AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene050686


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene050686.t1 MTR_7g118080 97.868 516 11 0 1 516 250 765 0.0 1046
MS.gene050686.t1 MTR_8g024380 67.379 515 158 6 1 509 251 761 0.0 701
MS.gene050686.t1 MTR_1g078110 66.992 512 161 7 1 509 250 756 0.0 685
MS.gene050686.t1 MTR_8g024390 64.107 521 177 7 1 513 246 764 0.0 660
MS.gene050686.t1 MTR_2g049200 66.474 519 162 8 1 513 250 762 0.0 659
MS.gene050686.t1 MTR_8g024420 64.162 519 178 7 1 513 212 728 0.0 654
MS.gene050686.t1 MTR_8g024370 60.606 528 187 9 1 513 242 763 0.0 595
MS.gene050686.t1 MTR_7g079310 50.484 517 240 8 1 506 252 763 1.86e-170 500
MS.gene050686.t1 MTR_7g079300 50.000 516 243 8 1 506 255 765 3.55e-165 487
MS.gene050686.t1 MTR_1g079120 50.772 518 237 10 1 506 249 760 6.88e-161 476
MS.gene050686.t1 MTR_2g042130 39.848 527 281 12 1 504 257 770 7.31e-125 383
MS.gene050686.t1 MTR_4g073540 42.537 536 272 15 1 509 244 770 2.05e-123 379
MS.gene050686.t1 MTR_4g125180 41.321 530 275 14 1 507 236 752 1.83e-119 369
MS.gene050686.t1 MTR_3g102810 41.966 529 279 14 1 507 233 755 9.82e-116 359
MS.gene050686.t1 MTR_7g098630 39.439 535 281 13 1 506 240 760 4.33e-114 358
MS.gene050686.t1 MTR_4g102400 41.399 529 266 16 1 506 245 752 4.44e-114 355
MS.gene050686.t1 MTR_1g102350 38.879 535 287 12 1 509 259 779 1.17e-113 354
MS.gene050686.t1 MTR_8g022870 40.147 543 281 14 1 507 242 776 1.11e-112 352
MS.gene050686.t1 MTR_8g021130 39.962 533 275 19 1 504 256 772 2.58e-111 348
MS.gene050686.t1 MTR_7g075900 39.434 530 286 12 1 507 255 772 2.85e-111 348
MS.gene050686.t1 MTR_1g018510 39.548 531 293 11 1 507 200 726 5.86e-110 343
MS.gene050686.t1 MTR_4g095360 38.636 528 292 12 1 507 239 755 2.55e-107 337
MS.gene050686.t1 MTR_5g016120 40.454 529 282 15 1 507 244 761 1.97e-106 335
MS.gene050686.t1 MTR_5g011280 39.252 535 271 14 1 506 246 755 6.57e-105 331
MS.gene050686.t1 MTR_5g011340 41.231 536 261 16 1 506 239 750 1.90e-104 329
MS.gene050686.t1 MTR_5g011310 41.088 533 266 14 1 506 242 753 5.63e-104 328
MS.gene050686.t1 MTR_5g011190 40.901 533 267 14 1 506 242 753 2.43e-102 324
MS.gene050686.t1 MTR_5g011370 40.713 533 268 14 1 506 262 773 2.28e-101 322
MS.gene050686.t1 MTR_5g011320 40.338 533 269 15 1 506 235 745 3.34e-101 321
MS.gene050686.t1 MTR_5g096750 40.038 532 266 15 2 506 259 764 8.54e-101 320
MS.gene050686.t1 MTR_3g082200 36.654 532 299 12 2 509 117 634 9.71e-100 314
MS.gene050686.t1 MTR_3g082200 36.654 532 299 12 2 509 132 649 1.06e-99 314
MS.gene050686.t1 MTR_8g072440 36.158 531 284 13 2 506 209 710 1.41e-99 316
MS.gene050686.t1 MTR_8g072440 36.158 531 284 13 2 506 251 752 4.68e-99 315
MS.gene050686.t1 MTR_3g082200 36.654 532 299 12 2 509 255 772 1.46e-98 315
MS.gene050686.t1 MTR_5g025010 36.654 532 296 13 2 513 214 724 4.65e-98 312
MS.gene050686.t1 MTR_0047s0120 38.899 527 293 12 1 507 240 757 6.60e-98 312
MS.gene050686.t1 MTR_5g025010 36.654 532 296 13 2 513 246 756 7.81e-98 312
MS.gene050686.t1 MTR_4g134320 38.330 527 288 12 2 506 254 765 2.51e-97 311
MS.gene050686.t1 MTR_4g053630 37.879 528 287 15 2 506 143 652 2.49e-96 306
MS.gene050686.t1 MTR_5g011270 38.679 530 280 13 1 506 243 751 2.52e-96 308
MS.gene050686.t1 MTR_4g103400 38.520 527 284 15 2 500 255 769 1.21e-95 307
MS.gene050686.t1 MTR_5g011260 38.302 530 282 14 1 506 243 751 1.57e-95 306
MS.gene050686.t1 MTR_4g053630 38.491 530 281 16 2 506 220 729 1.73e-95 305
MS.gene050686.t1 MTR_7g081420 37.937 543 285 18 2 506 256 784 8.90e-95 305
MS.gene050686.t1 MTR_5g085690 37.975 553 274 17 2 506 257 788 1.01e-94 305
MS.gene050686.t1 MTR_2g018135 39.130 552 264 17 2 507 258 783 1.22e-94 305
MS.gene050686.t1 MTR_8g079900 36.433 527 291 14 3 508 142 645 1.68e-94 300
MS.gene050686.t1 MTR_2g018125 38.657 551 267 17 2 507 260 784 2.17e-94 304
MS.gene050686.t1 MTR_5g055920 36.932 528 298 13 2 506 151 666 3.00e-94 300
MS.gene050686.t1 MTR_4g103480 37.406 532 290 13 2 506 271 786 7.83e-94 302
MS.gene050686.t1 MTR_8g079900 36.433 527 291 14 3 508 240 743 1.35e-93 301
MS.gene050686.t1 MTR_7g098070 38.286 525 291 13 2 506 250 761 8.92e-93 299
MS.gene050686.t1 MTR_4g103450 37.523 533 288 15 2 506 228 743 1.59e-92 298
MS.gene050686.t1 MTR_4g103430 37.665 531 289 18 2 506 254 768 1.22e-91 296
MS.gene050686.t1 MTR_4g053635 36.723 531 286 16 2 506 166 672 2.84e-91 293
MS.gene050686.t1 MTR_4g103495 38.007 542 285 15 2 510 104 627 4.35e-91 291
MS.gene050686.t1 MTR_7g081500 36.969 541 292 17 2 506 255 782 7.60e-90 292
MS.gene050686.t1 MTR_8g033150 35.795 528 289 15 5 508 225 726 8.00e-90 290
MS.gene050686.t1 MTR_7g081580 36.643 554 290 18 2 513 256 790 1.45e-89 291
MS.gene050686.t1 MTR_8g033150 35.795 528 289 15 5 508 252 753 1.92e-89 290
MS.gene050686.t1 MTR_4g103490 37.153 541 291 15 2 506 256 783 3.35e-89 290
MS.gene050686.t1 MTR_8g083220 36.178 539 295 13 2 512 263 780 2.11e-88 288
MS.gene050686.t1 MTR_3g061110 37.817 513 274 16 21 506 258 752 3.29e-88 287
MS.gene050686.t1 MTR_7g104200 35.849 530 288 17 3 506 238 741 1.25e-87 285
MS.gene050686.t1 MTR_7g481600 35.986 553 295 17 2 513 256 790 3.40e-86 283
MS.gene050686.t1 MTR_8g042710 35.140 535 302 14 2 506 244 763 7.28e-86 281
MS.gene050686.t1 MTR_3g104930 36.147 545 288 18 2 507 239 762 1.02e-85 280
MS.gene050686.t1 MTR_8g042670 35.338 532 302 12 2 506 117 633 1.03e-85 277
MS.gene050686.t1 MTR_6g055570 35.687 524 297 15 3 509 232 732 4.06e-85 278
MS.gene050686.t1 MTR_8g042670 35.714 532 300 12 2 506 241 757 1.40e-84 277
MS.gene050686.t1 MTR_7g034380 34.286 525 299 15 3 506 192 691 1.63e-84 276
MS.gene050686.t1 MTR_3g114420 35.436 539 303 16 2 509 243 767 1.88e-83 275
MS.gene050686.t1 MTR_1g048110 35.217 531 297 15 2 511 231 735 7.65e-83 272
MS.gene050686.t1 MTR_3g464790 36.059 538 285 16 2 507 222 732 1.91e-81 268
MS.gene050686.t1 MTR_8g005710 34.280 528 303 16 3 510 199 702 4.50e-81 266
MS.gene050686.t1 MTR_1g007030 33.959 533 299 15 3 510 232 736 2.66e-80 265
MS.gene050686.t1 MTR_7g075890 34.652 531 291 16 3 506 396 897 4.25e-80 268
MS.gene050686.t1 MTR_1g006990 34.644 534 296 16 3 510 232 738 9.24e-80 264
MS.gene050686.t1 MTR_6g075370 34.400 500 260 14 3 495 237 675 1.51e-78 259
MS.gene050686.t1 MTR_4g103495 37.910 488 254 14 2 458 253 722 3.12e-76 255
MS.gene050686.t1 MTR_6g055410 33.459 529 286 15 3 510 232 715 2.99e-75 251
MS.gene050686.t1 MTR_8g006680 34.709 533 287 18 2 509 229 725 7.34e-75 251
MS.gene050686.t1 MTR_8g005300 34.709 533 287 18 2 509 229 725 7.34e-75 251
MS.gene050686.t1 MTR_8g005640 34.709 533 287 18 2 509 229 725 7.34e-75 251
MS.gene050686.t1 MTR_3g010080 34.659 528 302 13 3 510 231 735 4.19e-73 246
MS.gene050686.t1 MTR_8g027660 58.974 195 54 2 316 509 80 249 2.05e-69 223
MS.gene050686.t1 MTR_7g081750 46.341 287 142 7 223 506 520 797 3.42e-66 229
MS.gene050686.t1 MTR_7g081750 42.857 126 63 3 2 119 255 379 1.75e-22 102
MS.gene050686.t1 MTR_7g081380 43.390 295 154 8 216 506 521 806 5.51e-63 220
MS.gene050686.t1 MTR_7g081380 41.667 132 60 4 2 119 256 384 6.41e-20 94.0
MS.gene050686.t1 MTR_2g042650 32.735 501 269 15 29 506 187 642 7.56e-62 214
MS.gene050686.t1 MTR_2g044630 31.418 522 299 14 3 506 225 705 8.47e-61 213
MS.gene050686.t1 MTR_4g071560 38.551 345 188 10 2 324 178 520 2.81e-60 207
MS.gene050686.t1 MTR_3g452290 30.930 527 257 17 3 510 134 572 3.13e-60 208
MS.gene050686.t1 MTR_3g451220 30.930 527 257 17 3 510 134 572 3.13e-60 208
MS.gene050686.t1 MTR_2g037850 33.006 509 263 21 1 448 267 758 3.73e-59 209
MS.gene050686.t1 MTR_8g027260 38.141 312 172 7 204 510 360 655 3.14e-56 199
MS.gene050686.t1 MTR_8g027260 40.909 110 63 2 3 110 231 340 6.49e-18 87.4
MS.gene050686.t1 MTR_4g132620 30.279 502 281 13 1 446 267 755 3.36e-55 198
MS.gene050686.t1 MTR_5g044060 64.964 137 47 1 219 355 1 136 1.31e-54 182
MS.gene050686.t1 MTR_8g089230 30.303 528 297 18 1 470 296 810 2.47e-54 196
MS.gene050686.t1 MTR_2g046740 28.733 529 305 14 1 470 288 803 3.72e-51 187
MS.gene050686.t1 MTR_3g114410 36.467 351 180 11 2 323 244 580 1.17e-48 177
MS.gene050686.t1 MTR_8g042710 33.621 348 198 9 2 323 244 584 4.53e-46 171
MS.gene050686.t1 MTR_2g042640 31.185 481 247 15 3 469 201 611 3.33e-45 168
MS.gene050686.t1 MTR_4g127480 40.773 233 114 6 229 448 537 758 2.22e-38 150
MS.gene050686.t1 MTR_4g127480 39.683 126 70 2 1 120 267 392 5.11e-21 97.4
MS.gene050686.t1 MTR_7g079295 49.333 150 71 2 359 506 363 509 9.56e-36 140
MS.gene050686.t1 MTR_7g079295 63.303 109 39 1 1 109 255 362 1.35e-32 130
MS.gene050686.t1 MTR_3g114140 37.736 265 145 9 209 465 169 421 1.82e-35 137
MS.gene050686.t1 MTR_3g114140 45.745 94 48 1 20 110 57 150 1.17e-15 79.3
MS.gene050686.t1 MTR_4g126230 39.234 209 108 7 231 435 55 248 4.00e-34 129
MS.gene050686.t1 MTR_2g070260 38.462 208 106 6 292 493 1 192 5.07e-31 120
MS.gene050686.t1 MTR_4g053665 31.128 257 130 4 250 506 1 210 1.15e-29 116
MS.gene050686.t1 MTR_5g081130 37.349 166 96 4 344 506 12 172 1.72e-26 107
MS.gene050686.t1 MTR_7g081660 38.542 192 100 8 328 513 380 559 2.69e-22 100
MS.gene050686.t1 MTR_3g114160 41.333 150 73 5 2 141 137 281 4.71e-22 98.2
MS.gene050686.t1 MTR_5g081100 28.958 259 162 6 3 251 180 426 1.21e-20 94.7
MS.gene050686.t1 MTR_5g011300 47.917 96 48 1 292 387 1 94 7.19e-18 79.3
MS.gene050686.t1 MTR_5g081280 41.346 104 59 1 2 103 196 299 9.65e-18 84.3
MS.gene050686.t1 MTR_3g114400 32.240 183 92 7 333 507 5 163 9.47e-15 72.4
MS.gene050686.t1 MTR_8g027670 58.025 81 33 1 380 460 33 112 6.24e-14 68.6
MS.gene050686.t1 MTR_2g070250 27.419 248 161 8 3 247 175 406 1.33e-13 73.2
MS.gene050686.t1 MTR_4g118440 30.570 193 115 7 311 495 17 198 6.91e-12 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene050686.t1 AT5G67090 44.129 528 253 11 1 512 234 735 1.96e-140 422
MS.gene050686.t1 AT2G05920 40.684 526 281 12 1 507 237 750 9.94e-123 377
MS.gene050686.t1 AT1G04110 41.078 538 269 14 1 507 251 771 2.17e-122 377
MS.gene050686.t1 AT3G14240 39.518 539 287 14 1 507 239 770 1.62e-117 364
MS.gene050686.t1 AT5G67360 40.832 529 277 14 1 507 241 755 3.08e-117 363
MS.gene050686.t1 AT4G34980 40.335 538 286 16 1 511 234 763 7.91e-115 357
MS.gene050686.t1 AT5G51750 38.606 531 295 12 1 509 256 777 5.88e-110 345
MS.gene050686.t1 AT1G01900 39.695 524 286 12 5 507 258 772 8.06e-105 331
MS.gene050686.t1 AT2G04160 39.444 540 270 16 2 506 253 770 1.71e-102 325
MS.gene050686.t1 AT3G14067 36.636 535 297 17 1 506 246 767 1.83e-101 322
MS.gene050686.t1 AT1G20160 37.569 543 288 18 4 512 203 728 1.35e-96 308
MS.gene050686.t1 AT1G20160 37.569 543 288 18 4 512 242 767 2.88e-96 308
MS.gene050686.t1 AT5G59810 36.932 528 297 11 2 506 260 774 8.76e-93 300
MS.gene050686.t1 AT5G45650 37.477 547 278 18 2 507 266 789 4.39e-91 295
MS.gene050686.t1 AT5G45650 37.477 547 278 18 2 507 266 789 4.39e-91 295
MS.gene050686.t1 AT1G32970 39.179 536 273 19 2 506 209 722 2.12e-90 292
MS.gene050686.t1 AT1G20150 35.390 551 289 15 2 508 245 772 4.23e-89 290
MS.gene050686.t1 AT5G03620 36.754 536 289 12 3 506 241 758 6.40e-88 286
MS.gene050686.t1 AT4G10510 35.912 543 296 15 2 515 181 700 5.36e-87 283
MS.gene050686.t1 AT4G10510 35.912 543 296 15 2 515 196 715 7.60e-87 282
MS.gene050686.t1 AT5G59100 34.151 530 304 14 3 510 235 741 9.83e-87 283
MS.gene050686.t1 AT4G10510 35.912 543 296 15 2 515 240 759 1.96e-86 282
MS.gene050686.t1 AT4G10510 35.912 543 296 15 2 515 252 771 2.53e-86 282
MS.gene050686.t1 AT4G10550 36.381 536 289 15 2 506 196 710 2.40e-85 278
MS.gene050686.t1 AT4G10550 36.381 536 289 15 2 506 196 710 2.40e-85 278
MS.gene050686.t1 AT4G10550 36.381 536 289 15 2 506 252 766 7.92e-85 278
MS.gene050686.t1 AT4G10550 36.381 536 289 15 2 506 268 782 1.19e-84 278
MS.gene050686.t1 AT3G46850 36.122 526 288 16 3 506 235 734 1.41e-84 277
MS.gene050686.t1 AT3G46840 35.502 538 282 16 3 510 236 738 1.32e-83 274
MS.gene050686.t1 AT4G00230 34.637 537 296 14 3 512 241 749 3.83e-83 273
MS.gene050686.t1 AT1G32940 36.330 534 293 14 2 506 196 711 3.90e-83 273
MS.gene050686.t1 AT1G32940 36.330 534 293 14 2 506 196 711 3.90e-83 273
MS.gene050686.t1 AT4G10520 35.465 516 303 12 2 506 248 744 5.12e-83 273
MS.gene050686.t1 AT5G59090 33.905 525 297 12 3 506 228 723 1.22e-82 271
MS.gene050686.t1 AT1G32940 36.330 534 293 14 2 506 247 762 1.82e-82 272
MS.gene050686.t1 AT5G59090 33.714 525 303 11 3 506 226 726 2.48e-82 271
MS.gene050686.t1 AT5G59090 33.714 525 303 11 3 506 228 728 2.98e-82 271
MS.gene050686.t1 AT4G10540 34.508 539 296 13 2 506 248 763 3.92e-82 271
MS.gene050686.t1 AT5G58830 36.078 510 287 15 3 506 229 705 5.97e-82 269
MS.gene050686.t1 AT5G11940 34.875 519 302 13 2 506 256 752 6.86e-82 270
MS.gene050686.t1 AT1G32960 36.330 534 293 15 2 506 250 765 1.06e-81 270
MS.gene050686.t1 AT5G59190 35.768 534 285 17 3 510 191 692 1.84e-81 268
MS.gene050686.t1 AT4G26330 35.038 528 309 14 2 506 205 721 6.59e-81 267
MS.gene050686.t1 AT4G26330 35.038 528 309 14 2 506 219 735 8.18e-81 267
MS.gene050686.t1 AT1G66220 33.784 518 300 10 2 506 257 744 1.02e-80 267
MS.gene050686.t1 AT1G66210 36.346 520 288 14 2 506 259 750 1.30e-80 267
MS.gene050686.t1 AT5G59120 33.895 534 290 15 3 506 227 727 3.28e-80 265
MS.gene050686.t1 AT5G58840 35.225 511 289 13 3 506 231 706 3.40e-80 265
MS.gene050686.t1 AT4G21326 35.509 521 293 11 2 506 194 687 2.81e-78 259
MS.gene050686.t1 AT1G32950 35.084 533 301 14 2 506 195 710 4.24e-78 259
MS.gene050686.t1 AT5G59130 34.659 528 288 19 3 506 192 686 1.16e-77 258
MS.gene050686.t1 AT1G32950 35.084 533 301 14 2 506 246 761 1.73e-77 259
MS.gene050686.t1 AT5G59130 35.038 528 286 20 3 506 227 721 2.36e-77 258
MS.gene050686.t1 AT5G59130 34.659 528 288 19 3 506 231 725 2.62e-77 258
MS.gene050686.t1 AT5G59130 34.915 527 278 20 3 506 231 715 8.77e-76 253
MS.gene050686.t1 AT5G45640 35.065 539 295 17 5 507 233 752 1.58e-74 250
MS.gene050686.t1 AT4G21323 35.590 517 294 13 2 504 300 791 2.35e-74 251
MS.gene050686.t1 AT5G58820 35.029 511 290 17 3 506 225 700 8.10e-74 248
MS.gene050686.t1 AT4G21650 35.824 522 288 16 2 506 269 760 3.80e-73 247
MS.gene050686.t1 AT4G21630 35.078 516 295 13 2 506 267 753 5.33e-73 246
MS.gene050686.t1 AT4G15040 33.145 531 293 13 3 506 190 685 2.37e-72 243
MS.gene050686.t1 AT4G15040 33.145 531 293 13 3 506 190 685 2.37e-72 243
MS.gene050686.t1 AT4G10530 32.890 526 294 17 2 506 248 735 1.97e-71 242
MS.gene050686.t1 AT4G21640 34.825 514 269 14 2 506 271 727 4.97e-67 230
MS.gene050686.t1 AT4G30020 33.529 510 246 17 1 442 264 748 3.79e-63 221
MS.gene050686.t1 AT4G30020 33.529 510 246 17 1 442 264 748 3.79e-63 221
MS.gene050686.t1 AT4G30020 33.529 510 246 17 1 442 264 748 3.79e-63 221
MS.gene050686.t1 AT4G30020 33.529 510 246 17 1 442 264 748 3.79e-63 221
MS.gene050686.t1 AT2G39850 32.570 568 296 23 3 509 227 768 7.76e-63 219
MS.gene050686.t1 AT4G20430 30.254 552 316 16 1 507 298 825 9.36e-59 209
MS.gene050686.t1 AT4G20430 28.621 573 322 17 1 507 298 849 2.67e-57 205
MS.gene050686.t1 AT4G20430 28.621 573 322 17 1 507 298 849 2.67e-57 205
MS.gene050686.t1 AT5G03620 37.830 341 190 5 3 325 241 577 2.67e-57 200
MS.gene050686.t1 AT5G44530 30.402 523 285 16 1 461 284 789 7.04e-57 203
MS.gene050686.t1 AT1G30600 30.726 537 284 20 1 470 276 791 1.65e-56 202
MS.gene050686.t1 AT1G62340 29.174 569 326 20 1 509 281 832 5.11e-54 195
MS.gene050686.t1 AT5G44530 29.197 548 284 17 1 461 284 814 5.85e-53 192
MS.gene050686.t1 AT4G00230 35.854 357 188 10 3 337 241 578 3.93e-50 181
MS.gene050686.t1 AT5G58840 36.111 324 181 7 3 323 231 531 7.37e-50 179
MS.gene050686.t1 AT1G32940 36.134 357 192 10 2 332 247 593 8.23e-47 172
MS.gene050686.t1 AT1G32980 46.354 192 92 5 288 476 3 186 8.83e-41 145
MS.gene050686.t1 AT2G19170 41.667 228 106 8 229 442 533 747 2.36e-37 147
MS.gene050686.t1 AT2G19170 41.270 126 68 2 1 120 263 388 3.01e-22 101
MS.gene050686.t1 AT2G19170 41.667 228 106 8 229 442 533 747 2.36e-37 147
MS.gene050686.t1 AT2G19170 41.270 126 68 2 1 120 263 388 3.01e-22 101
MS.gene050686.t1 AT1G20160 34.191 272 150 8 4 251 242 508 4.29e-31 127
MS.gene050686.t1 AT5G44530 28.616 318 170 10 1 265 284 597 1.83e-25 110
MS.gene050686.t1 AT5G58840 30.279 251 152 5 3 251 231 460 7.77e-23 102
MS.gene050686.t1 AT5G59110 36.196 163 94 5 350 506 8 166 2.49e-22 94.4

Find 114 sgRNAs with CRISPR-Local

Find 135 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGATTTAATACTAGCATTAT+TGG 0.130327 7.4:+517021 None:intergenic
GCCAAACAAGTTGGTGTTTA+AGG 0.131184 7.4:-516891 MS.gene050686:CDS
TTGATAAGTTCTCCATTAAT+TGG 0.165231 7.4:+517667 None:intergenic
CAATTGTTCTAACCCTTCTT+TGG 0.224091 7.4:-517074 MS.gene050686:CDS
TTAAATGTCATGCTTGCTTT+TGG 0.275200 7.4:+517619 None:intergenic
ACATTGATGTTCCACTTAAC+AGG 0.292079 7.4:+517407 None:intergenic
TGGTATTGCAGCTCTGTTGC+TGG 0.293194 7.4:+517454 None:intergenic
CCAGCTTCGCCTTTAGCTTT+GGG 0.300154 7.4:-517235 MS.gene050686:CDS
ACCAGCTTCGCCTTTAGCTT+TGG 0.303663 7.4:-517236 MS.gene050686:CDS
TCCTTAAACACCAACTTGTT+TGG 0.318323 7.4:+516890 None:intergenic
TCCAGGATCAAGTGCTCTAT+TGG 0.325840 7.4:+517195 None:intergenic
AGATGTTCTTTCATTATCAT+TGG 0.329610 7.4:-518317 MS.gene050686:CDS
CACTGGTTTGTCTCTCTATC+CGG 0.333243 7.4:-517923 MS.gene050686:CDS
TAAAAGAAATGCACCCTTGT+TGG 0.342036 7.4:-517351 MS.gene050686:CDS
GATGTTCTTTCATTATCATT+GGG 0.385405 7.4:-518316 MS.gene050686:CDS
GTTCCTGGTGCTGTGATGTC+TGG 0.386277 7.4:+517508 None:intergenic
CAATAAAAGAAGGGTAATTA+AGG 0.394074 7.4:+517050 None:intergenic
ATGTCATGTCCACACGTTGC+AGG 0.412553 7.4:-517388 MS.gene050686:CDS
AGCAACTTCAACCTGTTAAG+TGG 0.414233 7.4:-517418 MS.gene050686:CDS
AATACTAGCATTATTGGAAA+AGG 0.414600 7.4:+517027 None:intergenic
GAACACTAATCTTAGCTTCA+TGG 0.418136 7.4:-517489 MS.gene050686:CDS
GAGGATAGAAGGTCCCAAAA+TGG 0.422910 7.4:-516840 MS.gene050686:CDS
GCAAATGTGGCTATAGCTAC+AGG 0.424372 7.4:+518265 None:intergenic
GAAGCTAAGATTAGTGTTCC+TGG 0.427932 7.4:+517493 None:intergenic
CCCAATAGAGCACTTGATCC+TGG 0.431139 7.4:-517196 MS.gene050686:CDS
TGTCATCATAGCCGATCTAA+TGG 0.431933 7.4:+517318 None:intergenic
TTTCATGGGGATTTAACACT+TGG 0.438899 7.4:-517961 MS.gene050686:CDS
GGGGATTTAACACTTGGAAA+TGG 0.440284 7.4:-517955 MS.gene050686:CDS
GCATACAAGTTGAGGATAGA+AGG 0.441589 7.4:-516851 MS.gene050686:CDS
CTAACATGGAACCCTTCAAT+AGG 0.445506 7.4:+516920 None:intergenic
GACAGAATAAAAGTTGTTGC+GGG 0.452947 7.4:-517763 MS.gene050686:CDS
CCAGGATCAAGTGCTCTATT+GGG 0.455478 7.4:+517196 None:intergenic
TCGCCTTTAGCTTTGGGAGC+CGG 0.456562 7.4:-517229 MS.gene050686:CDS
TTTCCACAACACCTTGTACA+TGG 0.458364 7.4:+518399 None:intergenic
TCAAATTATCACATGAGCTC+AGG 0.458858 7.4:+517866 None:intergenic
TGCTACTCAAGTGGATAACT+TGG 0.465885 7.4:-517785 MS.gene050686:CDS
TTGGAAAAGGCAATAAAAGA+AGG 0.472023 7.4:+517040 None:intergenic
ATAGCCGATCTAATGGCTGC+TGG 0.472411 7.4:+517325 None:intergenic
GAGAGACAAACCAGTGACTT+TGG 0.475671 7.4:+517930 None:intergenic
CCCAAAGCTAAAGGCGAAGC+TGG 0.477490 7.4:+517235 None:intergenic
CAAAGAACAGTAACCAATGT+TGG 0.481002 7.4:-516977 MS.gene050686:CDS
CCTGGACTTGTTTATGATGC+AGG 0.481037 7.4:-517178 MS.gene050686:CDS
ACTGGTTTGTCTCTCTATCC+GGG 0.481363 7.4:-517922 MS.gene050686:CDS
ACAATGGATCGTGAATTTCA+TGG 0.481858 7.4:-517976 MS.gene050686:CDS
CCACTTGAGTAGCAAGTGTT+CGG 0.482540 7.4:+517794 None:intergenic
ATGTCTGGTTTCAATACAAA+TGG 0.482788 7.4:+517523 None:intergenic
TAACTATCCACACTTGGTGC+TGG 0.482946 7.4:+517574 None:intergenic
TACAAGGTGTTGTGGAAAGA+AGG 0.492211 7.4:-518394 MS.gene050686:CDS
AGTTGCTGAAGAGACTGTTC+TGG 0.493083 7.4:+517434 None:intergenic
TTTCTCCATGGCTGCAAATG+TGG 0.496242 7.4:+518252 None:intergenic
TGTTGGTTCCTCTCCAACAT+TGG 0.501053 7.4:+516964 None:intergenic
GGAAATGGAGCCAAAGTCAC+TGG 0.504040 7.4:-517940 MS.gene050686:CDS
AATTAATGGAGAACTTATCA+AGG 0.504175 7.4:-517665 MS.gene050686:CDS
TTGTGGAGAGTTTCAAGCAC+TGG 0.505059 7.4:+518193 None:intergenic
GCCAACATTACACCTATTGA+AGG 0.506828 7.4:-516932 MS.gene050686:CDS
CAATGGATCGTGAATTTCAT+GGG 0.508806 7.4:-517975 MS.gene050686:CDS
CCTGCATCATAAACAAGTCC+AGG 0.510762 7.4:+517178 None:intergenic
GGGTAATTAAGGTCCAAAGA+AGG 0.511365 7.4:+517061 None:intergenic
CCCTTCAATAGGTGTAATGT+TGG 0.512122 7.4:+516931 None:intergenic
TTGAGGCTAGTCACCACAAT+GGG 0.512323 7.4:+516755 None:intergenic
ATGTTGGCTACGTAGATTGT+TGG 0.524040 7.4:+516947 None:intergenic
TTCTTCAGGCAAGGTCCCAA+TGG 0.539934 7.4:-517893 MS.gene050686:CDS
ATGGCTGCTGGGCTCCAACA+AGG 0.540754 7.4:+517337 None:intergenic
CTCATCACAGACATTGGTAA+TGG 0.546640 7.4:-517265 MS.gene050686:CDS
TATAGCCACATTTGCAGCCA+TGG 0.551323 7.4:-518257 MS.gene050686:CDS
AAAAGGTGGCATACAAGTTG+AGG 0.554078 7.4:-516859 MS.gene050686:CDS
CCGAACACTTGCTACTCAAG+TGG 0.554379 7.4:-517794 MS.gene050686:CDS
AAACCAGACATCACAGCACC+AGG 0.556877 7.4:-517511 MS.gene050686:CDS
TGGCTGCTGGGCTCCAACAA+GGG 0.558849 7.4:+517338 None:intergenic
TAATGCTAGTATTAAATCAA+AGG 0.561729 7.4:-517017 MS.gene050686:CDS
ATGAGCTCAGGAAAACCATT+GGG 0.563597 7.4:+517878 None:intergenic
TGGAAAAGGCAATAAAAGAA+GGG 0.565522 7.4:+517041 None:intergenic
TCTATTGGGATTGATATGTC+CGG 0.566787 7.4:+517210 None:intergenic
GGACAGAATAAAAGTTGTTG+CGG 0.568482 7.4:-517764 MS.gene050686:CDS
TTGCCTGAAGAAAAGTTCCC+CGG 0.569584 7.4:+517904 None:intergenic
GGTAATTAAGGTCCAAAGAA+GGG 0.570305 7.4:+517062 None:intergenic
GTGGATAGTTATAGCTCAAG+AGG 0.570426 7.4:-517562 MS.gene050686:CDS
CATGAGCTCAGGAAAACCAT+TGG 0.572333 7.4:+517877 None:intergenic
TAGCCGATCTAATGGCTGCT+GGG 0.573964 7.4:+517326 None:intergenic
TAGGTAATAACAGTTGCTGC+TGG 0.574960 7.4:-518000 MS.gene050686:CDS
AAAGAACTCATCACAGACAT+TGG 0.579567 7.4:-517271 MS.gene050686:CDS
TACAAAACCAGCACCAAGTG+TGG 0.583888 7.4:-517581 MS.gene050686:CDS
TGTTTGGCACAACACTAACA+TGG 0.585342 7.4:+516906 None:intergenic
TTACCCATGGTGTTCCATTG+TGG 0.588428 7.4:+518176 None:intergenic
TGCTCATGTATCCATGTACA+AGG 0.589509 7.4:-518410 MS.gene050686:CDS
TGTCCGGCTCCCAAAGCTAA+AGG 0.592001 7.4:+517226 None:intergenic
TTTCATATCAAATAGTTCTG+AGG 0.593073 7.4:-517737 MS.gene050686:CDS
GAGCCCAGCAGCCATTAGAT+CGG 0.599696 7.4:-517329 MS.gene050686:CDS
AACAGTTGCTGCTGGCACAA+TGG 0.600200 7.4:-517992 MS.gene050686:CDS
AACAGTAACCAATGTTGGAG+AGG 0.601299 7.4:-516972 MS.gene050686:CDS
TATCCATGTACAAGGTGTTG+TGG 0.603560 7.4:-518402 MS.gene050686:CDS
GAGCTATAACTATCCACACT+TGG 0.608978 7.4:+517568 None:intergenic
ACAAATGGACAACTATGTGA+TGG 0.610446 7.4:+517538 None:intergenic
GTTAAAAGATGATCTCGTGA+TGG 0.616429 7.4:+517096 None:intergenic
CCAACATTACACCTATTGAA+GGG 0.618531 7.4:-516931 MS.gene050686:CDS
CAAATGTGGCTATAGCTACA+GGG 0.628730 7.4:+518266 None:intergenic
CTGGTTTGTCTCTCTATCCG+GGG 0.630663 7.4:-517921 MS.gene050686:CDS
TCTCCACAATGGAACACCAT+GGG 0.638196 7.4:-518179 MS.gene050686:intron
GCTACAGGGTCTTCATACAA+AGG 0.645706 7.4:+518280 None:intergenic
CAATGTTAGAAGTCCCATTG+TGG 0.651731 7.4:-516768 MS.gene050686:CDS
TAGTGTTGTGCCAAACAAGT+TGG 0.651815 7.4:-516900 MS.gene050686:CDS
GCTGCTACACCTGCAACGTG+TGG 0.653610 7.4:+517379 None:intergenic
TCTACATCTGCAGGGAACAG+AGG 0.655917 7.4:-518217 MS.gene050686:CDS
GAAACACTTTAAGCTCTATG+GGG 0.658815 7.4:+516718 None:intergenic
GTGCTTGAAACTCTCCACAA+TGG 0.662351 7.4:-518190 MS.gene050686:CDS
AATGGATCGTGAATTTCATG+GGG 0.664232 7.4:-517974 MS.gene050686:CDS
ATTGATAGTGCAATATCAGA+TGG 0.667169 7.4:-518343 MS.gene050686:CDS
GGGGTGTTAATTCTGAGTTG+AGG 0.668165 7.4:+516738 None:intergenic
CTTCACTCAGAAGAATATCA+CGG 0.668501 7.4:-517119 MS.gene050686:CDS
AAACACTTTAAGCTCTATGG+GGG 0.675132 7.4:+516719 None:intergenic
TACATGGATACATGAGCATG+TGG 0.676320 7.4:+518415 None:intergenic
CTCTCCACAATGGAACACCA+TGG 0.677964 7.4:-518180 MS.gene050686:CDS
CAGAGCGAGAAACAAGATCG+TGG 0.709086 7.4:-517833 MS.gene050686:CDS
GTTGAGGCTAGTCACCACAA+TGG 0.709647 7.4:+516754 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ACATTTAATAAAACTGTTTT+AGG - chr7.4:517550-517569 MS.gene050686:CDS 15.0%
!!! ATTTTTTTGAATCCAATTAA+TGG - chr7.4:517475-517494 MS.gene050686:CDS 15.0%
!! ATTGGATTCAAAAAAATAGA+TGG + chr7.4:517472-517491 None:intergenic 20.0%
!! GTTTATACATAAGAAATGAT+TGG - chr7.4:517071-517090 MS.gene050686:CDS 20.0%
!! TAATGCTAGTATTAAATCAA+AGG - chr7.4:518137-518156 MS.gene050686:intron 20.0%
!! TATTACCTATTAGTGATAAA+GGG + chr7.4:517143-517162 None:intergenic 20.0%
!! TGATTTAATACTAGCATTAT+TGG + chr7.4:518136-518155 None:intergenic 20.0%
!! TTATTACCTATTAGTGATAA+AGG + chr7.4:517144-517163 None:intergenic 20.0%
!!! AGCAAAATAAAGTAGTTTTT+GGG - chr7.4:518337-518356 MS.gene050686:CDS 20.0%
! AATACTAGCATTATTGGAAA+AGG + chr7.4:518130-518149 None:intergenic 25.0%
! AATTAATGGAGAACTTATCA+AGG - chr7.4:517489-517508 MS.gene050686:CDS 25.0%
! AGATGTTCTTTCATTATCAT+TGG - chr7.4:516837-516856 MS.gene050686:CDS 25.0%
! CAATAAAAGAAGGGTAATTA+AGG + chr7.4:518107-518126 None:intergenic 25.0%
! GATGTTCTTTCATTATCATT+GGG - chr7.4:516838-516857 MS.gene050686:CDS 25.0%
! GTTTAAGGAGAAAAATGAAA+AGG - chr7.4:518278-518297 MS.gene050686:CDS 25.0%
! TTGATAAGTTCTCCATTAAT+TGG + chr7.4:517490-517509 None:intergenic 25.0%
!! GAGCAAAATAAAGTAGTTTT+TGG - chr7.4:518336-518355 MS.gene050686:CDS 25.0%
!! TTTCATATCAAATAGTTCTG+AGG - chr7.4:517417-517436 MS.gene050686:CDS 25.0%
!!! ACTTTATTTTGCTCCATTTT+GGG + chr7.4:518330-518349 None:intergenic 25.0%
!!! TACTTTATTTTGCTCCATTT+TGG + chr7.4:518331-518350 None:intergenic 25.0%
CTATCTACTTCACTTTCATA+TGG + chr7.4:517098-517117 None:intergenic 30.0%
TAAGGAGAAAAATGAAAAGG+TGG - chr7.4:518281-518300 MS.gene050686:CDS 30.0%
TGGAAAAGGCAATAAAAGAA+GGG + chr7.4:518116-518135 None:intergenic 30.0%
TTGGAAAAGGCAATAAAAGA+AGG + chr7.4:518117-518136 None:intergenic 30.0%
! ATGTCTGGTTTCAATACAAA+TGG + chr7.4:517634-517653 None:intergenic 30.0%
! CACAAAAATGTTTTTCTCCA+TGG + chr7.4:516917-516936 None:intergenic 30.0%
! TTAAATGTCATGCTTGCTTT+TGG + chr7.4:517538-517557 None:intergenic 30.0%
!! ATTGATAGTGCAATATCAGA+TGG - chr7.4:516811-516830 MS.gene050686:CDS 30.0%
AAAGAACTCATCACAGACAT+TGG - chr7.4:517883-517902 MS.gene050686:CDS 35.0%
AATGGATCGTGAATTTCATG+GGG - chr7.4:517180-517199 MS.gene050686:CDS 35.0%
ACAAATGGACAACTATGTGA+TGG + chr7.4:517619-517638 None:intergenic 35.0%
ACAATGGATCGTGAATTTCA+TGG - chr7.4:517178-517197 MS.gene050686:CDS 35.0%
ACATTGATGTTCCACTTAAC+AGG + chr7.4:517750-517769 None:intergenic 35.0%
ACTCACCCTTTATCACTAAT+AGG - chr7.4:517135-517154 MS.gene050686:CDS 35.0%
CAAAGAACAGTAACCAATGT+TGG - chr7.4:518177-518196 MS.gene050686:intron 35.0%
CAATGGATCGTGAATTTCAT+GGG - chr7.4:517179-517198 MS.gene050686:CDS 35.0%
CAATTGTTCTAACCCTTCTT+TGG - chr7.4:518080-518099 MS.gene050686:intron 35.0%
CCAACATTACACCTATTGAA+GGG - chr7.4:518223-518242 MS.gene050686:CDS 35.0%
CTTCACTCAGAAGAATATCA+CGG - chr7.4:518035-518054 MS.gene050686:intron 35.0%
GAACACTAATCTTAGCTTCA+TGG - chr7.4:517665-517684 MS.gene050686:CDS 35.0%
GACAGAATAAAAGTTGTTGC+GGG - chr7.4:517391-517410 MS.gene050686:CDS 35.0%
GCAGTAAGTAATATTACCCA+TGG + chr7.4:516994-517013 None:intergenic 35.0%
GGACAGAATAAAAGTTGTTG+CGG - chr7.4:517390-517409 MS.gene050686:CDS 35.0%
GGTAATTAAGGTCCAAAGAA+GGG + chr7.4:518095-518114 None:intergenic 35.0%
GTTAAAAGATGATCTCGTGA+TGG + chr7.4:518061-518080 None:intergenic 35.0%
TAAAAGAAATGCACCCTTGT+TGG - chr7.4:517803-517822 MS.gene050686:CDS 35.0%
TCAAATTATCACATGAGCTC+AGG + chr7.4:517291-517310 None:intergenic 35.0%
TCTATTGGGATTGATATGTC+CGG + chr7.4:517947-517966 None:intergenic 35.0%
TTTCATGGGGATTTAACACT+TGG - chr7.4:517193-517212 MS.gene050686:CDS 35.0%
! ATTTTTGTGTCTACATCTGC+AGG - chr7.4:516928-516947 MS.gene050686:CDS 35.0%
! TCCTTAAACACCAACTTGTT+TGG + chr7.4:518267-518286 None:intergenic 35.0%
! TTTTTGTGTCTACATCTGCA+GGG - chr7.4:516929-516948 MS.gene050686:CDS 35.0%
!! ATTATCATTGGGTTTTGACG+AGG - chr7.4:516849-516868 MS.gene050686:CDS 35.0%
!!! TAGTTTTTGGGTATCTCACT+TGG - chr7.4:518349-518368 MS.gene050686:CDS 35.0%
AAAAGGTGGCATACAAGTTG+AGG - chr7.4:518295-518314 MS.gene050686:CDS 40.0%
AACAGTAACCAATGTTGGAG+AGG - chr7.4:518182-518201 MS.gene050686:CDS 40.0%
AGCAACTTCAACCTGTTAAG+TGG - chr7.4:517736-517755 MS.gene050686:CDS 40.0%
ATGAGCTCAGGAAAACCATT+GGG + chr7.4:517279-517298 None:intergenic 40.0%
CAAATGTGGCTATAGCTACA+GGG + chr7.4:516891-516910 None:intergenic 40.0%
CAATGTTAGAAGTCCCATTG+TGG - chr7.4:518386-518405 MS.gene050686:CDS 40.0%
CCCTTCAATAGGTGTAATGT+TGG + chr7.4:518226-518245 None:intergenic 40.0%
CTAACATGGAACCCTTCAAT+AGG + chr7.4:518237-518256 None:intergenic 40.0%
CTCATCACAGACATTGGTAA+TGG - chr7.4:517889-517908 MS.gene050686:CDS 40.0%
GAAGCTAAGATTAGTGTTCC+TGG + chr7.4:517664-517683 None:intergenic 40.0%
GAGCTATAACTATCCACACT+TGG + chr7.4:517589-517608 None:intergenic 40.0%
GCCAACATTACACCTATTGA+AGG - chr7.4:518222-518241 MS.gene050686:CDS 40.0%
GGGGATTTAACACTTGGAAA+TGG - chr7.4:517199-517218 MS.gene050686:CDS 40.0%
GGGTAATTAAGGTCCAAAGA+AGG + chr7.4:518096-518115 None:intergenic 40.0%
GTGGATAGTTATAGCTCAAG+AGG - chr7.4:517592-517611 MS.gene050686:CDS 40.0%
TACATGGATACATGAGCATG+TGG + chr7.4:516742-516761 None:intergenic 40.0%
TAGGTAATAACAGTTGCTGC+TGG - chr7.4:517154-517173 MS.gene050686:CDS 40.0%
TAGTGTTGTGCCAAACAAGT+TGG - chr7.4:518254-518273 MS.gene050686:CDS 40.0%
TGCTACTCAAGTGGATAACT+TGG - chr7.4:517369-517388 MS.gene050686:CDS 40.0%
TGCTCATGTATCCATGTACA+AGG - chr7.4:516744-516763 MS.gene050686:CDS 40.0%
TGTCATCATAGCCGATCTAA+TGG + chr7.4:517839-517858 None:intergenic 40.0%
TGTTTGGCACAACACTAACA+TGG + chr7.4:518251-518270 None:intergenic 40.0%
TTTCCACAACACCTTGTACA+TGG + chr7.4:516758-516777 None:intergenic 40.0%
! ATGTTGGCTACGTAGATTGT+TGG + chr7.4:518210-518229 None:intergenic 40.0%
! GCATACAAGTTGAGGATAGA+AGG - chr7.4:518303-518322 MS.gene050686:CDS 40.0%
! TCTGTTGCTGGAACATTTTG+AGG + chr7.4:517691-517710 None:intergenic 40.0%
!! GCCAAACAAGTTGGTGTTTA+AGG - chr7.4:518263-518282 MS.gene050686:CDS 40.0%
!! TACAAGGTGTTGTGGAAAGA+AGG - chr7.4:516760-516779 MS.gene050686:CDS 40.0%
!! TATCCATGTACAAGGTGTTG+TGG - chr7.4:516752-516771 MS.gene050686:CDS 40.0%
AGTTGCTGAAGAGACTGTTC+TGG + chr7.4:517723-517742 None:intergenic 45.0%
CATGAGCTCAGGAAAACCAT+TGG + chr7.4:517280-517299 None:intergenic 45.0%
CCACTTGAGTAGCAAGTGTT+CGG + chr7.4:517363-517382 None:intergenic 45.0%
CCAGGATCAAGTGCTCTATT+GGG + chr7.4:517961-517980 None:intergenic 45.0%
CCTGCATCATAAACAAGTCC+AGG + chr7.4:517979-517998 None:intergenic 45.0%
GAGAGACAAACCAGTGACTT+TGG + chr7.4:517227-517246 None:intergenic 45.0%
GAGGATAGAAGGTCCCAAAA+TGG - chr7.4:518314-518333 MS.gene050686:CDS 45.0%
GCAAATGTGGCTATAGCTAC+AGG + chr7.4:516892-516911 None:intergenic 45.0%
GCTACAGGGTCTTCATACAA+AGG + chr7.4:516877-516896 None:intergenic 45.0%
GTGCTTGAAACTCTCCACAA+TGG - chr7.4:516964-516983 MS.gene050686:CDS 45.0%
TACAAAACCAGCACCAAGTG+TGG - chr7.4:517573-517592 MS.gene050686:CDS 45.0%
TATAGCCACATTTGCAGCCA+TGG - chr7.4:516897-516916 MS.gene050686:CDS 45.0%
TCCAGGATCAAGTGCTCTAT+TGG + chr7.4:517962-517981 None:intergenic 45.0%
TCTCCACAATGGAACACCAT+GGG - chr7.4:516975-516994 MS.gene050686:CDS 45.0%
TTACCCATGGTGTTCCATTG+TGG + chr7.4:516981-517000 None:intergenic 45.0%
TTGCCTGAAGAAAAGTTCCC+CGG + chr7.4:517253-517272 None:intergenic 45.0%
TTGTGGAGAGTTTCAAGCAC+TGG + chr7.4:516964-516983 None:intergenic 45.0%
TTTCTCCATGGCTGCAAATG+TGG + chr7.4:516905-516924 None:intergenic 45.0%
! CCTGGACTTGTTTATGATGC+AGG - chr7.4:517976-517995 MS.gene050686:CDS 45.0%
! GGGGTGTTAATTCTGAGTTG+AGG + chr7.4:518419-518438 None:intergenic 45.0%
! TATCCGGGGAACTTTTCTTC+AGG - chr7.4:517247-517266 MS.gene050686:CDS 45.0%
! TTGAGGCTAGTCACCACAAT+GGG + chr7.4:518402-518421 None:intergenic 45.0%
!! ACTGGTTTGTCTCTCTATCC+GGG - chr7.4:517232-517251 MS.gene050686:CDS 45.0%
!! CACTGGTTTGTCTCTCTATC+CGG - chr7.4:517231-517250 MS.gene050686:CDS 45.0%
!! TAACTATCCACACTTGGTGC+TGG + chr7.4:517583-517602 None:intergenic 45.0%
!! TGTTGGTTCCTCTCCAACAT+TGG + chr7.4:518193-518212 None:intergenic 45.0%
AAACCAGACATCACAGCACC+AGG - chr7.4:517643-517662 MS.gene050686:CDS 50.0%
AACAGTTGCTGCTGGCACAA+TGG - chr7.4:517162-517181 MS.gene050686:CDS 50.0%
ATAGCCGATCTAATGGCTGC+TGG + chr7.4:517832-517851 None:intergenic 50.0%
ATGTCATGTCCACACGTTGC+AGG - chr7.4:517766-517785 MS.gene050686:CDS 50.0%
CAGAGCGAGAAACAAGATCG+TGG - chr7.4:517321-517340 MS.gene050686:CDS 50.0%
CTCTCCACAATGGAACACCA+TGG - chr7.4:516974-516993 MS.gene050686:CDS 50.0%
GGAAATGGAGCCAAAGTCAC+TGG - chr7.4:517214-517233 MS.gene050686:CDS 50.0%
TAGCCGATCTAATGGCTGCT+GGG + chr7.4:517831-517850 None:intergenic 50.0%
TCTACATCTGCAGGGAACAG+AGG - chr7.4:516937-516956 MS.gene050686:CDS 50.0%
TGGTATTGCAGCTCTGTTGC+TGG + chr7.4:517703-517722 None:intergenic 50.0%
TTCTTCAGGCAAGGTCCCAA+TGG - chr7.4:517261-517280 MS.gene050686:CDS 50.0%
! ACCAGCTTCGCCTTTAGCTT+TGG - chr7.4:517918-517937 MS.gene050686:CDS 50.0%
! CCCAATAGAGCACTTGATCC+TGG - chr7.4:517958-517977 MS.gene050686:CDS 50.0%
! CCGAACACTTGCTACTCAAG+TGG - chr7.4:517360-517379 MS.gene050686:CDS 50.0%
! CTGGTTTGTCTCTCTATCCG+GGG - chr7.4:517233-517252 MS.gene050686:CDS 50.0%
! GGGGAACTTTTCTTCAGGCA+AGG - chr7.4:517252-517271 MS.gene050686:CDS 50.0%
! GTTGAGGCTAGTCACCACAA+TGG + chr7.4:518403-518422 None:intergenic 50.0%
!! CCAGCTTCGCCTTTAGCTTT+GGG - chr7.4:517919-517938 MS.gene050686:CDS 50.0%
CCCAAAGCTAAAGGCGAAGC+TGG + chr7.4:517922-517941 None:intergenic 55.0%
GAGCCCAGCAGCCATTAGAT+CGG - chr7.4:517825-517844 MS.gene050686:CDS 55.0%
TGTCCGGCTCCCAAAGCTAA+AGG + chr7.4:517931-517950 None:intergenic 55.0%
!! GTTCCTGGTGCTGTGATGTC+TGG + chr7.4:517649-517668 None:intergenic 55.0%
!! TCGCCTTTAGCTTTGGGAGC+CGG - chr7.4:517925-517944 MS.gene050686:CDS 55.0%
ATGGCTGCTGGGCTCCAACA+AGG + chr7.4:517820-517839 None:intergenic 60.0%
GCTGCTACACCTGCAACGTG+TGG + chr7.4:517778-517797 None:intergenic 60.0%
TGGCTGCTGGGCTCCAACAA+GGG + chr7.4:517819-517838 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr7.4 gene 516733 518443 516733 ID=MS.gene050686
chr7.4 mRNA 516733 518443 516733 ID=MS.gene050686.t1;Parent=MS.gene050686
chr7.4 exon 518180 518443 518180 ID=MS.gene050686.t1.exon1;Parent=MS.gene050686.t1
chr7.4 CDS 518180 518443 518180 ID=cds.MS.gene050686.t1;Parent=MS.gene050686.t1
chr7.4 exon 516733 518019 516733 ID=MS.gene050686.t1.exon2;Parent=MS.gene050686.t1
chr7.4 CDS 516733 518019 516733 ID=cds.MS.gene050686.t1;Parent=MS.gene050686.t1
Gene Sequence

>MS.gene050686

ATGGCTCCACATGCTCATGTATCCATGTACAAGGTGTTGTGGAAAGAAGGAGCATATGCATCTGATACAATAGCTGCAATTGATAGTGCAATATCAGATGGTGTAGATGTTCTTTCATTATCATTGGGTTTTGACGAGGCACCTTTGTATGAAGACCCTGTAGCTATAGCCACATTTGCAGCCATGGAGAAAAACATTTTTGTGTCTACATCTGCAGGGAACAGAGGACCAGTGCTTGAAACTCTCCACAATGGAACACCATGGGTAATATTACTTACTGCAATATCTCATTTATTCATAGCTTAATCAATCAATATATAATAAATACAAAAGACATTGTTTATACATAAGAAATGATTGGTCCATATGAAAGTGAAGTAGATAGCAAGAATAATTAACATAACTCACCCTTTATCACTAATAGGTAATAACAGTTGCTGCTGGCACAATGGATCGTGAATTTCATGGGGATTTAACACTTGGAAATGGAGCCAAAGTCACTGGTTTGTCTCTCTATCCGGGGAACTTTTCTTCAGGCAAGGTCCCAATGGTTTTCCTGAGCTCATGTGATAATTTGAAAGAACTCATCAGAGCGAGAAACAAGATCGTGGTGTGTGAAGACAAGAACCGAACACTTGCTACTCAAGTGGATAACTTGGACAGAATAAAAGTTGTTGCGGGTGTTTTCATATCAAATAGTTCTGAGGATATAACATATTACATTCAAACTAAGTTTCCATCTATTTTTTTGAATCCAATTAATGGAGAACTTATCAAGGATTTCATCAAGTGCAACACTAATCCAAAAGCAAGCATGACATTTAATAAAACTGTTTTAGGTACAAAACCAGCACCAAGTGTGGATAGTTATAGCTCAAGAGGACCATCACATAGTTGTCCATTTGTATTGAAACCAGACATCACAGCACCAGGAACACTAATCTTAGCTTCATGGCCTCAAAATGTTCCAGCAACAGAGCTGCAATACCAGAACAGTCTCTTCAGCAACTTCAACCTGTTAAGTGGAACATCAATGTCATGTCCACACGTTGCAGGTGTAGCAGCACTTTTAAAAGAAATGCACCCTTGTTGGAGCCCAGCAGCCATTAGATCGGCTATGATGACAACGTCAGACATGTTAGACAACACAAAAGAACTCATCACAGACATTGGTAATGGTTACAAACCAGCTTCGCCTTTAGCTTTGGGAGCCGGACATATCAATCCCAATAGAGCACTTGATCCTGGACTTGTTTATGATGCAGGAAAACAAGATTATGTGAATCTTCTATGTGCATTAAACTTCACTCAGAAGAATATCACGGCCATCACGAGATCATCTTTTAACAATTGTTCTAACCCTTCTTTGGACCTTAATTACCCTTCTTTTATTGCCTTTTCCAATAATGCTAGTATTAAATCAAAGGTGATTACACAAGAATTTCAAAGAACAGTAACCAATGTTGGAGAGGAACCAACAATCTACGTAGCCAACATTACACCTATTGAAGGGTTCCATGTTAGTGTTGTGCCAAACAAGTTGGTGTTTAAGGAGAAAAATGAAAAGGTGGCATACAAGTTGAGGATAGAAGGTCCCAAAATGGAGCAAAATAAAGTAGTTTTTGGGTATCTCACTTGGACAGACTCGAAACACAATGTTAGAAGTCCCATTGTGGTGACTAGCCTCAACTCAGAATTAACACCCCCATAG

Protein sequence

>MS.gene050686.t1

MAPHAHVSMYKVLWKEGAYASDTIAAIDSAISDGVDVLSLSLGFDEAPLYEDPVAIATFAAMEKNIFVSTSAGNRGPVLETLHNGTPWVITVAAGTMDREFHGDLTLGNGAKVTGLSLYPGNFSSGKVPMVFLSSCDNLKELIRARNKIVVCEDKNRTLATQVDNLDRIKVVAGVFISNSSEDITYYIQTKFPSIFLNPINGELIKDFIKCNTNPKASMTFNKTVLGTKPAPSVDSYSSRGPSHSCPFVLKPDITAPGTLILASWPQNVPATELQYQNSLFSNFNLLSGTSMSCPHVAGVAALLKEMHPCWSPAAIRSAMMTTSDMLDNTKELITDIGNGYKPASPLALGAGHINPNRALDPGLVYDAGKQDYVNLLCALNFTQKNITAITRSSFNNCSNPSLDLNYPSFIAFSNNASIKSKVITQEFQRTVTNVGEEPTIYVANITPIEGFHVSVVPNKLVFKEKNEKVAYKLRIEGPKMEQNKVVFGYLTWTDSKHNVRSPIVVTSLNSELTPP