Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060400.t1 | XP_003594970.1 | 98.7 | 319 | 3 | 1 | 1 | 319 | 1 | 318 | 2.00E-168 | 601.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060400.t1 | Q40784 | 72.7 | 304 | 83 | 0 | 15 | 318 | 26 | 329 | 2.6e-132 | 473.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060400.t1 | G7IN18 | 98.7 | 319 | 3 | 1 | 1 | 319 | 1 | 318 | 1.5e-168 | 601.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene060400 | 0.807484 | 4.94E-50 | -1.69E-46 |
| MS.gene050361 | MS.gene060400 | 0.818143 | 2.29E-52 | -1.69E-46 |
| MS.gene050556 | MS.gene060400 | 0.818383 | 2.02E-52 | -1.69E-46 |
| MS.gene050762 | MS.gene060400 | 0.805226 | 1.48E-49 | -1.69E-46 |
| MS.gene050763 | MS.gene060400 | 0.803342 | 3.65E-49 | -1.69E-46 |
| MS.gene052609 | MS.gene060400 | 0.836727 | 7.90E-57 | -1.69E-46 |
| MS.gene052776 | MS.gene060400 | 0.811817 | 5.79E-51 | -1.69E-46 |
| MS.gene052932 | MS.gene060400 | 0.834625 | 2.69E-56 | -1.69E-46 |
| MS.gene052994 | MS.gene060400 | 0.800056 | 1.72E-48 | -1.69E-46 |
| MS.gene053167 | MS.gene060400 | 0.800176 | 1.63E-48 | -1.69E-46 |
| MS.gene054379 | MS.gene060400 | 0.801699 | 7.96E-49 | -1.69E-46 |
| MS.gene055864 | MS.gene060400 | 0.807356 | 5.26E-50 | -1.69E-46 |
| MS.gene056181 | MS.gene060400 | 0.805195 | 1.50E-49 | -1.69E-46 |
| MS.gene057625 | MS.gene060400 | 0.821464 | 3.98E-53 | -1.69E-46 |
| MS.gene058289 | MS.gene060400 | 0.81799 | 2.48E-52 | -1.69E-46 |
| MS.gene058638 | MS.gene060400 | 0.858752 | 6.64E-63 | -1.69E-46 |
| MS.gene058639 | MS.gene060400 | 0.857068 | 2.10E-62 | -1.69E-46 |
| MS.gene058758 | MS.gene060400 | 0.808156 | 3.56E-50 | -1.69E-46 |
| MS.gene060400 | MS.gene06133 | 0.805581 | 1.25E-49 | -1.69E-46 |
| MS.gene060400 | MS.gene061958 | 0.802168 | 6.38E-49 | -1.69E-46 |
| MS.gene060400 | MS.gene064336 | 0.805914 | 1.06E-49 | -1.69E-46 |
| MS.gene060400 | MS.gene065593 | 0.855742 | 5.14E-62 | -1.69E-46 |
| MS.gene060400 | MS.gene065908 | 0.802851 | 4.61E-49 | -1.69E-46 |
| MS.gene060400 | MS.gene065934 | 0.805493 | 1.30E-49 | -1.69E-46 |
| MS.gene060400 | MS.gene066047 | 0.837914 | 3.92E-57 | -1.69E-46 |
| MS.gene060400 | MS.gene066897 | 0.807631 | 4.60E-50 | -1.69E-46 |
| MS.gene060400 | MS.gene069690 | 0.82649 | 2.64E-54 | -1.69E-46 |
| MS.gene060400 | MS.gene071699 | 0.840472 | 8.52E-58 | -1.69E-46 |
| MS.gene060400 | MS.gene071779 | 0.801837 | 7.46E-49 | -1.69E-46 |
| MS.gene060400 | MS.gene072564 | 0.800798 | 1.22E-48 | -1.69E-46 |
| MS.gene060400 | MS.gene072709 | 0.801434 | 9.02E-49 | -1.69E-46 |
| MS.gene060400 | MS.gene073390 | 0.819636 | 1.05E-52 | -1.69E-46 |
| MS.gene060400 | MS.gene23963 | 0.818923 | 1.52E-52 | -1.69E-46 |
| MS.gene060400 | MS.gene24417 | 0.807288 | 5.44E-50 | -1.69E-46 |
| MS.gene060400 | MS.gene25174 | 0.815443 | 9.22E-52 | -1.69E-46 |
| MS.gene060400 | MS.gene25469 | 0.810058 | 1.39E-50 | -1.69E-46 |
| MS.gene060400 | MS.gene25471 | 0.807893 | 4.05E-50 | -1.69E-46 |
| MS.gene060400 | MS.gene27026 | 0.801617 | 8.28E-49 | -1.69E-46 |
| MS.gene060400 | MS.gene27287 | 0.813257 | 2.81E-51 | -1.69E-46 |
| MS.gene060400 | MS.gene27401 | 0.80737 | 5.23E-50 | -1.69E-46 |
| MS.gene060400 | MS.gene29041 | 0.813228 | 2.85E-51 | -1.69E-46 |
| MS.gene060400 | MS.gene29209 | 0.80586 | 1.09E-49 | -1.69E-46 |
| MS.gene060400 | MS.gene29361 | 0.839963 | 1.16E-57 | -1.69E-46 |
| MS.gene060400 | MS.gene32657 | 0.81321 | 2.87E-51 | -1.69E-46 |
| MS.gene060400 | MS.gene32863 | 0.805235 | 1.47E-49 | -1.69E-46 |
| MS.gene060400 | MS.gene32884 | 0.80928 | 2.05E-50 | -1.69E-46 |
| MS.gene060400 | MS.gene34453 | 0.814703 | 1.35E-51 | -1.69E-46 |
| MS.gene060400 | MS.gene34485 | 0.816953 | 4.24E-52 | -1.69E-46 |
| MS.gene060400 | MS.gene34691 | 0.815573 | 8.63E-52 | -1.69E-46 |
| MS.gene060400 | MS.gene36567 | 0.817952 | 2.53E-52 | -1.69E-46 |
| MS.gene060400 | MS.gene37468 | 0.800561 | 1.36E-48 | -1.69E-46 |
| MS.gene060400 | MS.gene37876 | 0.805938 | 1.05E-49 | -1.69E-46 |
| MS.gene060400 | MS.gene38378 | 0.811071 | 8.41E-51 | -1.69E-46 |
| MS.gene060400 | MS.gene40006 | 0.803185 | 3.93E-49 | -1.69E-46 |
| MS.gene060400 | MS.gene40093 | 0.816282 | 5.99E-52 | -1.69E-46 |
| MS.gene060400 | MS.gene40877 | 0.820138 | 8.03E-53 | -1.69E-46 |
| MS.gene060400 | MS.gene41427 | 0.816269 | 6.03E-52 | -1.69E-46 |
| MS.gene060400 | MS.gene42528 | 0.808182 | 3.51E-50 | -1.69E-46 |
| MS.gene060400 | MS.gene44427 | 0.831225 | 1.88E-55 | -1.69E-46 |
| MS.gene060400 | MS.gene46910 | 0.801365 | 9.32E-49 | -1.69E-46 |
| MS.gene060400 | MS.gene47554 | 0.80973 | 1.64E-50 | -1.69E-46 |
| MS.gene060400 | MS.gene47695 | 0.816597 | 5.10E-52 | -1.69E-46 |
| MS.gene060400 | MS.gene47747 | 0.828152 | 1.05E-54 | -1.69E-46 |
| MS.gene060400 | MS.gene48283 | 0.82763 | 1.41E-54 | -1.69E-46 |
| MS.gene060400 | MS.gene50365 | 0.809434 | 1.90E-50 | -1.69E-46 |
| MS.gene060400 | MS.gene51028 | 0.805962 | 1.04E-49 | -1.69E-46 |
| MS.gene060400 | MS.gene51029 | 0.821624 | 3.66E-53 | -1.69E-46 |
| MS.gene060400 | MS.gene52956 | 0.838012 | 3.70E-57 | -1.69E-46 |
| MS.gene060400 | MS.gene53552 | 0.803131 | 4.04E-49 | -1.69E-46 |
| MS.gene060400 | MS.gene55717 | 0.812026 | 5.21E-51 | -1.69E-46 |
| MS.gene060400 | MS.gene58053 | 0.802303 | 5.98E-49 | -1.69E-46 |
| MS.gene060400 | MS.gene58134 | 0.833549 | 5.00E-56 | -1.69E-46 |
| MS.gene060400 | MS.gene58617 | 0.8274 | 1.60E-54 | -1.69E-46 |
| MS.gene060400 | MS.gene58763 | 0.811068 | 8.42E-51 | -1.69E-46 |
| MS.gene060400 | MS.gene59366 | 0.852696 | 3.90E-61 | -1.69E-46 |
| MS.gene060400 | MS.gene60144 | 0.842725 | 2.17E-58 | -1.69E-46 |
| MS.gene060400 | MS.gene62501 | 0.817733 | 2.83E-52 | -1.69E-46 |
| MS.gene060400 | MS.gene63961 | 0.809279 | 2.05E-50 | -1.69E-46 |
| MS.gene060400 | MS.gene65300 | 0.807866 | 4.10E-50 | -1.69E-46 |
| MS.gene060400 | MS.gene67553 | 0.811527 | 6.70E-51 | -1.69E-46 |
| MS.gene060400 | MS.gene69097 | 0.80888 | 2.49E-50 | -1.69E-46 |
| MS.gene060400 | MS.gene70383 | 0.802966 | 4.37E-49 | -1.69E-46 |
| MS.gene060400 | MS.gene73340 | 0.849714 | 2.71E-60 | -1.69E-46 |
| MS.gene060400 | MS.gene77647 | 0.822828 | 1.92E-53 | -1.69E-46 |
| MS.gene060400 | MS.gene79797 | 0.816002 | 6.92E-52 | -1.69E-46 |
| MS.gene060400 | MS.gene80233 | 0.804908 | 1.72E-49 | -1.69E-46 |
| MS.gene060400 | MS.gene82806 | 0.813821 | 2.11E-51 | -1.69E-46 |
| MS.gene060400 | MS.gene82989 | 0.82908 | 6.29E-55 | -1.69E-46 |
| MS.gene060400 | MS.gene83689 | 0.823958 | 1.05E-53 | -1.69E-46 |
| MS.gene060400 | MS.gene84498 | 0.80601 | 1.01E-49 | -1.69E-46 |
| MS.gene060400 | MS.gene84840 | 0.825341 | 4.94E-54 | -1.69E-46 |
| MS.gene060400 | MS.gene86267 | 0.838259 | 3.20E-57 | -1.69E-46 |
| MS.gene060400 | MS.gene87622 | 0.8364 | 9.57E-57 | -1.69E-46 |
| MS.gene060400 | MS.gene88649 | 0.845425 | 4.09E-59 | -1.69E-46 |
| MS.gene060400 | MS.gene89581 | 0.823147 | 1.62E-53 | -1.69E-46 |
| MS.gene060400 | MS.gene89730 | 0.80425 | 2.36E-49 | -1.69E-46 |
| MS.gene060400 | MS.gene90763 | 0.800536 | 1.38E-48 | -1.69E-46 |
| MS.gene060400 | MS.gene92122 | 0.821224 | 4.52E-53 | -1.69E-46 |
| MS.gene060400 | MS.gene95040 | 0.803062 | 4.17E-49 | -1.69E-46 |
| MS.gene060400 | MS.gene95096 | 0.801724 | 7.87E-49 | -1.69E-46 |
| MS.gene060400 | MS.gene95339 | 0.809105 | 2.23E-50 | -1.69E-46 |
| MS.gene060400 | MS.gene95562 | 0.817884 | 2.62E-52 | -1.69E-46 |
| MS.gene060400 | MS.gene96231 | 0.80949 | 1.84E-50 | -1.69E-46 |
| MS.gene060400 | MS.gene96260 | 0.800332 | 1.51E-48 | -1.69E-46 |
| MS.gene060400 | MS.gene99525 | 0.809899 | 1.51E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene060400 | MS.gene032655 | PPI |
| MS.gene060400 | MS.gene072750 | PPI |
| MS.gene060400 | MS.gene21644 | PPI |
| MS.gene060400 | MS.gene82807 | PPI |
| MS.gene060400 | MS.gene028526 | PPI |
| MS.gene060400 | MS.gene024472 | PPI |
| MS.gene060400 | MS.gene40102 | PPI |
| MS.gene060400 | MS.gene025937 | PPI |
| MS.gene060400 | MS.gene024663 | PPI |
| MS.gene060400 | MS.gene053627 | PPI |
| MS.gene060400 | MS.gene90270 | PPI |
| MS.gene060400 | MS.gene053078 | PPI |
| MS.gene22823 | MS.gene060400 | PPI |
| MS.gene060400 | MS.gene050620 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060400.t1 | MTR_2g036810 | 99.060 | 319 | 2 | 1 | 1 | 319 | 1 | 318 | 0.0 | 652 |
| MS.gene060400.t1 | MTR_4g005740 | 76.254 | 299 | 71 | 0 | 18 | 316 | 13 | 311 | 0.0 | 503 |
| MS.gene060400.t1 | MTR_5g009670 | 67.347 | 294 | 94 | 1 | 11 | 304 | 13 | 304 | 1.75e-155 | 437 |
| MS.gene060400.t1 | MTR_4g092780 | 65.781 | 301 | 100 | 2 | 15 | 314 | 16 | 314 | 3.11e-151 | 427 |
| MS.gene060400.t1 | MTR_7g116910 | 65.116 | 301 | 102 | 2 | 15 | 314 | 16 | 314 | 4.41e-151 | 427 |
| MS.gene060400.t1 | MTR_6g004520 | 60.535 | 299 | 113 | 4 | 20 | 318 | 10 | 303 | 4.59e-129 | 370 |
| MS.gene060400.t1 | MTR_6g004520 | 60.535 | 299 | 113 | 4 | 20 | 318 | 68 | 361 | 6.55e-129 | 372 |
| MS.gene060400.t1 | MTR_6g004520 | 60.535 | 299 | 113 | 4 | 20 | 318 | 57 | 350 | 2.62e-128 | 370 |
| MS.gene060400.t1 | MTR_5g009670 | 65.966 | 238 | 79 | 1 | 11 | 248 | 13 | 248 | 2.35e-120 | 346 |
| MS.gene060400.t1 | MTR_5g020640 | 34.146 | 287 | 168 | 7 | 15 | 299 | 43 | 310 | 1.09e-41 | 147 |
| MS.gene060400.t1 | MTR_5g020640 | 38.674 | 181 | 101 | 4 | 15 | 195 | 43 | 213 | 5.03e-31 | 117 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060400.t1 | AT5G57330 | 78.205 | 312 | 68 | 0 | 6 | 317 | 1 | 312 | 0.0 | 529 |
| MS.gene060400.t1 | AT3G61610 | 65.667 | 300 | 100 | 2 | 15 | 313 | 16 | 313 | 4.57e-151 | 427 |
| MS.gene060400.t1 | AT3G61610 | 65.667 | 300 | 100 | 2 | 15 | 313 | 10 | 307 | 5.25e-151 | 426 |
| MS.gene060400.t1 | AT3G01590 | 63.880 | 299 | 104 | 3 | 20 | 318 | 10 | 304 | 3.08e-143 | 406 |
| MS.gene060400.t1 | AT3G01590 | 63.880 | 299 | 104 | 3 | 20 | 318 | 10 | 304 | 3.08e-143 | 406 |
| MS.gene060400.t1 | AT5G14500 | 63.211 | 299 | 106 | 3 | 20 | 318 | 10 | 304 | 7.60e-142 | 403 |
| MS.gene060400.t1 | AT4G23730 | 63.356 | 292 | 103 | 3 | 15 | 304 | 17 | 306 | 2.93e-140 | 399 |
| MS.gene060400.t1 | AT4G23730 | 62.416 | 298 | 102 | 4 | 15 | 304 | 17 | 312 | 3.03e-138 | 394 |
| MS.gene060400.t1 | AT5G14500 | 58.333 | 324 | 106 | 4 | 20 | 318 | 10 | 329 | 8.40e-136 | 389 |
| MS.gene060400.t1 | AT4G23730 | 64.207 | 271 | 93 | 3 | 36 | 304 | 3 | 271 | 8.28e-133 | 379 |
| MS.gene060400.t1 | AT4G25900 | 59.170 | 289 | 111 | 3 | 16 | 304 | 34 | 315 | 7.23e-128 | 368 |
| MS.gene060400.t1 | AT5G66530 | 34.122 | 296 | 174 | 8 | 6 | 299 | 1 | 277 | 1.11e-46 | 159 |
| MS.gene060400.t1 | AT5G66530 | 34.122 | 296 | 174 | 8 | 6 | 299 | 29 | 305 | 2.99e-46 | 159 |
| MS.gene060400.t1 | AT5G66530 | 34.122 | 296 | 174 | 8 | 6 | 299 | 29 | 305 | 2.99e-46 | 159 |
| MS.gene060400.t1 | AT5G66530 | 34.122 | 296 | 174 | 8 | 6 | 299 | 29 | 305 | 2.99e-46 | 159 |
Find 84 sgRNAs with CRISPR-Local
Find 327 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAAGTCTATGGCTGATTTC+GGG | 0.245986 | 2.1:+53541985 | MS.gene060400:CDS |
| TAAGCAAATGTGAACGAAAA+TGG | 0.285438 | 2.1:-53539557 | None:intergenic |
| GCAAAGTCTATGGCTGATTT+CGG | 0.300409 | 2.1:+53541984 | MS.gene060400:CDS |
| TGATCCCCAGAGAGTTCTTC+AGG | 0.316466 | 2.1:+53542142 | MS.gene060400:CDS |
| CACATGGATTTGCTAGAAAT+CGG | 0.325106 | 2.1:+53539189 | MS.gene060400:CDS |
| TCAATGATTGCAATCTTTGT+AGG | 0.348711 | 2.1:-53541374 | None:intergenic |
| CATACTTGTGGAAAGCATAT+TGG | 0.354504 | 2.1:-53538104 | None:intergenic |
| TACCAGTGGTGTGGAATCCT+TGG | 0.355984 | 2.1:+53541952 | MS.gene060400:intron |
| CTCAAATTATTTGTTGGAAA+AGG | 0.368191 | 2.1:-53539239 | None:intergenic |
| CTTCCTTTCCATTCTTCTCC+AGG | 0.370137 | 2.1:-53542074 | None:intergenic |
| ATCGAGACCATTGATACCTT+TGG | 0.378504 | 2.1:-53536787 | None:intergenic |
| CAAGGAGCGCTTTACTGAAC+AGG | 0.381888 | 2.1:+53540596 | MS.gene060400:CDS |
| GATTTGCTAGAAATCGGGTT+TGG | 0.388396 | 2.1:+53539195 | MS.gene060400:CDS |
| GCATGTGTTCAGTGAAGTTC+GGG | 0.389823 | 2.1:+53540530 | MS.gene060400:intron |
| TGCATGTGTTCAGTGAAGTT+CGG | 0.389851 | 2.1:+53540529 | MS.gene060400:intron |
| ATTTGCTAGAAATCGGGTTT+GGG | 0.400244 | 2.1:+53539196 | MS.gene060400:CDS |
| TGATGTTGACATCTCGGATT+CGG | 0.401283 | 2.1:+53539513 | MS.gene060400:CDS |
| GTACCGTCTGAGGGTAGCTT+TGG | 0.409016 | 2.1:+53539475 | MS.gene060400:CDS |
| CTGAAGAAGACATGAAGATC+TGG | 0.413789 | 2.1:+53539294 | MS.gene060400:CDS |
| AGCTGCCCTGAAGAACTCTC+TGG | 0.420120 | 2.1:-53542148 | None:intergenic |
| GTTTGCAAACCATGGAAACT+TGG | 0.421066 | 2.1:+53539163 | MS.gene060400:intron |
| ACCAGTGGTGTGGAATCCTT+GGG | 0.429036 | 2.1:+53541953 | MS.gene060400:intron |
| GGATAAGAAAGCAAAGTCTA+TGG | 0.429417 | 2.1:+53541974 | MS.gene060400:CDS |
| GCTTTGCTCAAATTATTTGT+TGG | 0.430674 | 2.1:-53539245 | None:intergenic |
| ATCTTCATGTCTTCTTCAGA+GGG | 0.440145 | 2.1:-53539290 | None:intergenic |
| TACCGTCTGAGGGTAGCTTT+GGG | 0.445671 | 2.1:+53539476 | MS.gene060400:CDS |
| GATCTTCATGTCTTCTTCAG+AGG | 0.451439 | 2.1:-53539291 | None:intergenic |
| CATGTGATTCCAAGTTTCCA+TGG | 0.458751 | 2.1:-53539172 | None:intergenic |
| ACATGGATTTGCTAGAAATC+GGG | 0.458820 | 2.1:+53539190 | MS.gene060400:CDS |
| AGATAGTACTGACCAGCATC+AGG | 0.460058 | 2.1:-53541440 | None:intergenic |
| CTGAGGGTAGCTTTGGGACC+CGG | 0.476818 | 2.1:+53539482 | MS.gene060400:CDS |
| CTTTGAAACCTGGAGAAGAA+TGG | 0.477692 | 2.1:+53542066 | MS.gene060400:CDS |
| GAGATTTGATGTTGACATCT+CGG | 0.482398 | 2.1:+53539507 | MS.gene060400:CDS |
| GACTTTGCTTTCTTATCCCA+AGG | 0.482545 | 2.1:-53541969 | None:intergenic |
| GATACCTTTGGTTAACGTAA+AGG | 0.483563 | 2.1:-53536775 | None:intergenic |
| TGTCAACATCAAATCTCCTC+CGG | 0.489606 | 2.1:-53539501 | None:intergenic |
| ACGTTAACCAAAGGTATCAA+TGG | 0.500062 | 2.1:+53536780 | MS.gene060400:CDS |
| TTATTTGTTGGAAAAGGAGG+AGG | 0.506185 | 2.1:-53539233 | None:intergenic |
| TTCAGTGAAGTTCGGGTAGA+GGG | 0.507198 | 2.1:+53540537 | MS.gene060400:intron |
| TGCCCACTACAGTAACTAGA+TGG | 0.512664 | 2.1:-53542116 | None:intergenic |
| AGAGGCTGCTAATATTGAAA+AGG | 0.515286 | 2.1:+53542037 | MS.gene060400:CDS |
| AAAGATGGCCTTCCTGATGC+TGG | 0.515378 | 2.1:+53541428 | MS.gene060400:CDS |
| TTCCATCTAGTTACTGTAGT+GGG | 0.517507 | 2.1:+53542114 | MS.gene060400:CDS |
| AGGTATCAATGGTCTCGATA+AGG | 0.518328 | 2.1:+53536791 | MS.gene060400:CDS |
| AGGAGGAGGGTCATCTTCAA+TGG | 0.524499 | 2.1:-53539219 | None:intergenic |
| AAATTATTTGTTGGAAAAGG+AGG | 0.527511 | 2.1:-53539236 | None:intergenic |
| GCTGCCCTGAAGAACTCTCT+GGG | 0.528642 | 2.1:-53542147 | None:intergenic |
| GGCTATCTTTAAGCCTCCTA+AGG | 0.532351 | 2.1:+53538064 | MS.gene060400:intron |
| ATCCCTCCACGAATAGCCTT+AGG | 0.532408 | 2.1:-53538080 | None:intergenic |
| ACATGAAGATCTGGAATCAC+AGG | 0.534377 | 2.1:+53539303 | MS.gene060400:CDS |
| CATGGAAACTTGGAATCACA+TGG | 0.537927 | 2.1:+53539173 | MS.gene060400:CDS |
| GTTCAGTGAAGTTCGGGTAG+AGG | 0.538925 | 2.1:+53540536 | MS.gene060400:intron |
| GGTAGAGGGATTAGAGACCT+TGG | 0.541717 | 2.1:+53540551 | MS.gene060400:CDS |
| AAGCCTCCTAAGGCTATTCG+TGG | 0.556125 | 2.1:+53538074 | MS.gene060400:CDS |
| TATTTGCAGTTTGCAAACCA+TGG | 0.562559 | 2.1:+53539155 | MS.gene060400:intron |
| TAAGCATATGCTTTGTGTAG+AGG | 0.564500 | 2.1:+53542019 | MS.gene060400:CDS |
| GATCCCCAGAGAGTTCTTCA+GGG | 0.569162 | 2.1:+53542143 | MS.gene060400:CDS |
| AAGGCTATCACTTTGAAACC+TGG | 0.573783 | 2.1:+53542056 | MS.gene060400:CDS |
| TTCGGAACACAAACAGTGAT+GGG | 0.574408 | 2.1:+53539531 | MS.gene060400:CDS |
| ACGGTGGACATGTGACTTCG+TGG | 0.575222 | 2.1:+53537160 | MS.gene060400:CDS |
| CTCCTAAGGCTATTCGTGGA+GGG | 0.577936 | 2.1:+53538078 | MS.gene060400:CDS |
| ATTCGGAACACAAACAGTGA+TGG | 0.579399 | 2.1:+53539530 | MS.gene060400:CDS |
| TATTTGTTGGAAAAGGAGGA+GGG | 0.579815 | 2.1:-53539232 | None:intergenic |
| TCTTGACAACTTGCAGAACA+AGG | 0.580190 | 2.1:+53540578 | MS.gene060400:CDS |
| GTCAACATCAAATCTCCTCC+GGG | 0.583810 | 2.1:-53539500 | None:intergenic |
| CAAGTTGTCAAGATAATCCA+AGG | 0.585326 | 2.1:-53540568 | None:intergenic |
| TCTTCCTTTACGTTAACCAA+AGG | 0.595171 | 2.1:+53536771 | MS.gene060400:CDS |
| TTTAAGAATCAAATCAACAA+AGG | 0.599913 | 2.1:-53539267 | None:intergenic |
| CCTCCACGAATAGCCTTAGG+AGG | 0.604158 | 2.1:-53538077 | None:intergenic |
| ATCTCGTGGCGCTTCCGCTG+AGG | 0.604527 | 2.1:+53536827 | MS.gene060400:CDS |
| GTTCTTCTTCGTGAATCTCG+TGG | 0.608797 | 2.1:+53536813 | MS.gene060400:CDS |
| AAACCTGGAGAAGAATGGAA+AGG | 0.623143 | 2.1:+53542071 | MS.gene060400:CDS |
| TTGTAGATTTATCTGTACGG+TGG | 0.625261 | 2.1:+53537144 | MS.gene060400:intron |
| AAAGTCTATGGCTGATTTCG+GGG | 0.626184 | 2.1:+53541986 | MS.gene060400:CDS |
| GATTTGTAGATTTATCTGTA+CGG | 0.629615 | 2.1:+53537141 | MS.gene060400:intron |
| GTCCCAAAGCTACCCTCAGA+CGG | 0.631656 | 2.1:-53539478 | None:intergenic |
| CCTCCTAAGGCTATTCGTGG+AGG | 0.641484 | 2.1:+53538077 | MS.gene060400:CDS |
| AGTACTGACCAGCATCAGGA+AGG | 0.642555 | 2.1:-53541436 | None:intergenic |
| GTTCCATCTAGTTACTGTAG+TGG | 0.643465 | 2.1:+53542113 | MS.gene060400:CDS |
| AAGGAGCGCTTTACTGAACA+GGG | 0.674715 | 2.1:+53540597 | MS.gene060400:CDS |
| CTGCCCTGAAGAACTCTCTG+GGG | 0.675919 | 2.1:-53542146 | None:intergenic |
| GTGGAAGAATGATCATGCTG+AGG | 0.679697 | 2.1:+53537179 | MS.gene060400:CDS |
| AGGGTAGCTTTGGGACCCGG+AGG | 0.683403 | 2.1:+53539485 | MS.gene060400:CDS |
| CGGTTATGATTATACCTCAG+CGG | 0.708489 | 2.1:-53536841 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAAAAAAAATAATAAAA+AGG | - | chr2.1:53541934-53541953 | None:intergenic | 0.0% |
| !! | AAATAATTACAATTTCTAAA+TGG | + | chr2.1:53539065-53539084 | MS.gene060400:intron | 10.0% |
| !! | AATTGTCAAAAAAAATAAAA+AGG | - | chr2.1:53538142-53538161 | None:intergenic | 10.0% |
| !! | CAAATTAATATACTATTAAT+TGG | + | chr2.1:53539771-53539790 | MS.gene060400:intron | 10.0% |
| !! | TTAATTATATCAATTTCTAT+TGG | - | chr2.1:53539020-53539039 | None:intergenic | 10.0% |
| !!! | TAACTTTTTTTTTGAAAAAA+AGG | + | chr2.1:53540757-53540776 | MS.gene060400:intron | 10.0% |
| !! | AAAAAAGTTATTCAAATGAA+AGG | - | chr2.1:53540747-53540766 | None:intergenic | 15.0% |
| !! | TAAAATTAATGAAATGTTGT+TGG | - | chr2.1:53539746-53539765 | None:intergenic | 15.0% |
| !! | TAAATATAAAAGAACAGATA+AGG | + | chr2.1:53541504-53541523 | MS.gene060400:intron | 15.0% |
| !! | TATATCATAATACTAAATTG+CGG | - | chr2.1:53537544-53537563 | None:intergenic | 15.0% |
| !!! | ATAAACCTTTTATTACAATT+AGG | + | chr2.1:53541865-53541884 | MS.gene060400:intron | 15.0% |
| !!! | ATTATTTTTTTTTTTACCAG+TGG | + | chr2.1:53541938-53541957 | MS.gene060400:intron | 15.0% |
| !!! | ATTTTAGTATTTTTTAGTGT+TGG | + | chr2.1:53537267-53537286 | MS.gene060400:intron | 15.0% |
| !!! | TTACAATTTTTTTTAATACC+TGG | + | chr2.1:53539353-53539372 | MS.gene060400:intron | 15.0% |
| !! | AAAAGAACAAGAAATATATG+TGG | - | chr2.1:53540440-53540459 | None:intergenic | 20.0% |
| !! | ATTAGAGTTTAGAAAAATAC+AGG | - | chr2.1:53541210-53541229 | None:intergenic | 20.0% |
| !! | ATTCATTTGACTGAAATAAA+TGG | + | chr2.1:53540714-53540733 | MS.gene060400:intron | 20.0% |
| !! | CATTAATCGTTGTTAATTAA+CGG | + | chr2.1:53536999-53537018 | MS.gene060400:intron | 20.0% |
| !! | GATATTAATATTTGCTTCAA+TGG | + | chr2.1:53537878-53537897 | MS.gene060400:intron | 20.0% |
| !! | GGTATTATATCAATTTCTAT+TGG | - | chr2.1:53538999-53539018 | None:intergenic | 20.0% |
| !! | TACAACCTAATTGTAATAAA+AGG | - | chr2.1:53541873-53541892 | None:intergenic | 20.0% |
| !! | TCTATACTTATTCTGTAATA+GGG | + | chr2.1:53541041-53541060 | MS.gene060400:intron | 20.0% |
| !! | TTAACAACAATGTTAATTGA+GGG | + | chr2.1:53538525-53538544 | MS.gene060400:intron | 20.0% |
| !! | TTGAAGCAAATATTAATATC+AGG | - | chr2.1:53537878-53537897 | None:intergenic | 20.0% |
| !! | TTGATTAGATGATTGATATA+TGG | + | chr2.1:53538004-53538023 | MS.gene060400:intron | 20.0% |
| !! | TTTAAGAATCAAATCAACAA+AGG | - | chr2.1:53539270-53539289 | None:intergenic | 20.0% |
| !!! | AAAGAAAGTTTTCATTATCT+TGG | - | chr2.1:53538891-53538910 | None:intergenic | 20.0% |
| !!! | GAATCTAGAATAATTGAAAT+CGG | - | chr2.1:53536928-53536947 | None:intergenic | 20.0% |
| !!! | TAGCTTTACTTTCTAAAAAT+TGG | + | chr2.1:53540460-53540479 | MS.gene060400:intron | 20.0% |
| !!! | TGAAAAATTTTCTATCGAAA+AGG | + | chr2.1:53537319-53537338 | MS.gene060400:intron | 20.0% |
| !!! | TGCTTATCATACTTATTTTT+CGG | + | chr2.1:53539574-53539593 | MS.gene060400:CDS | 20.0% |
| !!! | TTTTTTTTTGTATAGCTCAA+GGG | + | chr2.1:53539936-53539955 | MS.gene060400:intron | 20.0% |
| !!! | TTTTTTTTTTGTATAGCTCA+AGG | + | chr2.1:53539935-53539954 | MS.gene060400:intron | 20.0% |
| ! | AAATAGTAAGTACATACTTG+TGG | - | chr2.1:53538119-53538138 | None:intergenic | 25.0% |
| ! | AACCTATCATTTCAAGAAAA+AGG | - | chr2.1:53541333-53541352 | None:intergenic | 25.0% |
| ! | ACAACAACAACAACAAAAAA+AGG | - | chr2.1:53537482-53537501 | None:intergenic | 25.0% |
| ! | ACAACTTTACAGGAAAATAT+TGG | - | chr2.1:53541602-53541621 | None:intergenic | 25.0% |
| ! | ACAATATATAGTTCCTGAAA+AGG | + | chr2.1:53540812-53540831 | MS.gene060400:intron | 25.0% |
| ! | ACCTATCATTTCAAGAAAAA+GGG | - | chr2.1:53541332-53541351 | None:intergenic | 25.0% |
| ! | AGTATATCTTACAACTTTAC+AGG | - | chr2.1:53541612-53541631 | None:intergenic | 25.0% |
| ! | ATTTGACTGTGAAATTTAGA+AGG | + | chr2.1:53537056-53537075 | MS.gene060400:intron | 25.0% |
| ! | CAGAGCTAACTAATTAAAAT+TGG | + | chr2.1:53537796-53537815 | MS.gene060400:intron | 25.0% |
| ! | CAGCTGAATTTATAATAGAA+AGG | + | chr2.1:53539817-53539836 | MS.gene060400:intron | 25.0% |
| ! | CTATACTTATTCTGTAATAG+GGG | + | chr2.1:53541042-53541061 | MS.gene060400:intron | 25.0% |
| ! | GAATCAAGATTTGAATTACA+TGG | - | chr2.1:53536883-53536902 | None:intergenic | 25.0% |
| ! | GATTTGTAGATTTATCTGTA+CGG | + | chr2.1:53537141-53537160 | MS.gene060400:intron | 25.0% |
| ! | GTTAACAACAATGTTAATTG+AGG | + | chr2.1:53538524-53538543 | MS.gene060400:intron | 25.0% |
| ! | TAAAAGCAAGAAACATATGT+AGG | - | chr2.1:53540412-53540431 | None:intergenic | 25.0% |
| ! | TAACCTGAAACTAAATAGAA+GGG | - | chr2.1:53540663-53540682 | None:intergenic | 25.0% |
| ! | TAAGCTAGGATTTATATTTG+TGG | - | chr2.1:53538245-53538264 | None:intergenic | 25.0% |
| ! | TATGTGCATACAAGTTATTA+TGG | + | chr2.1:53538662-53538681 | MS.gene060400:intron | 25.0% |
| ! | TCAATATTTCACATAACAAG+CGG | - | chr2.1:53540791-53540810 | None:intergenic | 25.0% |
| ! | TCATTGATCATGAAAAAAAG+AGG | + | chr2.1:53541390-53541409 | MS.gene060400:CDS | 25.0% |
| ! | TCTAAGTTATCAAATTTGAG+TGG | + | chr2.1:53541896-53541915 | MS.gene060400:intron | 25.0% |
| ! | TTAACCTGAAACTAAATAGA+AGG | - | chr2.1:53540664-53540683 | None:intergenic | 25.0% |
| ! | TTAATTTCATACTTGAGTGT+AGG | - | chr2.1:53541831-53541850 | None:intergenic | 25.0% |
| ! | TTTGGTATGAATTCATCAAT+AGG | - | chr2.1:53540874-53540893 | None:intergenic | 25.0% |
| !! | AAAAAATGAAAAGCCTTTTC+AGG | - | chr2.1:53540828-53540847 | None:intergenic | 25.0% |
| !! | AAAATTGGCTTCAAAATGAA+CGG | + | chr2.1:53537811-53537830 | MS.gene060400:intron | 25.0% |
| !! | AAATTATTTGTTGGAAAAGG+AGG | - | chr2.1:53539239-53539258 | None:intergenic | 25.0% |
| !! | AAATTTTTCACCAACAAACT+CGG | - | chr2.1:53537309-53537328 | None:intergenic | 25.0% |
| !! | CGATTAATTAGAGTATCTTT+AGG | + | chr2.1:53537646-53537665 | MS.gene060400:intron | 25.0% |
| !! | CTCAAATTATTTGTTGGAAA+AGG | - | chr2.1:53539242-53539261 | None:intergenic | 25.0% |
| !! | TACTTTCTAAAAATTGGTTG+TGG | + | chr2.1:53540466-53540485 | MS.gene060400:intron | 25.0% |
| !! | TCGATAATTTTCTATCGAAA+AGG | + | chr2.1:53537361-53537380 | MS.gene060400:intron | 25.0% |
| !!! | AAAGTCAGAGTTTAAGTTTT+AGG | - | chr2.1:53538208-53538227 | None:intergenic | 25.0% |
| !!! | AAATTTGTAGCTTGCTAATT+CGG | + | chr2.1:53540291-53540310 | MS.gene060400:intron | 25.0% |
| !!! | ATCGAATTTAATTTTCTCAC+AGG | - | chr2.1:53538275-53538294 | None:intergenic | 25.0% |
| !!! | CTGTATTCTTTTTTAGATCA+CGG | + | chr2.1:53537404-53537423 | MS.gene060400:intron | 25.0% |
| !!! | TTCACAGGTTTTTTTTTTTG+AGG | + | chr2.1:53541265-53541284 | MS.gene060400:intron | 25.0% |
| !!! | TTGTAATACAGTAGTCTTAT+GGG | + | chr2.1:53541760-53541779 | MS.gene060400:intron | 25.0% |
| !!! | TTTTGTTTGTTTTGTAACCA+TGG | + | chr2.1:53539706-53539725 | MS.gene060400:intron | 25.0% |
| AAAGATATTCAAGTGAGACT+TGG | - | chr2.1:53541704-53541723 | None:intergenic | 30.0% | |
| AATTATTCTAGATTCCGATC+TGG | + | chr2.1:53536933-53536952 | MS.gene060400:intron | 30.0% | |
| ACCAAGTAGTCAACATATTA+GGG | + | chr2.1:53538468-53538487 | MS.gene060400:intron | 30.0% | |
| ACTTTCCTTGTATTGTTACT+TGG | - | chr2.1:53541636-53541655 | None:intergenic | 30.0% | |
| AGCAACAATTCTAGATATCT+AGG | + | chr2.1:53538771-53538790 | MS.gene060400:intron | 30.0% | |
| AGTTTAATGTTGCGATTTAG+AGG | - | chr2.1:53538701-53538720 | None:intergenic | 30.0% | |
| ATATCTTTGAATGCCTTGAT+TGG | + | chr2.1:53541716-53541735 | MS.gene060400:intron | 30.0% | |
| ATCATTTCAAGAAAAAGGGA+AGG | - | chr2.1:53541328-53541347 | None:intergenic | 30.0% | |
| ATGGATCAAGAACAGAAAAA+CGG | - | chr2.1:53536864-53536883 | None:intergenic | 30.0% | |
| CAAAACATTTACCCTTAATC+CGG | - | chr2.1:53537912-53537931 | None:intergenic | 30.0% | |
| GAAGATATTAAAGTTACACC+AGG | - | chr2.1:53539374-53539393 | None:intergenic | 30.0% | |
| GACATGTTTCATTCAGATAT+AGG | - | chr2.1:53541139-53541158 | None:intergenic | 30.0% | |
| GATCCAACAAAATCAAATCA+AGG | - | chr2.1:53538362-53538381 | None:intergenic | 30.0% | |
| GATGAAATTACTGAAAACAG+AGG | + | chr2.1:53538841-53538860 | MS.gene060400:intron | 30.0% | |
| GCTTTGCTCAAATTATTTGT+TGG | - | chr2.1:53539248-53539267 | None:intergenic | 30.0% | |
| GTTTCATTCAGATATAGGTT+GGG | - | chr2.1:53541134-53541153 | None:intergenic | 30.0% | |
| TAAGCAAATGTGAACGAAAA+TGG | - | chr2.1:53539560-53539579 | None:intergenic | 30.0% | |
| TAATATGCCAGTTCTCAAAA+CGG | - | chr2.1:53538415-53538434 | None:intergenic | 30.0% | |
| TACATACAATGCTTCATTGT+CGG | - | chr2.1:53537729-53537748 | None:intergenic | 30.0% | |
| TACTACCAAGTAACAATACA+AGG | + | chr2.1:53541628-53541647 | MS.gene060400:intron | 30.0% | |
| TATCTTTGAATGCCTTGATT+GGG | + | chr2.1:53541717-53541736 | MS.gene060400:intron | 30.0% | |
| TCAATGATTGCAATCTTTGT+AGG | - | chr2.1:53541377-53541396 | None:intergenic | 30.0% | |
| TGAACTTACAAAAACAAGTG+TGG | + | chr2.1:53540178-53540197 | MS.gene060400:intron | 30.0% | |
| TGTTTCATTCAGATATAGGT+TGG | - | chr2.1:53541135-53541154 | None:intergenic | 30.0% | |
| TTACAGGAAAATATTGGACA+TGG | - | chr2.1:53541596-53541615 | None:intergenic | 30.0% | |
| TTGTTAACTACTCTAAGTAG+AGG | - | chr2.1:53538512-53538531 | None:intergenic | 30.0% | |
| TTTGAATCAGAAGTAAGTCT+GGG | + | chr2.1:53540633-53540652 | MS.gene060400:intron | 30.0% | |
| ! | AAATTGGCTTCAAAATGAAC+GGG | + | chr2.1:53537812-53537831 | MS.gene060400:intron | 30.0% |
| ! | GTTGTAATACAGTAGTCTTA+TGG | + | chr2.1:53541759-53541778 | MS.gene060400:intron | 30.0% |
| ! | TAGAATTGTTGCTTCTAGAT+TGG | - | chr2.1:53538764-53538783 | None:intergenic | 30.0% |
| ! | TCCCTTTTTCTTGAAATGAT+AGG | + | chr2.1:53541328-53541347 | MS.gene060400:intron | 30.0% |
| ! | TTACGAAACTGTGTTTGTTT+TGG | + | chr2.1:53537241-53537260 | MS.gene060400:intron | 30.0% |
| ! | TTTCCCTTCTATTTAGTTTC+AGG | + | chr2.1:53540657-53540676 | MS.gene060400:intron | 30.0% |
| ! | TTTTGAATCAGAAGTAAGTC+TGG | + | chr2.1:53540632-53540651 | MS.gene060400:intron | 30.0% |
| !! | ATGCCTTGATTTGATTTTGT+TGG | + | chr2.1:53538356-53538375 | MS.gene060400:intron | 30.0% |
| !! | ATTTTTCGGTATCAGACATA+AGG | + | chr2.1:53539588-53539607 | MS.gene060400:CDS | 30.0% |
| !! | CAATGAAGCATTGTATGTAT+CGG | + | chr2.1:53537730-53537749 | MS.gene060400:intron | 30.0% |
| !! | CATTTACTTTTCCTTCATGT+GGG | + | chr2.1:53540110-53540129 | MS.gene060400:intron | 30.0% |
| !! | TATTGGTTTCGTTGTTTCTT+GGG | - | chr2.1:53538982-53539001 | None:intergenic | 30.0% |
| !! | TCATTTACTTTTCCTTCATG+TGG | + | chr2.1:53540109-53540128 | MS.gene060400:intron | 30.0% |
| !! | TTTTTGAGGAAATGTTTCAC+AGG | + | chr2.1:53541279-53541298 | MS.gene060400:intron | 30.0% |
| !!! | ACATTTGTTTTGCGTAAAGA+TGG | + | chr2.1:53541413-53541432 | MS.gene060400:CDS | 30.0% |
| !!! | ATGTTTCACAGGTTTTTTGT+TGG | + | chr2.1:53541290-53541309 | MS.gene060400:intron | 30.0% |
| !!! | ATTGCTTTTTCTCAGTAGTA+AGG | + | chr2.1:53537203-53537222 | MS.gene060400:CDS | 30.0% |
| !!! | TTAAGAGATGCTGGTTTTAT+AGG | + | chr2.1:53540680-53540699 | MS.gene060400:intron | 30.0% |
| !!! | TTTGTTTTGTAACCATGGTT+AGG | + | chr2.1:53539711-53539730 | MS.gene060400:intron | 30.0% |
| !!! | TTTTTTTTTTACCAGTGGTG+TGG | + | chr2.1:53541943-53541962 | MS.gene060400:intron | 30.0% |
| AAACCTCACTTAGTCTGATA+AGG | + | chr2.1:53539982-53540001 | MS.gene060400:intron | 35.0% | |
| AAACCTTATCAGACTAAGTG+AGG | - | chr2.1:53539988-53540007 | None:intergenic | 35.0% | |
| AAGTGAGGTTTGACCAAATA+AGG | - | chr2.1:53539973-53539992 | None:intergenic | 35.0% | |
| AATTTAGTTGCCGAGTTTGT+TGG | + | chr2.1:53537296-53537315 | MS.gene060400:intron | 35.0% | |
| ACTTATTCTGTAATAGGGGT+AGG | + | chr2.1:53541046-53541065 | MS.gene060400:intron | 35.0% | |
| AGAGGCTGCTAATATTGAAA+AGG | + | chr2.1:53542037-53542056 | MS.gene060400:CDS | 35.0% | |
| AGCATAAGTCGTATTGAAGA+AGG | + | chr2.1:53538295-53538314 | MS.gene060400:intron | 35.0% | |
| ATATAAGCAAGAAAACGCAG+AGG | - | chr2.1:53540989-53541008 | None:intergenic | 35.0% | |
| ATCTTCATGTCTTCTTCAGA+GGG | - | chr2.1:53539293-53539312 | None:intergenic | 35.0% | |
| ATCTTTGAATGCCTTGATTG+GGG | + | chr2.1:53541718-53541737 | MS.gene060400:intron | 35.0% | |
| ATTGAGGGTCTATGTAAGAT+TGG | + | chr2.1:53538540-53538559 | MS.gene060400:intron | 35.0% | |
| CAAGTTGTCAAGATAATCCA+AGG | - | chr2.1:53540571-53540590 | None:intergenic | 35.0% | |
| CACATGCAAATAAACCAGTT+AGG | - | chr2.1:53540517-53540536 | None:intergenic | 35.0% | |
| CATAAGTCGTATTGAAGAAG+GGG | + | chr2.1:53538297-53538316 | MS.gene060400:intron | 35.0% | |
| CATCGCTGTTTAGTATTAAC+TGG | + | chr2.1:53539644-53539663 | MS.gene060400:intron | 35.0% | |
| CATCTAATCAACATGAAAGC+TGG | - | chr2.1:53537995-53538014 | None:intergenic | 35.0% | |
| CGAAATATACCTAACCAGAT+CGG | - | chr2.1:53536950-53536969 | None:intergenic | 35.0% | |
| CTAAAAACAGAGTTTCTGCA+AGG | - | chr2.1:53541665-53541684 | None:intergenic | 35.0% | |
| CTATGCTATGATTGGCAATT+TGG | + | chr2.1:53540057-53540076 | MS.gene060400:intron | 35.0% | |
| GACCAAGTAGTCAACATATT+AGG | + | chr2.1:53538467-53538486 | MS.gene060400:intron | 35.0% | |
| GAGATTTGATGTTGACATCT+CGG | + | chr2.1:53539507-53539526 | MS.gene060400:CDS | 35.0% | |
| GATACCTTTGGTTAACGTAA+AGG | - | chr2.1:53536778-53536797 | None:intergenic | 35.0% | |
| GCATAAGTCGTATTGAAGAA+GGG | + | chr2.1:53538296-53538315 | MS.gene060400:intron | 35.0% | |
| GGATAAGAAAGCAAAGTCTA+TGG | + | chr2.1:53541974-53541993 | MS.gene060400:CDS | 35.0% | |
| GGTCTACAACTACAACATAA+AGG | - | chr2.1:53537523-53537542 | None:intergenic | 35.0% | |
| GTACTGAACTATGCTATGAT+TGG | + | chr2.1:53540049-53540068 | MS.gene060400:intron | 35.0% | |
| GTGTAGCTAATATGTTTCAC+AGG | + | chr2.1:53541250-53541269 | MS.gene060400:intron | 35.0% | |
| GTTGTGTCAAATCTGAAAGT+TGG | + | chr2.1:53540152-53540171 | MS.gene060400:intron | 35.0% | |
| TAAGCATATGCTTTGTGTAG+AGG | + | chr2.1:53542019-53542038 | MS.gene060400:CDS | 35.0% | |
| TAGAAGGAGGAAGAAGAAAA+AGG | + | chr2.1:53537072-53537091 | MS.gene060400:intron | 35.0% | |
| TATCAAATTTGAGTGGCTGT+TGG | + | chr2.1:53541903-53541922 | MS.gene060400:intron | 35.0% | |
| TATTATCTTGTTCCTTGTGC+AGG | + | chr2.1:53538043-53538062 | MS.gene060400:intron | 35.0% | |
| TATTTGCAGTTTGCAAACCA+TGG | + | chr2.1:53539155-53539174 | MS.gene060400:intron | 35.0% | |
| TCACAGGAATGTAATAAGCT+AGG | - | chr2.1:53538259-53538278 | None:intergenic | 35.0% | |
| TCTTCCTTTACGTTAACCAA+AGG | + | chr2.1:53536771-53536790 | MS.gene060400:CDS | 35.0% | |
| TGACTGTGAAATTTAGAAGG+AGG | + | chr2.1:53537059-53537078 | MS.gene060400:intron | 35.0% | |
| TTAACTCCACTAACTGAGTT+GGG | - | chr2.1:53540374-53540393 | None:intergenic | 35.0% | |
| TTATCTTGGTTTCCTCTATG+CGG | - | chr2.1:53538877-53538896 | None:intergenic | 35.0% | |
| TTATTTCCCAACTCAGTTAG+TGG | + | chr2.1:53540365-53540384 | MS.gene060400:intron | 35.0% | |
| TTCCATCTAGTTACTGTAGT+GGG | + | chr2.1:53542114-53542133 | MS.gene060400:CDS | 35.0% | |
| TTGAGGGTCTATGTAAGATT+GGG | + | chr2.1:53538541-53538560 | MS.gene060400:intron | 35.0% | |
| TTGTAGATTTATCTGTACGG+TGG | + | chr2.1:53537144-53537163 | MS.gene060400:intron | 35.0% | |
| TTTAACTCCACTAACTGAGT+TGG | - | chr2.1:53540375-53540394 | None:intergenic | 35.0% | |
| ! | AAACTCAAAGCATTATTGCC+GGG | + | chr2.1:53539845-53539864 | MS.gene060400:intron | 35.0% |
| ! | ACCCTAATATGTTGACTACT+TGG | - | chr2.1:53538472-53538491 | None:intergenic | 35.0% |
| ! | ATTTGCTAGAAATCGGGTTT+GGG | + | chr2.1:53539196-53539215 | MS.gene060400:CDS | 35.0% |
| ! | CAAACTCAAAGCATTATTGC+CGG | + | chr2.1:53539844-53539863 | MS.gene060400:intron | 35.0% |
| ! | CATACTTGTGGAAAGCATAT+TGG | - | chr2.1:53538107-53538126 | None:intergenic | 35.0% |
| ! | GCAATAATGCTTTGAGTTTG+AGG | - | chr2.1:53539844-53539863 | None:intergenic | 35.0% |
| ! | GGTTTAGTTGTCGTATCTTT+TGG | + | chr2.1:53540003-53540022 | MS.gene060400:intron | 35.0% |
| ! | GTGTGGATTTTTGTACATGA+TGG | + | chr2.1:53540195-53540214 | MS.gene060400:intron | 35.0% |
| ! | TAGAGGCTAGTTATCTAACT+TGG | - | chr2.1:53538495-53538514 | None:intergenic | 35.0% |
| ! | TATTTGTTGGAAAAGGAGGA+GGG | - | chr2.1:53539235-53539254 | None:intergenic | 35.0% |
| ! | TGGTTGAAATCTAGTTCAAG+AGG | + | chr2.1:53540023-53540042 | MS.gene060400:intron | 35.0% |
| ! | TTATTTGTTGGAAAAGGAGG+AGG | - | chr2.1:53539236-53539255 | None:intergenic | 35.0% |
| !! | ACATGGATTTGCTAGAAATC+GGG | + | chr2.1:53539190-53539209 | MS.gene060400:CDS | 35.0% |
| !! | ACGTTAACCAAAGGTATCAA+TGG | + | chr2.1:53536780-53536799 | MS.gene060400:CDS | 35.0% |
| !! | CACATGGATTTGCTAGAAAT+CGG | + | chr2.1:53539189-53539208 | MS.gene060400:CDS | 35.0% |
| !! | CTATTGGTTTCGTTGTTTCT+TGG | - | chr2.1:53538983-53539002 | None:intergenic | 35.0% |
| !! | TAGATCACGGTTCTAAATTG+TGG | + | chr2.1:53537417-53537436 | MS.gene060400:intron | 35.0% |
| !!! | TATTGCCGGGGTTTTTTATT+TGG | + | chr2.1:53539858-53539877 | MS.gene060400:intron | 35.0% |
| AAACCTGGAGAAGAATGGAA+AGG | + | chr2.1:53542071-53542090 | MS.gene060400:CDS | 40.0% | |
| ACCCATGATATCAAAGTTCG+CGG | - | chr2.1:53537443-53537462 | None:intergenic | 40.0% | |
| AGACAGCAGTGAAATCTAGA+AGG | - | chr2.1:53538925-53538944 | None:intergenic | 40.0% | |
| AGGTATCAATGGTCTCGATA+AGG | + | chr2.1:53536791-53536810 | MS.gene060400:CDS | 40.0% | |
| ATCGAGACCATTGATACCTT+TGG | - | chr2.1:53536790-53536809 | None:intergenic | 40.0% | |
| ATCGTAAGATCCTACCAACA+GGG | + | chr2.1:53538603-53538622 | MS.gene060400:intron | 40.0% | |
| ATGGCAGTTAATCCGGATTA+AGG | + | chr2.1:53537897-53537916 | MS.gene060400:intron | 40.0% | |
| ATTCGGAACACAAACAGTGA+TGG | + | chr2.1:53539530-53539549 | MS.gene060400:CDS | 40.0% | |
| ATTTCCATCACCATGTCATC+TGG | - | chr2.1:53539127-53539146 | None:intergenic | 40.0% | |
| CATGGAAACTTGGAATCACA+TGG | + | chr2.1:53539173-53539192 | MS.gene060400:CDS | 40.0% | |
| CATGTGATTCCAAGTTTCCA+TGG | - | chr2.1:53539175-53539194 | None:intergenic | 40.0% | |
| CGGTTATGATTATACCTCAG+CGG | - | chr2.1:53536844-53536863 | None:intergenic | 40.0% | |
| CTAATCAACATGAAAGCTGG+AGG | - | chr2.1:53537992-53538011 | None:intergenic | 40.0% | |
| CTGAAGAAGACATGAAGATC+TGG | + | chr2.1:53539294-53539313 | MS.gene060400:CDS | 40.0% | |
| GACTTTGCTTTCTTATCCCA+AGG | - | chr2.1:53541972-53541991 | None:intergenic | 40.0% | |
| GAGGATGAAGACGACTATAT+TGG | - | chr2.1:53538804-53538823 | None:intergenic | 40.0% | |
| GATCTTCATGTCTTCTTCAG+AGG | - | chr2.1:53539294-53539313 | None:intergenic | 40.0% | |
| GGTTGAAAGATTGAAACTCG+AGG | + | chr2.1:53538568-53538587 | MS.gene060400:intron | 40.0% | |
| GTAGAACCGACACTTCTAAT+GGG | - | chr2.1:53537777-53537796 | None:intergenic | 40.0% | |
| GTTAGTGGAGTTAAAGACTG+TGG | + | chr2.1:53540380-53540399 | MS.gene060400:intron | 40.0% | |
| GTTCCATCTAGTTACTGTAG+TGG | + | chr2.1:53542113-53542132 | MS.gene060400:CDS | 40.0% | |
| GTTTGCAAACCATGGAAACT+TGG | + | chr2.1:53539163-53539182 | MS.gene060400:intron | 40.0% | |
| TATAGTCGTCTTCATCCTCT+TGG | + | chr2.1:53538805-53538824 | MS.gene060400:intron | 40.0% | |
| TCTTGACAACTTGCAGAACA+AGG | + | chr2.1:53540578-53540597 | MS.gene060400:CDS | 40.0% | |
| TGATGTTGACATCTCGGATT+CGG | + | chr2.1:53539513-53539532 | MS.gene060400:CDS | 40.0% | |
| TGCATGTGTTCAGTGAAGTT+CGG | + | chr2.1:53540529-53540548 | MS.gene060400:intron | 40.0% | |
| TGCCACCAAATAAAAAACCC+CGG | - | chr2.1:53539866-53539885 | None:intergenic | 40.0% | |
| TGCTTCAATGGCAGTTAATC+CGG | + | chr2.1:53537890-53537909 | MS.gene060400:intron | 40.0% | |
| TGGCAGTTAATCCGGATTAA+GGG | + | chr2.1:53537898-53537917 | MS.gene060400:intron | 40.0% | |
| TGTAGAACCGACACTTCTAA+TGG | - | chr2.1:53537778-53537797 | None:intergenic | 40.0% | |
| TGTCAACATCAAATCTCCTC+CGG | - | chr2.1:53539504-53539523 | None:intergenic | 40.0% | |
| TTCGGAACACAAACAGTGAT+GGG | + | chr2.1:53539531-53539550 | MS.gene060400:CDS | 40.0% | |
| TTCTAGATTCCGATCTGGTT+AGG | + | chr2.1:53536938-53536957 | MS.gene060400:intron | 40.0% | |
| ! | AAAGTCTATGGCTGATTTCG+GGG | + | chr2.1:53541986-53542005 | MS.gene060400:CDS | 40.0% |
| ! | AACTCAAAGCATTATTGCCG+GGG | + | chr2.1:53539846-53539865 | MS.gene060400:intron | 40.0% |
| ! | ACACATCCCATTAGAAGTGT+CGG | + | chr2.1:53537768-53537787 | MS.gene060400:intron | 40.0% |
| ! | ACATGAAGATCTGGAATCAC+AGG | + | chr2.1:53539303-53539322 | MS.gene060400:CDS | 40.0% |
| ! | CAAAGTCTATGGCTGATTTC+GGG | + | chr2.1:53541985-53542004 | MS.gene060400:CDS | 40.0% |
| ! | CTGTTTTCCTTAGAGATGAG+AGG | + | chr2.1:53538173-53538192 | MS.gene060400:intron | 40.0% |
| ! | GCAAAGTCTATGGCTGATTT+CGG | + | chr2.1:53541984-53542003 | MS.gene060400:CDS | 40.0% |
| ! | GTTTAGATAGAGTGCCTAAC+TGG | + | chr2.1:53540500-53540519 | MS.gene060400:intron | 40.0% |
| ! | TTCATACCAAAAGTGTGCAC+TGG | + | chr2.1:53540883-53540902 | MS.gene060400:intron | 40.0% |
| !! | AAGGCTATCACTTTGAAACC+TGG | + | chr2.1:53542056-53542075 | MS.gene060400:CDS | 40.0% |
| !! | AGTTTCAGGTTAAGAGATGC+TGG | + | chr2.1:53540671-53540690 | MS.gene060400:intron | 40.0% |
| !! | CTTTGAAACCTGGAGAAGAA+TGG | + | chr2.1:53542066-53542085 | MS.gene060400:CDS | 40.0% |
| !! | GATTTGCTAGAAATCGGGTT+TGG | + | chr2.1:53539195-53539214 | MS.gene060400:CDS | 40.0% |
| !! | GGCTTTAAGTGGTCCTTATT+TGG | + | chr2.1:53539957-53539976 | MS.gene060400:intron | 40.0% |
| !! | TATAGCTCAAGGGCTTTAAG+TGG | + | chr2.1:53539946-53539965 | MS.gene060400:intron | 40.0% |
| !!! | CACATACACTTTTTCCCTGT+TGG | - | chr2.1:53538620-53538639 | None:intergenic | 40.0% |
| !!! | GGGTTTTTTATTTGGTGGCA+CGG | + | chr2.1:53539866-53539885 | MS.gene060400:intron | 40.0% |
| !!! | GGTTTTTTATTTGGTGGCAC+GGG | + | chr2.1:53539867-53539886 | MS.gene060400:intron | 40.0% |
| !!! | TACACTTTTTCCCTGTTGGT+AGG | - | chr2.1:53538616-53538635 | None:intergenic | 40.0% |
| !!! | TAGTTTTGAGTACCGTCTGA+GGG | + | chr2.1:53539466-53539485 | MS.gene060400:intron | 40.0% |
| AAAGATAAAGCCGACAGTGG+GGG | - | chr2.1:53540966-53540985 | None:intergenic | 45.0% | |
| AAGTACAACTGCCCACATGA+AGG | - | chr2.1:53540124-53540143 | None:intergenic | 45.0% | |
| AAGTCGTATTGAAGAAGGGG+TGG | + | chr2.1:53538300-53538319 | MS.gene060400:intron | 45.0% | |
| ACCAATGCCCAGATATGAAG+TGG | - | chr2.1:53541107-53541126 | None:intergenic | 45.0% | |
| AGGAAAGATAAAGCCGACAG+TGG | - | chr2.1:53540969-53540988 | None:intergenic | 45.0% | |
| AGGGTCTATGTAAGATTGGG+AGG | + | chr2.1:53538544-53538563 | MS.gene060400:intron | 45.0% | |
| AGTCGTATTGAAGAAGGGGT+GGG | + | chr2.1:53538301-53538320 | MS.gene060400:intron | 45.0% | |
| AGTGAGCTGCTCTCTTTGTA+GGG | - | chr2.1:53538391-53538410 | None:intergenic | 45.0% | |
| ATGCCACCCACTTCATATCT+GGG | + | chr2.1:53541097-53541116 | MS.gene060400:intron | 45.0% | |
| CCAATGCCCAGATATGAAGT+GGG | - | chr2.1:53541106-53541125 | None:intergenic | 45.0% | |
| CCTTAGAGATGAGAGGTGAA+AGG | + | chr2.1:53538180-53538199 | MS.gene060400:intron | 45.0% | |
| CCTTTCACCTCTCATCTCTA+AGG | - | chr2.1:53538183-53538202 | None:intergenic | 45.0% | |
| CTTCCTTTCCATTCTTCTCC+AGG | - | chr2.1:53542077-53542096 | None:intergenic | 45.0% | |
| CTTCTAATGGGATGTGTGTC+CGG | - | chr2.1:53537765-53537784 | None:intergenic | 45.0% | |
| GAAACTCGAGGATTGTAGCA+CGG | + | chr2.1:53538580-53538599 | MS.gene060400:intron | 45.0% | |
| GAAAGATAAAGCCGACAGTG+GGG | - | chr2.1:53540967-53540986 | None:intergenic | 45.0% | |
| GATCGTAAGATCCTACCAAC+AGG | + | chr2.1:53538602-53538621 | MS.gene060400:intron | 45.0% | |
| GCATGTGTTCAGTGAAGTTC+GGG | + | chr2.1:53540530-53540549 | MS.gene060400:intron | 45.0% | |
| GCCGCGAACTTTGATATCAT+GGG | + | chr2.1:53537439-53537458 | MS.gene060400:intron | 45.0% | |
| GCTTAAAGATAGCCTGCACA+AGG | - | chr2.1:53538058-53538077 | None:intergenic | 45.0% | |
| GGAAAGATAAAGCCGACAGT+GGG | - | chr2.1:53540968-53540987 | None:intergenic | 45.0% | |
| GGCTATCTTTAAGCCTCCTA+AGG | + | chr2.1:53538064-53538083 | MS.gene060400:intron | 45.0% | |
| GGGTCTATGTAAGATTGGGA+GGG | + | chr2.1:53538545-53538564 | MS.gene060400:intron | 45.0% | |
| GGTATCAACCAGCGCATATT+GGG | - | chr2.1:53541077-53541096 | None:intergenic | 45.0% | |
| GGTCTATGTAAGATTGGGAG+GGG | + | chr2.1:53538546-53538565 | MS.gene060400:intron | 45.0% | |
| GTCAACATCAAATCTCCTCC+GGG | - | chr2.1:53539503-53539522 | None:intergenic | 45.0% | |
| GTCTATGTAAGATTGGGAGG+GGG | + | chr2.1:53538547-53538566 | MS.gene060400:intron | 45.0% | |
| GTGGAAGAATGATCATGCTG+AGG | + | chr2.1:53537179-53537198 | MS.gene060400:CDS | 45.0% | |
| GTTCTTCTTCGTGAATCTCG+TGG | + | chr2.1:53536813-53536832 | MS.gene060400:CDS | 45.0% | |
| TCATCACACTCCAGATGACA+TGG | + | chr2.1:53539114-53539133 | MS.gene060400:intron | 45.0% | |
| TCCTCTGTTTCACTTCCAAG+AGG | - | chr2.1:53538823-53538842 | None:intergenic | 45.0% | |
| TCCTCTTGGAAGTGAAACAG+AGG | + | chr2.1:53538819-53538838 | MS.gene060400:intron | 45.0% | |
| TGCCCACTACAGTAACTAGA+TGG | - | chr2.1:53542119-53542138 | None:intergenic | 45.0% | |
| TGGTATCAACCAGCGCATAT+TGG | - | chr2.1:53541078-53541097 | None:intergenic | 45.0% | |
| TGGTGAAAGTAGCCTAACCA+TGG | - | chr2.1:53539726-53539745 | None:intergenic | 45.0% | |
| TTCAGTGAAGTTCGGGTAGA+GGG | + | chr2.1:53540537-53540556 | MS.gene060400:intron | 45.0% | |
| ! | TAGCAACCAGTGCACACTTT+TGG | - | chr2.1:53540892-53540911 | None:intergenic | 45.0% |
| !! | AAGGAGCGCTTTACTGAACA+GGG | + | chr2.1:53540597-53540616 | MS.gene060400:CDS | 45.0% |
| !! | AGATAGTACTGACCAGCATC+AGG | - | chr2.1:53541443-53541462 | None:intergenic | 45.0% |
| !! | TATGTATCGGTGTCAAACGC+CGG | + | chr2.1:53537743-53537762 | MS.gene060400:intron | 45.0% |
| !!! | GTAGTTTTGAGTACCGTCTG+AGG | + | chr2.1:53539465-53539484 | MS.gene060400:intron | 45.0% |
| !!! | TGCCGGGGTTTTTTATTTGG+TGG | + | chr2.1:53539861-53539880 | MS.gene060400:intron | 45.0% |
| AAAGATGGCCTTCCTGATGC+TGG | + | chr2.1:53541428-53541447 | MS.gene060400:CDS | 50.0% | |
| AAGCCTCCTAAGGCTATTCG+TGG | + | chr2.1:53538074-53538093 | MS.gene060400:CDS | 50.0% | |
| ACCAGTGGTGTGGAATCCTT+GGG | + | chr2.1:53541953-53541972 | MS.gene060400:intron | 50.0% | |
| AGGAGGAGGGTCATCTTCAA+TGG | - | chr2.1:53539222-53539241 | None:intergenic | 50.0% | |
| ATCCCTCCACGAATAGCCTT+AGG | - | chr2.1:53538083-53538102 | None:intergenic | 50.0% | |
| ATCCTATACTCCCCCACTGT+CGG | + | chr2.1:53540953-53540972 | MS.gene060400:intron | 50.0% | |
| ATGCCCAGATATGAAGTGGG+TGG | - | chr2.1:53541103-53541122 | None:intergenic | 50.0% | |
| CACTCCAGATGACATGGTGA+TGG | + | chr2.1:53539120-53539139 | MS.gene060400:intron | 50.0% | |
| CACTCGAACATCCCCAATCA+AGG | - | chr2.1:53541732-53541751 | None:intergenic | 50.0% | |
| CAGATATGAAGTGGGTGGCA+TGG | - | chr2.1:53541098-53541117 | None:intergenic | 50.0% | |
| CAGTGAGCTGCTCTCTTTGT+AGG | - | chr2.1:53538392-53538411 | None:intergenic | 50.0% | |
| CATGCCACCCACTTCATATC+TGG | + | chr2.1:53541096-53541115 | MS.gene060400:intron | 50.0% | |
| CCCACTTCATATCTGGGCAT+TGG | + | chr2.1:53541103-53541122 | MS.gene060400:intron | 50.0% | |
| CTCCTAAGGCTATTCGTGGA+GGG | + | chr2.1:53538078-53538097 | MS.gene060400:CDS | 50.0% | |
| GATCCCCAGAGAGTTCTTCA+GGG | + | chr2.1:53542143-53542162 | MS.gene060400:CDS | 50.0% | |
| GGCCGCGAACTTTGATATCA+TGG | + | chr2.1:53537438-53537457 | MS.gene060400:intron | 50.0% | |
| GGTAGAGGGATTAGAGACCT+TGG | + | chr2.1:53540551-53540570 | MS.gene060400:CDS | 50.0% | |
| GTCGTATTGAAGAAGGGGTG+GGG | + | chr2.1:53538302-53538321 | MS.gene060400:intron | 50.0% | |
| GTTCAGTGAAGTTCGGGTAG+AGG | + | chr2.1:53540536-53540555 | MS.gene060400:intron | 50.0% | |
| TACCAGTGGTGTGGAATCCT+TGG | + | chr2.1:53541952-53541971 | MS.gene060400:intron | 50.0% | |
| TACCGTCTGAGGGTAGCTTT+GGG | + | chr2.1:53539476-53539495 | MS.gene060400:CDS | 50.0% | |
| TCGTATTGAAGAAGGGGTGG+GGG | + | chr2.1:53538303-53538322 | MS.gene060400:intron | 50.0% | |
| TGATCCCCAGAGAGTTCTTC+AGG | + | chr2.1:53542142-53542161 | MS.gene060400:CDS | 50.0% | |
| ! | GTACATGATGGTGCAGAGTG+TGG | + | chr2.1:53540207-53540226 | MS.gene060400:intron | 50.0% |
| !! | AGTACTGACCAGCATCAGGA+AGG | - | chr2.1:53541439-53541458 | None:intergenic | 50.0% |
| !! | CAAGGAGCGCTTTACTGAAC+AGG | + | chr2.1:53540596-53540615 | MS.gene060400:CDS | 50.0% |
| !!! | CTCACTGCCGTTTTGAGAAC+TGG | + | chr2.1:53538405-53538424 | MS.gene060400:intron | 50.0% |
| ACGGTGGACATGTGACTTCG+TGG | + | chr2.1:53537160-53537179 | MS.gene060400:CDS | 55.0% | |
| AGCTGCCCTGAAGAACTCTC+TGG | - | chr2.1:53542151-53542170 | None:intergenic | 55.0% | |
| ATTGAAGAAGGGGTGGGGGT+GGG | + | chr2.1:53538307-53538326 | MS.gene060400:intron | 55.0% | |
| CAACCAGCGCATATTGGGCA+AGG | - | chr2.1:53541072-53541091 | None:intergenic | 55.0% | |
| CCTCCTAAGGCTATTCGTGG+AGG | + | chr2.1:53538077-53538096 | MS.gene060400:CDS | 55.0% | |
| CTGCCCTGAAGAACTCTCTG+GGG | - | chr2.1:53542149-53542168 | None:intergenic | 55.0% | |
| GCTGCCCTGAAGAACTCTCT+GGG | - | chr2.1:53542150-53542169 | None:intergenic | 55.0% | |
| GGGGATGTTCGAGTGAGCTT+GGG | + | chr2.1:53541737-53541756 | MS.gene060400:intron | 55.0% | |
| GTACCGTCTGAGGGTAGCTT+TGG | + | chr2.1:53539475-53539494 | MS.gene060400:CDS | 55.0% | |
| GTCCCAAAGCTACCCTCAGA+CGG | - | chr2.1:53539481-53539500 | None:intergenic | 55.0% | |
| TATTGAAGAAGGGGTGGGGG+TGG | + | chr2.1:53538306-53538325 | MS.gene060400:intron | 55.0% | |
| TCCCAAGGATTCCACACCAC+TGG | - | chr2.1:53541957-53541976 | None:intergenic | 55.0% | |
| TGGGGATGTTCGAGTGAGCT+TGG | + | chr2.1:53541736-53541755 | MS.gene060400:intron | 55.0% | |
| TTGGTTTCCTCTATGCGGCG+CGG | - | chr2.1:53538872-53538891 | None:intergenic | 55.0% | |
| ! | CCTCCACGAATAGCCTTAGG+AGG | - | chr2.1:53538080-53538099 | None:intergenic | 55.0% |
| ! | GACAGTGGGGGAGTATAGGA+TGG | - | chr2.1:53540954-53540973 | None:intergenic | 55.0% |
| AGGCCTTGCCCAATATGCGC+TGG | + | chr2.1:53541066-53541085 | MS.gene060400:intron | 60.0% | |
| ! | AGCCGACAGTGGGGGAGTAT+AGG | - | chr2.1:53540958-53540977 | None:intergenic | 60.0% |
| !! | CTGAGGGTAGCTTTGGGACC+CGG | + | chr2.1:53539482-53539501 | MS.gene060400:CDS | 60.0% |
| ATCTCGTGGCGCTTCCGCTG+AGG | + | chr2.1:53536827-53536846 | MS.gene060400:CDS | 65.0% | |
| GTTTCCTCTATGCGGCGCGG+TGG | - | chr2.1:53538869-53538888 | None:intergenic | 65.0% | |
| ! | AAGGGGTGGGGGTGGGTTCA+GGG | + | chr2.1:53538314-53538333 | MS.gene060400:intron | 65.0% |
| !! | AGGGTAGCTTTGGGACCCGG+AGG | + | chr2.1:53539485-53539504 | MS.gene060400:CDS | 65.0% |
| GGAACCACCGCGCCGCATAG+AGG | + | chr2.1:53538862-53538881 | MS.gene060400:intron | 70.0% | |
| ! | GAAGGGGTGGGGGTGGGTTC+AGG | + | chr2.1:53538313-53538332 | MS.gene060400:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.1 | gene | 53536741 | 53542172 | 53536741 | ID=MS.gene060400 |
| chr2.1 | mRNA | 53536741 | 53542172 | 53536741 | ID=MS.gene060400.t1;Parent=MS.gene060400 |
| chr2.1 | exon | 53536741 | 53536848 | 53536741 | ID=MS.gene060400.t1.exon1;Parent=MS.gene060400.t1 |
| chr2.1 | CDS | 53536741 | 53536848 | 53536741 | ID=cds.MS.gene060400.t1;Parent=MS.gene060400.t1 |
| chr2.1 | exon | 53537150 | 53537224 | 53537150 | ID=MS.gene060400.t1.exon2;Parent=MS.gene060400.t1 |
| chr2.1 | CDS | 53537150 | 53537224 | 53537150 | ID=cds.MS.gene060400.t1;Parent=MS.gene060400.t1 |
| chr2.1 | exon | 53538065 | 53538121 | 53538065 | ID=MS.gene060400.t1.exon3;Parent=MS.gene060400.t1 |
| chr2.1 | CDS | 53538065 | 53538121 | 53538065 | ID=cds.MS.gene060400.t1;Parent=MS.gene060400.t1 |
| chr2.1 | exon | 53539164 | 53539324 | 53539164 | ID=MS.gene060400.t1.exon4;Parent=MS.gene060400.t1 |
| chr2.1 | CDS | 53539164 | 53539324 | 53539164 | ID=cds.MS.gene060400.t1;Parent=MS.gene060400.t1 |
| chr2.1 | exon | 53539469 | 53539609 | 53539469 | ID=MS.gene060400.t1.exon5;Parent=MS.gene060400.t1 |
| chr2.1 | CDS | 53539469 | 53539609 | 53539469 | ID=cds.MS.gene060400.t1;Parent=MS.gene060400.t1 |
| chr2.1 | exon | 53540542 | 53540644 | 53540542 | ID=MS.gene060400.t1.exon6;Parent=MS.gene060400.t1 |
| chr2.1 | CDS | 53540542 | 53540644 | 53540542 | ID=cds.MS.gene060400.t1;Parent=MS.gene060400.t1 |
| chr2.1 | exon | 53541350 | 53541449 | 53541350 | ID=MS.gene060400.t1.exon7;Parent=MS.gene060400.t1 |
| chr2.1 | CDS | 53541350 | 53541449 | 53541350 | ID=cds.MS.gene060400.t1;Parent=MS.gene060400.t1 |
| chr2.1 | exon | 53541958 | 53542172 | 53541958 | ID=MS.gene060400.t1.exon8;Parent=MS.gene060400.t1 |
| chr2.1 | CDS | 53541958 | 53542172 | 53541958 | ID=cds.MS.gene060400.t1;Parent=MS.gene060400.t1 |
| Gene Sequence |
| Protein sequence |
