Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene91444.t1 | AGV54746.1 | 84.2 | 203 | 31 | 1 | 1 | 202 | 1 | 203 | 1.70E-91 | 345.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene91444.t1 | P32869 | 78.9 | 204 | 40 | 2 | 1 | 202 | 1 | 203 | 4.0e-86 | 318.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene91444.t1 | T2DMR3 | 84.2 | 203 | 31 | 1 | 1 | 202 | 1 | 203 | 1.2e-91 | 345.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049285 | MS.gene91444 | 0.800206 | 1.61E-48 | -1.69E-46 |
MS.gene049320 | MS.gene91444 | 0.813525 | 2.45E-51 | -1.69E-46 |
MS.gene049615 | MS.gene91444 | 0.80814 | 3.59E-50 | -1.69E-46 |
MS.gene05010 | MS.gene91444 | 0.811238 | 7.74E-51 | -1.69E-46 |
MS.gene050518 | MS.gene91444 | 0.801436 | 9.01E-49 | -1.69E-46 |
MS.gene050686 | MS.gene91444 | 0.801166 | 1.02E-48 | -1.69E-46 |
MS.gene05100 | MS.gene91444 | 0.807134 | 5.86E-50 | -1.69E-46 |
MS.gene051551 | MS.gene91444 | 0.801675 | 8.05E-49 | -1.69E-46 |
MS.gene052271 | MS.gene91444 | 0.806849 | 6.74E-50 | -1.69E-46 |
MS.gene053009 | MS.gene91444 | 0.800522 | 1.39E-48 | -1.69E-46 |
MS.gene053213 | MS.gene91444 | 0.80463 | 1.97E-49 | -1.69E-46 |
MS.gene054642 | MS.gene91444 | 0.812599 | 3.91E-51 | -1.69E-46 |
MS.gene055362 | MS.gene91444 | 0.818978 | 1.48E-52 | -1.69E-46 |
MS.gene056374 | MS.gene91444 | 0.83322 | 6.04E-56 | -1.69E-46 |
MS.gene056657 | MS.gene91444 | 0.803912 | 2.78E-49 | -1.69E-46 |
MS.gene057129 | MS.gene91444 | 0.817484 | 3.22E-52 | -1.69E-46 |
MS.gene059022 | MS.gene91444 | 0.808515 | 2.98E-50 | -1.69E-46 |
MS.gene060356 | MS.gene91444 | 0.801562 | 8.49E-49 | -1.69E-46 |
MS.gene060482 | MS.gene91444 | 0.814409 | 1.56E-51 | -1.69E-46 |
MS.gene061200 | MS.gene91444 | 0.810692 | 1.02E-50 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene91444.t1 | MTR_1g104630 | 81.188 | 202 | 25 | 1 | 1 | 202 | 1 | 189 | 1.80e-115 | 327 |
MS.gene91444.t1 | MTR_5g006130 | 77.358 | 212 | 31 | 2 | 1 | 202 | 1 | 205 | 7.91e-113 | 320 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene91444.t1 | AT1G03130 | 79.290 | 169 | 29 | 1 | 40 | 202 | 32 | 200 | 4.97e-96 | 278 |
MS.gene91444.t1 | AT4G02770 | 90.210 | 143 | 14 | 0 | 60 | 202 | 62 | 204 | 4.18e-95 | 276 |
Find 79 sgRNAs with CRISPR-Local
Find 85 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCAGTGCTGCCACTGAAAAT+TGG | 0.193952 | 1.2:+77558201 | None:intergenic |
CGACCCGGGTTCACTTTCTC+TGG | 0.253150 | 1.2:+77557922 | None:intergenic |
CAACTTGGGCCTTACATAAA+AGG | 0.267884 | 1.2:+77558175 | None:intergenic |
AAAATTGGGGAGGGAGTGTT+TGG | 0.285103 | 1.2:+77558216 | None:intergenic |
AAGGGGTTGGTCAGAACTTT+AGG | 0.293589 | 1.2:-77557897 | MS.gene91444:CDS |
ATTTCAAAGATTTGTTCTTT+TGG | 0.302487 | 1.2:+77558123 | None:intergenic |
CCTTGCTAACTTGAGAAGAT+TGG | 0.306141 | 1.2:+77558065 | None:intergenic |
CAGTGCTGCCACTGAAAATT+GGG | 0.315756 | 1.2:+77558202 | None:intergenic |
GGTCAGAACTTTAGGTCTAT+TGG | 0.344103 | 1.2:-77557889 | MS.gene91444:CDS |
ATTGTGAGCTTGAGAGGGTT+TGG | 0.372107 | 1.2:+77558318 | None:intergenic |
AGAGATACGGTCATTAGGTT+TGG | 0.376453 | 1.2:+77558380 | None:intergenic |
CTCTTCACCCATCCTCTCTC+TGG | 0.383954 | 1.2:-77558405 | MS.gene91444:CDS |
AAAGAACAATGTTTGGCTCT+TGG | 0.389124 | 1.2:-77558042 | MS.gene91444:CDS |
GGTACAGAGATACGGTCATT+AGG | 0.394276 | 1.2:+77558375 | None:intergenic |
AGCAAGGAAAGAACAATGTT+TGG | 0.394375 | 1.2:-77558049 | MS.gene91444:CDS |
CTTGCTAACTTGAGAAGATT+GGG | 0.409133 | 1.2:+77558066 | None:intergenic |
TGGGAAACACTCTATAGAAT+TGG | 0.417334 | 1.2:+77557986 | None:intergenic |
GAGATACGGTCATTAGGTTT+GGG | 0.426468 | 1.2:+77558381 | None:intergenic |
TCTGGGTACACACCATCCTT+AGG | 0.434810 | 1.2:+77557940 | None:intergenic |
TGACCAACCCCTTGGCGACC+CGG | 0.439253 | 1.2:+77557907 | None:intergenic |
TCTATAGAGTGTTTCCCAAT+GGG | 0.441504 | 1.2:-77557981 | MS.gene91444:CDS |
CCACTGAACTTAACCTCTAC+AGG | 0.458444 | 1.2:+77557853 | None:intergenic |
AAGTATTGAACTTCCCCATT+GGG | 0.462594 | 1.2:+77557967 | None:intergenic |
CTTGAAATTGTGAGCTTGAG+AGG | 0.480961 | 1.2:+77558312 | None:intergenic |
CAAATCTTTGAAATGCCTAC+TGG | 0.482126 | 1.2:-77558114 | MS.gene91444:CDS |
GACCCGGGTTCACTTTCTCT+GGG | 0.486087 | 1.2:+77557923 | None:intergenic |
GTTTGGGACCAGAGAGAGGA+TGG | 0.489586 | 1.2:+77558397 | None:intergenic |
AAAGTGAACCCGGGTCGCCA+AGG | 0.500800 | 1.2:-77557916 | MS.gene91444:CDS |
TCACATAAAATTCCTCAACT+TGG | 0.507482 | 1.2:+77558160 | None:intergenic |
AAATTGGGGAGGGAGTGTTT+GGG | 0.508064 | 1.2:+77558217 | None:intergenic |
TCAGGTGGGGTGAAGCCAAT+TGG | 0.510396 | 1.2:+77558246 | None:intergenic |
GAAGCAACAGAGGCACCAAT+TGG | 0.510520 | 1.2:-77558261 | MS.gene91444:CDS |
AACCCGGGTCGCCAAGGGGT+TGG | 0.516971 | 1.2:-77557910 | MS.gene91444:CDS |
AGAGAGAGGATGGGTGAAGA+GGG | 0.517214 | 1.2:+77558407 | None:intergenic |
GACCAACCCCTTGGCGACCC+GGG | 0.524362 | 1.2:+77557908 | None:intergenic |
AATGTGGGTGATTGTTTCCA+TGG | 0.524862 | 1.2:+77558354 | None:intergenic |
CAGAGAGAGGATGGGTGAAG+AGG | 0.528826 | 1.2:+77558406 | None:intergenic |
GAGCTTGAGAGGGTTTGGAT+TGG | 0.531093 | 1.2:+77558323 | None:intergenic |
GAGAGGATGGGTGAAGAGGG+AGG | 0.532061 | 1.2:+77558410 | None:intergenic |
TTCTATAGAGTGTTTCCCAA+TGG | 0.534519 | 1.2:-77557982 | MS.gene91444:CDS |
GAGAGGGTTTGGATTGGTGA+AGG | 0.539245 | 1.2:+77558329 | None:intergenic |
CAAGTATTGAACTTCCCCAT+TGG | 0.539423 | 1.2:+77557966 | None:intergenic |
GAGGGAGGTTTGAGTTGTCA+TGG | 0.540329 | 1.2:+77558425 | None:intergenic |
TGGATTGGTGAAGGACAATG+TGG | 0.545639 | 1.2:+77558338 | None:intergenic |
AAGTGAACCCGGGTCGCCAA+GGG | 0.549528 | 1.2:-77557915 | MS.gene91444:CDS |
GTTTCCATGGTACAGAGATA+CGG | 0.551001 | 1.2:+77558367 | None:intergenic |
CACATAAAATTCCTCAACTT+GGG | 0.551301 | 1.2:+77558161 | None:intergenic |
TTGAAATTGTGAGCTTGAGA+GGG | 0.558382 | 1.2:+77558313 | None:intergenic |
ATTGGGACCTTCCCTCATGA+TGG | 0.564788 | 1.2:+77558083 | None:intergenic |
GTACCCAGAGAAAGTGAACC+CGG | 0.564935 | 1.2:-77557926 | MS.gene91444:CDS |
GGAGTGTTTGGGACTAACTC+AGG | 0.569094 | 1.2:+77558228 | None:intergenic |
TAAAGTTCTGACCAACCCCT+TGG | 0.570035 | 1.2:+77557899 | None:intergenic |
TTTATGTAAGGCCCAAGTTG+AGG | 0.578463 | 1.2:-77558172 | MS.gene91444:CDS |
AGTTCAATACTTGCATCCTA+AGG | 0.578655 | 1.2:-77557956 | MS.gene91444:CDS |
TGTTTGGGACTAACTCAGGT+GGG | 0.578995 | 1.2:+77558232 | None:intergenic |
GTGTTTGGGACTAACTCAGG+TGG | 0.582061 | 1.2:+77558231 | None:intergenic |
CCAATCTTCTCAAGTTAGCA+AGG | 0.583877 | 1.2:-77558065 | MS.gene91444:CDS |
CAATACTTGCATCCTAAGGA+TGG | 0.585635 | 1.2:-77557952 | MS.gene91444:CDS |
TGGCTCTTGGAACTACGTTG+AGG | 0.587212 | 1.2:-77558029 | MS.gene91444:CDS |
CTGGTGGTGCAGCCATCATG+AGG | 0.591206 | 1.2:-77558095 | MS.gene91444:CDS |
TAAGAATGTTAGTCCTGTAG+AGG | 0.604608 | 1.2:-77557866 | MS.gene91444:CDS |
CTGCCACTGAAAATTGGGGA+GGG | 0.607497 | 1.2:+77558207 | None:intergenic |
CCTGTAGAGGTTAAGTTCAG+TGG | 0.610539 | 1.2:-77557853 | MS.gene91444:CDS |
CATAACAGCAGCTGTTGCTG+AGG | 0.614265 | 1.2:-77558283 | MS.gene91444:CDS |
TTAGGTTTGGGACCAGAGAG+AGG | 0.625510 | 1.2:+77558393 | None:intergenic |
AGTGCTGCCACTGAAAATTG+GGG | 0.629529 | 1.2:+77558203 | None:intergenic |
GGTGCAGCCATCATGAGGGA+AGG | 0.635464 | 1.2:-77558090 | MS.gene91444:CDS |
TTTGGGACCAGAGAGAGGAT+GGG | 0.646221 | 1.2:+77558398 | None:intergenic |
TGTTGCTGAGGAAGCAACAG+AGG | 0.646977 | 1.2:-77558271 | MS.gene91444:CDS |
ATGATGGCTGCACCACCAGT+AGG | 0.647307 | 1.2:+77558099 | None:intergenic |
GTTTGGGACTAACTCAGGTG+GGG | 0.653328 | 1.2:+77558233 | None:intergenic |
GCTGCCACTGAAAATTGGGG+AGG | 0.656201 | 1.2:+77558206 | None:intergenic |
CTATAGAGTGTTTCCCAATG+GGG | 0.656977 | 1.2:-77557980 | MS.gene91444:CDS |
AGTGAACCCGGGTCGCCAAG+GGG | 0.658596 | 1.2:-77557914 | MS.gene91444:CDS |
ATCTTTGAAATGCCTACTGG+TGG | 0.664160 | 1.2:-77558111 | MS.gene91444:CDS |
TGGTGGTGCAGCCATCATGA+GGG | 0.675901 | 1.2:-77558094 | MS.gene91444:CDS |
TACCCAGAGAAAGTGAACCC+GGG | 0.686978 | 1.2:-77557925 | MS.gene91444:CDS |
ATGACCGTATCTCTGTACCA+TGG | 0.695290 | 1.2:-77558371 | MS.gene91444:CDS |
GGATTGGTGAAGGACAATGT+GGG | 0.717553 | 1.2:+77558339 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATTTCAAAGATTTGTTCTTT+TGG | + | chr1.2:77558155-77558174 | None:intergenic | 20.0% |
CACATAAAATTCCTCAACTT+GGG | + | chr1.2:77558117-77558136 | None:intergenic | 30.0% | |
TCACATAAAATTCCTCAACT+TGG | + | chr1.2:77558118-77558137 | None:intergenic | 30.0% | |
! | AGGAATTTTATGTGATCACA+TGG | - | chr1.2:77558123-77558142 | MS.gene91444:CDS | 30.0% |
! | GGAATTTTATGTGATCACAT+GGG | - | chr1.2:77558124-77558143 | MS.gene91444:CDS | 30.0% |
AGCAAGGAAAGAACAATGTT+TGG | - | chr1.2:77558226-77558245 | MS.gene91444:CDS | 35.0% | |
AGTTCAATACTTGCATCCTA+AGG | - | chr1.2:77558319-77558338 | MS.gene91444:CDS | 35.0% | |
CTTGCTAACTTGAGAAGATT+GGG | + | chr1.2:77558212-77558231 | None:intergenic | 35.0% | |
TAAGAATGTTAGTCCTGTAG+AGG | - | chr1.2:77558409-77558428 | MS.gene91444:CDS | 35.0% | |
TGGGAAACACTCTATAGAAT+TGG | + | chr1.2:77558292-77558311 | None:intergenic | 35.0% | |
TTGAAATTGTGAGCTTGAGA+GGG | + | chr1.2:77557965-77557984 | None:intergenic | 35.0% | |
! | TCTATAGAGTGTTTCCCAAT+GGG | - | chr1.2:77558294-77558313 | MS.gene91444:CDS | 35.0% |
! | TTCTATAGAGTGTTTCCCAA+TGG | - | chr1.2:77558293-77558312 | MS.gene91444:CDS | 35.0% |
!! | AAAGAACAATGTTTGGCTCT+TGG | - | chr1.2:77558233-77558252 | MS.gene91444:CDS | 35.0% |
!! | AAGTATTGAACTTCCCCATT+GGG | + | chr1.2:77558311-77558330 | None:intergenic | 35.0% |
!! | CAAATCTTTGAAATGCCTAC+TGG | - | chr1.2:77558161-77558180 | MS.gene91444:CDS | 35.0% |
AATGTGGGTGATTGTTTCCA+TGG | + | chr1.2:77557924-77557943 | None:intergenic | 40.0% | |
AGAGATACGGTCATTAGGTT+TGG | + | chr1.2:77557898-77557917 | None:intergenic | 40.0% | |
CAACTTGGGCCTTACATAAA+AGG | + | chr1.2:77558103-77558122 | None:intergenic | 40.0% | |
CAATACTTGCATCCTAAGGA+TGG | - | chr1.2:77558323-77558342 | MS.gene91444:CDS | 40.0% | |
CCAATCTTCTCAAGTTAGCA+AGG | - | chr1.2:77558210-77558229 | MS.gene91444:CDS | 40.0% | |
CCTTGCTAACTTGAGAAGAT+TGG | + | chr1.2:77558213-77558232 | None:intergenic | 40.0% | |
CTTGAAATTGTGAGCTTGAG+AGG | + | chr1.2:77557966-77557985 | None:intergenic | 40.0% | |
GAGATACGGTCATTAGGTTT+GGG | + | chr1.2:77557897-77557916 | None:intergenic | 40.0% | |
GGTCAGAACTTTAGGTCTAT+TGG | - | chr1.2:77558386-77558405 | MS.gene91444:CDS | 40.0% | |
GTTTCCATGGTACAGAGATA+CGG | + | chr1.2:77557911-77557930 | None:intergenic | 40.0% | |
TTTATGTAAGGCCCAAGTTG+AGG | - | chr1.2:77558103-77558122 | MS.gene91444:CDS | 40.0% | |
! | CTATAGAGTGTTTCCCAATG+GGG | - | chr1.2:77558295-77558314 | MS.gene91444:CDS | 40.0% |
!! | ATCTTTGAAATGCCTACTGG+TGG | - | chr1.2:77558164-77558183 | MS.gene91444:CDS | 40.0% |
!! | CAAGTATTGAACTTCCCCAT+TGG | + | chr1.2:77558312-77558331 | None:intergenic | 40.0% |
AGTGCTGCCACTGAAAATTG+GGG | + | chr1.2:77558075-77558094 | None:intergenic | 45.0% | |
ATGACCGTATCTCTGTACCA+TGG | - | chr1.2:77557904-77557923 | MS.gene91444:CDS | 45.0% | |
ATTGTGAGCTTGAGAGGGTT+TGG | + | chr1.2:77557960-77557979 | None:intergenic | 45.0% | |
CAGTGCTGCCACTGAAAATT+GGG | + | chr1.2:77558076-77558095 | None:intergenic | 45.0% | |
CCACTGAACTTAACCTCTAC+AGG | + | chr1.2:77558425-77558444 | None:intergenic | 45.0% | |
CCTGTAGAGGTTAAGTTCAG+TGG | - | chr1.2:77558422-77558441 | MS.gene91444:CDS | 45.0% | |
GGTACAGAGATACGGTCATT+AGG | + | chr1.2:77557903-77557922 | None:intergenic | 45.0% | |
! | CACTGGAGGCCTTTTATGTA+AGG | - | chr1.2:77558091-77558110 | MS.gene91444:CDS | 45.0% |
! | GGATTGGTGAAGGACAATGT+GGG | + | chr1.2:77557939-77557958 | None:intergenic | 45.0% |
! | TAAAGTTCTGACCAACCCCT+TGG | + | chr1.2:77558379-77558398 | None:intergenic | 45.0% |
! | TGTTTGGGACTAACTCAGGT+GGG | + | chr1.2:77558046-77558065 | None:intergenic | 45.0% |
!! | AAAATTGGGGAGGGAGTGTT+TGG | + | chr1.2:77558062-77558081 | None:intergenic | 45.0% |
!! | AAATTGGGGAGGGAGTGTTT+GGG | + | chr1.2:77558061-77558080 | None:intergenic | 45.0% |
!! | AAGGGGTTGGTCAGAACTTT+AGG | - | chr1.2:77558378-77558397 | MS.gene91444:CDS | 45.0% |
!! | TGGATTGGTGAAGGACAATG+TGG | + | chr1.2:77557940-77557959 | None:intergenic | 45.0% |
AGAGAGAGGATGGGTGAAGA+GGG | + | chr1.2:77557871-77557890 | None:intergenic | 50.0% | |
ATTGGGACCTTCCCTCATGA+TGG | + | chr1.2:77558195-77558214 | None:intergenic | 50.0% | |
CATAACAGCAGCTGTTGCTG+AGG | - | chr1.2:77557992-77558011 | MS.gene91444:CDS | 50.0% | |
CCAGTGCTGCCACTGAAAAT+TGG | + | chr1.2:77558077-77558096 | None:intergenic | 50.0% | |
CTGCCACTGAAAATTGGGGA+GGG | + | chr1.2:77558071-77558090 | None:intergenic | 50.0% | |
GAGCTTGAGAGGGTTTGGAT+TGG | + | chr1.2:77557955-77557974 | None:intergenic | 50.0% | |
GTACCCAGAGAAAGTGAACC+CGG | - | chr1.2:77558349-77558368 | MS.gene91444:CDS | 50.0% | |
TACCCAGAGAAAGTGAACCC+GGG | - | chr1.2:77558350-77558369 | MS.gene91444:CDS | 50.0% | |
TCTGGGTACACACCATCCTT+AGG | + | chr1.2:77558338-77558357 | None:intergenic | 50.0% | |
TGGCTCTTGGAACTACGTTG+AGG | - | chr1.2:77558246-77558265 | MS.gene91444:CDS | 50.0% | |
TGTTGCTGAGGAAGCAACAG+AGG | - | chr1.2:77558004-77558023 | MS.gene91444:CDS | 50.0% | |
! | ACTCCCTCCCCAATTTTCAG+TGG | - | chr1.2:77558065-77558084 | MS.gene91444:CDS | 50.0% |
! | CCAATTTTCAGTGGCAGCAC+TGG | - | chr1.2:77558074-77558093 | MS.gene91444:CDS | 50.0% |
! | GGAGTGTTTGGGACTAACTC+AGG | + | chr1.2:77558050-77558069 | None:intergenic | 50.0% |
! | GTGTTTGGGACTAACTCAGG+TGG | + | chr1.2:77558047-77558066 | None:intergenic | 50.0% |
! | GTTTGGGACTAACTCAGGTG+GGG | + | chr1.2:77558045-77558064 | None:intergenic | 50.0% |
! | TTAGGTTTGGGACCAGAGAG+AGG | + | chr1.2:77557885-77557904 | None:intergenic | 50.0% |
! | TTTGGGACCAGAGAGAGGAT+GGG | + | chr1.2:77557880-77557899 | None:intergenic | 50.0% |
!! | ATTTTCAGTGGCAGCACTGG+AGG | - | chr1.2:77558077-77558096 | MS.gene91444:CDS | 50.0% |
!! | GAAGCAACAGAGGCACCAAT+TGG | - | chr1.2:77558014-77558033 | MS.gene91444:CDS | 50.0% |
!! | GAGAGGGTTTGGATTGGTGA+AGG | + | chr1.2:77557949-77557968 | None:intergenic | 50.0% |
!! | GAGGGAGGTTTGAGTTGTCA+TGG | + | chr1.2:77557853-77557872 | None:intergenic | 50.0% |
ATGATGGCTGCACCACCAGT+AGG | + | chr1.2:77558179-77558198 | None:intergenic | 55.0% | |
CAGAGAGAGGATGGGTGAAG+AGG | + | chr1.2:77557872-77557891 | None:intergenic | 55.0% | |
CTCTTCACCCATCCTCTCTC+TGG | - | chr1.2:77557870-77557889 | MS.gene91444:CDS | 55.0% | |
GACCCGGGTTCACTTTCTCT+GGG | + | chr1.2:77558355-77558374 | None:intergenic | 55.0% | |
GCTGCCACTGAAAATTGGGG+AGG | + | chr1.2:77558072-77558091 | None:intergenic | 55.0% | |
TCAGGTGGGGTGAAGCCAAT+TGG | + | chr1.2:77558032-77558051 | None:intergenic | 55.0% | |
! | GTTTGGGACCAGAGAGAGGA+TGG | + | chr1.2:77557881-77557900 | None:intergenic | 55.0% |
! | TGGTGGTGCAGCCATCATGA+GGG | - | chr1.2:77558181-77558200 | MS.gene91444:CDS | 55.0% |
AAAGTGAACCCGGGTCGCCA+AGG | - | chr1.2:77558359-77558378 | MS.gene91444:CDS | 60.0% | |
AAGTGAACCCGGGTCGCCAA+GGG | - | chr1.2:77558360-77558379 | MS.gene91444:CDS | 60.0% | |
CGACCCGGGTTCACTTTCTC+TGG | + | chr1.2:77558356-77558375 | None:intergenic | 60.0% | |
GAGAGGATGGGTGAAGAGGG+AGG | + | chr1.2:77557868-77557887 | None:intergenic | 60.0% | |
GGTGCAGCCATCATGAGGGA+AGG | - | chr1.2:77558185-77558204 | MS.gene91444:CDS | 60.0% | |
! | CTGGTGGTGCAGCCATCATG+AGG | - | chr1.2:77558180-77558199 | MS.gene91444:CDS | 60.0% |
AGTGAACCCGGGTCGCCAAG+GGG | - | chr1.2:77558361-77558380 | MS.gene91444:CDS | 65.0% | |
TGACCAACCCCTTGGCGACC+CGG | + | chr1.2:77558371-77558390 | None:intergenic | 65.0% | |
AACCCGGGTCGCCAAGGGGT+TGG | - | chr1.2:77558365-77558384 | MS.gene91444:CDS | 70.0% | |
GACCAACCCCTTGGCGACCC+GGG | + | chr1.2:77558370-77558389 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.2 | gene | 77557846 | 77558451 | 77557846 | ID=MS.gene91444 |
chr1.2 | mRNA | 77557846 | 77558451 | 77557846 | ID=MS.gene91444.t1;Parent=MS.gene91444 |
chr1.2 | exon | 77557846 | 77558451 | 77557846 | ID=MS.gene91444.t1.exon1;Parent=MS.gene91444.t1 |
chr1.2 | CDS | 77557846 | 77558451 | 77557846 | ID=cds.MS.gene91444.t1;Parent=MS.gene91444.t1 |
Gene Sequence |
Protein sequence |