AlfalfaGEDB | MS.gene92077

M. sativa cultivar XinJiangDaYe / MS.gene92077

KEGG: K13448
GO: GO:0003674 GO:0005488 GO:0005509 GO:0043167 GO:0043169 GO:0046872
PFAM: PF13499.9

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene92077.t1	XP_003609145.1	96.4	165	6	0	1	165	4	168	1.40E-59	239.2

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene92077.t1	Q6L5F4	69.3	114	34	1	5	117	22	135	1.1e-36	154.5

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene92077.t1	G7JT20	96.4	165	6	0	1	165	4	168	9.9e-60	239.2

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049813	MS.gene92077	0.807969	3.90E-50	-1.69E-46
MS.gene05240	MS.gene92077	0.830262	3.24E-55	-1.69E-46
MS.gene052494	MS.gene92077	0.824208	9.14E-54	-1.69E-46
MS.gene053097	MS.gene92077	0.820846	5.53E-53	-1.69E-46
MS.gene054146	MS.gene92077	0.804056	2.59E-49	-1.69E-46
MS.gene054277	MS.gene92077	0.816588	5.12E-52	-1.69E-46
MS.gene05470	MS.gene92077	-0.814048	1.88E-51	-1.69E-46
MS.gene054884	MS.gene92077	0.808356	3.22E-50	-1.69E-46
MS.gene055977	MS.gene92077	0.810791	9.67E-51	-1.69E-46
MS.gene061038	MS.gene92077	0.820525	6.55E-53	-1.69E-46
MS.gene061044	MS.gene92077	0.804297	2.31E-49	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene92077.t1	MTR_4g112460	96.364	165	6	0	1	165	4	168	2.59e-115	323
MS.gene92077.t1	MTR_8g069915	71.523	151	43	0	4	154	8	158	7.69e-78	229
MS.gene92077.t1	MTR_8g066630	52.941	153	69	2	1	150	8	160	3.71e-50	159
MS.gene92077.t1	MTR_7g087610	43.972	141	77	1	4	144	8	146	1.73e-36	123
MS.gene92077.t1	MTR_7g087610	46.875	64	34	0	87	150	16	79	1.40e-12	62.0
MS.gene92077.t1	MTR_6g025320	43.262	141	78	1	4	144	8	146	9.02e-36	122
MS.gene92077.t1	MTR_6g025320	46.875	64	34	0	87	150	16	79	1.25e-12	62.4
MS.gene92077.t1	MTR_1g076650	43.056	144	74	2	4	144	8	146	4.64e-35	120
MS.gene92077.t1	MTR_1g076650	37.778	90	53	1	78	164	4	93	2.24e-12	61.6
MS.gene92077.t1	MTR_5g088320	42.553	141	79	1	4	144	8	146	4.86e-35	120
MS.gene92077.t1	MTR_5g088320	46.875	64	34	0	87	150	16	79	1.26e-12	62.4
MS.gene92077.t1	MTR_1g041285	41.844	141	80	1	4	144	8	146	3.69e-33	115
MS.gene92077.t1	MTR_1g041285	43.421	76	39	2	75	147	2	76	3.82e-12	60.8
MS.gene92077.t1	MTR_1g071150	41.135	141	80	2	4	144	8	145	2.95e-28	102
MS.gene92077.t1	MTR_7g115040	34.028	144	93	1	1	144	5	146	9.81e-26	96.3
MS.gene92077.t1	MTR_0168s0120	42.857	112	62	1	33	144	1	110	1.29e-25	94.7
MS.gene92077.t1	MTR_6g025320	42.857	112	62	1	33	144	1	110	1.29e-25	94.7
MS.gene92077.t1	MTR_1g046950	31.429	140	96	0	7	146	3	142	3.27e-22	87.0
MS.gene92077.t1	MTR_8g107110	33.333	144	93	2	1	144	17	157	3.33e-22	87.8
MS.gene92077.t1	MTR_3g055570	35.172	145	77	1	5	149	49	176	5.93e-22	87.4
MS.gene92077.t1	MTR_5g079340	30.986	142	91	2	7	146	3	139	3.48e-21	84.3
MS.gene92077.t1	MTR_3g067610	32.143	140	89	2	8	147	5	138	3.58e-21	84.3
MS.gene92077.t1	MTR_8g105230	33.835	133	86	1	8	140	36	166	1.55e-20	84.0
MS.gene92077.t1	MTR_4g067270	33.553	152	91	3	7	153	4	150	2.55e-20	82.4
MS.gene92077.t1	MTR_1g026190	32.215	149	93	3	4	150	383	525	4.58e-20	86.3
MS.gene92077.t1	MTR_5g009830	34.932	146	87	3	9	152	372	511	5.62e-20	86.3
MS.gene92077.t1	MTR_5g011850	32.624	141	91	2	4	144	8	144	7.29e-20	81.3
MS.gene92077.t1	MTR_1g047100	31.655	139	94	1	7	145	3	140	7.47e-20	80.9
MS.gene92077.t1	MTR_1g032070	32.374	139	92	1	9	147	47	183	2.10e-19	81.3
MS.gene92077.t1	MTR_1g032070	47.692	65	34	0	82	146	45	109	2.42e-12	62.4
MS.gene92077.t1	MTR_4g086260	29.577	142	96	1	6	147	55	192	6.31e-19	79.7
MS.gene92077.t1	MTR_3g055585	34.559	136	72	1	5	140	49	167	1.14e-18	78.6
MS.gene92077.t1	MTR_5g027000	34.014	147	92	2	1	144	12	156	1.17e-18	78.2
MS.gene92077.t1	MTR_5g092810	35.211	142	86	3	4	144	393	529	1.97e-18	81.6
MS.gene92077.t1	MTR_7g106710	31.757	148	96	3	4	151	436	578	2.79e-18	81.3
MS.gene92077.t1	MTR_0028s0170	34.058	138	87	3	9	146	384	517	3.74e-18	80.9
MS.gene92077.t1	MTR_2g098890	34.266	143	86	3	7	144	63	202	4.14e-18	78.2
MS.gene92077.t1	MTR_8g099095	35.172	145	86	4	9	151	372	510	4.26e-18	80.9
MS.gene92077.t1	MTR_3g051770	34.694	147	87	3	4	144	384	527	5.01e-18	80.5
MS.gene92077.t1	MTR_7g074020	29.605	152	97	3	8	159	30	171	5.82e-18	76.6
MS.gene92077.t1	MTR_4g132070	34.965	143	85	3	4	144	392	528	8.20e-18	80.1
MS.gene92077.t1	MTR_1g096490	30.667	150	99	3	4	153	331	475	1.11e-17	79.3
MS.gene92077.t1	MTR_7g089760	32.168	143	93	2	8	148	5	145	1.32e-17	75.5
MS.gene92077.t1	MTR_6g023460	29.577	142	97	1	3	144	3	141	2.28e-17	74.3
MS.gene92077.t1	MTR_8g095440	32.168	143	92	3	4	146	331	468	2.52e-17	78.6
MS.gene92077.t1	MTR_1g030440	34.266	143	86	2	7	144	21	160	2.54e-17	75.1
MS.gene92077.t1	MTR_5g017510	30.496	141	90	4	7	144	47	182	6.69e-17	74.3
MS.gene92077.t1	MTR_5g017560	30.496	141	90	4	7	144	47	182	6.69e-17	74.3
MS.gene92077.t1	MTR_5g099240	30.769	143	94	3	4	146	325	462	9.15e-17	77.0
MS.gene92077.t1	MTR_3g055520	32.353	136	75	1	5	140	49	167	1.00e-16	73.6
MS.gene92077.t1	MTR_3g098090	30.769	143	94	3	4	146	333	470	1.01e-16	76.6
MS.gene92077.t1	MTR_5g099240	30.769	143	94	3	4	146	397	534	1.02e-16	76.6
MS.gene92077.t1	MTR_7g068710	31.206	141	94	2	4	144	357	494	1.05e-16	76.6
MS.gene92077.t1	MTR_5g017550	28.261	138	96	1	7	144	47	181	1.69e-16	73.2
MS.gene92077.t1	MTR_6g079570	27.660	141	98	2	6	145	24	161	1.89e-16	72.8
MS.gene92077.t1	MTR_4g115170	30.061	163	98	2	8	154	64	226	2.86e-16	73.6
MS.gene92077.t1	MTR_5g089320	31.884	138	90	3	9	146	374	507	3.39e-16	75.1
MS.gene92077.t1	MTR_3g055510	42.466	73	42	0	78	150	67	139	3.55e-16	71.2
MS.gene92077.t1	MTR_1g054865	30.496	141	93	3	4	144	462	597	4.52e-16	75.1
MS.gene92077.t1	MTR_6g007613	28.369	141	99	2	8	148	29	167	4.66e-16	71.6
MS.gene92077.t1	MTR_3g098070	30.070	143	95	3	4	146	330	467	5.29e-16	74.7
MS.gene92077.t1	MTR_1g041150	28.667	150	102	2	4	153	419	563	6.21e-16	74.7
MS.gene92077.t1	MTR_4g107490	31.469	143	93	3	3	144	373	511	9.76e-16	73.9
MS.gene92077.t1	MTR_1g055255	29.054	148	100	3	4	151	425	567	1.51e-15	73.6
MS.gene92077.t1	MTR_7g074020	30.894	123	83	2	8	130	30	150	2.01e-15	69.7
MS.gene92077.t1	MTR_7g075040	30.380	158	100	5	1	150	40	195	3.06e-15	70.1
MS.gene92077.t1	MTR_3g089090	32.331	133	87	2	12	144	9	138	6.37e-15	68.2
MS.gene92077.t1	MTR_4g103655	31.579	133	88	1	12	144	10	139	6.45e-15	68.2
MS.gene92077.t1	MTR_3g089070	32.331	133	87	2	12	144	10	139	6.65e-15	68.2
MS.gene92077.t1	MTR_7g090450	30.612	147	99	3	1	144	66	212	1.38e-14	68.9
MS.gene92077.t1	MTR_4g103650	29.927	137	93	1	8	144	2	135	2.31e-14	66.6
MS.gene92077.t1	MTR_8g036075	29.371	143	95	3	8	144	49	191	9.03e-14	66.2
MS.gene92077.t1	MTR_4g132040	30.496	141	94	2	4	144	396	532	9.09e-14	68.2
MS.gene92077.t1	MTR_4g103630	32.624	141	84	4	8	144	6	139	2.07e-13	63.9
MS.gene92077.t1	MTR_7g106710	29.134	127	85	2	4	130	436	557	7.25e-13	65.9
MS.gene92077.t1	MTR_1g052530	29.655	145	97	3	1	144	350	490	8.06e-13	65.5
MS.gene92077.t1	MTR_6g007613	28.455	123	86	2	8	130	29	149	9.28e-13	62.8
MS.gene92077.t1	MTR_3g055480	36.250	80	44	2	70	146	33	108	1.50e-12	61.2
MS.gene92077.t1	MTR_7g091890	27.083	144	102	1	1	144	356	496	1.31e-11	62.0
MS.gene92077.t1	MTR_4g122260	26.619	139	100	1	9	145	17	155	3.52e-11	58.5
MS.gene92077.t1	MTR_4g066660	28.873	142	95	3	4	144	373	509	4.47e-11	60.5
MS.gene92077.t1	MTR_8g078270	26.812	138	97	2	9	145	54	188	5.67e-11	58.5
MS.gene92077.t1	MTR_5g022030	30.872	149	92	4	5	149	403	544	7.54e-11	59.7

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene92077.t1	AT1G18530	74.834	151	38	0	4	154	3	153	4.36e-81	237
MS.gene92077.t1	AT3G25600	69.079	152	47	0	3	154	7	158	1.19e-75	223
MS.gene92077.t1	AT1G32250	50.993	151	70	1	4	150	12	162	4.59e-47	151
MS.gene92077.t1	AT3G03000	53.061	147	68	1	4	150	16	161	6.72e-41	135
MS.gene92077.t1	AT3G43810	43.262	141	78	1	4	144	8	146	9.45e-36	122
MS.gene92077.t1	AT3G43810	46.875	64	34	0	87	150	16	79	1.31e-12	62.4
MS.gene92077.t1	AT5G37780	43.262	141	78	1	4	144	8	146	1.96e-35	121
MS.gene92077.t1	AT5G37780	45.312	64	35	0	87	150	16	79	4.22e-12	60.8
MS.gene92077.t1	AT1G66410	43.262	141	78	1	4	144	8	146	1.96e-35	121
MS.gene92077.t1	AT1G66410	45.312	64	35	0	87	150	16	79	4.22e-12	60.8
MS.gene92077.t1	AT3G56800	42.553	141	79	1	4	144	8	146	3.16e-35	120
MS.gene92077.t1	AT3G56800	46.875	64	34	0	87	150	16	79	1.32e-12	62.4
MS.gene92077.t1	AT2G27030	42.553	141	79	1	4	144	8	146	3.16e-35	120
MS.gene92077.t1	AT2G27030	46.875	64	34	0	87	150	16	79	1.32e-12	62.4
MS.gene92077.t1	AT2G41110	42.553	141	79	1	4	144	8	146	3.16e-35	120
MS.gene92077.t1	AT2G41110	46.875	64	34	0	87	150	16	79	1.32e-12	62.4
MS.gene92077.t1	AT3G43810	43.262	141	78	1	4	144	8	146	3.39e-35	122
MS.gene92077.t1	AT3G43810	46.875	64	34	0	87	150	16	79	2.02e-12	63.2
MS.gene92077.t1	AT5G21274	42.553	141	79	1	4	144	8	146	4.14e-35	120
MS.gene92077.t1	AT5G21274	46.875	64	34	0	87	150	16	79	1.42e-12	62.0
MS.gene92077.t1	AT2G27030	42.553	141	79	1	4	144	8	146	4.25e-35	121
MS.gene92077.t1	AT2G27030	46.875	64	34	0	87	150	16	79	2.73e-12	62.0
MS.gene92077.t1	AT4G14640	41.667	144	76	2	4	144	9	147	2.34e-34	118
MS.gene92077.t1	AT3G22930	42.553	141	79	2	4	144	31	169	5.60e-33	115
MS.gene92077.t1	AT3G22930	44.444	72	37	1	79	147	28	99	4.01e-11	58.9
MS.gene92077.t1	AT2G41110	39.869	153	78	2	4	144	8	158	2.39e-31	110
MS.gene92077.t1	AT5G37780	39.103	156	78	2	4	144	8	161	4.96e-31	110
MS.gene92077.t1	AT5G37780	36.527	167	78	2	4	144	8	172	1.60e-29	106
MS.gene92077.t1	AT3G51920	38.298	141	85	1	4	144	8	146	2.19e-29	105
MS.gene92077.t1	AT1G66410	40.397	151	78	2	4	144	8	156	6.21e-29	104
MS.gene92077.t1	AT5G37780	43.089	123	68	1	22	144	13	133	2.06e-28	102
MS.gene92077.t1	AT4G14640	41.270	126	66	2	22	144	9	129	1.16e-27	100
MS.gene92077.t1	AT1G66410	43.750	112	61	1	33	144	1	110	4.72e-26	95.9
MS.gene92077.t1	AT1G66410	43.750	112	61	1	33	144	1	110	4.72e-26	95.9
MS.gene92077.t1	AT3G43810	42.857	112	62	1	33	144	1	110	1.35e-25	94.7
MS.gene92077.t1	AT3G43810	42.857	112	62	1	33	144	1	110	1.35e-25	94.7
MS.gene92077.t1	AT4G37010	34.043	141	91	1	8	148	27	165	2.62e-23	90.5
MS.gene92077.t1	AT4G37010	34.043	141	91	1	8	148	31	169	3.08e-23	90.5
MS.gene92077.t1	AT2G41100	33.121	157	90	2	4	145	62	218	3.28e-23	93.2
MS.gene92077.t1	AT2G41100	30.000	130	77	2	32	147	1	130	6.85e-14	67.8
MS.gene92077.t1	AT2G41100	33.121	157	90	2	4	145	62	218	3.28e-23	93.2
MS.gene92077.t1	AT2G41100	30.000	130	77	2	32	147	1	130	6.85e-14	67.8
MS.gene92077.t1	AT2G41100	33.121	157	90	2	4	145	62	218	3.28e-23	93.2
MS.gene92077.t1	AT2G41100	30.000	130	77	2	32	147	1	130	6.85e-14	67.8
MS.gene92077.t1	AT2G41100	33.121	157	90	2	4	145	97	253	4.59e-23	93.2
MS.gene92077.t1	AT2G41100	32.911	158	92	2	4	147	8	165	6.07e-23	93.2
MS.gene92077.t1	AT2G41100	33.121	157	90	2	4	145	97	253	4.59e-23	93.2
MS.gene92077.t1	AT2G41100	32.911	158	92	2	4	147	8	165	6.07e-23	93.2
MS.gene92077.t1	AT2G41090	36.429	140	84	1	5	144	9	143	2.72e-22	88.6
MS.gene92077.t1	AT5G37770	30.345	145	99	1	6	148	15	159	3.16e-21	85.1
MS.gene92077.t1	AT5G37770	30.345	145	99	1	6	148	15	159	3.16e-21	85.1
MS.gene92077.t1	AT1G24620	33.333	141	92	1	5	145	34	172	1.38e-20	84.0
MS.gene92077.t1	AT1G05990	34.507	142	84	3	8	144	5	142	2.94e-20	82.4
MS.gene92077.t1	AT2G15680	29.286	140	95	1	6	145	48	183	3.87e-20	82.8
MS.gene92077.t1	AT4G14640	40.385	104	54	2	4	104	9	107	6.93e-20	80.5
MS.gene92077.t1	AT3G22930	41.176	102	58	2	4	105	31	130	2.09e-19	79.3
MS.gene92077.t1	AT3G22930	45.070	71	36	1	79	146	28	98	1.59e-11	58.9
MS.gene92077.t1	AT1G18210	29.655	145	94	2	3	145	16	154	2.41e-19	80.5
MS.gene92077.t1	AT1G18210	29.655	145	94	2	3	145	16	154	2.41e-19	80.5
MS.gene92077.t1	AT4G03290	35.417	144	86	3	8	146	5	146	2.78e-19	79.7
MS.gene92077.t1	AT3G50360	30.496	141	96	1	8	148	27	165	2.94e-19	80.1
MS.gene92077.t1	AT1G35670	32.867	143	91	3	4	146	327	464	4.06e-19	83.6
MS.gene92077.t1	AT2G43290	32.168	143	92	2	7	144	64	206	1.13e-18	79.7
MS.gene92077.t1	AT5G17470	32.374	139	86	2	11	145	5	139	1.77e-18	77.4
MS.gene92077.t1	AT1G76040	32.215	149	93	3	4	150	174	316	2.20e-18	80.5
MS.gene92077.t1	AT1G76040	32.215	149	93	3	4	150	174	316	2.20e-18	80.5
MS.gene92077.t1	AT4G12860	33.094	139	89	2	8	144	5	141	2.47e-18	77.4
MS.gene92077.t1	AT1G74740	32.168	143	92	3	3	144	359	497	2.60e-18	81.3
MS.gene92077.t1	AT1G12310	30.496	141	94	2	4	144	9	145	3.16e-18	77.0
MS.gene92077.t1	AT1G76040	32.215	149	93	3	4	150	412	554	3.25e-18	81.3
MS.gene92077.t1	AT4G38230	31.469	143	93	3	4	146	181	318	3.71e-18	80.1
MS.gene92077.t1	AT1G66400	30.882	136	94	0	9	144	16	151	3.85e-18	77.0
MS.gene92077.t1	AT1G61950	34.247	146	88	3	1	144	397	536	3.92e-18	80.9
MS.gene92077.t1	AT4G38230	31.469	143	93	3	4	146	325	462	4.89e-18	80.5
MS.gene92077.t1	AT4G38230	31.469	143	93	3	4	146	325	462	4.89e-18	80.5
MS.gene92077.t1	AT4G09570	31.469	143	93	2	4	146	326	463	5.04e-18	80.5
MS.gene92077.t1	AT4G38230	31.469	143	93	3	4	146	355	492	5.20e-18	80.5
MS.gene92077.t1	AT1G62820	29.787	141	95	2	4	144	9	145	5.80e-18	76.3
MS.gene92077.t1	AT5G12180	32.639	144	93	2	9	152	379	518	1.68e-17	79.0
MS.gene92077.t1	AT5G19360	32.394	142	92	2	9	150	374	511	2.30e-17	78.6
MS.gene92077.t1	AT3G51850	30.282	142	96	1	3	144	354	492	2.33e-17	78.6
MS.gene92077.t1	AT4G35310	31.469	143	93	3	4	146	398	535	2.53e-17	78.6
MS.gene92077.t1	AT4G35310	31.469	143	93	3	4	146	398	535	2.53e-17	78.6
MS.gene92077.t1	AT4G04695	33.333	150	91	4	4	151	332	474	4.85e-17	77.8
MS.gene92077.t1	AT4G04720	33.784	148	89	4	4	149	380	520	8.17e-17	77.0
MS.gene92077.t1	AT4G04720	33.784	148	89	4	4	149	380	520	8.17e-17	77.0
MS.gene92077.t1	AT5G23580	31.469	143	93	3	4	146	323	460	1.03e-16	76.6
MS.gene92077.t1	AT4G23650	34.247	146	88	4	9	152	384	523	1.91e-16	76.3
MS.gene92077.t1	AT1G50700	30.822	146	93	3	1	144	371	510	2.30e-16	75.9
MS.gene92077.t1	AT2G17290	30.070	143	95	3	4	146	386	523	2.31e-16	75.9
MS.gene92077.t1	AT2G17290	30.070	143	95	3	4	146	386	523	2.31e-16	75.9
MS.gene92077.t1	AT4G04700	32.192	146	95	2	4	149	332	473	2.44e-16	75.9
MS.gene92077.t1	AT2G41410	33.557	149	96	3	4	150	66	213	3.75e-16	73.2
MS.gene92077.t1	AT4G04710	34.266	143	86	3	4	144	319	455	5.31e-16	74.7
MS.gene92077.t1	AT4G04710	34.266	143	86	3	4	144	333	469	5.65e-16	74.7
MS.gene92077.t1	AT4G04710	34.266	143	86	3	4	144	346	482	5.88e-16	74.7
MS.gene92077.t1	AT1G73630	26.087	138	96	2	8	145	20	151	5.92e-16	71.2
MS.gene92077.t1	AT3G20410	31.507	146	92	3	1	144	389	528	8.70e-16	74.3
MS.gene92077.t1	AT3G20410	31.507	146	92	3	1	144	389	528	8.70e-16	74.3
MS.gene92077.t1	AT3G59440	33.099	142	84	5	9	145	52	187	9.24e-16	71.6
MS.gene92077.t1	AT4G21940	32.168	143	89	3	4	144	402	538	1.50e-15	73.6
MS.gene92077.t1	AT4G21940	32.168	143	89	3	4	144	402	538	1.71e-15	73.2
MS.gene92077.t1	AT2G41100	30.952	126	72	2	35	145	3	128	5.28e-15	69.7
MS.gene92077.t1	AT2G36180	27.737	137	98	1	9	144	1	137	6.29e-15	68.2
MS.gene92077.t1	AT3G50770	32.168	143	90	4	8	145	64	204	9.22e-15	69.3
MS.gene92077.t1	AT4G04710	33.793	145	86	4	4	144	346	484	9.53e-15	71.2
MS.gene92077.t1	AT5G04870	27.586	145	100	3	4	148	451	590	9.81e-15	71.2
MS.gene92077.t1	AT2G41860	31.034	145	95	3	1	144	352	492	1.42e-14	70.9
MS.gene92077.t1	AT2G41860	31.034	145	95	3	1	144	352	492	1.47e-14	70.5
MS.gene92077.t1	AT3G10190	28.777	139	94	3	8	144	70	205	1.80e-14	68.6
MS.gene92077.t1	AT4G04740	31.469	143	90	3	4	144	369	505	2.10e-14	70.1
MS.gene92077.t1	AT4G04740	31.469	143	90	3	4	144	369	505	2.10e-14	70.1
MS.gene92077.t1	AT4G04740	31.469	143	90	3	4	144	369	505	2.10e-14	70.1
MS.gene92077.t1	AT4G04740	31.469	143	90	3	4	144	369	505	2.10e-14	70.1
MS.gene92077.t1	AT4G04740	31.469	143	90	3	4	144	369	505	2.10e-14	70.1
MS.gene92077.t1	AT4G04740	31.469	143	90	3	4	144	369	505	2.10e-14	70.1
MS.gene92077.t1	AT1G18890	31.469	143	93	3	3	144	363	501	2.70e-14	69.7
MS.gene92077.t1	AT2G38910	29.139	151	102	3	4	154	435	580	3.66e-14	69.7
MS.gene92077.t1	AT3G10660	27.586	145	100	3	4	148	487	626	4.04e-14	69.3
MS.gene92077.t1	AT3G10660	27.586	145	100	3	4	148	487	626	4.04e-14	69.3
MS.gene92077.t1	AT5G42380	30.216	139	96	1	6	144	47	184	4.76e-14	67.0
MS.gene92077.t1	AT3G07490	34.211	152	88	5	8	153	5	150	5.44e-14	65.9
MS.gene92077.t1	AT2G41100	50.000	58	29	0	88	145	17	74	9.13e-14	65.1
MS.gene92077.t1	AT3G57530	34.058	138	83	5	9	144	369	500	3.58e-13	66.6
MS.gene92077.t1	AT3G03400	27.907	129	93	0	9	137	6	134	5.14e-13	63.2
MS.gene92077.t1	AT2G31500	33.103	145	88	6	11	151	374	513	2.55e-12	64.3
MS.gene92077.t1	AT3G03410	27.407	135	87	1	10	144	4	127	4.31e-12	60.5
MS.gene92077.t1	AT1G50700	25.581	172	94	4	1	144	371	536	6.21e-12	63.2
MS.gene92077.t1	AT4G36070	34.000	150	88	4	4	149	374	516	7.14e-12	62.8
MS.gene92077.t1	AT4G36070	33.553	152	86	5	4	149	374	516	7.48e-12	62.8
MS.gene92077.t1	AT1G21550	28.472	144	97	4	7	144	9	152	8.33e-12	60.1
MS.gene92077.t1	AT3G51850	29.091	110	75	1	3	112	354	460	8.36e-12	62.8

Find 29 sgRNAs with CRISPR-Local

Find 31 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TCAAATCTTATTAGCCAAAA+TGG	0.199928	8.1:-14747675	MS.gene92077:CDS
GTTTCTGTTTGAATCCATTT+TGG	0.223500	8.1:+14747661	None:intergenic
TGCATTCATGTTCGGCATTA+TGG	0.231984	8.1:+14747607	None:intergenic
CGCTCTGCTTCTGATTTATT+AGG	0.273541	8.1:-14747374	MS.gene92077:CDS
CTGCTAGTTCTAACATTGTT+AGG	0.317076	8.1:+14747741	None:intergenic
ATTCATTTCAGCAGCTGAAT+TGG	0.352081	8.1:-14747519	MS.gene92077:CDS
GATGATTAGAGAAGCTGATA+TGG	0.368224	8.1:-14747444	MS.gene92077:CDS
GGGTCAGCCACTTACATATA+AGG	0.372815	8.1:-14747477	MS.gene92077:CDS
TCGTTAGGGCTAAAGCCTTC+AGG	0.374738	8.1:-14747707	MS.gene92077:CDS
GCAGCACTTATTCGTTCGTT+AGG	0.382441	8.1:-14747722	MS.gene92077:CDS
TAGTGAGTTTGCTACAATCA+TGG	0.443483	8.1:-14747399	MS.gene92077:CDS
CAGCACTTATTCGTTCGTTA+GGG	0.460217	8.1:-14747721	MS.gene92077:CDS
ATTTCAGCAGCTGAATTGGC+TGG	0.463901	8.1:-14747515	MS.gene92077:CDS
AATACTTCTGCATTCATGTT+CGG	0.467152	8.1:+14747599	None:intergenic
TGCTTCGATCGCGATGGGAA+TGG	0.468041	8.1:-14747542	MS.gene92077:CDS
GTGAATCAAGAACAACTCAT+AGG	0.474821	8.1:-14747575	MS.gene92077:CDS
ATAAGCTCCTTATATGTAAG+TGG	0.483364	8.1:+14747470	None:intergenic
AGCTGAATTGGCTGGAGCAA+TGG	0.497837	8.1:-14747507	MS.gene92077:CDS
GGATTCAAACAGAAACGGTT+CGG	0.505680	8.1:-14747654	MS.gene92077:CDS
TCAAATGCTTCGATCGCGAT+GGG	0.540427	8.1:-14747547	MS.gene92077:CDS
TTCAAATGCTTCGATCGCGA+TGG	0.556995	8.1:-14747548	MS.gene92077:CDS
AAAATGGATTCAAACAGAAA+CGG	0.570631	8.1:-14747659	MS.gene92077:CDS
TAACATTGTTAGGCTGCCAT+CGG	0.573272	8.1:+14747751	None:intergenic
ATTTGAACTTCGTCACCTGA+AGG	0.579483	8.1:+14747692	None:intergenic
GAACATGAATGCAGAAGTAT+TGG	0.581543	8.1:-14747597	MS.gene92077:CDS
AATCTTCAGTCGATTCGACA+TGG	0.588153	8.1:-14747777	MS.gene92077:CDS
CGATTCGACATGGATTCCGA+TGG	0.648654	8.1:-14747767	MS.gene92077:CDS
ATTAGAGAAGCTGATATGGA+TGG	0.660029	8.1:-14747440	MS.gene92077:CDS
GAAGCTGATATGGATGGTGA+TGG	0.666205	8.1:-14747434	MS.gene92077:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	TCAAATCTTATTAGCCAAAA+TGG	-	chr8.1:14747465-14747484	MS.gene92077:CDS	25.0%
!!	AAAATGGATTCAAACAGAAA+CGG	-	chr8.1:14747481-14747500	MS.gene92077:CDS	25.0%
	AATACTTCTGCATTCATGTT+CGG	+	chr8.1:14747544-14747563	None:intergenic	30.0%
	ATAAGCTCCTTATATGTAAG+TGG	+	chr8.1:14747673-14747692	None:intergenic	30.0%
!	GTTTCTGTTTGAATCCATTT+TGG	+	chr8.1:14747482-14747501	None:intergenic	30.0%
	ATTAGAGAAGCTGATATGGA+TGG	-	chr8.1:14747700-14747719	MS.gene92077:CDS	35.0%
	ATTCATTTCAGCAGCTGAAT+TGG	-	chr8.1:14747621-14747640	MS.gene92077:CDS	35.0%
	GATGATTAGAGAAGCTGATA+TGG	-	chr8.1:14747696-14747715	MS.gene92077:CDS	35.0%
	GTGAATCAAGAACAACTCAT+AGG	-	chr8.1:14747565-14747584	MS.gene92077:CDS	35.0%
!	GAACATGAATGCAGAAGTAT+TGG	-	chr8.1:14747543-14747562	MS.gene92077:CDS	35.0%
!!	CTGCTAGTTCTAACATTGTT+AGG	+	chr8.1:14747402-14747421	None:intergenic	35.0%
!!	TAGTGAGTTTGCTACAATCA+TGG	-	chr8.1:14747741-14747760	MS.gene92077:CDS	35.0%
	ATTTGAACTTCGTCACCTGA+AGG	+	chr8.1:14747451-14747470	None:intergenic	40.0%
	CAGCACTTATTCGTTCGTTA+GGG	-	chr8.1:14747419-14747438	MS.gene92077:CDS	40.0%
	CGCTCTGCTTCTGATTTATT+AGG	-	chr8.1:14747766-14747785	MS.gene92077:CDS	40.0%
	GGATTCAAACAGAAACGGTT+CGG	-	chr8.1:14747486-14747505	MS.gene92077:CDS	40.0%
	TAACATTGTTAGGCTGCCAT+CGG	+	chr8.1:14747392-14747411	None:intergenic	40.0%
	TGCATTCATGTTCGGCATTA+TGG	+	chr8.1:14747536-14747555	None:intergenic	40.0%
!!	AATCTTCAGTCGATTCGACA+TGG	-	chr8.1:14747363-14747382	MS.gene92077:CDS	40.0%
	ATTTCAGCAGCTGAATTGGC+TGG	-	chr8.1:14747625-14747644	MS.gene92077:CDS	45.0%
	GAAGCTGATATGGATGGTGA+TGG	-	chr8.1:14747706-14747725	MS.gene92077:CDS	45.0%
	GCAGCACTTATTCGTTCGTT+AGG	-	chr8.1:14747418-14747437	MS.gene92077:CDS	45.0%
	GCTGGAGCAATGGCAAAAAT+GGG	-	chr8.1:14747643-14747662	MS.gene92077:CDS	45.0%
	GGGTCAGCCACTTACATATA+AGG	-	chr8.1:14747663-14747682	MS.gene92077:CDS	45.0%
	TCAAATGCTTCGATCGCGAT+GGG	-	chr8.1:14747593-14747612	MS.gene92077:CDS	45.0%
	TTCAAATGCTTCGATCGCGA+TGG	-	chr8.1:14747592-14747611	MS.gene92077:CDS	45.0%
	AGCTGAATTGGCTGGAGCAA+TGG	-	chr8.1:14747633-14747652	MS.gene92077:CDS	50.0%
	CGATTCGACATGGATTCCGA+TGG	-	chr8.1:14747373-14747392	MS.gene92077:CDS	50.0%
	GGCTGGAGCAATGGCAAAAA+TGG	-	chr8.1:14747642-14747661	MS.gene92077:CDS	50.0%
	TCGTTAGGGCTAAAGCCTTC+AGG	-	chr8.1:14747433-14747452	MS.gene92077:CDS	50.0%
	TGCTTCGATCGCGATGGGAA+TGG	-	chr8.1:14747598-14747617	MS.gene92077:CDS	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr8.1	gene	14747331	14747831	14747331	ID=MS.gene92077
chr8.1	mRNA	14747331	14747831	14747331	ID=MS.gene92077.t1;Parent=MS.gene92077
chr8.1	exon	14747331	14747831	14747331	ID=MS.gene92077.t1.exon1;Parent=MS.gene92077.t1
chr8.1	CDS	14747331	14747831	14747331	ID=cds.MS.gene92077.t1;Parent=MS.gene92077.t1

Gene Sequence

>MS.gene92077

GTTAAAGTTGATCAACTTAATCAACTAAGAGAAATCTTCAGTCGATTCGACATGGATTCCGATGGCAGCCTAACAATGTTAGAACTAGCAGCACTTATTCGTTCGTTAGGGCTAAAGCCTTCAGGTGACGAAGTTCAAATCTTATTAGCCAAAATGGATTCAAACAGAAACGGTTCGGTTGAGTTCGATGAATTAGTAGAAGCCATAATGCCGAACATGAATGCAGAAGTATTGGTGAATCAAGAACAACTCATAGGTGTGTTCAAATGCTTCGATCGCGATGGGAATGGATTCATTTCAGCAGCTGAATTGGCTGGAGCAATGGCAAAAATGGGTCAGCCACTTACATATAAGGAGCTTATTGAGATGATTAGAGAAGCTGATATGGATGGTGATGGTGTTATTAGTTTTAGTGAGTTTGCTACAATCATGGCTCGCTCTGCTTCTGATTTATTAGGAGTGTTTGAATACAGACACAAAACACATTCATTTCAATTATAA

Protein sequence

>MS.gene92077.t1

VKVDQLNQLREIFSRFDMDSDGSLTMLELAALIRSLGLKPSGDEVQILLAKMDSNRNGSVEFDELVEAIMPNMNAEVLVNQEQLIGVFKCFDRDGNGFISAAELAGAMAKMGQPLTYKELIEMIREADMDGDGVISFSEFATIMARSASDLLGVFEYRHKTHSFQL