Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene91275.t1 | XP_013464874.1 | 93.9 | 456 | 25 | 1 | 1 | 453 | 1 | 456 | 2.50E-249 | 870.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene91275.t1 | Q67Y83 | 60.3 | 431 | 164 | 2 | 28 | 451 | 29 | 459 | 3.2e-152 | 539.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene91275.t1 | A0A072VA69 | 93.9 | 456 | 25 | 1 | 1 | 453 | 1 | 456 | 1.8e-249 | 870.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene91275 | MS.gene05805 | PPI |
MS.gene91275 | MS.gene037763 | PPI |
MS.gene91275 | MS.gene43589 | PPI |
MS.gene022111 | MS.gene91275 | PPI |
MS.gene91275 | MS.gene05803 | PPI |
MS.gene020426 | MS.gene91275 | PPI |
MS.gene91275 | MS.gene002690 | PPI |
MS.gene91275 | MS.gene43588 | PPI |
MS.gene91275 | MS.gene002688 | PPI |
MS.gene91275 | MS.gene05806 | PPI |
MS.gene43592 | MS.gene91275 | PPI |
MS.gene91275 | MS.gene23880 | PPI |
MS.gene43171 | MS.gene91275 | PPI |
MS.gene91275 | MS.gene004369 | PPI |
MS.gene91275 | MS.gene002689 | PPI |
MS.gene91275 | MS.gene43593 | PPI |
MS.gene91275 | MS.gene97299 | PPI |
MS.gene91275 | MS.gene004371 | PPI |
MS.gene037764 | MS.gene91275 | PPI |
MS.gene91275 | MS.gene05804 | PPI |
MS.gene91275 | MS.gene80760 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene91275.t1 | MTR_2g084530 | 93.860 | 456 | 25 | 1 | 1 | 453 | 1 | 456 | 0.0 | 841 |
MS.gene91275.t1 | MTR_4g056520 | 68.410 | 459 | 138 | 2 | 1 | 453 | 1 | 458 | 0.0 | 617 |
MS.gene91275.t1 | MTR_4g057600 | 25.862 | 406 | 268 | 9 | 44 | 444 | 108 | 485 | 4.06e-34 | 134 |
MS.gene91275.t1 | MTR_1g050545 | 28.637 | 433 | 253 | 15 | 38 | 453 | 90 | 483 | 2.18e-33 | 132 |
MS.gene91275.t1 | MTR_2g095730 | 28.333 | 420 | 244 | 16 | 44 | 444 | 107 | 488 | 4.89e-33 | 131 |
MS.gene91275.t1 | MTR_1g094155 | 25.901 | 444 | 273 | 13 | 29 | 452 | 86 | 493 | 6.64e-33 | 130 |
MS.gene91275.t1 | MTR_2g095750 | 27.206 | 408 | 261 | 9 | 44 | 444 | 113 | 491 | 2.76e-31 | 126 |
MS.gene91275.t1 | MTR_4g057585 | 25.858 | 437 | 279 | 13 | 21 | 445 | 84 | 487 | 1.23e-30 | 124 |
MS.gene91275.t1 | MTR_4g057595 | 26.726 | 449 | 279 | 14 | 11 | 445 | 76 | 488 | 1.44e-30 | 124 |
MS.gene91275.t1 | MTR_4g057570 | 26.047 | 430 | 281 | 14 | 27 | 446 | 83 | 485 | 2.55e-30 | 123 |
MS.gene91275.t1 | MTR_5g097180 | 26.573 | 429 | 251 | 14 | 36 | 444 | 44 | 428 | 1.48e-29 | 120 |
MS.gene91275.t1 | MTR_4g084710 | 24.703 | 421 | 269 | 11 | 36 | 444 | 46 | 430 | 5.40e-28 | 115 |
MS.gene91275.t1 | MTR_4g075150 | 24.942 | 433 | 271 | 13 | 36 | 444 | 51 | 453 | 6.18e-25 | 107 |
MS.gene91275.t1 | MTR_1g020090 | 25.727 | 447 | 274 | 16 | 17 | 446 | 84 | 489 | 2.58e-24 | 105 |
MS.gene91275.t1 | MTR_7g013790 | 25.858 | 437 | 260 | 16 | 36 | 443 | 52 | 453 | 4.54e-24 | 104 |
MS.gene91275.t1 | MTR_2g012850 | 25.231 | 432 | 266 | 14 | 36 | 441 | 52 | 452 | 9.18e-24 | 103 |
MS.gene91275.t1 | MTR_3g079590 | 24.594 | 431 | 262 | 16 | 36 | 446 | 95 | 482 | 1.33e-23 | 103 |
MS.gene91275.t1 | MTR_3g079560 | 24.883 | 426 | 267 | 13 | 36 | 446 | 95 | 482 | 2.51e-23 | 102 |
MS.gene91275.t1 | MTR_4g075150 | 24.942 | 433 | 269 | 14 | 36 | 444 | 51 | 451 | 2.61e-23 | 102 |
MS.gene91275.t1 | MTR_2g012860 | 25.508 | 443 | 253 | 14 | 36 | 441 | 58 | 460 | 2.62e-23 | 102 |
MS.gene91275.t1 | MTR_1g021020 | 24.651 | 430 | 260 | 15 | 36 | 446 | 95 | 479 | 4.83e-23 | 102 |
MS.gene91275.t1 | MTR_8g099930 | 25.592 | 422 | 268 | 15 | 36 | 437 | 50 | 445 | 5.47e-23 | 101 |
MS.gene91275.t1 | MTR_4g089155 | 25.342 | 438 | 260 | 14 | 36 | 441 | 70 | 472 | 1.32e-22 | 100 |
MS.gene91275.t1 | MTR_4g122950 | 25.571 | 438 | 275 | 18 | 36 | 446 | 56 | 469 | 2.75e-22 | 99.8 |
MS.gene91275.t1 | MTR_1g021010 | 24.299 | 428 | 265 | 13 | 36 | 446 | 93 | 478 | 3.33e-22 | 99.4 |
MS.gene91275.t1 | MTR_1g040370 | 25.060 | 419 | 248 | 11 | 36 | 446 | 47 | 407 | 8.74e-22 | 97.4 |
MS.gene91275.t1 | MTR_3g498755 | 26.526 | 426 | 260 | 17 | 36 | 437 | 32 | 428 | 1.09e-21 | 97.4 |
MS.gene91275.t1 | MTR_3g079570 | 24.648 | 426 | 267 | 13 | 36 | 446 | 96 | 482 | 2.72e-21 | 96.7 |
MS.gene91275.t1 | MTR_2g095710 | 25.000 | 412 | 251 | 12 | 49 | 444 | 105 | 474 | 2.83e-21 | 96.7 |
MS.gene91275.t1 | MTR_3g079600 | 24.171 | 422 | 278 | 11 | 36 | 446 | 93 | 483 | 5.08e-21 | 95.9 |
MS.gene91275.t1 | MTR_3g034290 | 25.060 | 419 | 275 | 12 | 36 | 444 | 91 | 480 | 5.88e-21 | 95.5 |
MS.gene91275.t1 | MTR_3g434850 | 26.144 | 459 | 294 | 19 | 6 | 446 | 15 | 446 | 8.82e-21 | 94.7 |
MS.gene91275.t1 | MTR_0003s0560 | 25.369 | 406 | 232 | 15 | 65 | 444 | 117 | 477 | 1.18e-20 | 94.7 |
MS.gene91275.t1 | MTR_2g449850 | 26.185 | 401 | 249 | 16 | 57 | 437 | 72 | 445 | 1.26e-20 | 94.4 |
MS.gene91275.t1 | MTR_4g122960 | 24.434 | 442 | 273 | 18 | 36 | 446 | 56 | 467 | 1.98e-20 | 94.0 |
MS.gene91275.t1 | MTR_3g079620 | 32.948 | 173 | 103 | 5 | 36 | 199 | 95 | 263 | 2.00e-20 | 94.0 |
MS.gene91275.t1 | MTR_7g021130 | 26.603 | 421 | 263 | 17 | 36 | 437 | 47 | 440 | 5.26e-20 | 92.4 |
MS.gene91275.t1 | MTR_0003s0560 | 27.155 | 232 | 139 | 8 | 36 | 244 | 90 | 314 | 3.30e-19 | 89.0 |
MS.gene91275.t1 | MTR_2g062980 | 32.934 | 167 | 97 | 6 | 36 | 194 | 57 | 216 | 1.40e-18 | 88.2 |
MS.gene91275.t1 | MTR_1g095540 | 24.009 | 429 | 271 | 19 | 31 | 437 | 44 | 439 | 1.83e-18 | 87.8 |
MS.gene91275.t1 | MTR_1g095560 | 22.402 | 433 | 273 | 16 | 31 | 437 | 44 | 439 | 3.29e-18 | 87.0 |
MS.gene91275.t1 | MTR_2g062990 | 34.437 | 151 | 88 | 5 | 36 | 178 | 57 | 204 | 4.69e-18 | 86.7 |
MS.gene91275.t1 | MTR_7g080180 | 22.266 | 512 | 303 | 21 | 1 | 442 | 1 | 487 | 7.32e-18 | 86.3 |
MS.gene91275.t1 | MTR_2g081620 | 24.057 | 424 | 277 | 17 | 36 | 443 | 58 | 452 | 7.47e-18 | 86.3 |
MS.gene91275.t1 | MTR_3g079630 | 31.792 | 173 | 105 | 5 | 36 | 199 | 95 | 263 | 1.15e-17 | 85.5 |
MS.gene91275.t1 | MTR_2g063000 | 32.680 | 153 | 90 | 5 | 36 | 178 | 56 | 205 | 2.24e-17 | 84.7 |
MS.gene91275.t1 | MTR_8g011350 | 22.811 | 434 | 277 | 15 | 55 | 442 | 63 | 484 | 2.36e-17 | 84.7 |
MS.gene91275.t1 | MTR_3g090130 | 23.645 | 406 | 263 | 13 | 65 | 449 | 72 | 451 | 1.85e-16 | 81.6 |
MS.gene91275.t1 | MTR_1g095560 | 31.579 | 152 | 93 | 5 | 31 | 173 | 44 | 193 | 2.14e-16 | 81.6 |
MS.gene91275.t1 | MTR_3g090150 | 23.502 | 434 | 281 | 16 | 38 | 449 | 54 | 458 | 2.19e-16 | 81.6 |
MS.gene91275.t1 | MTR_3g034290 | 29.310 | 174 | 114 | 4 | 36 | 202 | 91 | 262 | 2.66e-16 | 80.9 |
MS.gene91275.t1 | MTR_5g072570 | 31.176 | 170 | 103 | 5 | 36 | 196 | 46 | 210 | 4.13e-16 | 80.9 |
MS.gene91275.t1 | MTR_7g080180 | 27.126 | 247 | 147 | 11 | 1 | 220 | 1 | 241 | 1.68e-15 | 79.0 |
MS.gene91275.t1 | MTR_8g011350 | 28.877 | 187 | 117 | 5 | 55 | 227 | 63 | 247 | 1.86e-15 | 79.0 |
MS.gene91275.t1 | MTR_7g051430 | 32.667 | 150 | 86 | 5 | 59 | 196 | 69 | 215 | 3.18e-14 | 74.7 |
MS.gene91275.t1 | MTR_7g051430 | 32.667 | 150 | 86 | 5 | 59 | 196 | 69 | 215 | 3.70e-14 | 74.7 |
MS.gene91275.t1 | MTR_2g018600 | 23.266 | 447 | 270 | 18 | 34 | 443 | 49 | 459 | 2.59e-13 | 72.0 |
MS.gene91275.t1 | MTR_3g114620 | 39.823 | 113 | 31 | 2 | 115 | 227 | 12 | 87 | 3.43e-13 | 65.5 |
MS.gene91275.t1 | MTR_2g018590 | 23.251 | 443 | 276 | 18 | 34 | 443 | 48 | 459 | 8.86e-13 | 70.5 |
MS.gene91275.t1 | MTR_3g100420 | 22.465 | 503 | 286 | 22 | 3 | 441 | 24 | 486 | 1.58e-11 | 66.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene91275.t1 | AT2G27920 | 62.037 | 432 | 155 | 4 | 28 | 451 | 29 | 459 | 0.0 | 543 |
MS.gene91275.t1 | AT2G27920 | 59.221 | 385 | 148 | 4 | 75 | 451 | 4 | 387 | 1.95e-157 | 451 |
MS.gene91275.t1 | AT2G27920 | 57.514 | 346 | 138 | 4 | 114 | 451 | 48 | 392 | 2.76e-133 | 390 |
MS.gene91275.t1 | AT3G45010 | 26.328 | 433 | 281 | 10 | 21 | 444 | 89 | 492 | 6.21e-38 | 145 |
MS.gene91275.t1 | AT3G10410 | 27.483 | 433 | 268 | 14 | 24 | 444 | 90 | 488 | 2.87e-33 | 132 |
MS.gene91275.t1 | AT5G22980 | 25.121 | 414 | 260 | 11 | 44 | 444 | 111 | 487 | 1.76e-32 | 129 |
MS.gene91275.t1 | AT1G15000 | 26.353 | 425 | 252 | 14 | 36 | 444 | 38 | 417 | 6.24e-32 | 127 |
MS.gene91275.t1 | AT1G11080 | 26.682 | 446 | 261 | 17 | 36 | 446 | 67 | 481 | 2.18e-24 | 105 |
MS.gene91275.t1 | AT1G11080 | 26.682 | 446 | 261 | 17 | 36 | 446 | 67 | 481 | 2.63e-24 | 105 |
MS.gene91275.t1 | AT4G15100 | 26.126 | 444 | 270 | 14 | 36 | 449 | 61 | 476 | 1.84e-23 | 103 |
MS.gene91275.t1 | AT1G61130 | 26.682 | 446 | 251 | 17 | 36 | 446 | 48 | 452 | 3.11e-22 | 99.4 |
MS.gene91275.t1 | AT5G23210 | 25.522 | 431 | 286 | 12 | 36 | 444 | 68 | 485 | 4.48e-22 | 99.0 |
MS.gene91275.t1 | AT3G52010 | 26.682 | 431 | 254 | 17 | 36 | 443 | 82 | 473 | 5.50e-22 | 98.6 |
MS.gene91275.t1 | AT2G35770 | 25.178 | 421 | 270 | 15 | 36 | 441 | 55 | 445 | 1.28e-21 | 97.4 |
MS.gene91275.t1 | AT2G24000 | 25.342 | 438 | 259 | 19 | 36 | 441 | 47 | 448 | 2.58e-20 | 93.6 |
MS.gene91275.t1 | AT2G35780 | 24.762 | 420 | 266 | 15 | 36 | 437 | 47 | 434 | 2.87e-20 | 93.2 |
MS.gene91275.t1 | AT4G30610 | 25.346 | 434 | 263 | 18 | 36 | 441 | 49 | 449 | 3.20e-20 | 93.2 |
MS.gene91275.t1 | AT3G52000 | 25.412 | 425 | 263 | 14 | 36 | 443 | 81 | 468 | 3.52e-20 | 93.2 |
MS.gene91275.t1 | AT2G05850 | 25.822 | 426 | 265 | 18 | 36 | 443 | 81 | 473 | 7.99e-20 | 92.4 |
MS.gene91275.t1 | AT4G30810 | 24.703 | 421 | 275 | 16 | 46 | 451 | 67 | 460 | 1.66e-19 | 91.3 |
MS.gene91275.t1 | AT2G33530 | 26.185 | 443 | 268 | 19 | 31 | 446 | 44 | 454 | 1.97e-19 | 90.9 |
MS.gene91275.t1 | AT1G43780 | 31.016 | 187 | 111 | 5 | 36 | 208 | 54 | 236 | 2.44e-19 | 90.9 |
MS.gene91275.t1 | AT2G24010 | 37.415 | 147 | 78 | 5 | 36 | 173 | 47 | 188 | 5.73e-19 | 89.4 |
MS.gene91275.t1 | AT3G63470 | 23.821 | 424 | 272 | 16 | 36 | 443 | 98 | 486 | 1.02e-18 | 89.0 |
MS.gene91275.t1 | AT5G23210 | 32.961 | 179 | 103 | 7 | 36 | 202 | 68 | 241 | 1.17e-18 | 88.6 |
MS.gene91275.t1 | AT5G08260 | 24.609 | 447 | 275 | 18 | 36 | 450 | 56 | 472 | 1.44e-18 | 88.6 |
MS.gene91275.t1 | AT1G28110 | 25.635 | 433 | 263 | 16 | 31 | 437 | 42 | 441 | 1.52e-18 | 88.2 |
MS.gene91275.t1 | AT1G28110 | 25.635 | 433 | 263 | 16 | 31 | 437 | 42 | 441 | 1.52e-18 | 88.2 |
MS.gene91275.t1 | AT5G42230 | 33.548 | 155 | 92 | 3 | 65 | 208 | 72 | 226 | 1.96e-18 | 87.8 |
MS.gene91275.t1 | AT5G42230 | 33.548 | 155 | 92 | 3 | 65 | 208 | 72 | 226 | 1.96e-18 | 87.8 |
MS.gene91275.t1 | AT4G12910 | 25.272 | 459 | 267 | 19 | 36 | 442 | 52 | 486 | 3.01e-18 | 87.4 |
MS.gene91275.t1 | AT3G07990 | 36.301 | 146 | 81 | 5 | 36 | 172 | 51 | 193 | 3.12e-18 | 87.4 |
MS.gene91275.t1 | AT5G42240 | 32.258 | 186 | 109 | 6 | 36 | 208 | 49 | 230 | 4.25e-18 | 87.0 |
MS.gene91275.t1 | AT3G17180 | 33.562 | 146 | 86 | 5 | 36 | 173 | 56 | 198 | 1.14e-17 | 85.5 |
MS.gene91275.t1 | AT3G17180 | 33.562 | 146 | 86 | 5 | 36 | 173 | 56 | 198 | 2.27e-17 | 84.7 |
MS.gene91275.t1 | AT4G12910 | 27.344 | 256 | 161 | 9 | 36 | 279 | 52 | 294 | 6.19e-17 | 83.2 |
MS.gene91275.t1 | AT2G12480 | 33.333 | 138 | 86 | 2 | 65 | 196 | 75 | 212 | 2.38e-16 | 81.3 |
MS.gene91275.t1 | AT2G12480 | 33.333 | 138 | 86 | 2 | 65 | 196 | 75 | 212 | 2.59e-16 | 81.3 |
MS.gene91275.t1 | AT2G12480 | 33.333 | 138 | 86 | 2 | 65 | 196 | 75 | 212 | 2.63e-16 | 81.3 |
MS.gene91275.t1 | AT2G12480 | 33.333 | 138 | 86 | 2 | 65 | 196 | 75 | 212 | 2.81e-16 | 81.3 |
MS.gene91275.t1 | AT3G25420 | 26.236 | 263 | 157 | 10 | 36 | 279 | 47 | 291 | 3.60e-16 | 81.3 |
MS.gene91275.t1 | AT3G52020 | 25.747 | 435 | 253 | 20 | 36 | 443 | 96 | 487 | 7.26e-16 | 80.1 |
MS.gene91275.t1 | AT3G02110 | 31.655 | 139 | 89 | 2 | 65 | 197 | 81 | 219 | 2.09e-15 | 78.6 |
MS.gene91275.t1 | AT2G24010 | 33.333 | 162 | 79 | 6 | 36 | 173 | 18 | 174 | 4.63e-15 | 76.6 |
MS.gene91275.t1 | AT2G24010 | 33.333 | 162 | 79 | 6 | 36 | 173 | 47 | 203 | 9.12e-15 | 76.6 |
MS.gene91275.t1 | AT2G24010 | 33.333 | 162 | 79 | 6 | 36 | 173 | 18 | 174 | 1.04e-14 | 76.6 |
MS.gene91275.t1 | AT5G36180 | 22.967 | 418 | 255 | 16 | 34 | 430 | 48 | 419 | 6.46e-14 | 73.9 |
MS.gene91275.t1 | AT5G22960 | 30.769 | 143 | 77 | 5 | 33 | 173 | 34 | 156 | 1.08e-13 | 70.1 |
MS.gene91275.t1 | AT1G73290 | 26.609 | 233 | 135 | 10 | 34 | 248 | 47 | 261 | 3.31e-13 | 70.5 |
MS.gene91275.t1 | AT3G56540 | 30.935 | 139 | 87 | 4 | 36 | 168 | 96 | 231 | 3.33e-13 | 70.1 |
MS.gene91275.t1 | AT1G73290 | 26.609 | 233 | 135 | 10 | 34 | 248 | 47 | 261 | 7.87e-13 | 70.5 |
MS.gene91275.t1 | AT1G73290 | 26.609 | 233 | 135 | 10 | 34 | 248 | 47 | 261 | 8.63e-13 | 70.5 |
MS.gene91275.t1 | AT1G73280 | 26.860 | 242 | 137 | 10 | 6 | 220 | 14 | 242 | 8.63e-13 | 70.1 |
MS.gene91275.t1 | AT1G73300 | 22.459 | 423 | 255 | 18 | 34 | 432 | 48 | 421 | 1.12e-12 | 70.1 |
MS.gene91275.t1 | AT1G73300 | 22.459 | 423 | 255 | 18 | 34 | 432 | 48 | 421 | 1.12e-12 | 70.1 |
MS.gene91275.t1 | AT1G73280 | 26.860 | 242 | 137 | 10 | 6 | 220 | 14 | 242 | 1.98e-12 | 69.3 |
MS.gene91275.t1 | AT2G22970 | 27.434 | 226 | 130 | 8 | 34 | 242 | 40 | 248 | 3.71e-12 | 67.8 |
MS.gene91275.t1 | AT2G22980 | 23.002 | 413 | 257 | 17 | 34 | 430 | 41 | 408 | 4.50e-12 | 68.2 |
MS.gene91275.t1 | AT2G22970 | 27.434 | 226 | 130 | 8 | 34 | 242 | 40 | 248 | 4.81e-12 | 68.2 |
MS.gene91275.t1 | AT2G22970 | 27.434 | 226 | 130 | 8 | 34 | 242 | 40 | 248 | 5.18e-12 | 67.8 |
MS.gene91275.t1 | AT2G22970 | 27.434 | 226 | 130 | 8 | 34 | 242 | 40 | 248 | 7.48e-12 | 67.4 |
MS.gene91275.t1 | AT1G73310 | 26.724 | 232 | 130 | 10 | 34 | 245 | 48 | 259 | 1.11e-11 | 67.0 |
MS.gene91275.t1 | AT1G73310 | 26.724 | 232 | 130 | 10 | 34 | 245 | 48 | 259 | 1.52e-11 | 66.6 |
MS.gene91275.t1 | AT2G22980 | 23.450 | 371 | 229 | 14 | 34 | 388 | 41 | 372 | 2.40e-11 | 65.9 |
MS.gene91275.t1 | AT2G22980 | 22.973 | 370 | 232 | 14 | 34 | 388 | 41 | 372 | 2.72e-11 | 65.9 |
MS.gene91275.t1 | AT3G12220 | 31.293 | 147 | 84 | 4 | 34 | 168 | 42 | 183 | 3.59e-11 | 65.1 |
MS.gene91275.t1 | AT3G12220 | 31.081 | 148 | 85 | 4 | 34 | 169 | 42 | 184 | 3.80e-11 | 65.1 |
MS.gene91275.t1 | AT1G73270 | 28.333 | 180 | 103 | 7 | 34 | 196 | 48 | 218 | 8.37e-11 | 64.3 |
MS.gene91275.t1 | AT3G10450 | 26.471 | 204 | 124 | 7 | 34 | 220 | 44 | 238 | 8.97e-11 | 63.9 |
MS.gene91275.t1 | AT1G73270 | 28.333 | 180 | 103 | 7 | 34 | 196 | 48 | 218 | 8.98e-11 | 64.3 |
MS.gene91275.t1 | AT3G12220 | 31.111 | 135 | 78 | 3 | 45 | 169 | 25 | 154 | 9.21e-11 | 63.9 |
Find 86 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GTTCTTACCACATAGTCTTC+TGG | 0.181107 | 2.3:+13487551 | None:intergenic |
CTTTGTGACACCATTTAATA+AGG | 0.235411 | 2.3:+13486958 | None:intergenic |
ACAAACTTACGTAATATTCT+TGG | 0.277759 | 2.3:+13486916 | None:intergenic |
TTTCTCACCTCAGCAATTCT+TGG | 0.278398 | 2.3:+13486754 | None:intergenic |
GATCTAGACACCTTATTAAA+TGG | 0.279796 | 2.3:-13486968 | MS.gene91275:CDS |
GAAATTCCTTGGCTCCAAAT+TGG | 0.297340 | 2.3:+13488638 | None:intergenic |
TGAATTTAACAGGGTGGTTC+AGG | 0.297436 | 2.3:-13488702 | MS.gene91275:intron |
CAAGTATCCAATAGAAGTTT+AGG | 0.309556 | 2.3:+13480347 | None:intergenic |
ATGAAAACCTAAACTTCTAT+TGG | 0.312505 | 2.3:-13480354 | MS.gene91275:CDS |
TGGTCCTCTTGATGCCAATT+TGG | 0.315573 | 2.3:-13488652 | MS.gene91275:CDS |
TTCTTACCACATAGTCTTCT+GGG | 0.318865 | 2.3:+13487552 | None:intergenic |
GCCAATCATTCTCTGGTTGC+AGG | 0.324301 | 2.3:-13488823 | MS.gene91275:CDS |
GGTGGTTCAGGAGTTGGATT+TGG | 0.332535 | 2.3:-13488690 | MS.gene91275:CDS |
TTTGTCACTCTTGTATTCCT+TGG | 0.347875 | 2.3:-13489289 | MS.gene91275:CDS |
GGAAAATTTGCTGTTACTCT+TGG | 0.356885 | 2.3:-13488150 | MS.gene91275:CDS |
CTCAACCAAGTGAAATTCCT+TGG | 0.361943 | 2.3:+13488627 | None:intergenic |
TGAAGATGGATTAGAAGAAT+GGG | 0.371841 | 2.3:-13489227 | MS.gene91275:CDS |
GTGAAGATGGATTAGAAGAA+TGG | 0.379824 | 2.3:-13489228 | MS.gene91275:CDS |
AAAAGCAGATTTGCTATTTG+TGG | 0.380443 | 2.3:-13488604 | MS.gene91275:intron |
TCACAGAAGCACACATGTTC+TGG | 0.387689 | 2.3:-13488893 | MS.gene91275:intron |
GTTGATGAGTTGCTAGCTCT+TGG | 0.389681 | 2.3:-13480747 | MS.gene91275:CDS |
CTTGACATGTCTTTCAAAAG+AGG | 0.392714 | 2.3:+13487439 | None:intergenic |
CAAACTTACGTAATATTCTT+GGG | 0.412359 | 2.3:+13486917 | None:intergenic |
CCCTGCAACCAGAGAATGAT+TGG | 0.421423 | 2.3:+13488822 | None:intergenic |
CTTTCACTTCCGCAATATAG+AGG | 0.424690 | 2.3:+13480403 | None:intergenic |
GAGCCAAGATTCAGTTCCCT+TGG | 0.431242 | 2.3:+13480582 | None:intergenic |
ATATGACTTAAAGAAGCCTT+TGG | 0.433079 | 2.3:+13480375 | None:intergenic |
TAGCAATAGCAGCAACTTTG+TGG | 0.433976 | 2.3:-13487222 | MS.gene91275:intron |
AAACTGAACCCTGTACCAAC+TGG | 0.435888 | 2.3:+13488309 | None:intergenic |
GCTATGCATGGCTGATCAAT+AGG | 0.438784 | 2.3:+13480157 | None:intergenic |
CAACCAAGGGAACTGAATCT+TGG | 0.446046 | 2.3:-13480585 | MS.gene91275:CDS |
TTGAGAACAGTTTGGCAGAA+AGG | 0.457698 | 2.3:-13487316 | MS.gene91275:intron |
ATTTGACATTGCAGTTCTCA+TGG | 0.458928 | 2.3:-13487465 | MS.gene91275:intron |
TAGGACAATCCAGTTGGTAC+AGG | 0.460572 | 2.3:-13488318 | MS.gene91275:CDS |
TAACAGGGTGGTTCAGGAGT+TGG | 0.461150 | 2.3:-13488696 | MS.gene91275:intron |
TTATCAATGCAACTTCTACA+TGG | 0.477050 | 2.3:-13487265 | MS.gene91275:CDS |
AGCCATGGCCAATCATTCTC+TGG | 0.493120 | 2.3:-13488830 | MS.gene91275:CDS |
GAGAATGATTGGCCATGGCT+TGG | 0.495127 | 2.3:+13488833 | None:intergenic |
TGTTACTTGTGTAGATGGCC+AGG | 0.495826 | 2.3:-13480457 | MS.gene91275:intron |
GGAGGGATTCTCCACTCTGA+AGG | 0.508853 | 2.3:+13488854 | None:intergenic |
GTGTGGTATTAGCAAACAGC+TGG | 0.517088 | 2.3:-13487580 | MS.gene91275:CDS |
ATATACTATCTTCAAGCCGC+TGG | 0.518830 | 2.3:+13480103 | None:intergenic |
GGTGCTTTGAAGAGTGAAGA+TGG | 0.519458 | 2.3:-13489241 | MS.gene91275:CDS |
ATGATTGGCCATGGCTTGGA+GGG | 0.520573 | 2.3:+13488837 | None:intergenic |
ATTAGATGAAGTAAGATACT+TGG | 0.520640 | 2.3:+13487003 | None:intergenic |
TTCTATTGGATACTTGATGC+TGG | 0.524231 | 2.3:-13480340 | MS.gene91275:CDS |
TCTCTTCTCAATTGTTGATG+AGG | 0.525067 | 2.3:+13487057 | None:intergenic |
AATGATTGGCCATGGCTTGG+AGG | 0.533677 | 2.3:+13488836 | None:intergenic |
TTGATGCCAATTTGGAGCCA+AGG | 0.533958 | 2.3:-13488644 | MS.gene91275:CDS |
ATCAAGCAACAACTTGAAGC+TGG | 0.544410 | 2.3:-13487293 | MS.gene91275:CDS |
TTTGACATTGCAGTTCTCAT+GGG | 0.549489 | 2.3:-13487464 | MS.gene91275:intron |
TGATCTCATTTGTGCAACCA+AGG | 0.557323 | 2.3:-13480599 | MS.gene91275:CDS |
GGAAGACTGAAGACTACACT+TGG | 0.560174 | 2.3:-13488099 | MS.gene91275:CDS |
AATATATAGGACAATCCAGT+TGG | 0.566074 | 2.3:-13488324 | MS.gene91275:intron |
CCAATCATTCTCTGGTTGCA+GGG | 0.566202 | 2.3:-13488822 | MS.gene91275:CDS |
TGGAGCCAAGGAATTTCACT+TGG | 0.566368 | 2.3:-13488632 | MS.gene91275:CDS |
GAGGGATTCTCCACTCTGAA+GGG | 0.578265 | 2.3:+13488855 | None:intergenic |
AACCAGAGAATGATTGGCCA+TGG | 0.587974 | 2.3:+13488828 | None:intergenic |
GATCTCATTTGTGCAACCAA+GGG | 0.589058 | 2.3:-13480598 | MS.gene91275:CDS |
GGCTCCAAATTGGCATCAAG+AGG | 0.589597 | 2.3:+13488648 | None:intergenic |
GAAGATGGATTAGAAGAATG+GGG | 0.592964 | 2.3:-13489226 | MS.gene91275:CDS |
TGCATAGCACTAAACATGGT+GGG | 0.593720 | 2.3:-13480142 | MS.gene91275:CDS |
GACAGAACTCCTCTATATTG+CGG | 0.597836 | 2.3:-13480412 | MS.gene91275:CDS |
TGGAGAATCCCTCCAAGCCA+TGG | 0.599073 | 2.3:-13488845 | MS.gene91275:CDS |
TTGACATTGCAGTTCTCATG+GGG | 0.607924 | 2.3:-13487463 | MS.gene91275:intron |
TATGAAACCAAGAATTGCTG+AGG | 0.611925 | 2.3:-13486761 | MS.gene91275:intron |
ACTTGTCAAAACTGATGAGG+AGG | 0.613052 | 2.3:-13488268 | MS.gene91275:CDS |
TGCAATTACACAGTCACCAG+CGG | 0.617459 | 2.3:-13480119 | MS.gene91275:CDS |
ATTACTTGTCAAAACTGATG+AGG | 0.618007 | 2.3:-13488271 | MS.gene91275:CDS |
CCTCGTAAAATAAGAAACCA+AGG | 0.630013 | 2.3:+13489272 | None:intergenic |
CAGAAGCACACATGTTCTGG+TGG | 0.633017 | 2.3:-13488890 | MS.gene91275:CDS |
AGACTGAAGACTACACTTGG+AGG | 0.634439 | 2.3:-13488096 | MS.gene91275:intron |
AGGACAATCCAGTTGGTACA+GGG | 0.637361 | 2.3:-13488317 | MS.gene91275:CDS |
TAATAATGTAGTCAAATCAG+TGG | 0.640150 | 2.3:+13488242 | None:intergenic |
GATCTCCCCAGAAGACTATG+TGG | 0.641298 | 2.3:-13487558 | MS.gene91275:intron |
TCTTACCACATAGTCTTCTG+GGG | 0.642606 | 2.3:+13487553 | None:intergenic |
GCCATGCATAGCACTAAACA+TGG | 0.646630 | 2.3:-13480146 | MS.gene91275:CDS |
GTCAATGTAACTGTGTACAA+TGG | 0.655505 | 2.3:-13480723 | MS.gene91275:CDS |
ATGTCAAGAATTGATGACAA+TGG | 0.657978 | 2.3:-13487424 | MS.gene91275:CDS |
ATGCATAGCACTAAACATGG+TGG | 0.666932 | 2.3:-13480143 | MS.gene91275:CDS |
TTACAAAAGTCCCTTCAGAG+TGG | 0.669530 | 2.3:-13488865 | MS.gene91275:CDS |
ACCATGTTTAGTGCTATGCA+TGG | 0.680684 | 2.3:+13480145 | None:intergenic |
ATCATTCTCTGGTTGCAGGG+AGG | 0.688272 | 2.3:-13488819 | MS.gene91275:CDS |
GGAAGTGAAAGAAAGACCAA+AGG | 0.702647 | 2.3:-13480391 | MS.gene91275:CDS |
TATTCAAAGAAATATCAATG+AGG | 0.703117 | 2.3:-13487033 | MS.gene91275:CDS |
AATTGCTGACAGATGGTATG+CGG | 0.759275 | 2.3:-13486821 | MS.gene91275:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.3 | gene | 13480114 | 13489332 | 13480114 | ID=MS.gene91275 |
chr2.3 | mRNA | 13480114 | 13489332 | 13480114 | ID=MS.gene91275.t1;Parent=MS.gene91275 |
chr2.3 | exon | 13489206 | 13489332 | 13489206 | ID=MS.gene91275.t1.exon1;Parent=MS.gene91275.t1 |
chr2.3 | CDS | 13489206 | 13489332 | 13489206 | ID=cds.MS.gene91275.t1;Parent=MS.gene91275.t1 |
chr2.3 | exon | 13488815 | 13488909 | 13488815 | ID=MS.gene91275.t1.exon2;Parent=MS.gene91275.t1 |
chr2.3 | CDS | 13488815 | 13488909 | 13488815 | ID=cds.MS.gene91275.t1;Parent=MS.gene91275.t1 |
chr2.3 | exon | 13488605 | 13488712 | 13488605 | ID=MS.gene91275.t1.exon3;Parent=MS.gene91275.t1 |
chr2.3 | CDS | 13488605 | 13488712 | 13488605 | ID=cds.MS.gene91275.t1;Parent=MS.gene91275.t1 |
chr2.3 | exon | 13488097 | 13488337 | 13488097 | ID=MS.gene91275.t1.exon4;Parent=MS.gene91275.t1 |
chr2.3 | CDS | 13488097 | 13488337 | 13488097 | ID=cds.MS.gene91275.t1;Parent=MS.gene91275.t1 |
chr2.3 | exon | 13487559 | 13487602 | 13487559 | ID=MS.gene91275.t1.exon5;Parent=MS.gene91275.t1 |
chr2.3 | CDS | 13487559 | 13487602 | 13487559 | ID=cds.MS.gene91275.t1;Parent=MS.gene91275.t1 |
chr2.3 | exon | 13487406 | 13487473 | 13487406 | ID=MS.gene91275.t1.exon6;Parent=MS.gene91275.t1 |
chr2.3 | CDS | 13487406 | 13487473 | 13487406 | ID=cds.MS.gene91275.t1;Parent=MS.gene91275.t1 |
chr2.3 | exon | 13487223 | 13487328 | 13487223 | ID=MS.gene91275.t1.exon7;Parent=MS.gene91275.t1 |
chr2.3 | CDS | 13487223 | 13487328 | 13487223 | ID=cds.MS.gene91275.t1;Parent=MS.gene91275.t1 |
chr2.3 | exon | 13486926 | 13487122 | 13486926 | ID=MS.gene91275.t1.exon8;Parent=MS.gene91275.t1 |
chr2.3 | CDS | 13486926 | 13487122 | 13486926 | ID=cds.MS.gene91275.t1;Parent=MS.gene91275.t1 |
chr2.3 | exon | 13486762 | 13486831 | 13486762 | ID=MS.gene91275.t1.exon9;Parent=MS.gene91275.t1 |
chr2.3 | CDS | 13486762 | 13486831 | 13486762 | ID=cds.MS.gene91275.t1;Parent=MS.gene91275.t1 |
chr2.3 | exon | 13480719 | 13480769 | 13480719 | ID=MS.gene91275.t1.exon10;Parent=MS.gene91275.t1 |
chr2.3 | CDS | 13480719 | 13480769 | 13480719 | ID=cds.MS.gene91275.t1;Parent=MS.gene91275.t1 |
chr2.3 | exon | 13480571 | 13480623 | 13480571 | ID=MS.gene91275.t1.exon11;Parent=MS.gene91275.t1 |
chr2.3 | CDS | 13480571 | 13480623 | 13480571 | ID=cds.MS.gene91275.t1;Parent=MS.gene91275.t1 |
chr2.3 | exon | 13480333 | 13480465 | 13480333 | ID=MS.gene91275.t1.exon12;Parent=MS.gene91275.t1 |
chr2.3 | CDS | 13480333 | 13480465 | 13480333 | ID=cds.MS.gene91275.t1;Parent=MS.gene91275.t1 |
chr2.3 | exon | 13480114 | 13480182 | 13480114 | ID=MS.gene91275.t1.exon13;Parent=MS.gene91275.t1 |
chr2.3 | CDS | 13480114 | 13480182 | 13480114 | ID=cds.MS.gene91275.t1;Parent=MS.gene91275.t1 |
Gene Sequence |
Protein sequence |