Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91223.t1 | XP_003615981.1 | 94.8 | 324 | 15 | 1 | 1 | 324 | 1 | 322 | 3.00E-175 | 624.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91223.t1 | P22195 | 58.5 | 311 | 123 | 4 | 14 | 323 | 11 | 316 | 6.9e-96 | 352.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91223.t1 | G7KFK8 | 94.8 | 324 | 15 | 1 | 1 | 324 | 1 | 322 | 2.1e-175 | 624.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04926 | MS.gene91223 | 0.832256 | 1.05E-55 | -1.69E-46 |
| MS.gene049549 | MS.gene91223 | 0.811136 | 8.14E-51 | -1.69E-46 |
| MS.gene050095 | MS.gene91223 | 0.805927 | 1.05E-49 | -1.69E-46 |
| MS.gene050720 | MS.gene91223 | 0.814541 | 1.46E-51 | -1.69E-46 |
| MS.gene050725 | MS.gene91223 | 0.803075 | 4.14E-49 | -1.69E-46 |
| MS.gene05240 | MS.gene91223 | 0.809883 | 1.52E-50 | -1.69E-46 |
| MS.gene053406 | MS.gene91223 | 0.833868 | 4.16E-56 | -1.69E-46 |
| MS.gene054146 | MS.gene91223 | 0.808753 | 2.65E-50 | -1.69E-46 |
| MS.gene054277 | MS.gene91223 | 0.830094 | 3.56E-55 | -1.69E-46 |
| MS.gene054742 | MS.gene91223 | 0.814038 | 1.89E-51 | -1.69E-46 |
| MS.gene055240 | MS.gene91223 | 0.805098 | 1.57E-49 | -1.69E-46 |
| MS.gene056076 | MS.gene91223 | 0.813674 | 2.27E-51 | -1.69E-46 |
| MS.gene059265 | MS.gene91223 | 0.816765 | 4.67E-52 | -1.69E-46 |
| MS.gene059891 | MS.gene91223 | 0.805925 | 1.05E-49 | -1.69E-46 |
| MS.gene061092 | MS.gene91223 | 0.81643 | 5.55E-52 | -1.69E-46 |
| MS.gene061094 | MS.gene91223 | 0.813902 | 2.02E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91223.t1 | MTR_5g074760 | 94.753 | 324 | 15 | 1 | 1 | 324 | 1 | 322 | 0.0 | 631 |
| MS.gene91223.t1 | MTR_5g074740 | 93.231 | 325 | 20 | 1 | 1 | 325 | 1 | 323 | 0.0 | 624 |
| MS.gene91223.t1 | MTR_5g074710 | 86.769 | 325 | 41 | 1 | 1 | 325 | 1 | 323 | 0.0 | 590 |
| MS.gene91223.t1 | MTR_5g074860 | 71.924 | 317 | 89 | 0 | 6 | 322 | 8 | 324 | 9.60e-174 | 484 |
| MS.gene91223.t1 | MTR_3g467600 | 65.615 | 317 | 106 | 2 | 8 | 323 | 10 | 324 | 4.12e-147 | 417 |
| MS.gene91223.t1 | MTR_5g074700 | 86.726 | 226 | 16 | 1 | 100 | 325 | 5 | 216 | 1.69e-141 | 399 |
| MS.gene91223.t1 | MTR_5g074860 | 62.145 | 317 | 81 | 1 | 6 | 322 | 8 | 285 | 5.70e-141 | 400 |
| MS.gene91223.t1 | MTR_4g029170 | 59.077 | 325 | 127 | 4 | 1 | 323 | 1 | 321 | 1.43e-129 | 372 |
| MS.gene91223.t1 | MTR_4g029180 | 62.838 | 296 | 104 | 4 | 30 | 323 | 30 | 321 | 6.94e-125 | 360 |
| MS.gene91223.t1 | MTR_3g466200 | 55.000 | 320 | 133 | 8 | 8 | 323 | 8 | 320 | 7.04e-120 | 348 |
| MS.gene91223.t1 | MTR_5g074970 | 55.280 | 322 | 130 | 8 | 7 | 323 | 14 | 326 | 9.84e-120 | 348 |
| MS.gene91223.t1 | MTR_3g072190 | 55.172 | 319 | 135 | 5 | 8 | 323 | 5 | 318 | 3.07e-117 | 341 |
| MS.gene91223.t1 | MTR_5g083860 | 55.172 | 319 | 131 | 6 | 12 | 323 | 12 | 325 | 1.79e-115 | 337 |
| MS.gene91223.t1 | MTR_2g084080 | 54.747 | 316 | 137 | 6 | 9 | 323 | 7 | 317 | 1.17e-114 | 334 |
| MS.gene91223.t1 | MTR_3g094650 | 55.096 | 314 | 133 | 5 | 13 | 323 | 14 | 322 | 2.14e-114 | 334 |
| MS.gene91223.t1 | MTR_2g084020 | 54.012 | 324 | 142 | 6 | 1 | 323 | 1 | 318 | 2.72e-114 | 333 |
| MS.gene91223.t1 | MTR_4g029200 | 55.229 | 306 | 131 | 5 | 19 | 323 | 38 | 338 | 3.32e-114 | 334 |
| MS.gene91223.t1 | MTR_2g084010 | 53.704 | 324 | 143 | 5 | 1 | 323 | 1 | 318 | 6.36e-114 | 333 |
| MS.gene91223.t1 | MTR_2g084110 | 55.663 | 309 | 131 | 6 | 16 | 323 | 14 | 317 | 8.06e-112 | 327 |
| MS.gene91223.t1 | MTR_2g084000 | 52.500 | 320 | 143 | 6 | 9 | 323 | 4 | 319 | 5.44e-111 | 325 |
| MS.gene91223.t1 | MTR_2g084090 | 54.516 | 310 | 134 | 6 | 16 | 323 | 14 | 318 | 1.73e-110 | 324 |
| MS.gene91223.t1 | MTR_1g115900 | 54.605 | 304 | 130 | 6 | 23 | 323 | 23 | 321 | 2.09e-110 | 324 |
| MS.gene91223.t1 | MTR_3g094670 | 54.403 | 318 | 137 | 5 | 9 | 323 | 10 | 322 | 4.87e-109 | 320 |
| MS.gene91223.t1 | MTR_7g072510 | 51.582 | 316 | 144 | 5 | 9 | 323 | 5 | 312 | 1.85e-108 | 318 |
| MS.gene91223.t1 | MTR_3g094630 | 54.717 | 318 | 136 | 5 | 9 | 323 | 10 | 322 | 4.26e-108 | 318 |
| MS.gene91223.t1 | MTR_7g072480 | 53.651 | 315 | 139 | 5 | 10 | 323 | 8 | 316 | 1.14e-107 | 317 |
| MS.gene91223.t1 | MTR_4g083710 | 49.688 | 320 | 152 | 6 | 9 | 323 | 9 | 324 | 7.76e-105 | 310 |
| MS.gene91223.t1 | MTR_3g466180 | 53.165 | 316 | 142 | 4 | 9 | 323 | 13 | 323 | 2.23e-104 | 308 |
| MS.gene91223.t1 | MTR_4g029190 | 52.145 | 303 | 136 | 6 | 25 | 323 | 43 | 340 | 3.06e-104 | 309 |
| MS.gene91223.t1 | MTR_7g026990 | 49.530 | 319 | 154 | 7 | 6 | 323 | 10 | 322 | 5.99e-103 | 305 |
| MS.gene91223.t1 | MTR_5g021060 | 51.803 | 305 | 135 | 5 | 27 | 323 | 30 | 330 | 1.22e-101 | 302 |
| MS.gene91223.t1 | MTR_8g076820 | 50.820 | 305 | 138 | 5 | 27 | 323 | 30 | 330 | 6.80e-99 | 295 |
| MS.gene91223.t1 | MTR_4g074995 | 48.580 | 317 | 141 | 7 | 12 | 323 | 9 | 308 | 1.69e-97 | 290 |
| MS.gene91223.t1 | MTR_2g029560 | 46.224 | 331 | 164 | 6 | 1 | 323 | 1 | 325 | 3.37e-95 | 286 |
| MS.gene91223.t1 | MTR_7g093370 | 45.846 | 325 | 164 | 5 | 8 | 323 | 50 | 371 | 4.81e-95 | 286 |
| MS.gene91223.t1 | MTR_3g072190 | 56.471 | 255 | 105 | 4 | 70 | 323 | 2 | 251 | 2.90e-94 | 280 |
| MS.gene91223.t1 | MTR_2g028980 | 47.077 | 325 | 161 | 5 | 8 | 324 | 10 | 331 | 4.82e-94 | 283 |
| MS.gene91223.t1 | MTR_4g125940 | 48.494 | 332 | 153 | 8 | 4 | 324 | 6 | 330 | 6.27e-94 | 282 |
| MS.gene91223.t1 | MTR_1g022970 | 47.213 | 305 | 150 | 4 | 27 | 323 | 46 | 347 | 1.24e-91 | 277 |
| MS.gene91223.t1 | MTR_5g017850 | 48.494 | 332 | 156 | 9 | 1 | 323 | 1 | 326 | 1.36e-91 | 276 |
| MS.gene91223.t1 | MTR_2g040000 | 47.950 | 317 | 149 | 7 | 18 | 323 | 20 | 331 | 1.80e-91 | 276 |
| MS.gene91223.t1 | MTR_1g054205 | 45.541 | 314 | 159 | 5 | 19 | 323 | 16 | 326 | 2.73e-91 | 275 |
| MS.gene91223.t1 | MTR_2g029800 | 48.534 | 307 | 147 | 5 | 25 | 323 | 27 | 330 | 9.44e-91 | 275 |
| MS.gene91223.t1 | MTR_5g017860 | 46.988 | 332 | 161 | 9 | 1 | 323 | 1 | 326 | 1.46e-89 | 271 |
| MS.gene91223.t1 | MTR_2g029830 | 46.906 | 307 | 152 | 5 | 25 | 323 | 26 | 329 | 2.21e-89 | 271 |
| MS.gene91223.t1 | MTR_4g074990 | 45.820 | 323 | 148 | 7 | 8 | 323 | 3 | 305 | 2.90e-89 | 269 |
| MS.gene91223.t1 | MTR_2g029730 | 46.349 | 315 | 158 | 5 | 17 | 323 | 15 | 326 | 1.35e-88 | 269 |
| MS.gene91223.t1 | MTR_4g122640 | 46.906 | 307 | 153 | 6 | 23 | 323 | 34 | 336 | 1.50e-88 | 269 |
| MS.gene91223.t1 | MTR_2g029815 | 44.308 | 325 | 167 | 5 | 7 | 323 | 12 | 330 | 1.80e-88 | 269 |
| MS.gene91223.t1 | MTR_2g029860 | 44.037 | 327 | 164 | 6 | 7 | 323 | 13 | 330 | 1.76e-87 | 266 |
| MS.gene91223.t1 | MTR_2g029820 | 45.928 | 307 | 155 | 4 | 25 | 323 | 27 | 330 | 7.01e-87 | 265 |
| MS.gene91223.t1 | MTR_4g125940 | 52.330 | 279 | 118 | 6 | 56 | 324 | 2 | 275 | 2.20e-86 | 261 |
| MS.gene91223.t1 | MTR_2g029740 | 44.172 | 326 | 167 | 5 | 7 | 324 | 13 | 331 | 3.97e-86 | 263 |
| MS.gene91223.t1 | MTR_4g030890 | 46.732 | 306 | 149 | 5 | 25 | 323 | 98 | 396 | 4.19e-86 | 265 |
| MS.gene91223.t1 | MTR_4g031140 | 43.731 | 327 | 170 | 5 | 4 | 323 | 5 | 324 | 1.51e-85 | 261 |
| MS.gene91223.t1 | MTR_5g014100 | 47.419 | 310 | 146 | 6 | 27 | 323 | 26 | 331 | 6.15e-85 | 259 |
| MS.gene91223.t1 | MTR_5g049280 | 46.602 | 309 | 151 | 8 | 26 | 323 | 32 | 337 | 7.33e-85 | 259 |
| MS.gene91223.t1 | MTR_2g029750 | 44.785 | 326 | 165 | 6 | 7 | 324 | 13 | 331 | 4.74e-84 | 258 |
| MS.gene91223.t1 | MTR_4g074980 | 46.333 | 300 | 132 | 7 | 25 | 323 | 23 | 294 | 7.39e-84 | 255 |
| MS.gene91223.t1 | MTR_2g029910 | 45.981 | 311 | 154 | 6 | 25 | 325 | 28 | 334 | 9.60e-84 | 257 |
| MS.gene91223.t1 | MTR_1g077000 | 44.966 | 298 | 154 | 7 | 27 | 323 | 39 | 327 | 2.89e-81 | 249 |
| MS.gene91223.t1 | MTR_1g101830 | 44.136 | 324 | 162 | 11 | 8 | 323 | 10 | 322 | 3.99e-81 | 249 |
| MS.gene91223.t1 | MTR_2g029850 | 44.951 | 307 | 158 | 5 | 25 | 323 | 27 | 330 | 4.92e-81 | 250 |
| MS.gene91223.t1 | MTR_3g092990 | 41.265 | 332 | 180 | 7 | 1 | 323 | 1 | 326 | 2.25e-79 | 245 |
| MS.gene91223.t1 | MTR_1g038680 | 43.092 | 304 | 158 | 7 | 31 | 323 | 33 | 332 | 9.87e-77 | 238 |
| MS.gene91223.t1 | MTR_1g086490 | 41.018 | 334 | 176 | 6 | 9 | 325 | 13 | 342 | 1.04e-75 | 236 |
| MS.gene91223.t1 | MTR_1g086320 | 40.923 | 325 | 178 | 6 | 9 | 323 | 13 | 333 | 1.17e-75 | 236 |
| MS.gene91223.t1 | MTR_4g046713 | 40.663 | 332 | 182 | 8 | 1 | 323 | 1 | 326 | 3.64e-74 | 231 |
| MS.gene91223.t1 | MTR_2g088770 | 41.617 | 334 | 175 | 11 | 1 | 323 | 1 | 325 | 5.98e-74 | 231 |
| MS.gene91223.t1 | MTR_0155s0040 | 41.667 | 300 | 165 | 8 | 25 | 323 | 25 | 315 | 1.83e-73 | 229 |
| MS.gene91223.t1 | MTR_4g074980 | 48.221 | 253 | 118 | 7 | 9 | 253 | 6 | 253 | 2.42e-73 | 227 |
| MS.gene91223.t1 | MTR_2g029830 | 47.490 | 259 | 125 | 5 | 73 | 323 | 6 | 261 | 5.87e-71 | 222 |
| MS.gene91223.t1 | MTR_3g092990 | 39.157 | 332 | 176 | 8 | 1 | 323 | 1 | 315 | 7.46e-68 | 215 |
| MS.gene91223.t1 | MTR_1g025980 | 40.252 | 318 | 173 | 9 | 9 | 318 | 7 | 315 | 2.43e-67 | 214 |
| MS.gene91223.t1 | MTR_5g022870 | 40.123 | 324 | 170 | 9 | 13 | 323 | 4 | 316 | 4.19e-67 | 213 |
| MS.gene91223.t1 | MTR_8g075100 | 40.656 | 305 | 162 | 8 | 27 | 323 | 26 | 319 | 7.84e-67 | 213 |
| MS.gene91223.t1 | MTR_2g008710 | 39.939 | 328 | 174 | 10 | 9 | 323 | 8 | 325 | 6.70e-66 | 210 |
| MS.gene91223.t1 | MTR_6g027440 | 37.500 | 320 | 187 | 6 | 9 | 323 | 3 | 314 | 7.71e-66 | 210 |
| MS.gene91223.t1 | MTR_7g107520 | 39.385 | 325 | 178 | 8 | 8 | 323 | 6 | 320 | 4.74e-65 | 208 |
| MS.gene91223.t1 | MTR_7g029030 | 40.498 | 321 | 178 | 8 | 9 | 323 | 7 | 320 | 1.79e-63 | 204 |
| MS.gene91223.t1 | MTR_4g133800 | 37.500 | 344 | 176 | 12 | 8 | 325 | 5 | 335 | 5.92e-63 | 203 |
| MS.gene91223.t1 | MTR_2g437770 | 41.967 | 305 | 156 | 10 | 27 | 323 | 50 | 341 | 7.05e-62 | 201 |
| MS.gene91223.t1 | MTR_1g009750 | 39.394 | 330 | 173 | 12 | 9 | 323 | 11 | 328 | 1.94e-61 | 199 |
| MS.gene91223.t1 | MTR_8g062780 | 38.154 | 325 | 186 | 6 | 11 | 325 | 7 | 326 | 1.75e-60 | 196 |
| MS.gene91223.t1 | MTR_7g086820 | 38.235 | 306 | 173 | 9 | 25 | 324 | 18 | 313 | 1.14e-59 | 194 |
| MS.gene91223.t1 | MTR_4g114210 | 37.576 | 330 | 180 | 10 | 10 | 323 | 1 | 320 | 1.36e-59 | 194 |
| MS.gene91223.t1 | MTR_5g016010 | 37.462 | 331 | 189 | 8 | 1 | 319 | 1 | 325 | 2.60e-59 | 193 |
| MS.gene91223.t1 | MTR_4g087965 | 38.720 | 328 | 181 | 10 | 5 | 319 | 22 | 342 | 4.33e-59 | 193 |
| MS.gene91223.t1 | MTR_4g127670 | 39.744 | 312 | 163 | 10 | 26 | 323 | 23 | 323 | 2.88e-58 | 191 |
| MS.gene91223.t1 | MTR_1g090760 | 34.954 | 329 | 198 | 7 | 8 | 325 | 9 | 332 | 3.97e-58 | 191 |
| MS.gene91223.t1 | MTR_7g086870 | 37.793 | 299 | 175 | 8 | 27 | 323 | 22 | 311 | 2.68e-57 | 187 |
| MS.gene91223.t1 | MTR_4g095450 | 37.500 | 328 | 188 | 9 | 1 | 319 | 1 | 320 | 7.12e-56 | 184 |
| MS.gene91223.t1 | MTR_2g099175 | 36.538 | 312 | 175 | 9 | 26 | 324 | 35 | 336 | 1.61e-55 | 184 |
| MS.gene91223.t1 | MTR_3g072210 | 51.596 | 188 | 86 | 4 | 138 | 323 | 54 | 238 | 1.67e-55 | 181 |
| MS.gene91223.t1 | MTR_2g078610 | 36.095 | 338 | 170 | 9 | 25 | 322 | 74 | 405 | 2.12e-54 | 183 |
| MS.gene91223.t1 | MTR_2g008160 | 37.975 | 316 | 165 | 9 | 25 | 323 | 22 | 323 | 7.56e-54 | 179 |
| MS.gene91223.t1 | MTR_2g077990 | 36.686 | 338 | 168 | 10 | 25 | 322 | 74 | 405 | 1.26e-53 | 181 |
| MS.gene91223.t1 | MTR_2g067440 | 36.012 | 336 | 170 | 9 | 25 | 322 | 58 | 386 | 1.59e-53 | 180 |
| MS.gene91223.t1 | MTR_0286s0010 | 35.494 | 324 | 191 | 9 | 12 | 323 | 17 | 334 | 5.40e-53 | 177 |
| MS.gene91223.t1 | MTR_6g008075 | 35.494 | 324 | 191 | 9 | 12 | 323 | 17 | 334 | 5.40e-53 | 177 |
| MS.gene91223.t1 | MTR_6g043240 | 37.785 | 307 | 174 | 11 | 22 | 323 | 37 | 331 | 3.04e-52 | 176 |
| MS.gene91223.t1 | MTR_6g043280 | 35.505 | 307 | 184 | 10 | 22 | 323 | 35 | 332 | 7.13e-52 | 174 |
| MS.gene91223.t1 | MTR_4g132490 | 31.803 | 305 | 196 | 5 | 26 | 323 | 28 | 327 | 1.43e-50 | 171 |
| MS.gene91223.t1 | MTR_1g066710 | 35.082 | 305 | 186 | 7 | 25 | 323 | 25 | 323 | 2.52e-50 | 170 |
| MS.gene91223.t1 | MTR_0147s0010 | 34.259 | 324 | 166 | 9 | 27 | 322 | 77 | 381 | 1.48e-49 | 169 |
| MS.gene91223.t1 | MTR_1g009750 | 36.061 | 330 | 167 | 12 | 9 | 323 | 11 | 311 | 2.26e-49 | 167 |
| MS.gene91223.t1 | MTR_2g078280 | 36.615 | 325 | 160 | 10 | 25 | 309 | 74 | 392 | 9.86e-49 | 167 |
| MS.gene91223.t1 | MTR_3g105790 | 35.474 | 327 | 188 | 7 | 11 | 325 | 9 | 324 | 1.43e-48 | 165 |
| MS.gene91223.t1 | MTR_6g043460 | 35.880 | 301 | 183 | 7 | 22 | 319 | 31 | 324 | 3.04e-48 | 165 |
| MS.gene91223.t1 | MTR_1g066380 | 34.314 | 306 | 189 | 7 | 24 | 323 | 24 | 323 | 4.54e-48 | 164 |
| MS.gene91223.t1 | MTR_2g008730 | 42.105 | 247 | 124 | 8 | 89 | 323 | 62 | 301 | 1.98e-47 | 162 |
| MS.gene91223.t1 | MTR_1g066640 | 34.426 | 305 | 188 | 7 | 25 | 323 | 25 | 323 | 7.19e-47 | 161 |
| MS.gene91223.t1 | MTR_5g033470 | 32.258 | 310 | 192 | 8 | 27 | 323 | 73 | 377 | 4.27e-46 | 160 |
| MS.gene91223.t1 | MTR_2g067450 | 36.102 | 313 | 173 | 10 | 25 | 322 | 9 | 309 | 2.45e-45 | 157 |
| MS.gene91223.t1 | MTR_1g066680 | 33.770 | 305 | 189 | 8 | 25 | 323 | 25 | 322 | 1.24e-44 | 155 |
| MS.gene91223.t1 | MTR_7g072490 | 42.041 | 245 | 82 | 7 | 73 | 316 | 2 | 187 | 6.99e-44 | 150 |
| MS.gene91223.t1 | MTR_3g072260 | 65.455 | 110 | 37 | 1 | 26 | 135 | 25 | 133 | 3.37e-43 | 145 |
| MS.gene91223.t1 | MTR_4g132110 | 30.838 | 334 | 213 | 7 | 3 | 324 | 2 | 329 | 6.57e-43 | 151 |
| MS.gene91223.t1 | MTR_2g008160 | 34.839 | 310 | 148 | 9 | 25 | 323 | 22 | 288 | 1.27e-41 | 146 |
| MS.gene91223.t1 | MTR_4g132110 | 30.267 | 337 | 216 | 7 | 3 | 324 | 2 | 334 | 7.41e-41 | 145 |
| MS.gene91223.t1 | MTR_2g008160 | 44.633 | 177 | 91 | 5 | 25 | 201 | 22 | 191 | 7.73e-40 | 139 |
| MS.gene91223.t1 | MTR_5g074770 | 57.143 | 112 | 43 | 2 | 211 | 322 | 2 | 108 | 2.00e-38 | 132 |
| MS.gene91223.t1 | MTR_2g029880 | 40.957 | 188 | 95 | 3 | 145 | 325 | 12 | 190 | 2.89e-37 | 132 |
| MS.gene91223.t1 | MTR_1g066380 | 32.819 | 259 | 162 | 7 | 71 | 323 | 3 | 255 | 3.53e-35 | 129 |
| MS.gene91223.t1 | MTR_3g105790 | 37.190 | 242 | 133 | 6 | 94 | 323 | 12 | 246 | 1.23e-32 | 121 |
| MS.gene91223.t1 | MTR_2g077980 | 29.749 | 279 | 145 | 10 | 89 | 322 | 11 | 283 | 5.22e-23 | 97.1 |
| MS.gene91223.t1 | MTR_3g462850 | 39.007 | 141 | 75 | 5 | 194 | 323 | 9 | 149 | 4.56e-20 | 85.5 |
| MS.gene91223.t1 | MTR_2g078560 | 30.568 | 229 | 116 | 7 | 133 | 322 | 95 | 319 | 4.78e-20 | 89.4 |
| MS.gene91223.t1 | MTR_6g048160 | 56.164 | 73 | 27 | 3 | 66 | 138 | 22 | 89 | 8.14e-19 | 80.5 |
| MS.gene91223.t1 | MTR_5g058120 | 35.669 | 157 | 92 | 3 | 165 | 319 | 6 | 155 | 1.26e-18 | 84.3 |
| MS.gene91223.t1 | MTR_4g031040 | 34.320 | 169 | 72 | 3 | 86 | 254 | 1 | 130 | 1.79e-18 | 80.9 |
| MS.gene91223.t1 | MTR_4g114220 | 48.193 | 83 | 32 | 3 | 53 | 135 | 29 | 100 | 1.33e-17 | 78.6 |
| MS.gene91223.t1 | MTR_3g086710 | 59.322 | 59 | 24 | 0 | 14 | 72 | 6 | 64 | 5.27e-17 | 75.5 |
| MS.gene91223.t1 | MTR_1g089005 | 37.500 | 136 | 75 | 4 | 11 | 140 | 1 | 132 | 1.08e-16 | 76.6 |
| MS.gene91223.t1 | MTR_2g029930 | 41.304 | 92 | 29 | 2 | 25 | 105 | 17 | 94 | 5.69e-15 | 70.1 |
| MS.gene91223.t1 | MTR_7g086790 | 30.688 | 189 | 110 | 7 | 74 | 260 | 17 | 186 | 9.64e-15 | 72.0 |
| MS.gene91223.t1 | MTR_1g098320 | 40.741 | 81 | 46 | 1 | 244 | 324 | 47 | 125 | 9.98e-12 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91223.t1 | AT5G05340 | 55.960 | 302 | 125 | 5 | 25 | 323 | 28 | 324 | 1.42e-115 | 337 |
| MS.gene91223.t1 | AT5G58390 | 54.088 | 318 | 137 | 7 | 10 | 323 | 4 | 316 | 1.19e-105 | 311 |
| MS.gene91223.t1 | AT5G58400 | 50.313 | 320 | 148 | 8 | 8 | 323 | 13 | 325 | 1.14e-102 | 304 |
| MS.gene91223.t1 | AT4G36430 | 50.814 | 307 | 139 | 6 | 25 | 323 | 28 | 330 | 1.38e-101 | 302 |
| MS.gene91223.t1 | AT2G18150 | 49.186 | 307 | 144 | 5 | 25 | 323 | 34 | 336 | 1.83e-101 | 301 |
| MS.gene91223.t1 | AT1G14550 | 50.158 | 317 | 151 | 6 | 10 | 323 | 9 | 321 | 3.60e-101 | 300 |
| MS.gene91223.t1 | AT5G66390 | 50.654 | 306 | 139 | 5 | 27 | 324 | 33 | 334 | 8.08e-100 | 297 |
| MS.gene91223.t1 | AT2G18140 | 49.836 | 305 | 141 | 5 | 27 | 323 | 35 | 335 | 3.02e-98 | 293 |
| MS.gene91223.t1 | AT5G06720 | 44.753 | 324 | 168 | 4 | 8 | 323 | 13 | 333 | 8.20e-95 | 285 |
| MS.gene91223.t1 | AT1G44970 | 48.534 | 307 | 147 | 5 | 25 | 323 | 43 | 346 | 9.88e-95 | 285 |
| MS.gene91223.t1 | AT1G14540 | 49.169 | 301 | 147 | 5 | 25 | 323 | 19 | 315 | 2.33e-94 | 283 |
| MS.gene91223.t1 | AT3G50990 | 46.474 | 312 | 155 | 5 | 21 | 324 | 35 | 342 | 3.27e-92 | 278 |
| MS.gene91223.t1 | AT5G06730 | 43.519 | 324 | 172 | 4 | 8 | 323 | 14 | 334 | 7.03e-92 | 278 |
| MS.gene91223.t1 | AT4G08770 | 48.089 | 314 | 150 | 6 | 20 | 323 | 17 | 327 | 4.67e-91 | 275 |
| MS.gene91223.t1 | AT2G38390 | 48.377 | 308 | 147 | 5 | 25 | 323 | 29 | 333 | 1.13e-89 | 272 |
| MS.gene91223.t1 | AT2G38380 | 48.377 | 308 | 147 | 5 | 25 | 323 | 29 | 333 | 3.53e-88 | 268 |
| MS.gene91223.t1 | AT1G49570 | 48.693 | 306 | 141 | 8 | 25 | 319 | 46 | 346 | 9.65e-88 | 267 |
| MS.gene91223.t1 | AT5G19890 | 45.706 | 326 | 158 | 8 | 8 | 323 | 11 | 327 | 1.10e-87 | 266 |
| MS.gene91223.t1 | AT4G08780 | 46.815 | 314 | 154 | 6 | 20 | 323 | 17 | 327 | 1.48e-87 | 266 |
| MS.gene91223.t1 | AT3G49120 | 45.062 | 324 | 162 | 7 | 13 | 323 | 15 | 335 | 3.67e-86 | 263 |
| MS.gene91223.t1 | AT3G32980 | 46.278 | 309 | 153 | 6 | 25 | 323 | 29 | 334 | 5.46e-85 | 260 |
| MS.gene91223.t1 | AT3G49110 | 45.955 | 309 | 154 | 6 | 25 | 323 | 31 | 336 | 3.74e-84 | 258 |
| MS.gene91223.t1 | AT4G16270 | 46.512 | 301 | 145 | 7 | 32 | 323 | 55 | 348 | 5.08e-84 | 258 |
| MS.gene91223.t1 | AT2G35380 | 45.427 | 328 | 161 | 7 | 9 | 323 | 13 | 335 | 7.16e-83 | 254 |
| MS.gene91223.t1 | AT1G68850 | 44.337 | 309 | 157 | 8 | 27 | 323 | 30 | 335 | 1.45e-80 | 248 |
| MS.gene91223.t1 | AT1G71695 | 44.300 | 307 | 162 | 6 | 21 | 323 | 38 | 339 | 2.93e-80 | 248 |
| MS.gene91223.t1 | AT5G19880 | 43.865 | 326 | 167 | 6 | 9 | 323 | 9 | 329 | 5.96e-79 | 244 |
| MS.gene91223.t1 | AT5G51890 | 43.692 | 325 | 163 | 11 | 10 | 323 | 7 | 322 | 7.03e-79 | 243 |
| MS.gene91223.t1 | AT2G22420 | 40.498 | 321 | 175 | 6 | 13 | 324 | 7 | 320 | 2.16e-78 | 243 |
| MS.gene91223.t1 | AT3G01190 | 43.750 | 304 | 156 | 7 | 27 | 323 | 26 | 321 | 2.32e-75 | 234 |
| MS.gene91223.t1 | AT5G15180 | 41.718 | 326 | 175 | 8 | 7 | 323 | 10 | 329 | 4.35e-73 | 229 |
| MS.gene91223.t1 | AT4G33420 | 41.325 | 317 | 175 | 8 | 9 | 323 | 18 | 325 | 5.06e-73 | 229 |
| MS.gene91223.t1 | AT5G42180 | 40.491 | 326 | 170 | 9 | 5 | 322 | 7 | 316 | 9.77e-73 | 228 |
| MS.gene91223.t1 | AT4G33420 | 41.325 | 317 | 175 | 8 | 9 | 323 | 65 | 372 | 2.59e-72 | 228 |
| MS.gene91223.t1 | AT4G11290 | 37.461 | 323 | 189 | 6 | 10 | 323 | 8 | 326 | 7.42e-71 | 223 |
| MS.gene91223.t1 | AT5G64120 | 43.000 | 300 | 154 | 8 | 31 | 323 | 39 | 328 | 2.83e-69 | 219 |
| MS.gene91223.t1 | AT1G05240 | 41.333 | 300 | 159 | 7 | 30 | 319 | 29 | 321 | 6.63e-69 | 218 |
| MS.gene91223.t1 | AT1G05250 | 41.333 | 300 | 159 | 7 | 30 | 319 | 29 | 321 | 6.63e-69 | 218 |
| MS.gene91223.t1 | AT1G05260 | 39.172 | 314 | 176 | 8 | 19 | 323 | 18 | 325 | 8.20e-69 | 218 |
| MS.gene91223.t1 | AT3G03670 | 37.615 | 327 | 182 | 9 | 8 | 323 | 6 | 321 | 2.30e-68 | 216 |
| MS.gene91223.t1 | AT3G21770 | 40.645 | 310 | 169 | 8 | 19 | 319 | 21 | 324 | 3.54e-67 | 214 |
| MS.gene91223.t1 | AT5G17820 | 38.339 | 313 | 170 | 9 | 19 | 323 | 16 | 313 | 1.84e-63 | 204 |
| MS.gene91223.t1 | AT2G41480 | 38.182 | 330 | 181 | 9 | 7 | 323 | 9 | 328 | 2.59e-63 | 204 |
| MS.gene91223.t1 | AT5G17820 | 38.339 | 313 | 170 | 9 | 19 | 323 | 69 | 366 | 1.46e-62 | 203 |
| MS.gene91223.t1 | AT1G30870 | 41.558 | 308 | 156 | 11 | 27 | 323 | 51 | 345 | 2.88e-62 | 202 |
| MS.gene91223.t1 | AT5G40150 | 37.662 | 308 | 174 | 7 | 25 | 323 | 30 | 328 | 3.06e-61 | 198 |
| MS.gene91223.t1 | AT5G39580 | 41.196 | 301 | 159 | 10 | 31 | 323 | 29 | 319 | 6.80e-60 | 194 |
| MS.gene91223.t1 | AT3G28200 | 36.808 | 307 | 177 | 7 | 25 | 323 | 19 | 316 | 7.67e-60 | 194 |
| MS.gene91223.t1 | AT5G47000 | 37.117 | 326 | 191 | 8 | 8 | 325 | 13 | 332 | 3.81e-59 | 193 |
| MS.gene91223.t1 | AT4G17690 | 38.535 | 314 | 181 | 7 | 18 | 325 | 17 | 324 | 1.56e-58 | 191 |
| MS.gene91223.t1 | AT4G26010 | 35.849 | 318 | 187 | 11 | 9 | 323 | 6 | 309 | 6.86e-58 | 189 |
| MS.gene91223.t1 | AT4G26010 | 35.849 | 318 | 187 | 11 | 9 | 323 | 34 | 337 | 1.19e-57 | 189 |
| MS.gene91223.t1 | AT2G35380 | 45.600 | 250 | 119 | 6 | 87 | 323 | 2 | 247 | 1.70e-57 | 186 |
| MS.gene91223.t1 | AT1G34510 | 35.826 | 321 | 185 | 10 | 9 | 323 | 4 | 309 | 1.74e-57 | 188 |
| MS.gene91223.t1 | AT5G22410 | 34.056 | 323 | 192 | 9 | 9 | 320 | 10 | 322 | 1.96e-56 | 186 |
| MS.gene91223.t1 | AT4G33870 | 34.125 | 337 | 171 | 9 | 30 | 322 | 71 | 400 | 2.39e-56 | 188 |
| MS.gene91223.t1 | AT4G25980 | 37.580 | 314 | 174 | 10 | 23 | 323 | 22 | 326 | 4.99e-56 | 185 |
| MS.gene91223.t1 | AT2G18980 | 36.228 | 334 | 187 | 11 | 4 | 323 | 2 | 323 | 6.42e-56 | 184 |
| MS.gene91223.t1 | AT5G64100 | 38.284 | 303 | 167 | 10 | 30 | 323 | 40 | 331 | 6.99e-56 | 184 |
| MS.gene91223.t1 | AT4G37530 | 38.486 | 317 | 165 | 9 | 25 | 323 | 25 | 329 | 6.20e-55 | 182 |
| MS.gene91223.t1 | AT4G30170 | 37.500 | 312 | 171 | 11 | 25 | 323 | 25 | 325 | 1.22e-54 | 181 |
| MS.gene91223.t1 | AT5G64110 | 37.538 | 333 | 184 | 11 | 5 | 323 | 8 | 330 | 1.30e-54 | 181 |
| MS.gene91223.t1 | AT1G24110 | 35.000 | 320 | 190 | 8 | 16 | 323 | 9 | 322 | 1.82e-54 | 181 |
| MS.gene91223.t1 | AT5G67400 | 37.764 | 331 | 182 | 11 | 9 | 323 | 7 | 329 | 5.44e-54 | 180 |
| MS.gene91223.t1 | AT2G34060 | 35.503 | 338 | 187 | 11 | 9 | 320 | 11 | 343 | 1.34e-53 | 179 |
| MS.gene91223.t1 | AT2G39040 | 38.801 | 317 | 166 | 10 | 25 | 323 | 44 | 350 | 3.75e-53 | 178 |
| MS.gene91223.t1 | AT5G14130 | 36.111 | 324 | 182 | 10 | 13 | 323 | 19 | 330 | 5.98e-53 | 177 |
| MS.gene91223.t1 | AT1G77100 | 36.025 | 322 | 187 | 9 | 11 | 323 | 8 | 319 | 9.06e-53 | 176 |
| MS.gene91223.t1 | AT5G14130 | 36.111 | 324 | 182 | 10 | 13 | 323 | 60 | 371 | 1.59e-52 | 177 |
| MS.gene91223.t1 | AT2G24800 | 35.897 | 312 | 178 | 7 | 24 | 323 | 28 | 329 | 2.08e-52 | 176 |
| MS.gene91223.t1 | AT4G31760 | 33.636 | 330 | 200 | 7 | 4 | 323 | 6 | 326 | 1.80e-51 | 173 |
| MS.gene91223.t1 | AT5G24070 | 35.077 | 325 | 184 | 11 | 14 | 323 | 23 | 335 | 9.13e-50 | 169 |
| MS.gene91223.t1 | AT3G49960 | 35.030 | 334 | 191 | 11 | 8 | 323 | 4 | 329 | 1.41e-49 | 168 |
| MS.gene91223.t1 | AT2G43480 | 33.851 | 322 | 187 | 10 | 17 | 323 | 25 | 335 | 1.46e-49 | 168 |
| MS.gene91223.t1 | AT4G37520 | 35.556 | 315 | 177 | 8 | 25 | 323 | 25 | 329 | 4.80e-49 | 167 |
| MS.gene91223.t1 | AT4G37520 | 35.238 | 315 | 175 | 9 | 25 | 323 | 25 | 326 | 3.83e-47 | 162 |
| MS.gene91223.t1 | AT4G37530 | 39.015 | 264 | 133 | 8 | 25 | 270 | 25 | 278 | 3.21e-46 | 158 |
| MS.gene91223.t1 | AT2G37130 | 34.667 | 300 | 185 | 7 | 30 | 323 | 2 | 296 | 5.55e-46 | 158 |
| MS.gene91223.t1 | AT2G37130 | 34.426 | 305 | 189 | 7 | 25 | 323 | 28 | 327 | 6.46e-46 | 159 |
| MS.gene91223.t1 | AT3G17070 | 32.573 | 307 | 192 | 6 | 27 | 323 | 38 | 339 | 1.09e-45 | 158 |
| MS.gene91223.t1 | AT4G21960 | 29.940 | 334 | 218 | 7 | 1 | 324 | 1 | 328 | 6.39e-43 | 151 |
| MS.gene91223.t1 | AT4G25980 | 44.134 | 179 | 93 | 5 | 23 | 201 | 67 | 238 | 1.92e-40 | 143 |
| MS.gene91223.t1 | AT5G39580 | 44.828 | 174 | 88 | 6 | 31 | 204 | 29 | 194 | 2.21e-35 | 129 |
| MS.gene91223.t1 | AT2G24800 | 41.860 | 172 | 93 | 3 | 24 | 195 | 28 | 192 | 1.40e-32 | 121 |
| MS.gene91223.t1 | AT3G17070 | 29.749 | 279 | 180 | 7 | 55 | 323 | 4 | 276 | 5.62e-31 | 118 |
| MS.gene91223.t1 | AT4G32320 | 30.939 | 181 | 101 | 8 | 41 | 213 | 99 | 263 | 9.11e-12 | 65.5 |
Find 50 sgRNAs with CRISPR-Local
Find 80 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAATTCTGTCATAATAATT+TGG | 0.093007 | 5.1:+57448103 | None:intergenic |
| ATAGAACAACTAAGTCTTTA+AGG | 0.101127 | 5.1:+57447063 | None:intergenic |
| CCTCTAATTGAATTGTTATT+TGG | 0.117052 | 5.1:+57447676 | None:intergenic |
| CCAAATAACAATTCAATTAG+AGG | 0.210718 | 5.1:-57447676 | MS.gene91223:CDS |
| TTGCAAATTTGCTGCAAAAT+TGG | 0.238319 | 5.1:+57446965 | None:intergenic |
| AAATTCTGTCATAATAATTT+GGG | 0.267383 | 5.1:+57448104 | None:intergenic |
| TATCCTTCTTCATTCATATC+TGG | 0.282510 | 5.1:+57446652 | None:intergenic |
| AAAGACTTAGTTGTTCTATC+TGG | 0.291396 | 5.1:-57447059 | MS.gene91223:CDS |
| GTTTCTAAAGTTAGTGCATT+TGG | 0.291735 | 5.1:+57447016 | None:intergenic |
| GTAACACTTGGTACCAATAT+TGG | 0.304974 | 5.1:+57447198 | None:intergenic |
| TGCAATGGTAGGACTCAAAA+TGG | 0.327673 | 5.1:+57448135 | None:intergenic |
| CTATCTGGTGGTCACACAAT+TGG | 0.351955 | 5.1:-57447044 | MS.gene91223:CDS |
| GATGATACCCCTACTTTCAT+TGG | 0.378775 | 5.1:-57447715 | MS.gene91223:CDS |
| GACATCACCTTTGCAAGCTT+TGG | 0.386204 | 5.1:+57447618 | None:intergenic |
| TTTATGATTGGCAATGCCTT+TGG | 0.399242 | 5.1:+57448079 | None:intergenic |
| GGTAACTTGAAGCCTCTTAC+CGG | 0.399791 | 5.1:-57446714 | MS.gene91223:CDS |
| AGTTGACACAAAATACTATA+AGG | 0.410019 | 5.1:-57446880 | MS.gene91223:CDS |
| AGTTGGGAGGTAACCAATAT+TGG | 0.411115 | 5.1:-57447211 | MS.gene91223:CDS |
| AATGCACTAACTTTAGAAAC+AGG | 0.420538 | 5.1:-57447013 | MS.gene91223:CDS |
| TGGAGTTTCTATGATTAAGA+TGG | 0.424465 | 5.1:-57446736 | MS.gene91223:CDS |
| TATTGGTACCAAGTGTTACT+AGG | 0.448839 | 5.1:-57447194 | MS.gene91223:CDS |
| TTGTCGTCGCTGCCGATTTG+AGG | 0.455567 | 5.1:+57446933 | None:intergenic |
| AGCTGCTATAGCTAAAATAT+CGG | 0.458807 | 5.1:+57447585 | None:intergenic |
| GGAGTTTCTATGATTAAGAT+GGG | 0.461747 | 5.1:-57446735 | MS.gene91223:CDS |
| TGTCGTCGCTGCCGATTTGA+GGG | 0.467747 | 5.1:+57446934 | None:intergenic |
| CTCTTCTTCCTAGTAACACT+TGG | 0.476428 | 5.1:+57447186 | None:intergenic |
| CAAAAGACATGCCCTCAAAT+CGG | 0.485386 | 5.1:-57446945 | MS.gene91223:CDS |
| GAGATTCAAGATTTGCAAGC+AGG | 0.488930 | 5.1:-57447166 | MS.gene91223:CDS |
| TGCAAAATTGGTGTCTATGT+TGG | 0.490826 | 5.1:+57446977 | None:intergenic |
| CTTGAAGGAGTAGAATCAAA+TGG | 0.501343 | 5.1:+57446903 | None:intergenic |
| TCTTCTCACCAATGAAAGTA+GGG | 0.504059 | 5.1:+57447707 | None:intergenic |
| GACTTAGTTGTTCTATCTGG+TGG | 0.509368 | 5.1:-57447056 | MS.gene91223:CDS |
| AATTATTCGCGAGCCACGCA+TGG | 0.522949 | 5.1:-57448038 | MS.gene91223:CDS |
| TGGTTCTCAAAGTGATCAAT+TGG | 0.535200 | 5.1:-57446802 | MS.gene91223:CDS |
| GTCTTCTCACCAATGAAAGT+AGG | 0.540592 | 5.1:+57447706 | None:intergenic |
| AAAGCTCTTGATCAGAATGA+AGG | 0.549289 | 5.1:+57446835 | None:intergenic |
| TTACGTTAACAAAGCAGTCA+TGG | 0.552379 | 5.1:+57447990 | None:intergenic |
| GGGGTCAGCTTTGCAATGGT+AGG | 0.553428 | 5.1:+57448124 | None:intergenic |
| AGATTCAAGATTTGCAAGCA+GGG | 0.563486 | 5.1:-57447165 | MS.gene91223:CDS |
| ATTATTCGCGAGCCACGCAT+GGG | 0.580539 | 5.1:-57448037 | MS.gene91223:CDS |
| ATTTGGGGTCAGCTTTGCAA+TGG | 0.590610 | 5.1:+57448120 | None:intergenic |
| TTCTTCAATCAACAGTTGGG+AGG | 0.601444 | 5.1:-57447224 | MS.gene91223:intron |
| GAACCTACACAGGGTTGTGA+TGG | 0.613617 | 5.1:-57447751 | MS.gene91223:intron |
| AACAACGATGCTCCCATGCG+TGG | 0.622734 | 5.1:+57448025 | None:intergenic |
| TTATGACAGAATTTGTCCAA+AGG | 0.624218 | 5.1:-57448095 | MS.gene91223:CDS |
| ATCACAAATTTCAAGTCACA+TGG | 0.624562 | 5.1:-57447092 | MS.gene91223:CDS |
| AAGGCTTTGTTGTATAAACA+AGG | 0.625131 | 5.1:-57446861 | MS.gene91223:CDS |
| AATTCTGTCATAATAATTTG+GGG | 0.631305 | 5.1:+57448105 | None:intergenic |
| GAAGTTACCAAAGCTTGCAA+AGG | 0.633455 | 5.1:-57447625 | MS.gene91223:CDS |
| CTTCTCACCAATGAAAGTAG+GGG | 0.657463 | 5.1:+57447708 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTCTGTCATAATAATTT+GGG | + | chr5.1:57446751-57446770 | None:intergenic | 15.0% |
| !!! | AGACTATTTTTTTTATATTG+CGG | + | chr5.1:57447379-57447398 | None:intergenic | 15.0% |
| !!! | ATATGAGTTTAATTTAAACA+TGG | + | chr5.1:57447525-57447544 | None:intergenic | 15.0% |
| !!! | TTAACAATTGATTTTATGAT+TGG | + | chr5.1:57446788-57446807 | None:intergenic | 15.0% |
| !! | AATTCTGTCATAATAATTTG+GGG | + | chr5.1:57446750-57446769 | None:intergenic | 20.0% |
| !! | CAAATTCTGTCATAATAATT+TGG | + | chr5.1:57446752-57446771 | None:intergenic | 20.0% |
| !! | TAAAAATCACAACATAACAT+TGG | + | chr5.1:57446682-57446701 | None:intergenic | 20.0% |
| !! | TTGTATTGCAGAAAAATTTA+GGG | + | chr5.1:57447464-57447483 | None:intergenic | 20.0% |
| !!! | TATTTTGCACTTTTTAATCA+TGG | - | chr5.1:57447325-57447344 | MS.gene91223:intron | 20.0% |
| !!! | TGTTAAGTGACTATTTTATA+AGG | + | chr5.1:57446937-57446956 | None:intergenic | 20.0% |
| ! | AACATTGGAAGATTATATTG+CGG | + | chr5.1:57447425-57447444 | None:intergenic | 25.0% |
| ! | AGTTGACACAAAATACTATA+AGG | - | chr5.1:57447972-57447991 | MS.gene91223:intron | 25.0% |
| ! | ATAGAACAACTAAGTCTTTA+AGG | + | chr5.1:57447792-57447811 | None:intergenic | 25.0% |
| ! | ATCGAATATATCACTTACTA+TGG | + | chr5.1:57447306-57447325 | None:intergenic | 25.0% |
| ! | CCAAATAACAATTCAATTAG+AGG | - | chr5.1:57447176-57447195 | MS.gene91223:CDS | 25.0% |
| ! | CTTGTATTGCAGAAAAATTT+AGG | + | chr5.1:57447465-57447484 | None:intergenic | 25.0% |
| !! | ATTTTTCTTCAATCAACAGT+TGG | - | chr5.1:57447624-57447643 | MS.gene91223:CDS | 25.0% |
| !! | CCTCTAATTGAATTGTTATT+TGG | + | chr5.1:57447179-57447198 | None:intergenic | 25.0% |
| !! | TACAGCGTTTTATATAACAT+TGG | + | chr5.1:57447440-57447459 | None:intergenic | 25.0% |
| !! | TATGCTTTTGCTTATGATTT+TGG | - | chr5.1:57448096-57448115 | MS.gene91223:CDS | 25.0% |
| !! | TTTTTCTTCAATCAACAGTT+GGG | - | chr5.1:57447625-57447644 | MS.gene91223:CDS | 25.0% |
| AAAGACTTAGTTGTTCTATC+TGG | - | chr5.1:57447793-57447812 | MS.gene91223:intron | 30.0% | |
| AGCTGCTATAGCTAAAATAT+CGG | + | chr5.1:57447270-57447289 | None:intergenic | 30.0% | |
| GGAGTTTCTATGATTAAGAT+GGG | - | chr5.1:57448117-57448136 | MS.gene91223:CDS | 30.0% | |
| TGGAGTTTCTATGATTAAGA+TGG | - | chr5.1:57448116-57448135 | MS.gene91223:CDS | 30.0% | |
| TTATGACAGAATTTGTCCAA+AGG | - | chr5.1:57446757-57446776 | MS.gene91223:CDS | 30.0% | |
| ! | AATGCACTAACTTTAGAAAC+AGG | - | chr5.1:57447839-57447858 | MS.gene91223:intron | 30.0% |
| ! | ATCACAAATTTCAAGTCACA+TGG | - | chr5.1:57447760-57447779 | MS.gene91223:intron | 30.0% |
| ! | CAATTCAATTAGAGGTTTTG+AGG | - | chr5.1:57447184-57447203 | MS.gene91223:CDS | 30.0% |
| ! | TATTTTGTGTCAACTCTTGA+AGG | + | chr5.1:57447967-57447986 | None:intergenic | 30.0% |
| !! | AAGGCTTTGTTGTATAAACA+AGG | - | chr5.1:57447991-57448010 | MS.gene91223:intron | 30.0% |
| !! | GTTTCTAAAGTTAGTGCATT+TGG | + | chr5.1:57447839-57447858 | None:intergenic | 30.0% |
| !! | TTGCAAATTTGCTGCAAAAT+TGG | + | chr5.1:57447890-57447909 | None:intergenic | 30.0% |
| AAAGCTCTTGATCAGAATGA+AGG | + | chr5.1:57448020-57448039 | None:intergenic | 35.0% | |
| AGATTCAAGATTTGCAAGCA+GGG | - | chr5.1:57447687-57447706 | MS.gene91223:CDS | 35.0% | |
| AGCTGTGAGAAGTTGAAAAA+TGG | + | chr5.1:57447739-57447758 | None:intergenic | 35.0% | |
| CTTGAAGGAGTAGAATCAAA+TGG | + | chr5.1:57447952-57447971 | None:intergenic | 35.0% | |
| GTAACACTTGGTACCAATAT+TGG | + | chr5.1:57447657-57447676 | None:intergenic | 35.0% | |
| TCTTCTCACCAATGAAAGTA+GGG | + | chr5.1:57447148-57447167 | None:intergenic | 35.0% | |
| TGGTTCTCAAAGTGATCAAT+TGG | - | chr5.1:57448050-57448069 | MS.gene91223:CDS | 35.0% | |
| TGTGAGAAGTTGAAAAATGG+AGG | + | chr5.1:57447736-57447755 | None:intergenic | 35.0% | |
| TTACGTTAACAAAGCAGTCA+TGG | + | chr5.1:57446865-57446884 | None:intergenic | 35.0% | |
| TTATATTGCGGTCGCAATTA+GGG | + | chr5.1:57447367-57447386 | None:intergenic | 35.0% | |
| TTTATATTGCGGTCGCAATT+AGG | + | chr5.1:57447368-57447387 | None:intergenic | 35.0% | |
| TTTATGATTGGCAATGCCTT+TGG | + | chr5.1:57446776-57446795 | None:intergenic | 35.0% | |
| ! | TATTGGTACCAAGTGTTACT+AGG | - | chr5.1:57447658-57447677 | MS.gene91223:CDS | 35.0% |
| ! | TCTGATCAAGAGCTTTTCAA+AGG | - | chr5.1:57448024-57448043 | MS.gene91223:CDS | 35.0% |
| ! | TGCAAAATTGGTGTCTATGT+TGG | + | chr5.1:57447878-57447897 | None:intergenic | 35.0% |
| AAGCCTCTTACCGGAAAAAA+GGG | - | chr5.1:57448147-57448166 | MS.gene91223:CDS | 40.0% | |
| AGTTGGGAGGTAACCAATAT+TGG | - | chr5.1:57447641-57447660 | MS.gene91223:CDS | 40.0% | |
| CAAAAGACATGCCCTCAAAT+CGG | - | chr5.1:57447907-57447926 | MS.gene91223:intron | 40.0% | |
| CTCTTCTTCCTAGTAACACT+TGG | + | chr5.1:57447669-57447688 | None:intergenic | 40.0% | |
| CTTCTCACCAATGAAAGTAG+GGG | + | chr5.1:57447147-57447166 | None:intergenic | 40.0% | |
| GAACATTGTGAACCTACACA+GGG | - | chr5.1:57447092-57447111 | MS.gene91223:CDS | 40.0% | |
| GAAGTTACCAAAGCTTGCAA+AGG | - | chr5.1:57447227-57447246 | MS.gene91223:intron | 40.0% | |
| GACTTAGTTGTTCTATCTGG+TGG | - | chr5.1:57447796-57447815 | MS.gene91223:intron | 40.0% | |
| GAGAAGTTGAAAAATGGAGG+TGG | + | chr5.1:57447733-57447752 | None:intergenic | 40.0% | |
| GAGATTCAAGATTTGCAAGC+AGG | - | chr5.1:57447686-57447705 | MS.gene91223:CDS | 40.0% | |
| GATGATACCCCTACTTTCAT+TGG | - | chr5.1:57447137-57447156 | MS.gene91223:CDS | 40.0% | |
| GTCTTCTCACCAATGAAAGT+AGG | + | chr5.1:57447149-57447168 | None:intergenic | 40.0% | |
| TGAACATTGTGAACCTACAC+AGG | - | chr5.1:57447091-57447110 | MS.gene91223:CDS | 40.0% | |
| TGCAATGGTAGGACTCAAAA+TGG | + | chr5.1:57446720-57446739 | None:intergenic | 40.0% | |
| TTCTTCAATCAACAGTTGGG+AGG | - | chr5.1:57447628-57447647 | MS.gene91223:CDS | 40.0% | |
| ! | CAAGAGCTTTTCAAAGGTGA+TGG | - | chr5.1:57448030-57448049 | MS.gene91223:CDS | 40.0% |
| CTATCTGGTGGTCACACAAT+TGG | - | chr5.1:57447808-57447827 | MS.gene91223:intron | 45.0% | |
| GAAGCCTCTTACCGGAAAAA+AGG | - | chr5.1:57448146-57448165 | MS.gene91223:CDS | 45.0% | |
| GACATCACCTTTGCAAGCTT+TGG | + | chr5.1:57447237-57447256 | None:intergenic | 45.0% | |
| GGTAACTTGAAGCCTCTTAC+CGG | - | chr5.1:57448138-57448157 | MS.gene91223:CDS | 45.0% | |
| ! | ATTTGGGGTCAGCTTTGCAA+TGG | + | chr5.1:57446735-57446754 | None:intergenic | 45.0% |
| !!! | CCTGATCTCACCCTTTTTTC+CGG | + | chr5.1:57448160-57448179 | None:intergenic | 45.0% |
| !!! | TCACCCTTTTTTCCGGTAAG+AGG | + | chr5.1:57448153-57448172 | None:intergenic | 45.0% |
| AATTATTCGCGAGCCACGCA+TGG | - | chr5.1:57446814-57446833 | MS.gene91223:CDS | 50.0% | |
| ATTATTCGCGAGCCACGCAT+GGG | - | chr5.1:57446815-57446834 | MS.gene91223:CDS | 50.0% | |
| CCGGAAAAAAGGGTGAGATC+AGG | - | chr5.1:57448157-57448176 | MS.gene91223:CDS | 50.0% | |
| GAACCTACACAGGGTTGTGA+TGG | - | chr5.1:57447101-57447120 | MS.gene91223:CDS | 50.0% | |
| GATCCATCACAACCCTGTGT+AGG | + | chr5.1:57447107-57447126 | None:intergenic | 50.0% | |
| AACAACGATGCTCCCATGCG+TGG | + | chr5.1:57446830-57446849 | None:intergenic | 55.0% | |
| GGGGTCAGCTTTGCAATGGT+AGG | + | chr5.1:57446731-57446750 | None:intergenic | 55.0% | |
| !! | TGTCGTCGCTGCCGATTTGA+GGG | + | chr5.1:57447921-57447940 | None:intergenic | 55.0% |
| !! | TTGTCGTCGCTGCCGATTTG+AGG | + | chr5.1:57447922-57447941 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 57446665 | 57448209 | 57446665 | ID=MS.gene91223 |
| chr5.1 | mRNA | 57446665 | 57448209 | 57446665 | ID=MS.gene91223.t1;Parent=MS.gene91223 |
| chr5.1 | exon | 57447994 | 57448209 | 57447994 | ID=MS.gene91223.t1.exon1;Parent=MS.gene91223.t1 |
| chr5.1 | CDS | 57447994 | 57448209 | 57447994 | ID=cds.MS.gene91223.t1;Parent=MS.gene91223.t1 |
| chr5.1 | exon | 57447567 | 57447761 | 57447567 | ID=MS.gene91223.t1.exon2;Parent=MS.gene91223.t1 |
| chr5.1 | CDS | 57447567 | 57447761 | 57447567 | ID=cds.MS.gene91223.t1;Parent=MS.gene91223.t1 |
| chr5.1 | exon | 57446665 | 57447231 | 57446665 | ID=MS.gene91223.t1.exon3;Parent=MS.gene91223.t1 |
| chr5.1 | CDS | 57446665 | 57447231 | 57446665 | ID=cds.MS.gene91223.t1;Parent=MS.gene91223.t1 |
| Gene Sequence |
| Protein sequence |
