergenic |
CTCAAGACCTTTGGTACAAG+AGG | 0.575916 | 4.2:+19923131 | MS.gene90227:CDS |
GAGAAGCACTTACTGCGCTA+AGG | 0.586980 | 4.2:+19923034 | MS.gene90227:CDS |
GTACACACCTCTTGTACCAA+AGG | 0.594929 | 4.2:-19923138 | None:intergenic |
GTGAAATGACGGTGGTCCGG+TGG | 0.604453 | 4.2:-19920007 | None:intergenic |
AAAAGAGTCATGGTTACCAC+AGG | 0.607673 | 4.2:-19923163 | None:intergenic |
TTGTACCAAAGGTCTTGAGC+CGG | 0.607952 | 4.2:-19923127 | None:intergenic |
TCCATTCCTAAAGCAAACAC+AGG | 0.616710 | 4.2:-19921172 | None:intergenic |
GTGGACGATGTTTCCAGGAA+CGG | 0.618017 | 4.2:+19923194 | MS.gene90227:CDS |
GTGATCCAGTGGTGAAATGA+CGG | 0.618475 | 4.2:-19920018 | None:intergenic |
CCAATATAGTATGAGCAGCA+TGG | 0.625866 | 4.2:-19923239 | None:intergenic |
AAAGACAAGAAGCTTGAAGG+AGG | 0.625936 | 4.2:+19920250 | MS.gene90227:CDS |
ACGTCTGCTCAAAAGAGTCA+TGG | 0.629211 | 4.2:-19923173 | None:intergenic |
GTGGTTCGGTGAGAAGAGGG+AGG | 0.629968 | 4.2:-19919985 | None:intergenic |
ATTGGAAGAGTATTGAAGCA+TGG | 0.632434 | 4.2:+19920060 | MS.gene90227:CDS |
AGAGTCATGGTTACCACAGG+TGG | 0.635237 | 4.2:-19923160 | None:intergenic |
CAAGAGGTGTGTACCACCTG+TGG | 0.640714 | 4.2:+19923147 | MS.gene90227:CDS |
GAAACTACAGAGCATTGTGA+AGG | 0.641865 | 4.2:+19924215 | MS.gene90227:CDS |
TGGTTGAGAATGATAAGTTG+AGG | 0.646660 | 4.2:+19923001 | MS.gene90227:CDS |
ACACAGAGGCTGCACAGTCA+AGG | 0.647492 | 4.2:-19921486 | None:intergenic |
CACTCCTGGACTTATCAAGT+CGG | 0.656025 | 4.2:-19924274 | None:intergenic |
TTTGGTAGCCGGTGATCCAG+TGG | 0.676317 | 4.2:-19920029 | None:intergenic |
TGATAACGAAGAGTATGAGG+AGG | 0.685392 | 4.2:+19918664 | MS.gene90227:CDS |
ATCCAGTGGTGAAATGACGG+TGG | 0.733113 | 4.2:-19920015 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAAAAAATACTAAAAAC+AGG | + | chr4.2:19919227-19919246 | MS.gene90227:intron | 10.0% |
!! | AAAAAAAAATACTAAAAACA+GGG | + | chr4.2:19919228-19919247 | MS.gene90227:intron | 10.0% |
!! | AAAATTTCTATAAAAAATAC+GGG | + | chr4.2:19919705-19919724 | MS.gene90227:intron | 10.0% |
!! | CAAAATTTCTATAAAAAATA+CGG | + | chr4.2:19919704-19919723 | MS.gene90227:intron | 10.0% |
!!! | AAAAAAATTATTTTACATGA+AGG | + | chr4.2:19919583-19919602 | MS.gene90227:intron | 10.0% |
!! | AAAATGTACTTAAACTAATT+TGG | - | chr4.2:19922034-19922053 | None:intergenic | 15.0% |
!! | AAATAAATAATGTTTGTATG+TGG | + | chr4.2:19921120-19921139 | MS.gene90227:intron | 15.0% |
!! | AAATGTACTTAAACTAATTT+GGG | - | chr4.2:19922033-19922052 | None:intergenic | 15.0% |
!! | ACTTTAACATGAAATTTATA+AGG | + | chr4.2:19919358-19919377 | MS.gene90227:intron | 15.0% |
!! | ATCAAATAAATACAACTAAA+TGG | - | chr4.2:19923414-19923433 | None:intergenic | 15.0% |
!! | CTTTAACATGAAATTTATAA+GGG | + | chr4.2:19919359-19919378 | MS.gene90227:intron | 15.0% |
!! | TAAGAAGAAAAAAAGAATTA+GGG | - | chr4.2:19920145-19920164 | None:intergenic | 15.0% |
!! | TATAAGGGTAATTTAATAAA+GGG | + | chr4.2:19919374-19919393 | MS.gene90227:intron | 15.0% |
!! | TTAAGAAGAAAAAAAGAATT+AGG | - | chr4.2:19920146-19920165 | None:intergenic | 15.0% |
!! | TTATAAGGGTAATTTAATAA+AGG | + | chr4.2:19919373-19919392 | MS.gene90227:intron | 15.0% |
!!! | AATTAGTTTAAGTACATTTT+AGG | + | chr4.2:19922034-19922053 | MS.gene90227:intron | 15.0% |
!!! | ATCTTTTCTATTAAATTAAG+TGG | + | chr4.2:19922946-19922965 | MS.gene90227:intron | 15.0% |
!!! | ATTTATCTAGTTTATAGAAA+AGG | - | chr4.2:19922168-19922187 | None:intergenic | 15.0% |
!!! | CTTTTACTAGTTAAATTATA+AGG | + | chr4.2:19920423-19920442 | MS.gene90227:intron | 15.0% |
!!! | TCTTTTCTATTAAATTAAGT+GGG | + | chr4.2:19922947-19922966 | MS.gene90227:intron | 15.0% |
!!! | TCTTTTTTTCTTCTTAATTT+TGG | + | chr4.2:19920149-19920168 | MS.gene90227:intron | 15.0% |
!!! | TGAATGAATATAAGTTATTT+TGG | - | chr4.2:19921745-19921764 | None:intergenic | 15.0% |
!!! | TTTTCTATAAACTAGATAAA+TGG | + | chr4.2:19922167-19922186 | MS.gene90227:intron | 15.0% |
!! | AAAAAAAGAATTAGGGTAAA+AGG | - | chr4.2:19920138-19920157 | None:intergenic | 20.0% |
!! | AAAAAAGAATTAGGGTAAAA+GGG | - | chr4.2:19920137-19920156 | None:intergenic | 20.0% |
!! | AAAACTAAATTTGAGTAACA+AGG | - | chr4.2:19921231-19921250 | None:intergenic | 20.0% |
!! | AGTAATATAATCTCTCTTTA+AGG | - | chr4.2:19921817-19921836 | None:intergenic | 20.0% |
!! | ATATTTATAGAAGGTAAACA+TGG | - | chr4.2:19919427-19919446 | None:intergenic | 20.0% |
!! | GATAAACAAACTAATATAAG+AGG | - | chr4.2:19923805-19923824 | None:intergenic | 20.0% |
!! | GATATATGTATTCAATTGAA+TGG | + | chr4.2:19921910-19921929 | MS.gene90227:intron | 20.0% |
!! | GTAATTTAATAAAGGGTTAA+TGG | + | chr4.2:19919381-19919400 | MS.gene90227:intron | 20.0% |
!! | TAAAGAGAGATTATATTACT+TGG | + | chr4.2:19921817-19921836 | MS.gene90227:intron | 20.0% |
!! | TCAAAAGAAATTAACAAAGT+TGG | + | chr4.2:19921628-19921647 | MS.gene90227:CDS | 20.0% |
!!! | AATTGGTTTGTATATTCTTA+CGG | + | chr4.2:19924149-19924168 | MS.gene90227:intron | 20.0% |
!!! | ACTTAATAGTTTAAAGTGAA+GGG | + | chr4.2:19923843-19923862 | MS.gene90227:intron | 20.0% |
!!! | ATAACTTCAGTCTAAAATTA+AGG | - | chr4.2:19920491-19920510 | None:intergenic | 20.0% |
!!! | ATTTTAATCATGTAATGTGA+TGG | + | chr4.2:19920580-19920599 | MS.gene90227:intron | 20.0% |
!!! | CAAATTTAGTTTTCAGTTTT+TGG | + | chr4.2:19921238-19921257 | MS.gene90227:intron | 20.0% |
!!! | GTGATCTAGAAATTATTTTT+AGG | - | chr4.2:19922820-19922839 | None:intergenic | 20.0% |
!!! | TACTTAATAGTTTAAAGTGA+AGG | + | chr4.2:19923842-19923861 | MS.gene90227:intron | 20.0% |
!!! | TATATTTTATAGGATAAACC+TGG | + | chr4.2:19919617-19919636 | MS.gene90227:intron | 20.0% |
!!! | TATTTTATTTACAACTTTGC+AGG | + | chr4.2:19921564-19921583 | MS.gene90227:intron | 20.0% |
!!! | TATTTTCAGATTAACAAACA+AGG | - | chr4.2:19920877-19920896 | None:intergenic | 20.0% |
!!! | TATTTTTAGGATTAAGTGAT+TGG | - | chr4.2:19922807-19922826 | None:intergenic | 20.0% |
!!! | TGTTTGTTAATCTGAAAATA+TGG | + | chr4.2:19920877-19920896 | MS.gene90227:intron | 20.0% |
! | AAAAAGAATTAGGGTAAAAG+GGG | - | chr4.2:19920136-19920155 | None:intergenic | 25.0% |
! | AAATGAGCTTATAGACAAAA+AGG | - | chr4.2:19924121-19924140 | None:intergenic | 25.0% |
! | AAATTGAAATTACCTGATGT+CGG | - | chr4.2:19921682-19921701 | None:intergenic | 25.0% |
! | AGCTCATTTCTATTGAAAAT+TGG | + | chr4.2:19924132-19924151 | MS.gene90227:intron | 25.0% |
! | AGTTATAGAATTTGGTACTT+TGG | + | chr4.2:19920505-19920524 | MS.gene90227:intron | 25.0% |
! | ATGTTTGTCTAGATTTCAAT+TGG | + | chr4.2:19921349-19921368 | MS.gene90227:intron | 25.0% |
! | ATTTCTATAAAAAATACGGG+TGG | + | chr4.2:19919708-19919727 | MS.gene90227:intron | 25.0% |
! | CTCAATGTAATCAATTAGAT+TGG | + | chr4.2:19922101-19922120 | MS.gene90227:intron | 25.0% |
! | GTGATAATATAATACAGGTT+TGG | + | chr4.2:19918880-19918899 | MS.gene90227:intron | 25.0% |
! | TAATGCATATAACCTAGAAA+AGG | - | chr4.2:19923511-19923530 | None:intergenic | 25.0% |
! | TAGACTGAAGTTATAGAATT+TGG | + | chr4.2:19920497-19920516 | MS.gene90227:intron | 25.0% |
! | TGTTAAAGTGACTAAGAATA+AGG | - | chr4.2:19919347-19919366 | None:intergenic | 25.0% |
! | TTATAAGGTAGTAGTAGTTT+AGG | + | chr4.2:19920438-19920457 | MS.gene90227:intron | 25.0% |
! | TTCATGTTTGAATTTACCAA+AGG | - | chr4.2:19919675-19919694 | None:intergenic | 25.0% |
! | TTGATAAGGTTCAAAATTGA+AGG | + | chr4.2:19920220-19920239 | MS.gene90227:intron | 25.0% |
! | TTTCGGTGATAATATAATAC+AGG | + | chr4.2:19918875-19918894 | MS.gene90227:intron | 25.0% |
!! | AATTTTCCCTTATTCTTACT+TGG | + | chr4.2:19920089-19920108 | MS.gene90227:intron | 25.0% |
!! | ATGTGTTTTACCTGTAATAT+AGG | - | chr4.2:19919649-19919668 | None:intergenic | 25.0% |
!! | ATTTTCCCTTATTCTTACTT+GGG | + | chr4.2:19920090-19920109 | MS.gene90227:intron | 25.0% |
!! | GTAATAAACCTGGTATTTTT+GGG | - | chr4.2:19919873-19919892 | None:intergenic | 25.0% |
!! | TTCACTATCTTTTGTATAGT+AGG | + | chr4.2:19922610-19922629 | MS.gene90227:intron | 25.0% |
!!! | AAAAGGCATTTCATATTTCA+TGG | - | chr4.2:19922151-19922170 | None:intergenic | 25.0% |
!!! | AAACTAATATAAGAGGCATT+TGG | - | chr4.2:19923798-19923817 | None:intergenic | 25.0% |
!!! | AAGTAGTGATGATTTTTCAA+GGG | - | chr4.2:19920796-19920815 | None:intergenic | 25.0% |
!!! | TCAGAAAAAAAGTATCTGTA+TGG | + | chr4.2:19921871-19921890 | MS.gene90227:intron | 25.0% |
!!! | TCTTCATGGTTATTTCTAAA+GGG | - | chr4.2:19920379-19920398 | None:intergenic | 25.0% |
!!! | TTACTTTGGTTTGTCATTTA+AGG | - | chr4.2:19924316-19924335 | None:intergenic | 25.0% |
!!! | TTATACGGAAAGTACTATAA+AGG | - | chr4.2:19921936-19921955 | None:intergenic | 25.0% |
AAAATATACAGTGCTTGTGT+AGG | + | chr4.2:19923718-19923737 | MS.gene90227:intron | 30.0% | |
AAGGGAGTTGAGTATTTATT+GGG | - | chr4.2:19922457-19922476 | None:intergenic | 30.0% | |
AATTGAAATTACCTGATGTC+GGG | - | chr4.2:19921681-19921700 | None:intergenic | 30.0% | |
AGGGTCGTAATATAGTTATA+CGG | - | chr4.2:19921951-19921970 | None:intergenic | 30.0% | |
AGGTAAAACACATTAACCTT+TGG | + | chr4.2:19919656-19919675 | MS.gene90227:intron | 30.0% | |
ATAATGTTTGTATGTGGCAA+TGG | + | chr4.2:19921126-19921145 | MS.gene90227:intron | 30.0% | |
ATGGAAAATTCCAATGACAA+TGG | - | chr4.2:19923443-19923462 | None:intergenic | 30.0% | |
ATTATTGATCCAAAAGGAGA+TGG | - | chr4.2:19923090-19923109 | None:intergenic | 30.0% | |
CAATACTAAAGATGATTGCT+TGG | + | chr4.2:19920196-19920215 | MS.gene90227:intron | 30.0% | |
CATACAAACTTAACTCTTCA+TGG | - | chr4.2:19920393-19920412 | None:intergenic | 30.0% | |
CATGAAGAGTTAAGTTTGTA+TGG | + | chr4.2:19920391-19920410 | MS.gene90227:intron | 30.0% | |
CTAGGTTATATGCATTAGTT+TGG | + | chr4.2:19923514-19923533 | MS.gene90227:intron | 30.0% | |
CTCTTCCAATTGATTGAATT+TGG | - | chr4.2:19920050-19920069 | None:intergenic | 30.0% | |
CTGGAAATAACCTATATTAC+AGG | + | chr4.2:19919636-19919655 | MS.gene90227:intron | 30.0% | |
CTTTAGTAACTACAGATCAT+GGG | - | chr4.2:19922640-19922659 | None:intergenic | 30.0% | |
GAGTTTCTCTTCATCAAATA+TGG | + | chr4.2:19921586-19921605 | MS.gene90227:CDS | 30.0% | |
GATACACTTCTGTATAAAAG+CGG | + | chr4.2:19918955-19918974 | MS.gene90227:intron | 30.0% | |
GATTGAAACACCTGAATTTA+AGG | - | chr4.2:19922862-19922881 | None:intergenic | 30.0% | |
GCTTCAAACTACAATATGAA+TGG | + | chr4.2:19918735-19918754 | MS.gene90227:intron | 30.0% | |
GGACAAATCGTATCTTATAT+CGG | + | chr4.2:19924236-19924255 | MS.gene90227:CDS | 30.0% | |
GGTTAATGGTGCTTTAATAT+AGG | + | chr4.2:19919395-19919414 | MS.gene90227:intron | 30.0% | |
GTTTCTCATATCAAGGATAA+TGG | - | chr4.2:19923555-19923574 | None:intergenic | 30.0% | |
TAAACAAAAGATCCAGTAGA+AGG | - | chr4.2:19922924-19922943 | None:intergenic | 30.0% | |
TATACGTATCAGTGCTAAAA+TGG | - | chr4.2:19921083-19921102 | None:intergenic | 30.0% | |
TGGAAAATTCCAATGACAAT+GGG | - | chr4.2:19923442-19923461 | None:intergenic | 30.0% | |
TGGTAGGTCGAAATTTATAA+GGG | + | chr4.2:19919898-19919917 | MS.gene90227:intron | 30.0% | |
TTAATCATGTAATGTGATGG+TGG | + | chr4.2:19920583-19920602 | MS.gene90227:intron | 30.0% | |
TTAGTTTACTACCAATGAAG+TGG | - | chr4.2:19922505-19922524 | None:intergenic | 30.0% | |
TTGGTAGGTCGAAATTTATA+AGG | + | chr4.2:19919897-19919916 | MS.gene90227:intron | 30.0% | |
TTTGGCAATAGAAATGAAGT+TGG | + | chr4.2:19920523-19920542 | MS.gene90227:intron | 30.0% | |
! | AAACATAATTTGCCAACGTT+TGG | - | chr4.2:19922586-19922605 | None:intergenic | 30.0% |
! | AATAGGCTGTAGTATTTTTC+TGG | + | chr4.2:19921419-19921438 | MS.gene90227:intron | 30.0% |
! | AATTGATTGAATTTGGTAGC+CGG | - | chr4.2:19920043-19920062 | None:intergenic | 30.0% |
! | AGAATGATAAGTTGAGGAAT+GGG | + | chr4.2:19923007-19923026 | MS.gene90227:CDS | 30.0% |
! | AGACAAAAGACTCTTTTAAC+TGG | - | chr4.2:19923754-19923773 | None:intergenic | 30.0% |
! | ATATGCATTAGTTTGGAATC+TGG | + | chr4.2:19923521-19923540 | MS.gene90227:intron | 30.0% |
! | ATTAGCCATATTTCTGTATG+TGG | + | chr4.2:19923388-19923407 | MS.gene90227:intron | 30.0% |
! | CAAGTAGTGATGATTTTTCA+AGG | - | chr4.2:19920797-19920816 | None:intergenic | 30.0% |
! | CCTTTTGGATCAATAATGAA+GGG | + | chr4.2:19923093-19923112 | MS.gene90227:CDS | 30.0% |
! | CTCTTATAACTTGATGACAA+AGG | + | chr4.2:19922004-19922023 | MS.gene90227:intron | 30.0% |
! | CTGAAAATATGGTGTTGAAT+GGG | + | chr4.2:19920888-19920907 | MS.gene90227:intron | 30.0% |
! | CTGTAATATAGGTTATTTCC+AGG | - | chr4.2:19919638-19919657 | None:intergenic | 30.0% |
! | GATTATTTTCCACCTTTTCT+AGG | + | chr4.2:19923496-19923515 | MS.gene90227:intron | 30.0% |
! | GGTAATAAACCTGGTATTTT+TGG | - | chr4.2:19919874-19919893 | None:intergenic | 30.0% |
! | TCCTTTTGGATCAATAATGA+AGG | + | chr4.2:19923092-19923111 | MS.gene90227:CDS | 30.0% |
! | TCTGAAAATATGGTGTTGAA+TGG | + | chr4.2:19920887-19920906 | MS.gene90227:intron | 30.0% |
! | TGAAAATATGGTGTTGAATG+GGG | + | chr4.2:19920889-19920908 | MS.gene90227:intron | 30.0% |
! | TTTTCAGAATACTCCCTAAT+AGG | - | chr4.2:19919567-19919586 | None:intergenic | 30.0% |
!! | AAAGTGCTTGTTATTTGGTT+TGG | + | chr4.2:19921036-19921055 | MS.gene90227:intron | 30.0% |
!! | AAGTGAAAGTGCTTGTTATT+TGG | + | chr4.2:19921031-19921050 | MS.gene90227:intron | 30.0% |
!! | CTCTTCATGGTTATTTCTAA+AGG | - | chr4.2:19920380-19920399 | None:intergenic | 30.0% |
!! | GTTGTCTTTTTCATGTACTT+CGG | + | chr4.2:19923354-19923373 | MS.gene90227:intron | 30.0% |
!! | TTTGCTTTAGGAATGGATTT+GGG | + | chr4.2:19921178-19921197 | MS.gene90227:CDS | 30.0% |
!!! | AGTTTTCAGTTTTTGGTTGT+GGG | + | chr4.2:19921245-19921264 | MS.gene90227:intron | 30.0% |
!!! | GGTTTTTTGTATGCCTATTA+GGG | - | chr4.2:19919501-19919520 | None:intergenic | 30.0% |
!!! | GTATTTTTGGGACAATACTT+AGG | - | chr4.2:19919861-19919880 | None:intergenic | 30.0% |
!!! | GTTTTTTCCATGAGACAAAT+AGG | + | chr4.2:19921402-19921421 | MS.gene90227:intron | 30.0% |
!!! | GTTTTTTGTATGCCTATTAG+GGG | - | chr4.2:19919500-19919519 | None:intergenic | 30.0% |
!!! | TAGTTTTCAGTTTTTGGTTG+TGG | + | chr4.2:19921244-19921263 | MS.gene90227:intron | 30.0% |
!!! | TGGTTTTTTGTATGCCTATT+AGG | - | chr4.2:19919502-19919521 | None:intergenic | 30.0% |
!!! | TTTTTTGTATGCCTATTAGG+GGG | - | chr4.2:19919499-19919518 | None:intergenic | 30.0% |
AAATGGAACGGAATGATGAA+GGG | - | chr4.2:19920727-19920746 | None:intergenic | 35.0% | |
AAATTCTTTGACACAGGCAA+GGG | - | chr4.2:19922475-19922494 | None:intergenic | 35.0% | |
AATGATCCTGTGTTTGCTTT+AGG | + | chr4.2:19921166-19921185 | MS.gene90227:CDS | 35.0% | |
AATGGCCACATACAGAAATA+TGG | - | chr4.2:19923396-19923415 | None:intergenic | 35.0% | |
AATTAAATCCTGGCCATTGA+TGG | - | chr4.2:19919818-19919837 | None:intergenic | 35.0% | |
AATTAGGGTAAAAGGGGTTT+GGG | - | chr4.2:19920130-19920149 | None:intergenic | 35.0% | |
ACAATAGTTAGTGCTGTCAA+TGG | + | chr4.2:19922277-19922296 | MS.gene90227:intron | 35.0% | |
AGCAGAAGCAATTATGTAGA+AGG | - | chr4.2:19922395-19922414 | None:intergenic | 35.0% | |
AGTATTGTCCCAAAAATACC+AGG | + | chr4.2:19919862-19919881 | MS.gene90227:intron | 35.0% | |
ATGGTGGTTGGATGATTATT+AGG | + | chr4.2:19920599-19920618 | MS.gene90227:intron | 35.0% | |
ATTTAAGCCAACCACTTCAT+TGG | + | chr4.2:19922491-19922510 | MS.gene90227:intron | 35.0% | |
CAAGGGAGTTGAGTATTTAT+TGG | - | chr4.2:19922458-19922477 | None:intergenic | 35.0% | |
CAATAATGAAGGGAGTTTCA+GGG | + | chr4.2:19923103-19923122 | MS.gene90227:CDS | 35.0% | |
CCAATCAAATATACACACAG+AGG | - | chr4.2:19921503-19921522 | None:intergenic | 35.0% | |
CCCTTCATTATTGATCCAAA+AGG | - | chr4.2:19923096-19923115 | None:intergenic | 35.0% | |
CCTCTGTGTGTATATTTGAT+TGG | + | chr4.2:19921500-19921519 | MS.gene90227:intron | 35.0% | |
GATGATTGCTTGGATTGATA+AGG | + | chr4.2:19920206-19920225 | MS.gene90227:intron | 35.0% | |
GCTCATACTATATTGGAAAC+AGG | + | chr4.2:19923246-19923265 | MS.gene90227:CDS | 35.0% | |
GCTTTAGTAACTACAGATCA+TGG | - | chr4.2:19922641-19922660 | None:intergenic | 35.0% | |
GGCTACCAAATTCAATCAAT+TGG | + | chr4.2:19920042-19920061 | MS.gene90227:CDS | 35.0% | |
GTCTCTATTTGCTTCTGTTT+CGG | + | chr4.2:19921460-19921479 | MS.gene90227:CDS | 35.0% | |
GTGTATATTTGATTGGTGTG+AGG | + | chr4.2:19921507-19921526 | MS.gene90227:intron | 35.0% | |
GTTATTGTTGTGAAAGTTCG+AGG | + | chr4.2:19924073-19924092 | MS.gene90227:intron | 35.0% | |
TAAATTCTTTGACACAGGCA+AGG | - | chr4.2:19922476-19922495 | None:intergenic | 35.0% | |
TAAATTTCGACCTACCAACT+CGG | - | chr4.2:19919895-19919914 | None:intergenic | 35.0% | |
TAAGGTGACATTCTTGTTCT+CGG | - | chr4.2:19921799-19921818 | None:intergenic | 35.0% | |
TCAATAATGAAGGGAGTTTC+AGG | + | chr4.2:19923102-19923121 | MS.gene90227:CDS | 35.0% | |
TCCTGTACTTCCTTAAATTC+AGG | + | chr4.2:19922849-19922868 | MS.gene90227:intron | 35.0% | |
TGATAAAAGCCCATTGTCAT+TGG | + | chr4.2:19923430-19923449 | MS.gene90227:intron | 35.0% | |
TGCATATAACCTAGAAAAGG+TGG | - | chr4.2:19923508-19923527 | None:intergenic | 35.0% | |
TGGCTTAAATTCTTTGACAC+AGG | - | chr4.2:19922481-19922500 | None:intergenic | 35.0% | |
TGGTTGAGAATGATAAGTTG+AGG | + | chr4.2:19923001-19923020 | MS.gene90227:CDS | 35.0% | |
TGTCAATTGTAGATAGCACA+TGG | - | chr4.2:19922672-19922691 | None:intergenic | 35.0% | |
TTAAAACCAACAACACCTCT+AGG | - | chr4.2:19921378-19921397 | None:intergenic | 35.0% | |
TTGTGGAACACTAATGAGTA+AGG | - | chr4.2:19922339-19922358 | None:intergenic | 35.0% | |
TTTACTACCAATGAAGTGGT+TGG | - | chr4.2:19922501-19922520 | None:intergenic | 35.0% | |
TTTCCAAAATACCCCCTAAT+AGG | + | chr4.2:19919485-19919504 | MS.gene90227:intron | 35.0% | |
! | AACTTTGATAACTCACAGAG+AGG | - | chr4.2:19918715-19918734 | None:intergenic | 35.0% |
! | ACCTGAATTTAAGGAAGTAC+AGG | - | chr4.2:19922853-19922872 | None:intergenic | 35.0% |
! | CGTTTTTGCATGACCTATTA+GGG | + | chr4.2:19919551-19919570 | MS.gene90227:intron | 35.0% |
! | GAGAATGATAAGTTGAGGAA+TGG | + | chr4.2:19923006-19923025 | MS.gene90227:CDS | 35.0% |
! | GAGTTTAAAGCTATGAATGG+TGG | + | chr4.2:19918849-19918868 | MS.gene90227:intron | 35.0% |
! | GCACATTGTTTCTCATATCA+AGG | - | chr4.2:19923562-19923581 | None:intergenic | 35.0% |
! | GCTGAGTTTAAAGCTATGAA+TGG | + | chr4.2:19918846-19918865 | MS.gene90227:intron | 35.0% |
! | GGAATTTTCCATCTTTGCTT+CGG | + | chr4.2:19923451-19923470 | MS.gene90227:intron | 35.0% |
! | GGGTATGCAATTTTCTGTTT+TGG | + | chr4.2:19922967-19922986 | MS.gene90227:intron | 35.0% |
! | TATATGTCTGTGTGTTTTCG+TGG | + | chr4.2:19921309-19921328 | MS.gene90227:CDS | 35.0% |
! | TTTAGTCTGGAGTTGTGTTT+GGG | - | chr4.2:19922552-19922571 | None:intergenic | 35.0% |
! | TTTTATTCTACTCTGCTCTC+AGG | + | chr4.2:19923271-19923290 | MS.gene90227:intron | 35.0% |
! | TTTTTCTGCAGACATTGCTT+AGG | + | chr4.2:19921280-19921299 | MS.gene90227:intron | 35.0% |
!! | AATACACTGACTTGTTCATG+TGG | + | chr4.2:19918793-19918812 | MS.gene90227:intron | 35.0% |
!! | ACCTTCGAGAATTTTTGGAA+GGG | + | chr4.2:19919108-19919127 | MS.gene90227:CDS | 35.0% |
!! | ATTGGAAGAGTATTGAAGCA+TGG | + | chr4.2:19920060-19920079 | MS.gene90227:CDS | 35.0% |
!! | CAATACTTAGGTGCCATTAA+TGG | - | chr4.2:19919849-19919868 | None:intergenic | 35.0% |
!! | GTTTGCTTTAGGAATGGATT+TGG | + | chr4.2:19921177-19921196 | MS.gene90227:CDS | 35.0% |
!! | TACTCTTCATTGATTCAACG+TGG | + | chr4.2:19923665-19923684 | MS.gene90227:intron | 35.0% |
!! | TCGTTTTTGCATGACCTATT+AGG | + | chr4.2:19919550-19919569 | MS.gene90227:intron | 35.0% |
!!! | GTATTTTTCTGGTTTGATGC+AGG | + | chr4.2:19921430-19921449 | MS.gene90227:intron | 35.0% |
AAAAAATACGGGTGGCACTT+TGG | + | chr4.2:19919716-19919735 | MS.gene90227:intron | 40.0% | |
AAAAGAGTCATGGTTACCAC+AGG | - | chr4.2:19923166-19923185 | None:intergenic | 40.0% | |
AAAGACAAGAAGCTTGAAGG+AGG | + | chr4.2:19920250-19920269 | MS.gene90227:CDS | 40.0% | |
AAAGATAGTCCTGACGTGTT+GGG | - | chr4.2:19922370-19922389 | None:intergenic | 40.0% | |
ACAAGTGATTTAAGCACTCC+TGG | - | chr4.2:19924291-19924310 | None:intergenic | 40.0% | |
ACACAGCAAATACCAAACGT+TGG | + | chr4.2:19922571-19922590 | MS.gene90227:intron | 40.0% | |
ACTACAGCCTATTTGTCTCA+TGG | - | chr4.2:19921412-19921431 | None:intergenic | 40.0% | |
ACTTACTGCGCTAAGGAAAA+AGG | + | chr4.2:19923041-19923060 | MS.gene90227:CDS | 40.0% | |
AGAAGCTCAAGAAAGCGAAA+TGG | - | chr4.2:19920744-19920763 | None:intergenic | 40.0% | |
AGGATAAACCAAGACCTAAG+AGG | - | chr4.2:19919086-19919105 | None:intergenic | 40.0% | |
AGTAACTACAGATCATGGGA+TGG | - | chr4.2:19922636-19922655 | None:intergenic | 40.0% | |
ATAAACCAAGACCTAAGAGG+GGG | - | chr4.2:19919083-19919102 | None:intergenic | 40.0% | |
ATAGTATGAGCAGCATGGAA+TGG | - | chr4.2:19923237-19923256 | None:intergenic | 40.0% | |
ATCCATCAACCAGAGAACTT+GGG | + | chr4.2:19922233-19922252 | MS.gene90227:intron | 40.0% | |
ATGCACAGCTTAGTCACAAA+AGG | - | chr4.2:19920977-19920996 | None:intergenic | 40.0% | |
ATGGCCAGGATTTAATTGCA+CGG | + | chr4.2:19919821-19919840 | MS.gene90227:intron | 40.0% | |
ATTGGGTTCTATGAGACCTA+GGG | - | chr4.2:19922440-19922459 | None:intergenic | 40.0% | |
ATTGTAGAGCTTTACCCCAA+AGG | - | chr4.2:19919137-19919156 | None:intergenic | 40.0% | |
CAAGAGAAGCTAATACAGGT+GGG | + | chr4.2:19920301-19920320 | MS.gene90227:intron | 40.0% | |
CAATTGTAGATAGCACATGG+TGG | - | chr4.2:19922669-19922688 | None:intergenic | 40.0% | |
CAGCATGATGAAGAGTGATA+GGG | - | chr4.2:19921970-19921989 | None:intergenic | 40.0% | |
CAGTCATGTCTTAGACTGTT+TGG | + | chr4.2:19923587-19923606 | MS.gene90227:intron | 40.0% | |
CCAAAAATTCTCGAAGGTCA+AGG | - | chr4.2:19919106-19919125 | None:intergenic | 40.0% | |
CCAATATAGTATGAGCAGCA+TGG | - | chr4.2:19923242-19923261 | None:intergenic | 40.0% | |
CCATGCTGCTCATACTATAT+TGG | + | chr4.2:19923239-19923258 | MS.gene90227:CDS | 40.0% | |
CTCAAGAAAGCGAAATGGAA+CGG | - | chr4.2:19920739-19920758 | None:intergenic | 40.0% | |
CTGAAAGACAAGAAGCTTGA+AGG | + | chr4.2:19920247-19920266 | MS.gene90227:CDS | 40.0% | |
GAAATGGAACGGAATGATGA+AGG | - | chr4.2:19920728-19920747 | None:intergenic | 40.0% | |
GAAGGGTAATGAAGGTTTCA+TGG | - | chr4.2:19920710-19920729 | None:intergenic | 40.0% | |
GAATTAGGGTAAAAGGGGTT+TGG | - | chr4.2:19920131-19920150 | None:intergenic | 40.0% | |
GATAAACCAAGACCTAAGAG+GGG | - | chr4.2:19919084-19919103 | None:intergenic | 40.0% | |
GCATCAAGAGAAGCTAATAC+AGG | + | chr4.2:19920297-19920316 | MS.gene90227:CDS | 40.0% | |
GCCAACCCAAGTAAGAATAA+GGG | - | chr4.2:19920098-19920117 | None:intergenic | 40.0% | |
GGAATGATGAAGGGTAATGA+AGG | - | chr4.2:19920718-19920737 | None:intergenic | 40.0% | |
GGATAAACCAAGACCTAAGA+GGG | - | chr4.2:19919085-19919104 | None:intergenic | 40.0% | |
GGTAATGAAGGTTTCATGGT+GGG | - | chr4.2:19920706-19920725 | None:intergenic | 40.0% | |
GGTTGAATTGAGCTTGCATT+TGG | + | chr4.2:19920170-19920189 | MS.gene90227:intron | 40.0% | |
GTCAATGGTAGATGTCTCTT+AGG | + | chr4.2:19922292-19922311 | MS.gene90227:intron | 40.0% | |
GTGAAAGGTGACATTCTTCT+AGG | - | chr4.2:19920670-19920689 | None:intergenic | 40.0% | |
TAAAAGCGGAGCTGATTGAT+AGG | + | chr4.2:19918969-19918988 | MS.gene90227:intron | 40.0% | |
TACCAACTCGGTAATAAACC+TGG | - | chr4.2:19919883-19919902 | None:intergenic | 40.0% | |
TACCAGGTTTATTACCGAGT+TGG | + | chr4.2:19919878-19919897 | MS.gene90227:intron | 40.0% | |
TATCTGTATGGCCTTCAACT+TGG | + | chr4.2:19921883-19921902 | MS.gene90227:intron | 40.0% | |
TATTGGGTTCTATGAGACCT+AGG | - | chr4.2:19922441-19922460 | None:intergenic | 40.0% | |
TCAAGAGAAGCTAATACAGG+TGG | + | chr4.2:19920300-19920319 | MS.gene90227:intron | 40.0% | |
TCATGACACCAAACACAAAC+CGG | - | chr4.2:19921207-19921226 | None:intergenic | 40.0% | |
TCCATTCCTAAAGCAAACAC+AGG | - | chr4.2:19921175-19921194 | None:intergenic | 40.0% | |
TCCCTTATTCTTACTTGGGT+TGG | + | chr4.2:19920094-19920113 | MS.gene90227:intron | 40.0% | |
TCGTATCTTATATCGGAGAC+AGG | + | chr4.2:19924243-19924262 | MS.gene90227:CDS | 40.0% | |
TTAAAGTGAAGGGTTGAGCA+TGG | + | chr4.2:19923853-19923872 | MS.gene90227:intron | 40.0% | |
TTATCAGCAGTAGCATATCC+TGG | - | chr4.2:19918650-19918669 | None:intergenic | 40.0% | |
TTGTAGAGCTTTACCCCAAA+GGG | - | chr4.2:19919136-19919155 | None:intergenic | 40.0% | |
! | ACTAGTGTTCCATCTCCTTT+TGG | + | chr4.2:19923078-19923097 | MS.gene90227:CDS | 40.0% |
! | ATATATCCCAGCCAAGTTGA+AGG | - | chr4.2:19921897-19921916 | None:intergenic | 40.0% |
! | CCTTGACCTTCGAGAATTTT+TGG | + | chr4.2:19919103-19919122 | MS.gene90227:CDS | 40.0% |
! | CTCTTGAATCTCCCTTTTTC+AGG | + | chr4.2:19920762-19920781 | MS.gene90227:intron | 40.0% |
! | GATTTCAATTGGTAGCCTAG+AGG | + | chr4.2:19921360-19921379 | MS.gene90227:intron | 40.0% |
! | GTTTAGTCTGGAGTTGTGTT+TGG | - | chr4.2:19922553-19922572 | None:intergenic | 40.0% |
! | TGATAACGAAGAGTATGAGG+AGG | + | chr4.2:19918664-19918683 | MS.gene90227:CDS | 40.0% |
! | TGCTGATAACGAAGAGTATG+AGG | + | chr4.2:19918661-19918680 | MS.gene90227:CDS | 40.0% |
!! | AGGTTTATTACCGAGTTGGT+AGG | + | chr4.2:19919882-19919901 | MS.gene90227:intron | 40.0% |
!! | GAAACTACAGAGCATTGTGA+AGG | + | chr4.2:19924215-19924234 | MS.gene90227:CDS | 40.0% |
!! | GACCTTCGAGAATTTTTGGA+AGG | + | chr4.2:19919107-19919126 | MS.gene90227:CDS | 40.0% |
!! | GCTATGAATGGTGGATGTTT+CGG | + | chr4.2:19918858-19918877 | MS.gene90227:intron | 40.0% |
!! | GGTATTTGCTGTGTTTAGTC+TGG | - | chr4.2:19922565-19922584 | None:intergenic | 40.0% |
!! | TAATGGCATGGTGCCATTAA+TGG | - | chr4.2:19919744-19919763 | None:intergenic | 40.0% |
!! | TAATTGCACGGTGCCATTAA+TGG | + | chr4.2:19919833-19919852 | MS.gene90227:intron | 40.0% |
!! | TCATGTAATGTGATGGTGGT+TGG | + | chr4.2:19920587-19920606 | MS.gene90227:intron | 40.0% |
!! | TCATTGATTCAACGTGGTTG+TGG | + | chr4.2:19923671-19923690 | MS.gene90227:intron | 40.0% |
!! | TCCTGTGTTTGCTTTAGGAA+TGG | + | chr4.2:19921171-19921190 | MS.gene90227:CDS | 40.0% |
!!! | AGGTGTTGTTGGTTTTAAGC+TGG | + | chr4.2:19921380-19921399 | MS.gene90227:intron | 40.0% |
!!! | ATGCCTATTAGGGGGTATTT+TGG | - | chr4.2:19919491-19919510 | None:intergenic | 40.0% |
AAAGGGGTTTGGGTCACATA+CGG | - | chr4.2:19920120-19920139 | None:intergenic | 45.0% | |
AAAGTAGAAGCTGCAGGCTT+TGG | + | chr4.2:19920274-19920293 | MS.gene90227:CDS | 45.0% | |
AACTCACACCGAAGCAAAGA+TGG | - | chr4.2:19923462-19923481 | None:intergenic | 45.0% | |
AAGTAGAAGCTGCAGGCTTT+GGG | + | chr4.2:19920275-19920294 | MS.gene90227:CDS | 45.0% | |
AATGTGTGGCCCTGATCTAA+TGG | - | chr4.2:19919761-19919780 | None:intergenic | 45.0% | |
ACACATCACACACACACTTG+AGG | - | chr4.2:19919785-19919804 | None:intergenic | 45.0% | |
ACGTCTGCTCAAAAGAGTCA+TGG | - | chr4.2:19923176-19923195 | None:intergenic | 45.0% | |
AGCGAATGACATGAGTCAGT+TGG | - | chr4.2:19922768-19922787 | None:intergenic | 45.0% | |
AGGGAGTCGTTTCCTGAAAA+AGG | - | chr4.2:19920777-19920796 | None:intergenic | 45.0% | |
ATATCGTTTCCCAACACGTC+AGG | + | chr4.2:19922358-19922377 | MS.gene90227:intron | 45.0% | |
CAAAGATAGTCCTGACGTGT+TGG | - | chr4.2:19922371-19922390 | None:intergenic | 45.0% | |
CAATGCACAATGTCCCACAT+CGG | + | chr4.2:19918912-19918931 | MS.gene90227:intron | 45.0% | |
CACTCCTGGACTTATCAAGT+CGG | - | chr4.2:19924277-19924296 | None:intergenic | 45.0% | |
CATGACACCAAACACAAACC+GGG | - | chr4.2:19921206-19921225 | None:intergenic | 45.0% | |
CCAGCATGATGAAGAGTGAT+AGG | - | chr4.2:19921971-19921990 | None:intergenic | 45.0% | |
CCTATCACTCTTCATCATGC+TGG | + | chr4.2:19921968-19921987 | MS.gene90227:intron | 45.0% | |
CGTGTTGGGAAACGATATTG+TGG | - | chr4.2:19922356-19922375 | None:intergenic | 45.0% | |
CTATTTCCAAACCCCCTCTT+AGG | + | chr4.2:19919069-19919088 | MS.gene90227:intron | 45.0% | |
CTCAAGACCTTTGGTACAAG+AGG | + | chr4.2:19923131-19923150 | MS.gene90227:CDS | 45.0% | |
GATCCATCAACCAGAGAACT+TGG | + | chr4.2:19922232-19922251 | MS.gene90227:intron | 45.0% | |
GCCCTTCCAAAAATTCTCGA+AGG | - | chr4.2:19919112-19919131 | None:intergenic | 45.0% | |
GGCCAACCCAAGTAAGAATA+AGG | - | chr4.2:19920099-19920118 | None:intergenic | 45.0% | |
GGGAGTCGTTTCCTGAAAAA+GGG | - | chr4.2:19920776-19920795 | None:intergenic | 45.0% | |
GGGTAATGAAGGTTTCATGG+TGG | - | chr4.2:19920707-19920726 | None:intergenic | 45.0% | |
GTACACACCTCTTGTACCAA+AGG | - | chr4.2:19923141-19923160 | None:intergenic | 45.0% | |
GTAGCATATCCTGGTATTGC+TGG | - | chr4.2:19918641-19918660 | None:intergenic | 45.0% | |
GTGATCCAGTGGTGAAATGA+CGG | - | chr4.2:19920021-19920040 | None:intergenic | 45.0% | |
GTGGTGCTCGTATGAAATTG+AGG | + | chr4.2:19918812-19918831 | MS.gene90227:intron | 45.0% | |
GTGTGTGTGATGTGTGTGTT+GGG | + | chr4.2:19919790-19919809 | MS.gene90227:intron | 45.0% | |
TCAAGCAGAGCTAGACTTTG+AGG | + | chr4.2:19924188-19924207 | MS.gene90227:CDS | 45.0% | |
TCATTTCACCACTGGATCAC+CGG | + | chr4.2:19920021-19920040 | MS.gene90227:CDS | 45.0% | |
TGTGTGTGTGATGTGTGTGT+TGG | + | chr4.2:19919789-19919808 | MS.gene90227:intron | 45.0% | |
TTGTACCAAAGGTCTTGAGC+CGG | - | chr4.2:19923130-19923149 | None:intergenic | 45.0% | |
! | AGCTAATGAGGTTCTAACCG+AGG | + | chr4.2:19919024-19919043 | MS.gene90227:intron | 45.0% |
! | ATGACTCTTTTGAGCAGACG+TGG | + | chr4.2:19923175-19923194 | MS.gene90227:CDS | 45.0% |
! | ATGGTGTTGAATGGGGTTGT+GGG | + | chr4.2:19920896-19920915 | MS.gene90227:intron | 45.0% |
! | GACATGAGTCAGTTGGTACT+AGG | - | chr4.2:19922761-19922780 | None:intergenic | 45.0% |
! | TAACGAAGAGTATGAGGAGG+AGG | + | chr4.2:19918667-19918686 | MS.gene90227:CDS | 45.0% |
! | TAGGAATGGATTTGGGATCC+CGG | + | chr4.2:19921185-19921204 | MS.gene90227:CDS | 45.0% |
! | TATGGTGTTGAATGGGGTTG+TGG | + | chr4.2:19920895-19920914 | MS.gene90227:intron | 45.0% |
! | TCTTCTTTTAGCCCGACATC+AGG | + | chr4.2:19921667-19921686 | MS.gene90227:CDS | 45.0% |
! | TGAGTCAGTTGGTACTAGGT+TGG | - | chr4.2:19922757-19922776 | None:intergenic | 45.0% |
!! | AGGTTTCATGGTGGGTTTCA+CGG | - | chr4.2:19920698-19920717 | None:intergenic | 45.0% |
!! | ATTTTTGGAAGGGCTCCCTT+TGG | + | chr4.2:19919118-19919137 | MS.gene90227:CDS | 45.0% |
!! | GTTCTCTGGTTGATGGATCA+AGG | - | chr4.2:19922231-19922250 | None:intergenic | 45.0% |
!! | GTTTCTAGCTTCACCGATGT+GGG | - | chr4.2:19918928-19918947 | None:intergenic | 45.0% |
!! | TGGCACTTTGGTGCCATTAA+TGG | + | chr4.2:19919728-19919747 | MS.gene90227:intron | 45.0% |
!! | TGTTTCTAGCTTCACCGATG+TGG | - | chr4.2:19918929-19918948 | None:intergenic | 45.0% |
!! | TTTTTGGAAGGGCTCCCTTT+GGG | + | chr4.2:19919119-19919138 | MS.gene90227:CDS | 45.0% |
!!! | CAGTTTTTGGTTGTGGGTTG+TGG | + | chr4.2:19921251-19921270 | MS.gene90227:intron | 45.0% |
!!! | CTGTTTTGGTGAAGTACAGC+TGG | + | chr4.2:19922981-19923000 | MS.gene90227:intron | 45.0% |
!! | AAAAAAAAAATATTTATAGA+AGG | - | chr4.2:19919436-19919455 | None:intergenic | 5.0% |
!! | AAAATAAATAAATAAGAAAA+TGG | - | chr4.2:19920848-19920867 | None:intergenic | 5.0% |
!!! | AAATCAAAAATATATTTTAT+AGG | + | chr4.2:19919607-19919626 | MS.gene90227:intron | 5.0% |
!!! | TTATTTTTTTACAAAAATTT+TGG | - | chr4.2:19919522-19919541 | None:intergenic | 5.0% |
AGAGTCATGGTTACCACAGG+TGG | - | chr4.2:19923163-19923182 | None:intergenic | 50.0% | |
AGTCAGCATCTTTGCGCTTG+GGG | + | chr4.2:19918992-19919011 | MS.gene90227:intron | 50.0% | |
AGTGAAGGGTTGAGCATGGA+TGG | + | chr4.2:19923857-19923876 | MS.gene90227:intron | 50.0% | |
ATCCAGTGGTGAAATGACGG+TGG | - | chr4.2:19920018-19920037 | None:intergenic | 50.0% | |
ATGAAGGGAGTTTCAGGGAC+CGG | + | chr4.2:19923108-19923127 | MS.gene90227:CDS | 50.0% | |
ATTCTCTAGTCAGCTCCCTC+TGG | + | chr4.2:19919959-19919978 | MS.gene90227:intron | 50.0% | |
CACACACTTGAGGCAATGTG+TGG | - | chr4.2:19919775-19919794 | None:intergenic | 50.0% | |
CCAGGAACGGATCTGTTTGT+GGG | + | chr4.2:19923207-19923226 | MS.gene90227:CDS | 50.0% | |
CTGCGCTAAGGAAAAAGGCT+CGG | + | chr4.2:19923046-19923065 | MS.gene90227:CDS | 50.0% | |
CTGCTCAACCTTCTCCCTAA+TGG | + | chr4.2:19922410-19922429 | MS.gene90227:intron | 50.0% | |
GAGTCAGCATCTTTGCGCTT+GGG | + | chr4.2:19918991-19919010 | MS.gene90227:intron | 50.0% | |
GATTCAACGTGGTTGTGGTG+AGG | + | chr4.2:19923676-19923695 | MS.gene90227:intron | 50.0% | |
GGAGGAAAAGTAGAAGCTGC+AGG | + | chr4.2:19920268-19920287 | MS.gene90227:CDS | 50.0% | |
GGCACCATGCCATTAGATCA+GGG | + | chr4.2:19919749-19919768 | MS.gene90227:intron | 50.0% | |
GGCACCGTGCAATTAAATCC+TGG | - | chr4.2:19919828-19919847 | None:intergenic | 50.0% | |
GGTTCTATGAGACCTAGGGT+GGG | - | chr4.2:19922436-19922455 | None:intergenic | 50.0% | |
GGTTTCACGGTGAGAGTGAA+AGG | - | chr4.2:19920685-19920704 | None:intergenic | 50.0% | |
GTATGGCCTTCAACTTGGCT+GGG | + | chr4.2:19921888-19921907 | MS.gene90227:intron | 50.0% | |
GTCTGAGTACCAGCAATACC+AGG | + | chr4.2:19918629-19918648 | MS.gene90227:CDS | 50.0% | |
GTGGACGATGTTTCCAGGAA+CGG | + | chr4.2:19923194-19923213 | MS.gene90227:CDS | 50.0% | |
TCCAGGAACGGATCTGTTTG+TGG | + | chr4.2:19923206-19923225 | MS.gene90227:CDS | 50.0% | |
TGCCCAAGTTCTCTGGTTGA+TGG | - | chr4.2:19922238-19922257 | None:intergenic | 50.0% | |
TGGCACCATGCCATTAGATC+AGG | + | chr4.2:19919748-19919767 | MS.gene90227:intron | 50.0% | |
TGTATGGCCTTCAACTTGGC+TGG | + | chr4.2:19921887-19921906 | MS.gene90227:intron | 50.0% | |
TTCTCTAGTCAGCTCCCTCT+GGG | + | chr4.2:19919960-19919979 | MS.gene90227:intron | 50.0% | |
! | GCAGAGGAGATTGGTGTTTG+AGG | + | chr4.2:19918689-19918708 | MS.gene90227:CDS | 50.0% |
! | TGTGTGTTGGGTGCCATCAA+TGG | + | chr4.2:19919802-19919821 | MS.gene90227:intron | 50.0% |
! | TTGGGATCCCGGTTTGTGTT+TGG | + | chr4.2:19921196-19921215 | MS.gene90227:intron | 50.0% |
!! | GAGAAGCACTTACTGCGCTA+AGG | + | chr4.2:19923034-19923053 | MS.gene90227:CDS | 50.0% |
!! | TGGTAGCCTAGAGGTGTTGT+TGG | + | chr4.2:19921369-19921388 | MS.gene90227:intron | 50.0% |
!! | TTTTGGAAGGGCTCCCTTTG+GGG | + | chr4.2:19919120-19919139 | MS.gene90227:CDS | 50.0% |
AACCAGCAATAGACGCGCCT+CGG | - | chr4.2:19919044-19919063 | None:intergenic | 55.0% | |
ACACAGAGGCTGCACAGTCA+AGG | - | chr4.2:19921489-19921508 | None:intergenic | 55.0% | |
AGACCTAGGGTGGGCCATTA+GGG | - | chr4.2:19922427-19922446 | None:intergenic | 55.0% | |
AGAGTATGAGGAGGAGGCAG+AGG | + | chr4.2:19918673-19918692 | MS.gene90227:CDS | 55.0% | |
CAGACGTGGACGATGTTTCC+AGG | + | chr4.2:19923189-19923208 | MS.gene90227:CDS | 55.0% | |
CCAAACCCCCTCTTAGGTCT+TGG | + | chr4.2:19919075-19919094 | MS.gene90227:intron | 55.0% | |
CCAAGACCTAAGAGGGGGTT+TGG | - | chr4.2:19919078-19919097 | None:intergenic | 55.0% | |
CCCACAAACAGATCCGTTCC+TGG | - | chr4.2:19923210-19923229 | None:intergenic | 55.0% | |
GACCACCGTCATTTCACCAC+TGG | + | chr4.2:19920013-19920032 | MS.gene90227:CDS | 55.0% | |
GGAGTCAGCATCTTTGCGCT+TGG | + | chr4.2:19918990-19919009 | MS.gene90227:intron | 55.0% | |
GGGCAATGACGCAGCTAATG+AGG | + | chr4.2:19919012-19919031 | MS.gene90227:intron | 55.0% | |
GGGTTCTATGAGACCTAGGG+TGG | - | chr4.2:19922437-19922456 | None:intergenic | 55.0% | |
GTGGCCCTGATCTAATGGCA+TGG | - | chr4.2:19919756-19919775 | None:intergenic | 55.0% | |
GTGGTGAAATGACGGTGGTC+CGG | - | chr4.2:19920013-19920032 | None:intergenic | 55.0% | |
GTGTAGCTGCCCAAGTTCTC+TGG | - | chr4.2:19922245-19922264 | None:intergenic | 55.0% | |
TCTTCTCACCGAACCACCAC+CGG | + | chr4.2:19919991-19920010 | MS.gene90227:CDS | 55.0% | |
! | CAAGAGGTGTGTACCACCTG+TGG | + | chr4.2:19923147-19923166 | MS.gene90227:CDS | 55.0% |
! | TTTGGTAGCCGGTGATCCAG+TGG | - | chr4.2:19920032-19920051 | None:intergenic | 55.0% |
!! | CTCGCCGACTTGATAAGTCC+AGG | + | chr4.2:19924270-19924289 | MS.gene90227:CDS | 55.0% |
!! | GTGGTGGTTCGGTGAGAAGA+GGG | - | chr4.2:19919991-19920010 | None:intergenic | 55.0% |
AAATGACGGTGGTCCGGTGG+TGG | - | chr4.2:19920007-19920026 | None:intergenic | 60.0% | |
AACCGAGGCGCGTCTATTGC+TGG | + | chr4.2:19919039-19919058 | MS.gene90227:intron | 60.0% | |
AGGGTGGGCCATTAGGGAGA+AGG | - | chr4.2:19922421-19922440 | None:intergenic | 60.0% | |
GAGACCTAGGGTGGGCCATT+AGG | - | chr4.2:19922428-19922447 | None:intergenic | 60.0% | |
GAGGAGGAGGCAGAGGAGAT+TGG | + | chr4.2:19918680-19918699 | MS.gene90227:CDS | 60.0% | |
GTGAAATGACGGTGGTCCGG+TGG | - | chr4.2:19920010-19920029 | None:intergenic | 60.0% | |
TCTCCCTAATGGCCCACCCT+AGG | + | chr4.2:19922421-19922440 | MS.gene90227:intron | 60.0% | |
! | AGGGACCGGCTCAAGACCTT+TGG | + | chr4.2:19923122-19923141 | MS.gene90227:CDS | 60.0% |
! | GTTGGGTGCCATCAATGGCC+AGG | + | chr4.2:19919807-19919826 | MS.gene90227:intron | 60.0% |
!! | GGTGGTGGTTCGGTGAGAAG+AGG | - | chr4.2:19919992-19920011 | None:intergenic | 60.0% |
!! | GTGGTTCGGTGAGAAGAGGG+AGG | - | chr4.2:19919988-19920007 | None:intergenic | 60.0% |
! | ACGGTGGTCCGGTGGTGGTT+CGG | - | chr4.2:19920002-19920021 | None:intergenic | 65.0% |
!! | AGAAGAGGGAGGCGCCCAGA+GGG | - | chr4.2:19919977-19919996 | None:intergenic | 65.0% |
!! | GAGAAGAGGGAGGCGCCCAG+AGG | - | chr4.2:19919978-19919997 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.2 | gene | 19918615 | 19924335 | 19918615 | ID=MS.gene90227 |
chr4.2 | mRNA | 19918615 | 19924335 | 19918615 | ID=MS.gene90227.t1;Parent=MS.gene90227 |
chr4.2 | exon | 19918615 | 19918718 | 19918615 | ID=MS.gene90227.t1.exon1;Parent=MS.gene90227.t1 |
chr4.2 | CDS | 19918615 | 19918718 | 19918615 | ID=cds.MS.gene90227.t1;Parent=MS.gene90227.t1 |
chr4.2 | exon | 19919091 | 19919141 | 19919091 | ID=MS.gene90227.t1.exon2;Parent=MS.gene90227.t1 |
chr4.2 | CDS | 19919091 | 19919141 | 19919091 | ID=cds.MS.gene90227.t1;Parent=MS.gene90227.t1 |
chr4.2 | exon | 19919968 | 19920081 | 19919968 | ID=MS.gene90227.t1.exon3;Parent=MS.gene90227.t1 |
chr4.2 | CDS | 19919968 | 19920081 | 19919968 | ID=cds.MS.gene90227.t1;Parent=MS.gene90227.t1 |
chr4.2 | exon | 19920228 | 19920318 | 19920228 | ID=MS.gene90227.t1.exon4;Parent=MS.gene90227.t1 |
chr4.2 | CDS | 19920228 | 19920318 | 19920228 | ID=cds.MS.gene90227.t1;Parent=MS.gene90227.t1 |
chr4.2 | exon | 19921151 | 19921206 | 19921151 | ID=MS.gene90227.t1.exon5;Parent=MS.gene90227.t1 |
chr4.2 | CDS | 19921151 | 19921206 | 19921151 | ID=cds.MS.gene90227.t1;Parent=MS.gene90227.t1 |
chr4.2 | exon | 19921291 | 19921330 | 19921291 | ID=MS.gene90227.t1.exon6;Parent=MS.gene90227.t1 |
chr4.2 | CDS | 19921291 | 19921330 | 19921291 | ID=cds.MS.gene90227.t1;Parent=MS.gene90227.t1 |
chr4.2 | exon | 19921452 | 19921504 | 19921452 | ID=MS.gene90227.t1.exon7;Parent=MS.gene90227.t1 |
chr4.2 | CDS | 19921452 | 19921504 | 19921452 | ID=cds.MS.gene90227.t1;Parent=MS.gene90227.t1 |
chr4.2 | exon | 19921586 | 19921688 | 19921586 | ID=MS.gene90227.t1.exon8;Parent=MS.gene90227.t1 |
chr4.2 | CDS | 19921586 | 19921688 | 19921586 | ID=cds.MS.gene90227.t1;Parent=MS.gene90227.t1 |
chr4.2 | exon | 19923000 | 19923267 | 19923000 | ID=MS.gene90227.t1.exon9;Parent=MS.gene90227.t1 |
chr4.2 | CDS | 19923000 | 19923267 | 19923000 | ID=cds.MS.gene90227.t1;Parent=MS.gene90227.t1 |
chr4.2 | exon | 19924187 | 19924335 | 19924187 | ID=MS.gene90227.t1.exon10;Parent=MS.gene90227.t1 |
chr4.2 | CDS | 19924187 | 19924335 | 19924187 | ID=cds.MS.gene90227.t1;Parent=MS.gene90227.t1 |
Gene Sequence |
Protein sequence |