Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92122.t1 | XP_013444743.1 | 97.2 | 962 | 27 | 0 | 1 | 962 | 62 | 1023 | 0.00E+00 | 1867.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92122.t1 | A0A072TPJ6 | 97.2 | 962 | 27 | 0 | 1 | 962 | 62 | 1023 | 0.0e+00 | 1867.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049378 | MS.gene92122 | 0.819425 | 1.17E-52 | -1.69E-46 |
| MS.gene049647 | MS.gene92122 | 0.807153 | 5.81E-50 | -1.69E-46 |
| MS.gene050226 | MS.gene92122 | 0.800766 | 1.24E-48 | -1.69E-46 |
| MS.gene050227 | MS.gene92122 | 0.805641 | 1.21E-49 | -1.69E-46 |
| MS.gene050228 | MS.gene92122 | 0.809713 | 1.65E-50 | -1.69E-46 |
| MS.gene050442 | MS.gene92122 | 0.804641 | 1.96E-49 | -1.69E-46 |
| MS.gene050633 | MS.gene92122 | 0.811963 | 5.38E-51 | -1.69E-46 |
| MS.gene052323 | MS.gene92122 | 0.805441 | 1.33E-49 | -1.69E-46 |
| MS.gene054379 | MS.gene92122 | 0.8105 | 1.12E-50 | -1.69E-46 |
| MS.gene054467 | MS.gene92122 | 0.836326 | 9.99E-57 | -1.69E-46 |
| MS.gene054468 | MS.gene92122 | 0.836982 | 6.80E-57 | -1.69E-46 |
| MS.gene054479 | MS.gene92122 | 0.806476 | 8.08E-50 | -1.69E-46 |
| MS.gene055864 | MS.gene92122 | 0.828106 | 1.08E-54 | -1.69E-46 |
| MS.gene056173 | MS.gene92122 | 0.802891 | 4.52E-49 | -1.69E-46 |
| MS.gene056480 | MS.gene92122 | 0.81968 | 1.02E-52 | -1.69E-46 |
| MS.gene057026 | MS.gene92122 | 0.802887 | 4.53E-49 | -1.69E-46 |
| MS.gene058636 | MS.gene92122 | 0.800041 | 1.74E-48 | -1.69E-46 |
| MS.gene05973 | MS.gene92122 | 0.806671 | 7.35E-50 | -1.69E-46 |
| MS.gene060400 | MS.gene92122 | 0.821224 | 4.52E-53 | -1.69E-46 |
| MS.gene06052 | MS.gene92122 | 0.86871 | 5.33E-66 | -1.69E-46 |
| MS.gene060637 | MS.gene92122 | 0.807779 | 4.28E-50 | -1.69E-46 |
| MS.gene06121 | MS.gene92122 | 0.800551 | 1.37E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92122.t1 | MTR_8g028395 | 97.193 | 962 | 27 | 0 | 1 | 962 | 62 | 1023 | 0.0 | 1941 |
| MS.gene92122.t1 | MTR_1g090860 | 41.703 | 928 | 514 | 12 | 35 | 942 | 117 | 1037 | 0.0 | 738 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92122.t1 | AT4G01210 | 59.712 | 973 | 366 | 9 | 1 | 962 | 71 | 1028 | 0.0 | 1181 |
| MS.gene92122.t1 | AT5G04480 | 42.588 | 904 | 488 | 13 | 60 | 942 | 156 | 1049 | 0.0 | 723 |
| MS.gene92122.t1 | AT5G04480 | 42.035 | 904 | 478 | 14 | 60 | 942 | 156 | 1034 | 0.0 | 702 |
Find 220 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGCAACCTCCTGCATTAA+TGG | 0.111874 | 8.3:-65091373 | None:intergenic |
| CTGGAATTATCTTTGCTTAA+AGG | 0.130726 | 8.3:-65088550 | None:intergenic |
| ATTAGAAGCAGATGCATTTA+TGG | 0.137762 | 8.3:+65088378 | MS.gene92122:CDS |
| CAAATTCGACGTATCAAAAT+AGG | 0.189886 | 8.3:+65089787 | MS.gene92122:CDS |
| ACGGGGATACATTATATTTC+TGG | 0.193517 | 8.3:+65091289 | MS.gene92122:CDS |
| CGAGATGTACTAGGTGAATT+TGG | 0.213222 | 8.3:+65090996 | MS.gene92122:CDS |
| TCCTGCATTACACCGGTTTC+CGG | 0.219473 | 8.3:-65092420 | None:intergenic |
| GAGGATTTCGGAGAAGTTTA+AGG | 0.232833 | 8.3:+65085329 | MS.gene92122:CDS |
| TGGCCACAACCAGTGTTTAT+TGG | 0.251752 | 8.3:-65092553 | None:intergenic |
| GCAGGCTTTGTCACCACTTT+TGG | 0.264501 | 8.3:+65088519 | MS.gene92122:CDS |
| GAAATATCAGGAGCAATAAT+TGG | 0.267581 | 8.3:-65088878 | None:intergenic |
| ATACCAAGAAAAGGCATTTC+TGG | 0.280408 | 8.3:-65087898 | None:intergenic |
| ATGGCAGATGTTGTGATATA+TGG | 0.295079 | 8.3:+65088794 | MS.gene92122:CDS |
| GAGCTGTGAAGATGCGTTCT+TGG | 0.295118 | 8.3:+65085238 | MS.gene92122:CDS |
| AGAGATTGGCTACGATATTC+AGG | 0.302902 | 8.3:+65086954 | MS.gene92122:CDS |
| ATGAGAGGGAGAGAAGTTTA+AGG | 0.304691 | 8.3:+65092607 | MS.gene92122:CDS |
| TCAAATGTTTCTTCCTGTTT+CGG | 0.308966 | 8.3:+65085188 | None:intergenic |
| GGCCACAACCAGTGTTTATT+GGG | 0.317679 | 8.3:-65092552 | None:intergenic |
| ATTACCGGCAAGACATAGTT+TGG | 0.319997 | 8.3:-65088184 | None:intergenic |
| TGTGAAGCCTCCACCAGATT+TGG | 0.322661 | 8.3:+65092719 | MS.gene92122:CDS |
| AACCGAACCGGGAAGCGATT+TGG | 0.322908 | 8.3:+65085366 | MS.gene92122:CDS |
| TTAGAGCTTTCTTCCAAATC+TGG | 0.324471 | 8.3:-65092732 | None:intergenic |
| ATATGCTCTATGGTCCCTTT+TGG | 0.336577 | 8.3:-65088737 | None:intergenic |
| TTAAGTTTCTCCACATATTA+CGG | 0.338698 | 8.3:-65087299 | None:intergenic |
| CTTTCCAAACTATGTCTTGC+CGG | 0.342132 | 8.3:+65088180 | MS.gene92122:CDS |
| TTCAATCTGTTGAACCGAAC+CGG | 0.349878 | 8.3:+65085354 | MS.gene92122:CDS |
| AACCAAATCGCTTCCCGGTT+CGG | 0.350066 | 8.3:-65085368 | None:intergenic |
| TTGTACAAGGGCATGTGGTT+GGG | 0.351751 | 8.3:+65088481 | MS.gene92122:CDS |
| TTGCCTCCCATGCCCGTAGA+TGG | 0.352250 | 8.3:+65091552 | MS.gene92122:CDS |
| ATGGCTTTAATCAAAATCTC+TGG | 0.352504 | 8.3:-65088842 | None:intergenic |
| ATCGCGATAATGACATCTTC+TGG | 0.354481 | 8.3:-65088442 | None:intergenic |
| GCCACATCTTTGTTAGAGAT+TGG | 0.356107 | 8.3:+65086940 | MS.gene92122:CDS |
| ATTCATTTGTATATACCATA+TGG | 0.356668 | 8.3:+65089901 | MS.gene92122:CDS |
| CCTGCATTACACCGGTTTCC+GGG | 0.357619 | 8.3:-65092419 | None:intergenic |
| AGAACTCTAATGTTATCCTT+AGG | 0.366948 | 8.3:-65089525 | None:intergenic |
| CTTGGATTGGATTTCAGTCT+TGG | 0.367794 | 8.3:+65091066 | MS.gene92122:CDS |
| GCATTTATGAACCGTACGTT+GGG | 0.369771 | 8.3:+65090667 | MS.gene92122:CDS |
| TCTATAACCAAATCGCTTCC+CGG | 0.371968 | 8.3:-65085373 | None:intergenic |
| ACCCTTCACAGAAAGACTTT+TGG | 0.372816 | 8.3:+65091337 | MS.gene92122:CDS |
| TCAAGTCCATACCTCTTGTA+TGG | 0.377143 | 8.3:+65088047 | MS.gene92122:CDS |
| GAATCTTCGACAACCGAAAC+AGG | 0.384577 | 8.3:-65085201 | None:intergenic |
| TGTACAAGGGCATGTGGTTG+GGG | 0.390090 | 8.3:+65088482 | MS.gene92122:CDS |
| TCTTAGACAAATCATGTTAG+AGG | 0.390886 | 8.3:+65089545 | MS.gene92122:CDS |
| GCTCGGAACATTGCCTCAAT+GGG | 0.391563 | 8.3:+65089597 | MS.gene92122:CDS |
| CGACATCGACAACAAGTAAT+CGG | 0.395243 | 8.3:+65092690 | MS.gene92122:CDS |
| CCGCCTTTGCCATTGCAAAC+AGG | 0.409018 | 8.3:+65091021 | MS.gene92122:CDS |
| TGTGATATATGGGTCCTTGC+TGG | 0.409461 | 8.3:+65088805 | MS.gene92122:CDS |
| CTTTACTTCAGAACATTCTC+AGG | 0.412356 | 8.3:+65089673 | MS.gene92122:CDS |
| TTTCTGATCATAGAAATATC+AGG | 0.414616 | 8.3:-65088890 | None:intergenic |
| GGCTCGGAACATTGCCTCAA+TGG | 0.414731 | 8.3:+65089596 | MS.gene92122:CDS |
| TGATTCACAACAATTGCTAA+TGG | 0.415244 | 8.3:+65086909 | MS.gene92122:CDS |
| CATGGTCTGTCATGCTGAGT+TGG | 0.417197 | 8.3:+65091580 | MS.gene92122:CDS |
| CACTGGTTGTGGCCATCAAC+CGG | 0.420363 | 8.3:+65092561 | MS.gene92122:CDS |
| ATCTCCAGCTATATGCTCTA+TGG | 0.420929 | 8.3:-65088747 | None:intergenic |
| ATGTTAGAGGTGATCTCAAA+AGG | 0.430983 | 8.3:+65089558 | MS.gene92122:CDS |
| AAATTCGACGTATCAAAATA+GGG | 0.431205 | 8.3:+65089788 | MS.gene92122:CDS |
| GAACTCTAATGTTATCCTTA+GGG | 0.437658 | 8.3:-65089524 | None:intergenic |
| ATGGTCTGTCATGCTGAGTT+GGG | 0.438199 | 8.3:+65091581 | MS.gene92122:CDS |
| CGGGGATACATTATATTTCT+GGG | 0.442919 | 8.3:+65091290 | MS.gene92122:CDS |
| TCTGGCAAAGGTCGAAGGCC+AGG | 0.449196 | 8.3:+65090918 | MS.gene92122:CDS |
| GATAATTTGCGCATCAGAAT+GGG | 0.450695 | 8.3:+65088412 | MS.gene92122:CDS |
| TAGAGTTTGTGATGTTCTCC+AGG | 0.452937 | 8.3:+65091625 | MS.gene92122:CDS |
| AAGAACTGCTAAGAACCTTA+TGG | 0.454177 | 8.3:+65089623 | MS.gene92122:CDS |
| GAGGTAAAATGTGGATCAAA+TGG | 0.454661 | 8.3:+65092466 | MS.gene92122:CDS |
| AGAGATCTTTGATGTAGAAA+AGG | 0.457176 | 8.3:-65090702 | None:intergenic |
| AAATAACTACAGTGTGGCTC+TGG | 0.457212 | 8.3:+65088612 | MS.gene92122:CDS |
| GATATTTCTGAAACCGCCTT+AGG | 0.462019 | 8.3:-65089717 | None:intergenic |
| ATCATTCAAGACAGTGCTCT+TGG | 0.463289 | 8.3:+65088070 | MS.gene92122:CDS |
| CGTACGTTGGGGAAGGAGCC+TGG | 0.465268 | 8.3:+65090679 | MS.gene92122:CDS |
| TTTGTACAAGGGCATGTGGT+TGG | 0.465371 | 8.3:+65088480 | MS.gene92122:CDS |
| GAGGAGAATGTATGGGGTAC+AGG | 0.465906 | 8.3:+65091515 | MS.gene92122:CDS |
| TACGGTTCATAAATGCTTAG+TGG | 0.466643 | 8.3:-65090660 | None:intergenic |
| CAATTGCTTCGGATACCATA+AGG | 0.467841 | 8.3:-65089638 | None:intergenic |
| TGTTTCGGTTGTCGAAGATT+CGG | 0.470780 | 8.3:+65085203 | MS.gene92122:CDS |
| TGCATATCCATCAATTGCTT+CGG | 0.471101 | 8.3:-65089649 | None:intergenic |
| CAGAGCAGTCACACGGAACA+TGG | 0.474531 | 8.3:+65090547 | MS.gene92122:CDS |
| CTTTCTTCCAAATCTGGTGG+AGG | 0.475659 | 8.3:-65092726 | None:intergenic |
| GTATTTGTGAACCCGGAAAC+CGG | 0.478011 | 8.3:+65092408 | MS.gene92122:CDS |
| ATAAATATCATACCAAGAAA+AGG | 0.478285 | 8.3:-65087907 | None:intergenic |
| AGATAATTTGCGCATCAGAA+TGG | 0.478457 | 8.3:+65088411 | MS.gene92122:CDS |
| TAGGTTGATGACAGGGTGAA+TGG | 0.478461 | 8.3:+65089492 | MS.gene92122:intron |
| TTCATTTGTATATACCATAT+GGG | 0.478789 | 8.3:+65089902 | MS.gene92122:CDS |
| GAAGCGATGAGGAGAATGTA+TGG | 0.479125 | 8.3:+65091507 | MS.gene92122:CDS |
| ATGGTATCCGAAGCAATTGA+TGG | 0.482150 | 8.3:+65089642 | MS.gene92122:CDS |
| AGACCATGTGTCACCATCTA+CGG | 0.483630 | 8.3:-65091565 | None:intergenic |
| ACCAAAAGTCTTTCTGTGAA+GGG | 0.484824 | 8.3:-65091338 | None:intergenic |
| TAGATAAATACGAAGACCGT+TGG | 0.487438 | 8.3:+65089832 | MS.gene92122:CDS |
| CCCCTCATGTTAAAGAAAAG+TGG | 0.487821 | 8.3:+65089739 | MS.gene92122:CDS |
| TTGAGCTTCTTGTAAACGTG+TGG | 0.491219 | 8.3:+65092361 | MS.gene92122:CDS |
| TCTTTATCGCGGAGTTTCCC+TGG | 0.492885 | 8.3:+65090722 | MS.gene92122:CDS |
| CAGAGCTTGAAATATCCAAA+AGG | 0.493588 | 8.3:+65088722 | MS.gene92122:CDS |
| GACCAAAAGTCTTTCTGTGA+AGG | 0.494411 | 8.3:-65091339 | None:intergenic |
| GCTTATTATCGAGATGTACT+AGG | 0.497421 | 8.3:+65090987 | MS.gene92122:CDS |
| CCCGGAAACCGGTGTAATGC+AGG | 0.500427 | 8.3:+65092419 | MS.gene92122:CDS |
| TCTTTCTGTGAAGGGTTTCG+CGG | 0.504740 | 8.3:-65091330 | None:intergenic |
| TCTGCTTCTAATGCTTCAGC+AGG | 0.505298 | 8.3:-65088367 | None:intergenic |
| ATCAGAGGTTGCTCCTCCTA+AGG | 0.505987 | 8.3:+65089701 | MS.gene92122:CDS |
| TAGAAAACCTCAGTTGGCAT+TGG | 0.506230 | 8.3:+65085392 | MS.gene92122:CDS |
| AATGCTTCAGCAGGGGAACC+AGG | 0.508054 | 8.3:-65088358 | None:intergenic |
| ATTATATTTCTGGGTGCGGA+TGG | 0.509950 | 8.3:+65091299 | MS.gene92122:CDS |
| TCAATCTGTTGAACCGAACC+GGG | 0.510873 | 8.3:+65085355 | MS.gene92122:CDS |
| AGATGTCATTATCGCGATTG+TGG | 0.512339 | 8.3:+65088447 | MS.gene92122:CDS |
| GAAACGCAAAGAAAGCTGAT+AGG | 0.516455 | 8.3:+65090583 | MS.gene92122:CDS |
| TTAGGAGGAGCAACCTCTGA+TGG | 0.520076 | 8.3:-65089699 | None:intergenic |
| GGAAAATATCACCCTTGGCT+CGG | 0.520430 | 8.3:+65089580 | MS.gene92122:CDS |
| GCATTAACTAGGTTGATGAC+AGG | 0.521338 | 8.3:+65089484 | MS.gene92122:intron |
| TGAGGCAATGTTCCGAGCCA+AGG | 0.526932 | 8.3:-65089592 | None:intergenic |
| AATGATCCATACAAGAGGTA+TGG | 0.526952 | 8.3:-65088053 | None:intergenic |
| GATGGAGAGCTTGAGCGGAC+TGG | 0.527406 | 8.3:+65090633 | MS.gene92122:CDS |
| TGGTTATAGAAAACCTCAGT+TGG | 0.528095 | 8.3:+65085386 | MS.gene92122:CDS |
| CATTCTCAGGCTTCCATCAG+AGG | 0.528749 | 8.3:+65089686 | MS.gene92122:CDS |
| CATCCTCCTTGCGCTGTGGT+AGG | 0.531118 | 8.3:-65092385 | None:intergenic |
| TTTCTGGGTGCGGATGGATA+CGG | 0.531157 | 8.3:+65091305 | MS.gene92122:CDS |
| ATACATTATATTTCTGGGTG+CGG | 0.533401 | 8.3:+65091295 | MS.gene92122:CDS |
| GACCATGTGTCACCATCTAC+GGG | 0.533729 | 8.3:-65091564 | None:intergenic |
| TGTTAGAGGTGATCTCAAAA+GGG | 0.534000 | 8.3:+65089559 | MS.gene92122:CDS |
| TTGGAGAGCAACAGCAAGGA+AGG | 0.534391 | 8.3:+65091085 | MS.gene92122:CDS |
| AGCAGTTCTTCTCCCCATTG+AGG | 0.534477 | 8.3:-65089610 | None:intergenic |
| CAGAATGTTTGTAGATGCAC+TGG | 0.535442 | 8.3:+65091771 | MS.gene92122:intron |
| AGCTGAGTTATCAGATTCTG+AGG | 0.535762 | 8.3:+65092527 | MS.gene92122:CDS |
| ATGGACCGGGCCGTAATATG+TGG | 0.536386 | 8.3:+65087289 | MS.gene92122:CDS |
| CAGGCTCCTTCCCCAACGTA+CGG | 0.537128 | 8.3:-65090678 | None:intergenic |
| GATGTCATTATCGCGATTGT+GGG | 0.537242 | 8.3:+65088448 | MS.gene92122:CDS |
| ATCCCAATAAACACTGGTTG+TGG | 0.537370 | 8.3:+65092550 | MS.gene92122:CDS |
| GACATCGACAACAAGTAATC+GGG | 0.538295 | 8.3:+65092691 | MS.gene92122:CDS |
| CTGTCCTTTGAGTTTGTCGA+AGG | 0.542286 | 8.3:+65091831 | MS.gene92122:CDS |
| GAGCTTTCTTCCAAATCTGG+TGG | 0.543362 | 8.3:-65092729 | None:intergenic |
| AGCATTTATGAACCGTACGT+TGG | 0.544194 | 8.3:+65090666 | MS.gene92122:CDS |
| TGTGTCACCATCTACGGGCA+TGG | 0.544387 | 8.3:-65091559 | None:intergenic |
| AAAAGGGAAAATATCACCCT+TGG | 0.545228 | 8.3:+65089575 | MS.gene92122:CDS |
| TTTGGCAAGGTTTATATGAG+AGG | 0.546690 | 8.3:+65092592 | MS.gene92122:CDS |
| GATGATTCGTAGTTGCGCAC+TGG | 0.548354 | 8.3:-65088569 | None:intergenic |
| TGGCTTTAATCAAAATCTCT+GGG | 0.548494 | 8.3:-65088841 | None:intergenic |
| AAAATTTCCGGCATCAAATG+TGG | 0.548959 | 8.3:-65088326 | None:intergenic |
| GGGACCATAGAGCATATAGC+TGG | 0.549399 | 8.3:+65088743 | MS.gene92122:CDS |
| TTGGCAAGGTTTATATGAGA+GGG | 0.550339 | 8.3:+65092593 | MS.gene92122:CDS |
| TGAGCTTCTTGTAAACGTGT+GGG | 0.551828 | 8.3:+65092362 | MS.gene92122:CDS |
| TAATAAGCATTGTTAAGCAA+TGG | 0.553372 | 8.3:-65090972 | None:intergenic |
| TATGAACCGTACGTTGGGGA+AGG | 0.556112 | 8.3:+65090672 | MS.gene92122:CDS |
| ATTTCTGAAACCGCCTTAGG+AGG | 0.556834 | 8.3:-65089714 | None:intergenic |
| CAAACTCAAAGGACAGTGTC+CGG | 0.559268 | 8.3:-65091824 | None:intergenic |
| TCTTTGATGTAGAAAAGGCC+AGG | 0.561427 | 8.3:-65090697 | None:intergenic |
| TTAAACTTCTCCGAAATCCT+CGG | 0.563805 | 8.3:-65085327 | None:intergenic |
| TGGCAGATGTTGTGATATAT+GGG | 0.565269 | 8.3:+65088795 | MS.gene92122:CDS |
| TCAAGACAATATACCGCTAG+TGG | 0.566079 | 8.3:+65088100 | MS.gene92122:CDS |
| GGGCATGGGAGGCAAAGAAT+CGG | 0.567837 | 8.3:-65091544 | None:intergenic |
| TGCGATTCCATTAATGCAGG+AGG | 0.570143 | 8.3:+65091366 | MS.gene92122:CDS |
| CACAGTCTGGCAAAGGTCGA+AGG | 0.570214 | 8.3:+65090913 | MS.gene92122:intron |
| GTGTCACCATCTACGGGCAT+GGG | 0.571564 | 8.3:-65091558 | None:intergenic |
| CTGGCAAAGGTCGAAGGCCA+GGG | 0.572173 | 8.3:+65090919 | MS.gene92122:CDS |
| AAGCGATGAGGAGAATGTAT+GGG | 0.573370 | 8.3:+65091508 | MS.gene92122:CDS |
| CCTGTTTGCAATGGCAAAGG+CGG | 0.573462 | 8.3:-65091021 | None:intergenic |
| AGGACAAGCACTGCTACTCA+AGG | 0.574453 | 8.3:+65092334 | MS.gene92122:intron |
| CCTCATCGCTTCTGAGAAAG+CGG | 0.578187 | 8.3:-65091496 | None:intergenic |
| CTACCACAGCGCAAGGAGGA+TGG | 0.579052 | 8.3:+65092386 | MS.gene92122:CDS |
| ATATACTCCACATTTGATGC+CGG | 0.579087 | 8.3:+65088319 | MS.gene92122:CDS |
| CTACGAATCATCGTTCATAG+TGG | 0.580403 | 8.3:+65088580 | MS.gene92122:CDS |
| AAAGGAAAATCTGCCAAAAG+TGG | 0.583261 | 8.3:-65088532 | None:intergenic |
| ATGTTAAAGAAAAGTGGCAG+TGG | 0.584460 | 8.3:+65089745 | MS.gene92122:CDS |
| AGAAGAAAAGTATATTCAGA+AGG | 0.588194 | 8.3:+65089926 | MS.gene92122:CDS |
| AGACGGACAACACTGTAGAC+TGG | 0.588612 | 8.3:+65087355 | MS.gene92122:CDS |
| TTTCTCCACATATTACGGCC+CGG | 0.588929 | 8.3:-65087294 | None:intergenic |
| TGTGGGCCTACCACAGCGCA+AGG | 0.590873 | 8.3:+65092379 | MS.gene92122:CDS |
| GAGGCAATGTTCCGAGCCAA+GGG | 0.592243 | 8.3:-65089591 | None:intergenic |
| AGAGCTTGAAATATCCAAAA+GGG | 0.592788 | 8.3:+65088723 | MS.gene92122:CDS |
| GCATCAAAATCATCTCTCCC+TGG | 0.592807 | 8.3:-65090936 | None:intergenic |
| CACAAGTTCAAGAGCCGTAG+AGG | 0.593174 | 8.3:+65092447 | MS.gene92122:CDS |
| GTGTTGTTCCTGCATTACAC+CGG | 0.593994 | 8.3:-65092427 | None:intergenic |
| ACGATCAATCCTGTTTGCAA+TGG | 0.595857 | 8.3:-65091030 | None:intergenic |
| TAACTACAGTGTGGCTCTGG+AGG | 0.598529 | 8.3:+65088615 | MS.gene92122:CDS |
| TGCAGATTCTGTTCTCAGCA+TGG | 0.599563 | 8.3:+65088775 | MS.gene92122:CDS |
| TCACCATCTACGGGCATGGG+AGG | 0.602080 | 8.3:-65091555 | None:intergenic |
| ACATGTTCACAGTCTGGCAA+AGG | 0.602310 | 8.3:+65090906 | MS.gene92122:intron |
| AATTGGTTTCTCGAAGCACA+TGG | 0.602803 | 8.3:-65088861 | None:intergenic |
| TTACAACACACTGAAGAACA+TGG | 0.603274 | 8.3:+65092494 | MS.gene92122:CDS |
| AATCCTGTTTGCAATGGCAA+AGG | 0.604520 | 8.3:-65091024 | None:intergenic |
| GGAGAGAAGTTTAAGGCACA+AGG | 0.605935 | 8.3:+65092614 | MS.gene92122:CDS |
| GGCACAAGGAGAAAGAAAAG+AGG | 0.606007 | 8.3:+65092628 | MS.gene92122:CDS |
| GAGACGATGGAGAGCTTGAG+CGG | 0.607041 | 8.3:+65090628 | MS.gene92122:CDS |
| TTAAGCAATGGAAGACGAGA+AGG | 0.609691 | 8.3:-65090960 | None:intergenic |
| TATTAAAACTCGTGACAAGA+CGG | 0.610904 | 8.3:+65087338 | MS.gene92122:CDS |
| GTCACCTTCGACAAACTCAA+AGG | 0.616958 | 8.3:-65091835 | None:intergenic |
| AGTCTTGGAGAGCAACAGCA+AGG | 0.617660 | 8.3:+65091081 | MS.gene92122:CDS |
| CACACTGAAGAACATGGATG+AGG | 0.619414 | 8.3:+65092500 | MS.gene92122:CDS |
| CATTAACTAGGTTGATGACA+GGG | 0.620671 | 8.3:+65089485 | MS.gene92122:intron |
| GAAAGACTGCTCTTCCAGCA+AGG | 0.621550 | 8.3:-65088819 | None:intergenic |
| GAGGATGGTATTTGTGAACC+CGG | 0.621629 | 8.3:+65092401 | MS.gene92122:CDS |
| AGAGGTTGCTCCTCCTAAGG+CGG | 0.622561 | 8.3:+65089704 | MS.gene92122:CDS |
| CTGAGGATCCCAATAAACAC+TGG | 0.623324 | 8.3:+65092544 | MS.gene92122:CDS |
| CACTTTGCATCATAGTGATG+AGG | 0.624790 | 8.3:+65085263 | MS.gene92122:CDS |
| ACAAGAGGTATGGACTTGAA+AGG | 0.625059 | 8.3:-65088043 | None:intergenic |
| TTGCGCATCAGAATGGGCTA+CGG | 0.627483 | 8.3:+65088418 | MS.gene92122:CDS |
| GCCAATCTCTAACAAAGATG+TGG | 0.628553 | 8.3:-65086941 | None:intergenic |
| TGCTTCTAATGCTTCAGCAG+GGG | 0.630300 | 8.3:-65088365 | None:intergenic |
| TATGATGAACATCATTCCAC+CGG | 0.630963 | 8.3:+65091805 | MS.gene92122:CDS |
| CTGCTTCTAATGCTTCAGCA+GGG | 0.632700 | 8.3:-65088366 | None:intergenic |
| GGACAAGCACTGCTACTCAA+GGG | 0.633281 | 8.3:+65092335 | MS.gene92122:intron |
| CATTTATGAACCGTACGTTG+GGG | 0.634494 | 8.3:+65090668 | MS.gene92122:CDS |
| CAAGACAATATACCGCTAGT+GGG | 0.637642 | 8.3:+65088101 | MS.gene92122:CDS |
| GAGGAGTATGTGTTAGACAT+TGG | 0.638600 | 8.3:+65085282 | MS.gene92122:CDS |
| TCTTGAATGATCCATACAAG+AGG | 0.641710 | 8.3:-65088058 | None:intergenic |
| AGAGCAGTCACACGGAACAT+GGG | 0.644057 | 8.3:+65090548 | MS.gene92122:CDS |
| TGCCCGTAGATGGTGACACA+TGG | 0.646414 | 8.3:+65091562 | MS.gene92122:CDS |
| AAGTTCAATCTTCCCACTAG+CGG | 0.648000 | 8.3:-65088113 | None:intergenic |
| CCGCTTTCTCAGAAGCGATG+AGG | 0.650880 | 8.3:+65091496 | MS.gene92122:CDS |
| GATTTACACGAAAGAGACGA+TGG | 0.651159 | 8.3:+65090615 | MS.gene92122:CDS |
| CATCAAAGATCTCTTTATCG+CGG | 0.658337 | 8.3:+65090711 | MS.gene92122:CDS |
| AGAGCCGTAGAGGTAAAATG+TGG | 0.658391 | 8.3:+65092457 | MS.gene92122:CDS |
| GCAGTCACACGGAACATGGG+AGG | 0.664656 | 8.3:+65090551 | MS.gene92122:CDS |
| ATACCATCCTCCTTGCGCTG+TGG | 0.665035 | 8.3:-65092389 | None:intergenic |
| AGCGATGAGGAGAATGTATG+GGG | 0.668638 | 8.3:+65091509 | MS.gene92122:CDS |
| TAGCGGTATATTGTCTTGAG+CGG | 0.669578 | 8.3:-65088096 | None:intergenic |
| GATAGAACAGAGCAGTCACA+CGG | 0.676025 | 8.3:+65090540 | MS.gene92122:CDS |
| ACTCAAAGGACAGTGTCCGG+TGG | 0.677184 | 8.3:-65091821 | None:intergenic |
| GAACTAACCAATGCCAACTG+AGG | 0.684691 | 8.3:-65085399 | None:intergenic |
| TGACAAAGCCTGCAAAACAA+CGG | 0.688487 | 8.3:-65088509 | None:intergenic |
| CTCGGAACATTGCCTCAATG+GGG | 0.695600 | 8.3:+65089598 | MS.gene92122:CDS |
| GTATGTGTTAGACATTGGTG+AGG | 0.709592 | 8.3:+65085287 | MS.gene92122:CDS |
| GGGCCTACCACAGCGCAAGG+AGG | 0.724672 | 8.3:+65092382 | MS.gene92122:CDS |
| GTTAACAAATAACTACAGTG+TGG | 0.732246 | 8.3:+65088606 | MS.gene92122:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 65085192 | 65092776 | 65085192 | ID=MS.gene92122 |
| chr8.3 | mRNA | 65085192 | 65092776 | 65085192 | ID=MS.gene92122.t1;Parent=MS.gene92122 |
| chr8.3 | exon | 65085192 | 65085413 | 65085192 | ID=MS.gene92122.t1.exon1;Parent=MS.gene92122.t1 |
| chr8.3 | CDS | 65085192 | 65085413 | 65085192 | ID=cds.MS.gene92122.t1;Parent=MS.gene92122.t1 |
| chr8.3 | exon | 65086889 | 65086975 | 65086889 | ID=MS.gene92122.t1.exon2;Parent=MS.gene92122.t1 |
| chr8.3 | CDS | 65086889 | 65086975 | 65086889 | ID=cds.MS.gene92122.t1;Parent=MS.gene92122.t1 |
| chr8.3 | exon | 65087273 | 65087382 | 65087273 | ID=MS.gene92122.t1.exon3;Parent=MS.gene92122.t1 |
| chr8.3 | CDS | 65087273 | 65087382 | 65087273 | ID=cds.MS.gene92122.t1;Parent=MS.gene92122.t1 |
| chr8.3 | exon | 65087866 | 65087916 | 65087866 | ID=MS.gene92122.t1.exon4;Parent=MS.gene92122.t1 |
| chr8.3 | CDS | 65087866 | 65087916 | 65087866 | ID=cds.MS.gene92122.t1;Parent=MS.gene92122.t1 |
| chr8.3 | exon | 65088030 | 65088201 | 65088030 | ID=MS.gene92122.t1.exon5;Parent=MS.gene92122.t1 |
| chr8.3 | CDS | 65088030 | 65088201 | 65088030 | ID=cds.MS.gene92122.t1;Parent=MS.gene92122.t1 |
| chr8.3 | exon | 65088316 | 65088636 | 65088316 | ID=MS.gene92122.t1.exon6;Parent=MS.gene92122.t1 |
| chr8.3 | CDS | 65088316 | 65088636 | 65088316 | ID=cds.MS.gene92122.t1;Parent=MS.gene92122.t1 |
| chr8.3 | exon | 65088713 | 65088916 | 65088713 | ID=MS.gene92122.t1.exon7;Parent=MS.gene92122.t1 |
| chr8.3 | CDS | 65088713 | 65088916 | 65088713 | ID=cds.MS.gene92122.t1;Parent=MS.gene92122.t1 |
| chr8.3 | exon | 65089495 | 65089980 | 65089495 | ID=MS.gene92122.t1.exon8;Parent=MS.gene92122.t1 |
| chr8.3 | CDS | 65089495 | 65089980 | 65089495 | ID=cds.MS.gene92122.t1;Parent=MS.gene92122.t1 |
| chr8.3 | exon | 65090534 | 65090743 | 65090534 | ID=MS.gene92122.t1.exon9;Parent=MS.gene92122.t1 |
| chr8.3 | CDS | 65090534 | 65090743 | 65090534 | ID=cds.MS.gene92122.t1;Parent=MS.gene92122.t1 |
| chr8.3 | exon | 65090918 | 65091106 | 65090918 | ID=MS.gene92122.t1.exon10;Parent=MS.gene92122.t1 |
| chr8.3 | CDS | 65090918 | 65091106 | 65090918 | ID=cds.MS.gene92122.t1;Parent=MS.gene92122.t1 |
| chr8.3 | exon | 65091231 | 65091394 | 65091231 | ID=MS.gene92122.t1.exon11;Parent=MS.gene92122.t1 |
| chr8.3 | CDS | 65091231 | 65091394 | 65091231 | ID=cds.MS.gene92122.t1;Parent=MS.gene92122.t1 |
| chr8.3 | exon | 65091494 | 65091646 | 65091494 | ID=MS.gene92122.t1.exon12;Parent=MS.gene92122.t1 |
| chr8.3 | CDS | 65091494 | 65091646 | 65091494 | ID=cds.MS.gene92122.t1;Parent=MS.gene92122.t1 |
| chr8.3 | exon | 65091774 | 65091852 | 65091774 | ID=MS.gene92122.t1.exon13;Parent=MS.gene92122.t1 |
| chr8.3 | CDS | 65091774 | 65091852 | 65091774 | ID=cds.MS.gene92122.t1;Parent=MS.gene92122.t1 |
| chr8.3 | exon | 65092336 | 65092776 | 65092336 | ID=MS.gene92122.t1.exon14;Parent=MS.gene92122.t1 |
| chr8.3 | CDS | 65092336 | 65092776 | 65092336 | ID=cds.MS.gene92122.t1;Parent=MS.gene92122.t1 |
| Gene Sequence |
| Protein sequence |
