Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050633.t1 | XP_003626551.2 | 98.4 | 579 | 9 | 0 | 1 | 579 | 1 | 579 | 0.00E+00 | 1161.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050633.t1 | A0A1J6KGJ9 | 73.9 | 578 | 146 | 2 | 1 | 578 | 4 | 576 | 8.1e-257 | 887.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050633.t1 | G7L419 | 98.4 | 579 | 9 | 0 | 1 | 579 | 1 | 579 | 0.0e+00 | 1161.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050633 | MS.gene050657 | 0.811531 | 6.68E-51 | -1.69E-46 |
| MS.gene050633 | MS.gene053147 | 0.812648 | 3.81E-51 | -1.69E-46 |
| MS.gene050633 | MS.gene054467 | 0.815437 | 9.25E-52 | -1.69E-46 |
| MS.gene050633 | MS.gene054468 | 0.824381 | 8.32E-54 | -1.69E-46 |
| MS.gene050633 | MS.gene054581 | 0.81771 | 2.86E-52 | -1.69E-46 |
| MS.gene050633 | MS.gene059664 | 0.802112 | 6.55E-49 | -1.69E-46 |
| MS.gene050633 | MS.gene06052 | 0.802074 | 6.67E-49 | -1.69E-46 |
| MS.gene050633 | MS.gene069326 | 0.800466 | 1.42E-48 | -1.69E-46 |
| MS.gene050633 | MS.gene069868 | -0.805561 | 1.26E-49 | -1.69E-46 |
| MS.gene050633 | MS.gene22707 | 0.810049 | 1.40E-50 | -1.69E-46 |
| MS.gene050633 | MS.gene22809 | 0.912613 | 1.59E-83 | -1.69E-46 |
| MS.gene050633 | MS.gene24229 | 0.811746 | 6.00E-51 | -1.69E-46 |
| MS.gene050633 | MS.gene27006 | 0.823718 | 1.19E-53 | -1.69E-46 |
| MS.gene050633 | MS.gene27269 | 0.817406 | 3.35E-52 | -1.69E-46 |
| MS.gene050633 | MS.gene30368 | 0.80723 | 5.59E-50 | -1.69E-46 |
| MS.gene050633 | MS.gene34667 | 0.804358 | 2.24E-49 | -1.69E-46 |
| MS.gene050633 | MS.gene52956 | 0.808181 | 3.51E-50 | -1.69E-46 |
| MS.gene050633 | MS.gene53771 | 0.813879 | 2.05E-51 | -1.69E-46 |
| MS.gene050633 | MS.gene55778 | 0.837399 | 5.32E-57 | -1.69E-46 |
| MS.gene050633 | MS.gene76533 | -0.802488 | 5.48E-49 | -1.69E-46 |
| MS.gene050633 | MS.gene84812 | 0.81597 | 7.04E-52 | -1.69E-46 |
| MS.gene050633 | MS.gene90727 | 0.816913 | 4.33E-52 | -1.69E-46 |
| MS.gene050633 | MS.gene92122 | 0.811963 | 5.38E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene050633 | MS.gene073214 | PPI |
| MS.gene050633 | MS.gene99230 | PPI |
| MS.gene050633 | MS.gene36841 | PPI |
| MS.gene050633 | MS.gene78774 | PPI |
| MS.gene050633 | MS.gene045936 | PPI |
| MS.gene050633 | MS.gene95748 | PPI |
| MS.gene050633 | MS.gene046033 | PPI |
| MS.gene050633 | MS.gene34650 | PPI |
| MS.gene050633 | MS.gene25516 | PPI |
| MS.gene050633 | MS.gene053964 | PPI |
| MS.gene050633 | MS.gene064168 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050633.t1 | MTR_7g117110 | 98.446 | 579 | 9 | 0 | 1 | 579 | 1 | 579 | 0.0 | 1186 |
| MS.gene050633.t1 | MTR_8g027920 | 74.439 | 579 | 144 | 1 | 1 | 579 | 1 | 575 | 0.0 | 924 |
| MS.gene050633.t1 | MTR_8g027955 | 73.402 | 579 | 150 | 1 | 1 | 579 | 8 | 582 | 0.0 | 905 |
| MS.gene050633.t1 | MTR_8g027965 | 73.575 | 579 | 149 | 1 | 1 | 579 | 1 | 575 | 0.0 | 904 |
| MS.gene050633.t1 | MTR_8g027970 | 69.775 | 579 | 171 | 1 | 1 | 579 | 1 | 575 | 0.0 | 884 |
| MS.gene050633.t1 | MTR_7g117110 | 98.259 | 402 | 7 | 0 | 1 | 402 | 1 | 402 | 0.0 | 827 |
| MS.gene050633.t1 | MTR_0102s0060 | 48.537 | 581 | 285 | 6 | 11 | 579 | 19 | 597 | 0.0 | 582 |
| MS.gene050633.t1 | MTR_8g037720 | 73.832 | 321 | 62 | 1 | 259 | 579 | 137 | 435 | 3.66e-169 | 488 |
| MS.gene050633.t1 | MTR_8g037720 | 67.133 | 143 | 47 | 0 | 10 | 152 | 1 | 143 | 3.45e-57 | 198 |
| MS.gene050633.t1 | MTR_1g047730 | 79.389 | 262 | 43 | 1 | 318 | 579 | 112 | 362 | 8.56e-148 | 430 |
| MS.gene050633.t1 | MTR_1g047730 | 52.903 | 155 | 28 | 3 | 10 | 163 | 1 | 111 | 2.53e-35 | 136 |
| MS.gene050633.t1 | MTR_5g016320 | 39.931 | 581 | 338 | 6 | 5 | 578 | 15 | 591 | 7.95e-146 | 434 |
| MS.gene050633.t1 | MTR_0035s0150 | 39.367 | 569 | 327 | 8 | 12 | 575 | 21 | 576 | 1.73e-136 | 409 |
| MS.gene050633.t1 | MTR_4g045903 | 36.742 | 577 | 349 | 7 | 9 | 576 | 28 | 597 | 8.47e-131 | 395 |
| MS.gene050633.t1 | MTR_8g467000 | 35.919 | 593 | 358 | 9 | 1 | 575 | 1 | 589 | 3.06e-128 | 389 |
| MS.gene050633.t1 | MTR_2g081860 | 36.254 | 582 | 348 | 8 | 12 | 575 | 15 | 591 | 7.61e-125 | 380 |
| MS.gene050633.t1 | MTR_1g088765 | 36.972 | 568 | 333 | 10 | 7 | 554 | 7 | 569 | 1.29e-118 | 364 |
| MS.gene050633.t1 | MTR_7g094190 | 34.669 | 574 | 339 | 15 | 11 | 561 | 5 | 565 | 5.42e-95 | 302 |
| MS.gene050633.t1 | MTR_1g088765 | 38.372 | 430 | 241 | 9 | 142 | 554 | 3 | 425 | 5.23e-90 | 285 |
| MS.gene050633.t1 | MTR_7g094190 | 34.801 | 477 | 278 | 14 | 105 | 561 | 2 | 465 | 1.13e-74 | 246 |
| MS.gene050633.t1 | MTR_7g094330 | 33.010 | 309 | 168 | 8 | 105 | 408 | 2 | 276 | 3.07e-38 | 142 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050633.t1 | AT2G46370 | 63.746 | 582 | 200 | 5 | 1 | 578 | 12 | 586 | 0.0 | 793 |
| MS.gene050633.t1 | AT2G46370 | 63.746 | 582 | 200 | 5 | 1 | 578 | 1 | 575 | 0.0 | 793 |
| MS.gene050633.t1 | AT2G46370 | 63.746 | 582 | 200 | 5 | 1 | 578 | 1 | 575 | 0.0 | 793 |
| MS.gene050633.t1 | AT2G46370 | 65.209 | 503 | 166 | 3 | 78 | 578 | 1 | 496 | 0.0 | 715 |
| MS.gene050633.t1 | AT4G03400 | 50.339 | 590 | 273 | 7 | 7 | 579 | 5 | 591 | 0.0 | 606 |
| MS.gene050633.t1 | AT4G03400 | 50.339 | 590 | 273 | 7 | 7 | 579 | 5 | 591 | 0.0 | 606 |
| MS.gene050633.t1 | AT4G37390 | 38.302 | 577 | 342 | 8 | 12 | 578 | 22 | 594 | 1.83e-137 | 412 |
| MS.gene050633.t1 | AT2G23170 | 38.087 | 575 | 339 | 7 | 12 | 578 | 21 | 586 | 1.48e-136 | 410 |
| MS.gene050633.t1 | AT2G14960 | 38.609 | 575 | 330 | 8 | 12 | 578 | 21 | 580 | 1.66e-134 | 404 |
| MS.gene050633.t1 | AT4G27260 | 38.169 | 579 | 335 | 8 | 12 | 575 | 26 | 596 | 2.53e-132 | 400 |
| MS.gene050633.t1 | AT1G23160 | 38.621 | 580 | 324 | 11 | 12 | 576 | 16 | 578 | 4.16e-132 | 398 |
| MS.gene050633.t1 | AT1G48660 | 37.282 | 574 | 336 | 9 | 14 | 575 | 7 | 568 | 1.34e-131 | 397 |
| MS.gene050633.t1 | AT1G48660 | 37.128 | 571 | 338 | 8 | 14 | 575 | 7 | 565 | 2.36e-131 | 396 |
| MS.gene050633.t1 | AT1G59500 | 38.342 | 579 | 333 | 10 | 12 | 578 | 22 | 588 | 4.23e-131 | 396 |
| MS.gene050633.t1 | AT5G54510 | 36.797 | 587 | 352 | 8 | 3 | 575 | 15 | 596 | 5.89e-129 | 391 |
| MS.gene050633.t1 | AT5G13320 | 37.050 | 583 | 339 | 10 | 8 | 575 | 5 | 574 | 2.01e-126 | 383 |
| MS.gene050633.t1 | AT5G13320 | 37.050 | 583 | 339 | 10 | 8 | 575 | 5 | 574 | 2.01e-126 | 383 |
| MS.gene050633.t1 | AT5G13320 | 37.050 | 583 | 339 | 10 | 8 | 575 | 20 | 589 | 3.32e-126 | 383 |
| MS.gene050633.t1 | AT5G13360 | 36.780 | 590 | 347 | 10 | 1 | 575 | 1 | 579 | 8.15e-122 | 372 |
| MS.gene050633.t1 | AT5G13360 | 36.780 | 590 | 347 | 10 | 1 | 575 | 1 | 579 | 8.15e-122 | 372 |
| MS.gene050633.t1 | AT5G13360 | 36.780 | 590 | 347 | 10 | 1 | 575 | 79 | 657 | 6.04e-121 | 372 |
| MS.gene050633.t1 | AT5G51470 | 36.907 | 569 | 337 | 8 | 11 | 569 | 9 | 565 | 2.64e-120 | 368 |
| MS.gene050633.t1 | AT5G13370 | 36.486 | 592 | 347 | 12 | 1 | 575 | 1 | 580 | 3.88e-120 | 368 |
| MS.gene050633.t1 | AT1G28130 | 36.410 | 585 | 341 | 11 | 17 | 575 | 17 | 596 | 8.74e-120 | 367 |
| MS.gene050633.t1 | AT5G13350 | 35.374 | 588 | 359 | 12 | 1 | 575 | 1 | 580 | 9.32e-118 | 361 |
| MS.gene050633.t1 | AT5G13350 | 35.374 | 588 | 359 | 12 | 1 | 575 | 1 | 580 | 9.32e-118 | 361 |
| MS.gene050633.t1 | AT5G13380 | 36.054 | 588 | 354 | 10 | 1 | 575 | 31 | 609 | 4.10e-117 | 361 |
| MS.gene050633.t1 | AT2G47750 | 37.113 | 582 | 348 | 11 | 5 | 575 | 3 | 577 | 1.16e-116 | 358 |
| MS.gene050633.t1 | AT1G48670 | 32.042 | 568 | 318 | 9 | 16 | 575 | 10 | 517 | 2.02e-97 | 306 |
| MS.gene050633.t1 | AT5G51470 | 36.383 | 481 | 286 | 6 | 98 | 569 | 6 | 475 | 2.57e-97 | 305 |
| MS.gene050633.t1 | AT1G28130 | 36.748 | 449 | 257 | 8 | 150 | 575 | 9 | 453 | 7.62e-91 | 288 |
| MS.gene050633.t1 | AT1G48670 | 36.165 | 412 | 245 | 5 | 172 | 575 | 5 | 406 | 5.30e-89 | 281 |
| MS.gene050633.t1 | AT1G48690 | 35.263 | 190 | 114 | 6 | 14 | 200 | 7 | 190 | 1.31e-21 | 93.2 |
Find 116 sgRNAs with CRISPR-Local
Find 247 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCAATGCAAAGTACATTTA+TGG | 0.084381 | 7.3:-1106899 | MS.gene050633:CDS |
| CTATTACCACTATGTCTTTA+AGG | 0.098138 | 7.3:-1108060 | MS.gene050633:intron |
| TCATTCCATGGTATATATTT+TGG | 0.122722 | 7.3:+1107914 | None:intergenic |
| ATTATTAGTAGAAGAGAAAT+TGG | 0.187935 | 7.3:-1104841 | MS.gene050633:CDS |
| GGAAACACTCAAAAGAATTT+TGG | 0.206331 | 7.3:-1108245 | MS.gene050633:CDS |
| GCTGAATATTTGCAGAATTT+TGG | 0.212038 | 7.3:-1108208 | MS.gene050633:CDS |
| AGGTTCTATGGAACCATATT+TGG | 0.217500 | 7.3:-1106867 | MS.gene050633:CDS |
| TGGATTATGTTAGCTAGTTC+TGG | 0.251144 | 7.3:+1106974 | None:intergenic |
| TATGCTGTGCTTCCTCAAAT+TGG | 0.269811 | 7.3:-1106731 | MS.gene050633:CDS |
| TACGTAGTTCCCTGGTTCTT+TGG | 0.271512 | 7.3:+1104785 | None:intergenic |
| TGGCATTATGACAGGTTCTA+TGG | 0.272655 | 7.3:-1106879 | MS.gene050633:CDS |
| TCAGAGCCTTTGAACAAGTT+TGG | 0.276112 | 7.3:-1107093 | MS.gene050633:CDS |
| TTTCAGGTTTATACAGGTAT+AGG | 0.281287 | 7.3:-1105007 | MS.gene050633:intron |
| CTTGATCATTACCTTGGATT+AGG | 0.281601 | 7.3:-1104597 | MS.gene050633:CDS |
| CCTTAGAACTTCGGGTTGTT+AGG | 0.281656 | 7.3:-1104641 | MS.gene050633:CDS |
| CTTAAAGACATAGTGGTAAT+AGG | 0.285904 | 7.3:+1108061 | None:intergenic |
| CAGGGAACTACGTAATCTTC+TGG | 0.286130 | 7.3:-1104776 | MS.gene050633:CDS |
| AGTCCAGATGAAGTGATATT+TGG | 0.291634 | 7.3:-1107223 | MS.gene050633:CDS |
| CCTAACAACCCGAAGTTCTA+AGG | 0.305448 | 7.3:+1104641 | None:intergenic |
| TCAAGAATTCTACAGATAAA+AGG | 0.326689 | 7.3:+1108115 | None:intergenic |
| CAGAGCCTTTGAACAAGTTT+GGG | 0.335203 | 7.3:-1107092 | MS.gene050633:CDS |
| ATGTTAGCTAGTTCTGGATT+TGG | 0.354156 | 7.3:+1106980 | None:intergenic |
| TTTATCTGTAGAATTCTTGA+TGG | 0.355516 | 7.3:-1108112 | MS.gene050633:CDS |
| ACTAAATTTCAGGTTTATAC+AGG | 0.363189 | 7.3:-1105013 | MS.gene050633:intron |
| TATTGGAGCCTTAGAACTTC+GGG | 0.374940 | 7.3:-1104649 | MS.gene050633:CDS |
| GGGGATGTGGTAAAAGTTAT+GGG | 0.377506 | 7.3:-1104981 | MS.gene050633:CDS |
| TCTCGTAAAGTCAACTCTAT+TGG | 0.387723 | 7.3:-1104666 | MS.gene050633:CDS |
| AAGGCTTTAAACTTCATATA+CGG | 0.393788 | 7.3:-1107358 | MS.gene050633:CDS |
| CTACGAATAAACTTTAGTTC+TGG | 0.395325 | 7.3:+1104942 | None:intergenic |
| AGCAAACAGTTCAAAACAAA+AGG | 0.397243 | 7.3:-1107334 | MS.gene050633:CDS |
| CCTTTGTGTACTGCTGACTA+TGG | 0.399568 | 7.3:-1106815 | MS.gene050633:CDS |
| CCATAAATGTACTTTGCATT+GGG | 0.403210 | 7.3:+1106899 | None:intergenic |
| GATGTATAGGATTAAGCAAC+TGG | 0.406579 | 7.3:-1106946 | MS.gene050633:CDS |
| ATAGATGACAATATAATGAT+TGG | 0.410685 | 7.3:+1107188 | None:intergenic |
| GCCATAAATGTACTTTGCAT+TGG | 0.412688 | 7.3:+1106898 | None:intergenic |
| TTCATTGCATGTTTGTAAGA+TGG | 0.414552 | 7.3:+1107268 | None:intergenic |
| ATAATCCACAAAAGATGTAT+AGG | 0.416203 | 7.3:-1106959 | MS.gene050633:CDS |
| ACAGCATAAGTTGCCAATTC+AGG | 0.421103 | 7.3:+1106746 | None:intergenic |
| TTTCCGCGAGGAAGTTCAAT+TGG | 0.426349 | 7.3:-1107152 | MS.gene050633:CDS |
| AAAATTCTTGATCATTACCT+TGG | 0.430567 | 7.3:-1104603 | MS.gene050633:CDS |
| AGGGGATGTGGTAAAAGTTA+TGG | 0.432684 | 7.3:-1104982 | MS.gene050633:CDS |
| CCGCCAAATATCACTTCATC+TGG | 0.432735 | 7.3:+1107220 | None:intergenic |
| TACATTTATGGCATTATGAC+AGG | 0.440289 | 7.3:-1106887 | MS.gene050633:CDS |
| AAACCACAATGCAGATATAT+CGG | 0.444589 | 7.3:-1107880 | MS.gene050633:CDS |
| TTAGTTCTGGAGTTGAGTTA+TGG | 0.454186 | 7.3:+1104955 | None:intergenic |
| ATTGTTATGACCACTCCAAC+AGG | 0.456262 | 7.3:-1106599 | MS.gene050633:intron |
| CTATTGGAGCCTTAGAACTT+CGG | 0.462174 | 7.3:-1104650 | MS.gene050633:CDS |
| CAGGTATAGGCTAGGGGATG+TGG | 0.467515 | 7.3:-1104994 | MS.gene050633:CDS |
| TGCAGTTCTGGCACTACGCA+AGG | 0.476283 | 7.3:-1107941 | MS.gene050633:intron |
| GAACTTCGGGTTGTTAGGAA+AGG | 0.487975 | 7.3:-1104636 | MS.gene050633:CDS |
| AACTCAAAGTAACCAATTTG+AGG | 0.491446 | 7.3:+1106719 | None:intergenic |
| ATCTTACAAACATGCAATGA+AGG | 0.492223 | 7.3:-1107266 | MS.gene050633:CDS |
| GCAAACAGTTCAAAACAAAA+GGG | 0.492256 | 7.3:-1107333 | MS.gene050633:CDS |
| GAGTGAATGCTGCAACTGTT+TGG | 0.498901 | 7.3:-1104721 | MS.gene050633:CDS |
| CCTTTGTGTTAATCCTCAGC+CGG | 0.501458 | 7.3:-1106660 | MS.gene050633:CDS |
| AATTACTAAAGATGCAGAAA+GGG | 0.503049 | 7.3:-1108275 | MS.gene050633:CDS |
| CAGAAGATTACGTAGTTCCC+TGG | 0.503210 | 7.3:+1104777 | None:intergenic |
| GTTTATACAGGTATAGGCTA+GGG | 0.505461 | 7.3:-1105001 | MS.gene050633:CDS |
| TCAGTGAGTCCCACCGGCTG+AGG | 0.514095 | 7.3:+1106647 | None:intergenic |
| TCAAACAATTCATCATTCCA+TGG | 0.514252 | 7.3:+1107902 | None:intergenic |
| CTCTTCCCAAACTTGTTCAA+AGG | 0.517970 | 7.3:+1107087 | None:intergenic |
| AGATGAAGACCTGTTCCTAT+AGG | 0.519223 | 7.3:+1107847 | None:intergenic |
| GACATAGCAGTTCGAATGGA+GGG | 0.520344 | 7.3:+1107016 | None:intergenic |
| AGGGAACTACGTAATCTTCT+GGG | 0.522975 | 7.3:-1104775 | MS.gene050633:CDS |
| CCTGTTCCTATAGGCAAAAG+AGG | 0.524965 | 7.3:+1107856 | None:intergenic |
| TAATCTTCTGGGAAATCAGT+GGG | 0.525589 | 7.3:-1104764 | MS.gene050633:CDS |
| GGTTTATACAGGTATAGGCT+AGG | 0.526104 | 7.3:-1105002 | MS.gene050633:CDS |
| TAATTACTAAAGATGCAGAA+AGG | 0.529649 | 7.3:-1108276 | MS.gene050633:CDS |
| TTGTGTTAATCCTCAGCCGG+TGG | 0.532157 | 7.3:-1106657 | MS.gene050633:CDS |
| CCAGATGAAGTGATATTTGG+CGG | 0.533852 | 7.3:-1107220 | MS.gene050633:CDS |
| GATGCTTCTCCCATTCTCAC+TGG | 0.537832 | 7.3:-1108088 | MS.gene050633:CDS |
| GCTGACTATGGAGCTTCTGA+AGG | 0.543026 | 7.3:-1106803 | MS.gene050633:CDS |
| GTAAAACTGAGGCACTATGC+AGG | 0.551972 | 7.3:-1106845 | MS.gene050633:CDS |
| GGACTCACTGAGGTTAAAGT+TGG | 0.561408 | 7.3:-1106635 | MS.gene050633:CDS |
| TTTAGACATAGCAGTTCGAA+TGG | 0.562118 | 7.3:+1107012 | None:intergenic |
| GAAAGATTTACAGTTAGCCG+TGG | 0.563252 | 7.3:-1104877 | MS.gene050633:CDS |
| AAGTCTTTGTGAGTAGCTAG+TGG | 0.565261 | 7.3:+1108142 | None:intergenic |
| CTTTGTAATGATATAAGAGA+AGG | 0.565767 | 7.3:-1107064 | MS.gene050633:CDS |
| ACTAGCTACTCACAAAGACT+TGG | 0.569122 | 7.3:-1108140 | MS.gene050633:CDS |
| GTTGATTTATCCAAAGAACC+AGG | 0.570837 | 7.3:-1104795 | MS.gene050633:CDS |
| TCATTCTCAAGCTGTGTGAG+AGG | 0.572827 | 7.3:+1106692 | None:intergenic |
| ACAACACCTTAAAGACATAG+TGG | 0.579090 | 7.3:+1108054 | None:intergenic |
| AGATGCAGAAAGGGTTCAGA+GGG | 0.579727 | 7.3:-1108266 | MS.gene050633:CDS |
| TGTGTAGGACCTACACATCT+TGG | 0.580216 | 7.3:+1104549 | None:intergenic |
| TAACAGCTGTTCCTAATCCA+AGG | 0.581897 | 7.3:+1104586 | None:intergenic |
| GGAAGCCAAAATATATACCA+TGG | 0.582732 | 7.3:-1107919 | MS.gene050633:CDS |
| TGTGTTAATCCTCAGCCGGT+GGG | 0.586045 | 7.3:-1106656 | MS.gene050633:CDS |
| TATAAAACACCAAGATGTGT+AGG | 0.586504 | 7.3:-1104558 | MS.gene050633:CDS |
| ACTATGGAGCTTCTGAAGGG+TGG | 0.586810 | 7.3:-1106799 | MS.gene050633:CDS |
| ATAGGATTAAGCAACTGGTA+TGG | 0.589066 | 7.3:-1106941 | MS.gene050633:CDS |
| CAGAACTAAAGTTTATTCGT+AGG | 0.592685 | 7.3:-1104941 | MS.gene050633:CDS |
| TTATATTGTCATCTATTATG+CGG | 0.600773 | 7.3:-1107181 | MS.gene050633:CDS |
| ACAGTTAGCCGTGGAAGCAG+CGG | 0.606164 | 7.3:-1104868 | MS.gene050633:CDS |
| TTAACCTCAGTGAGTCCCAC+CGG | 0.608632 | 7.3:+1106641 | None:intergenic |
| AGACATAGCAGTTCGAATGG+AGG | 0.608831 | 7.3:+1107015 | None:intergenic |
| AGCAGTTCGAATGGAGGGAA+CGG | 0.609463 | 7.3:+1107021 | None:intergenic |
| GCATAAGTTGCCAATTCAGG+TGG | 0.614033 | 7.3:+1106749 | None:intergenic |
| TGAGTACTTACCTGTTGGAG+TGG | 0.617705 | 7.3:+1106589 | None:intergenic |
| GCAGTTCTGGCACTACGCAA+GGG | 0.622048 | 7.3:-1107940 | MS.gene050633:intron |
| GTAATCTTCTGGGAAATCAG+TGG | 0.631300 | 7.3:-1104765 | MS.gene050633:CDS |
| AAGATGCAGAAAGGGTTCAG+AGG | 0.633150 | 7.3:-1108267 | MS.gene050633:CDS |
| CTGACTATGGAGCTTCTGAA+GGG | 0.645246 | 7.3:-1106802 | MS.gene050633:CDS |
| CCATAGTCAGCAGTACACAA+AGG | 0.646601 | 7.3:+1106815 | None:intergenic |
| GGTCCGATATATCTGCATTG+TGG | 0.647561 | 7.3:+1107877 | None:intergenic |
| TTTATACAGGTATAGGCTAG+GGG | 0.649562 | 7.3:-1105000 | MS.gene050633:CDS |
| CAAACAGTTCAAAACAAAAG+GGG | 0.653886 | 7.3:-1107332 | MS.gene050633:CDS |
| TTGATTTATCCAAAGAACCA+GGG | 0.653926 | 7.3:-1104794 | MS.gene050633:CDS |
| GAAAGTGAAAGAGTTTAACA+TGG | 0.667358 | 7.3:-1108323 | MS.gene050633:CDS |
| CCGGCTGAGGATTAACACAA+AGG | 0.670791 | 7.3:+1106660 | None:intergenic |
| AACCATATTTGGTAAAACTG+AGG | 0.675088 | 7.3:-1106856 | MS.gene050633:CDS |
| AAACAGTTCAAAACAAAAGG+GGG | 0.677242 | 7.3:-1107331 | MS.gene050633:CDS |
| GTTCTTTGGATAAATCAACA+TGG | 0.683092 | 7.3:+1104799 | None:intergenic |
| TGCAACACAATGTTGTGTGT+AGG | 0.700702 | 7.3:+1104534 | None:intergenic |
| TCAGCCGGTGGGACTCACTG+AGG | 0.714814 | 7.3:-1106645 | MS.gene050633:CDS |
| AATCTTCTGGGAAATCAGTG+GGG | 0.735072 | 7.3:-1104763 | MS.gene050633:CDS |
| ATACCAATTGAACTTCCTCG+CGG | 0.744188 | 7.3:+1107149 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAGAAGAAAAAAACAT+AGG | + | chr7.3:1105340-1105359 | None:intergenic | 15.0% |
| !! | AATAAAGTAATAGATATTCT+TGG | - | chr7.3:1107611-1107630 | MS.gene050633:intron | 15.0% |
| !! | TATTCTATAGATACTATTTA+TGG | + | chr7.3:1105314-1105333 | None:intergenic | 15.0% |
| !! | TGAATAAAGAACAATAAAAA+TGG | + | chr7.3:1105058-1105077 | None:intergenic | 15.0% |
| !! | TTAATGAATACTATTTGAAT+TGG | + | chr7.3:1107736-1107755 | None:intergenic | 15.0% |
| !!! | AATTTTTCTACTGTATATTT+CGG | - | chr7.3:1106870-1106889 | MS.gene050633:CDS | 15.0% |
| !!! | TGCTATATTTTAATCTTATT+AGG | + | chr7.3:1107344-1107363 | None:intergenic | 15.0% |
| !!! | TTTATTGATTGAAATTCATA+GGG | - | chr7.3:1106420-1106439 | MS.gene050633:intron | 15.0% |
| !!! | TTTTATTGATTGAAATTCAT+AGG | - | chr7.3:1106419-1106438 | MS.gene050633:intron | 15.0% |
| !! | AAAATGAAAAAAGTAACCTA+AGG | + | chr7.3:1106920-1106939 | None:intergenic | 20.0% |
| !! | AACAATAAAAATGGTATACA+AGG | + | chr7.3:1105049-1105068 | None:intergenic | 20.0% |
| !! | ATAGATGACAATATAATGAT+TGG | + | chr7.3:1105628-1105647 | None:intergenic | 20.0% |
| !! | ATTATTAGTAGAAGAGAAAT+TGG | - | chr7.3:1107972-1107991 | MS.gene050633:intron | 20.0% |
| !! | GAAAATATTTATAATGCTTC+TGG | - | chr7.3:1107195-1107214 | MS.gene050633:CDS | 20.0% |
| !! | GAATATAAATTAAATGCTCT+TGG | - | chr7.3:1106892-1106911 | MS.gene050633:CDS | 20.0% |
| !! | TGTTAAAATCGTAATTGAAA+GGG | + | chr7.3:1107171-1107190 | None:intergenic | 20.0% |
| !! | TGTTACATCATTTAACATTA+GGG | + | chr7.3:1107032-1107051 | None:intergenic | 20.0% |
| !! | TTATATTGTCATCTATTATG+CGG | - | chr7.3:1105632-1105651 | MS.gene050633:intron | 20.0% |
| !! | TTGTTAAAATCGTAATTGAA+AGG | + | chr7.3:1107172-1107191 | None:intergenic | 20.0% |
| !! | TTGTTACATCATTTAACATT+AGG | + | chr7.3:1107033-1107052 | None:intergenic | 20.0% |
| !! | TTTAAATCTGTAATGATGTA+TGG | - | chr7.3:1107141-1107160 | MS.gene050633:CDS | 20.0% |
| !!! | CTTTATTTCTGATATTTGTT+GGG | - | chr7.3:1105004-1105023 | MS.gene050633:CDS | 20.0% |
| !!! | TATTTAAACTGCTTTAAATC+TGG | + | chr7.3:1107105-1107124 | None:intergenic | 20.0% |
| !!! | TCTTTATTTCTGATATTTGT+TGG | - | chr7.3:1105003-1105022 | MS.gene050633:CDS | 20.0% |
| !!! | TTATTGATTGAAATTCATAG+GGG | - | chr7.3:1106421-1106440 | MS.gene050633:intron | 20.0% |
| ! | AAAATTCTTGATCATTACCT+TGG | - | chr7.3:1108210-1108229 | MS.gene050633:CDS | 25.0% |
| ! | AATTACTAAAGATGCAGAAA+GGG | - | chr7.3:1104538-1104557 | MS.gene050633:CDS | 25.0% |
| ! | AGAGAGTTTCCTATAAAAAA+TGG | - | chr7.3:1105431-1105450 | MS.gene050633:intron | 25.0% |
| ! | ATAATCCACAAAAGATGTAT+AGG | - | chr7.3:1105854-1105873 | MS.gene050633:intron | 25.0% |
| ! | ATGAATAAACTTGTCTAAGT+TGG | + | chr7.3:1107289-1107308 | None:intergenic | 25.0% |
| ! | CTTTGTAATGATATAAGAGA+AGG | - | chr7.3:1105749-1105768 | MS.gene050633:intron | 25.0% |
| ! | GAGAGTTTCCTATAAAAAAT+GGG | - | chr7.3:1105432-1105451 | MS.gene050633:intron | 25.0% |
| ! | GTTACATCATTTAACATTAG+GGG | + | chr7.3:1107031-1107050 | None:intergenic | 25.0% |
| ! | TAATTACTAAAGATGCAGAA+AGG | - | chr7.3:1104537-1104556 | MS.gene050633:CDS | 25.0% |
| ! | TATATTGTGCACATTCAATA+CGG | + | chr7.3:1107694-1107713 | None:intergenic | 25.0% |
| ! | TCAAGAATTCTACAGATAAA+AGG | + | chr7.3:1104701-1104720 | None:intergenic | 25.0% |
| ! | TGTTAAATGATGTAACAAAG+TGG | - | chr7.3:1107035-1107054 | MS.gene050633:CDS | 25.0% |
| ! | TTTATCTGTAGAATTCTTGA+TGG | - | chr7.3:1104701-1104720 | MS.gene050633:CDS | 25.0% |
| !! | ATGTATTTTATTATGCTTGG+TGG | - | chr7.3:1107246-1107265 | MS.gene050633:CDS | 25.0% |
| !! | CATCATTACAGATTTAAAAC+TGG | + | chr7.3:1107139-1107158 | None:intergenic | 25.0% |
| !! | CATTTCTCTTTCATTTTGAA+CGG | - | chr7.3:1106670-1106689 | MS.gene050633:CDS | 25.0% |
| !! | TCATTCCATGGTATATATTT+TGG | + | chr7.3:1104902-1104921 | None:intergenic | 25.0% |
| !! | TGGATGTATTTTATTATGCT+TGG | - | chr7.3:1107243-1107262 | MS.gene050633:CDS | 25.0% |
| !! | TTAATCCTATACATCTTTTG+TGG | + | chr7.3:1105862-1105881 | None:intergenic | 25.0% |
| !! | TTATTTAATCGAGCTTTTCT+TGG | - | chr7.3:1107411-1107430 | MS.gene050633:intron | 25.0% |
| !! | TTCAACATACTCTCTTTTAT+TGG | + | chr7.3:1106498-1106517 | None:intergenic | 25.0% |
| !! | TTTTCCGTTGTTTATACAAT+CGG | + | chr7.3:1105133-1105152 | None:intergenic | 25.0% |
| !!! | AAGGCTTTAAACTTCATATA+CGG | - | chr7.3:1105455-1105474 | MS.gene050633:intron | 25.0% |
| !!! | ACTAAATTTCAGGTTTATAC+AGG | - | chr7.3:1107800-1107819 | MS.gene050633:intron | 25.0% |
| AAACAGTTCAAAACAAAAGG+GGG | - | chr7.3:1105482-1105501 | MS.gene050633:intron | 30.0% | |
| AAACCACAATGCAGATATAT+CGG | - | chr7.3:1104933-1104952 | MS.gene050633:CDS | 30.0% | |
| AACCATATTTGGTAAAACTG+AGG | - | chr7.3:1105957-1105976 | MS.gene050633:intron | 30.0% | |
| AACCTGAAATTTAGTCACAA+AGG | + | chr7.3:1107795-1107814 | None:intergenic | 30.0% | |
| AACTCAAAGTAACCAATTTG+AGG | + | chr7.3:1106097-1106116 | None:intergenic | 30.0% | |
| ACCATAAAACATTTCACAAC+TGG | - | chr7.3:1106847-1106866 | MS.gene050633:CDS | 30.0% | |
| AGCAAACAGTTCAAAACAAA+AGG | - | chr7.3:1105479-1105498 | MS.gene050633:intron | 30.0% | |
| AGCGAAAATTTATGAGTTCA+AGG | + | chr7.3:1104835-1104854 | None:intergenic | 30.0% | |
| ATAAACAACGGAAAATGATG+CGG | - | chr7.3:1105138-1105157 | MS.gene050633:intron | 30.0% | |
| ATAATTGAGTACTTACCTGT+TGG | + | chr7.3:1106232-1106251 | None:intergenic | 30.0% | |
| ATCTTACAAACATGCAATGA+AGG | - | chr7.3:1105547-1105566 | MS.gene050633:intron | 30.0% | |
| ATGTGGGTCACATATATATT+TGG | + | chr7.3:1106452-1106471 | None:intergenic | 30.0% | |
| CAAACAGTTCAAAACAAAAG+GGG | - | chr7.3:1105481-1105500 | MS.gene050633:intron | 30.0% | |
| CAACTGTCAAATGTTATAGT+TGG | - | chr7.3:1105282-1105301 | MS.gene050633:intron | 30.0% | |
| CAGAACTAAAGTTTATTCGT+AGG | - | chr7.3:1107872-1107891 | MS.gene050633:CDS | 30.0% | |
| CCAAACAAAAGTAAACTAAC+CGG | + | chr7.3:1106258-1106277 | None:intergenic | 30.0% | |
| CCATAAATGTACTTTGCATT+GGG | + | chr7.3:1105917-1105936 | None:intergenic | 30.0% | |
| CTATTACCACTATGTCTTTA+AGG | - | chr7.3:1104753-1104772 | MS.gene050633:CDS | 30.0% | |
| CTTAAAGACATAGTGGTAAT+AGG | + | chr7.3:1104755-1104774 | None:intergenic | 30.0% | |
| GAAAGTGAAAGAGTTTAACA+TGG | - | chr7.3:1104490-1104509 | MS.gene050633:CDS | 30.0% | |
| GCAAACAGTTCAAAACAAAA+GGG | - | chr7.3:1105480-1105499 | MS.gene050633:intron | 30.0% | |
| GTAAGTACTCAATTATTGTC+CGG | - | chr7.3:1106236-1106255 | MS.gene050633:intron | 30.0% | |
| GTTCTTTGGATAAATCAACA+TGG | + | chr7.3:1108017-1108036 | None:intergenic | 30.0% | |
| GTTTCCTATAAAAAATGGGA+AGG | - | chr7.3:1105436-1105455 | MS.gene050633:intron | 30.0% | |
| TACATTTATGGCATTATGAC+AGG | - | chr7.3:1105926-1105945 | MS.gene050633:intron | 30.0% | |
| TATAAAACACCAAGATGTGT+AGG | - | chr7.3:1108255-1108274 | MS.gene050633:CDS | 30.0% | |
| TCAAACAATTCATCATTCCA+TGG | + | chr7.3:1104914-1104933 | None:intergenic | 30.0% | |
| TCAAGGACTAATTAGATGAA+GGG | + | chr7.3:1104818-1104837 | None:intergenic | 30.0% | |
| TGAAACTTGTGTTAAAGAGT+GGG | + | chr7.3:1106388-1106407 | None:intergenic | 30.0% | |
| TTAAATCTGATAGTAGTCCT+TGG | + | chr7.3:1106319-1106338 | None:intergenic | 30.0% | |
| TTCAAGGACTAATTAGATGA+AGG | + | chr7.3:1104819-1104838 | None:intergenic | 30.0% | |
| TTCATTGCATGTTTGTAAGA+TGG | + | chr7.3:1105548-1105567 | None:intergenic | 30.0% | |
| TTGAAACTTGTGTTAAAGAG+TGG | + | chr7.3:1106389-1106408 | None:intergenic | 30.0% | |
| TTGATTTATCCAAAGAACCA+GGG | - | chr7.3:1108019-1108038 | MS.gene050633:intron | 30.0% | |
| TTTAACATTAGGGGTCAAAA+AGG | + | chr7.3:1107022-1107041 | None:intergenic | 30.0% | |
| ! | CTACGAATAAACTTTAGTTC+TGG | + | chr7.3:1107874-1107893 | None:intergenic | 30.0% |
| ! | GCTGAATATTTGCAGAATTT+TGG | - | chr7.3:1104605-1104624 | MS.gene050633:CDS | 30.0% |
| ! | GGAAACACTCAAAAGAATTT+TGG | - | chr7.3:1104568-1104587 | MS.gene050633:CDS | 30.0% |
| ! | TATCAGATTTAACTTTCCCA+TGG | - | chr7.3:1106327-1106346 | MS.gene050633:intron | 30.0% |
| ! | TCCAGTTGTGAAATGTTTTA+TGG | + | chr7.3:1106851-1106870 | None:intergenic | 30.0% |
| !! | TATAAAAGTGCCATGAATCA+TGG | + | chr7.3:1107492-1107511 | None:intergenic | 30.0% |
| !! | TTTCAGGTTTATACAGGTAT+AGG | - | chr7.3:1107806-1107825 | MS.gene050633:intron | 30.0% |
| !!! | AAAGCCTTCCCATTTTTTAT+AGG | + | chr7.3:1105443-1105462 | None:intergenic | 30.0% |
| !!! | TGCTATGTCATTTTCAACTT+TGG | - | chr7.3:1107464-1107483 | MS.gene050633:intron | 30.0% |
| AAGTGGCAAAACAATGTTTG+TGG | + | chr7.3:1106792-1106811 | None:intergenic | 35.0% | |
| ACAACACCTTAAAGACATAG+TGG | + | chr7.3:1104762-1104781 | None:intergenic | 35.0% | |
| AGGTTCTATGGAACCATATT+TGG | - | chr7.3:1105946-1105965 | MS.gene050633:intron | 35.0% | |
| AGTCCAGATGAAGTGATATT+TGG | - | chr7.3:1105590-1105609 | MS.gene050633:intron | 35.0% | |
| ATAGATCACACCAAATCATG+TGG | + | chr7.3:1106469-1106488 | None:intergenic | 35.0% | |
| ATAGGATTAAGCAACTGGTA+TGG | - | chr7.3:1105872-1105891 | MS.gene050633:intron | 35.0% | |
| ATCGGCTACTAAACTATGAT+TGG | + | chr7.3:1105115-1105134 | None:intergenic | 35.0% | |
| ATCTACCTACTCATAGTAAG+TGG | + | chr7.3:1106809-1106828 | None:intergenic | 35.0% | |
| ATGAAACTATGATGTGTCCT+TGG | + | chr7.3:1107565-1107584 | None:intergenic | 35.0% | |
| ATGAATCAGTACTACTACCA+AGG | - | chr7.3:1106299-1106318 | MS.gene050633:intron | 35.0% | |
| CAAGGACTAATTAGATGAAG+GGG | + | chr7.3:1104817-1104836 | None:intergenic | 35.0% | |
| CACCTTTGTGACTAAATTTC+AGG | - | chr7.3:1107790-1107809 | MS.gene050633:intron | 35.0% | |
| CCCAATGCAAAGTACATTTA+TGG | - | chr7.3:1105914-1105933 | MS.gene050633:intron | 35.0% | |
| CTTGATCATTACCTTGGATT+AGG | - | chr7.3:1108216-1108235 | MS.gene050633:CDS | 35.0% | |
| GAGATGCTTGAAGTTTAAGT+AGG | - | chr7.3:1106982-1107001 | MS.gene050633:CDS | 35.0% | |
| GATGTATAGGATTAAGCAAC+TGG | - | chr7.3:1105867-1105886 | MS.gene050633:intron | 35.0% | |
| GATTTACACGTAAGAGAGTA+GGG | + | chr7.3:1106708-1106727 | None:intergenic | 35.0% | |
| GCAAAACAATGTTTGTGGTT+TGG | + | chr7.3:1106787-1106806 | None:intergenic | 35.0% | |
| GCCATAAATGTACTTTGCAT+TGG | + | chr7.3:1105918-1105937 | None:intergenic | 35.0% | |
| GGAAGCCAAAATATATACCA+TGG | - | chr7.3:1104894-1104913 | MS.gene050633:CDS | 35.0% | |
| GTAGATTGTTAGTGCAAGTT+TGG | - | chr7.3:1106823-1106842 | MS.gene050633:CDS | 35.0% | |
| GTAGCCGATTGTATAAACAA+CGG | - | chr7.3:1105126-1105145 | MS.gene050633:intron | 35.0% | |
| GTTTATACAGGTATAGGCTA+GGG | - | chr7.3:1107812-1107831 | MS.gene050633:intron | 35.0% | |
| TAGATCACACCAAATCATGT+GGG | + | chr7.3:1106468-1106487 | None:intergenic | 35.0% | |
| TATATGTGACCCACATGATT+TGG | - | chr7.3:1106456-1106475 | MS.gene050633:intron | 35.0% | |
| TCTCGTAAAGTCAACTCTAT+TGG | - | chr7.3:1108147-1108166 | MS.gene050633:CDS | 35.0% | |
| TGAAAATGACATAGCAGATG+AGG | + | chr7.3:1107460-1107479 | None:intergenic | 35.0% | |
| TGATTTACACGTAAGAGAGT+AGG | + | chr7.3:1106709-1106728 | None:intergenic | 35.0% | |
| TGGATTATGTTAGCTAGTTC+TGG | + | chr7.3:1105842-1105861 | None:intergenic | 35.0% | |
| TGTTGATATAACCTATGCCA+AGG | - | chr7.3:1107545-1107564 | MS.gene050633:intron | 35.0% | |
| TTTAGACATAGCAGTTCGAA+TGG | + | chr7.3:1105804-1105823 | None:intergenic | 35.0% | |
| TTTATACAGGTATAGGCTAG+GGG | - | chr7.3:1107813-1107832 | MS.gene050633:intron | 35.0% | |
| ! | AACTTTGGTTCCATGATTCA+TGG | - | chr7.3:1107479-1107498 | MS.gene050633:intron | 35.0% |
| ! | AATAGGTTTTCCAGTGAGAA+TGG | + | chr7.3:1104738-1104757 | None:intergenic | 35.0% |
| ! | AGATTTAACTTTCCCATGGT+GGG | - | chr7.3:1106331-1106350 | MS.gene050633:intron | 35.0% |
| ! | ATAGGTTTTCCAGTGAGAAT+GGG | + | chr7.3:1104737-1104756 | None:intergenic | 35.0% |
| ! | CCAATTCAGGTGGAATTTTT+GGG | + | chr7.3:1106057-1106076 | None:intergenic | 35.0% |
| ! | CCTTTTTGCTAATTGGAGTT+GGG | - | chr7.3:1105385-1105404 | MS.gene050633:intron | 35.0% |
| ! | GATTTTCAGCAAAGTCTCAT+TGG | - | chr7.3:1107649-1107668 | MS.gene050633:intron | 35.0% |
| ! | GCTTTTCTTGGAGTTGAAAT+TGG | - | chr7.3:1107423-1107442 | MS.gene050633:intron | 35.0% |
| ! | GTTGATTTATCCAAAGAACC+AGG | - | chr7.3:1108018-1108037 | MS.gene050633:intron | 35.0% |
| ! | TAATCTTCTGGGAAATCAGT+GGG | - | chr7.3:1108049-1108068 | MS.gene050633:intron | 35.0% |
| ! | TACCATGCCTTTTTGCTAAT+TGG | - | chr7.3:1105378-1105397 | MS.gene050633:intron | 35.0% |
| ! | TGCCTCAGTTTTACCAAATA+TGG | + | chr7.3:1105962-1105981 | None:intergenic | 35.0% |
| !! | ATGTTAGCTAGTTCTGGATT+TGG | + | chr7.3:1105836-1105855 | None:intergenic | 35.0% |
| !! | TTAGTTCTGGAGTTGAGTTA+TGG | + | chr7.3:1107861-1107880 | None:intergenic | 35.0% |
| !! | TTTTGCCACTTACTATGAGT+AGG | - | chr7.3:1106801-1106820 | MS.gene050633:CDS | 35.0% |
| !!! | CCGGTTAGTTTACTTTTGTT+TGG | - | chr7.3:1106255-1106274 | MS.gene050633:intron | 35.0% |
| !!! | TTGCAGAATTTTGGTCTTGA+TGG | - | chr7.3:1104614-1104633 | MS.gene050633:CDS | 35.0% |
| AACTTGTGTTAAAGAGTGGG+TGG | + | chr7.3:1106385-1106404 | None:intergenic | 40.0% | |
| AAGTCTTTGTGAGTAGCTAG+TGG | + | chr7.3:1104674-1104693 | None:intergenic | 40.0% | |
| ACAGCATAAGTTGCCAATTC+AGG | + | chr7.3:1106070-1106089 | None:intergenic | 40.0% | |
| ACTAGCTACTCACAAAGACT+TGG | - | chr7.3:1104673-1104692 | MS.gene050633:CDS | 40.0% | |
| AGATGAAGACCTGTTCCTAT+AGG | + | chr7.3:1104969-1104988 | None:intergenic | 40.0% | |
| AGGGAACTACGTAATCTTCT+GGG | - | chr7.3:1108038-1108057 | MS.gene050633:intron | 40.0% | |
| AGGGGATGTGGTAAAAGTTA+TGG | - | chr7.3:1107831-1107850 | MS.gene050633:intron | 40.0% | |
| ATACCAATTGAACTTCCTCG+CGG | + | chr7.3:1105667-1105686 | None:intergenic | 40.0% | |
| ATAGGAAACTCTCTGCAGAA+AGG | + | chr7.3:1105425-1105444 | None:intergenic | 40.0% | |
| ATTGTTATGACCACTCCAAC+AGG | - | chr7.3:1106214-1106233 | MS.gene050633:intron | 40.0% | |
| CAGAGCCTTTGAACAAGTTT+GGG | - | chr7.3:1105721-1105740 | MS.gene050633:intron | 40.0% | |
| CCAGATGAAGTGATATTTGG+CGG | - | chr7.3:1105593-1105612 | MS.gene050633:intron | 40.0% | |
| CCCAAAAATTCCACCTGAAT+TGG | - | chr7.3:1106054-1106073 | MS.gene050633:intron | 40.0% | |
| CCCAACTCCAATTAGCAAAA+AGG | + | chr7.3:1105388-1105407 | None:intergenic | 40.0% | |
| CTATTGGAGCCTTAGAACTT+CGG | - | chr7.3:1108163-1108182 | MS.gene050633:CDS | 40.0% | |
| CTCCAATTAGCAAAAAGGCA+TGG | + | chr7.3:1105383-1105402 | None:intergenic | 40.0% | |
| GAAAGATTTACAGTTAGCCG+TGG | - | chr7.3:1107936-1107955 | MS.gene050633:CDS | 40.0% | |
| GGGGATGTGGTAAAAGTTAT+GGG | - | chr7.3:1107832-1107851 | MS.gene050633:intron | 40.0% | |
| GGTTTATACAGGTATAGGCT+AGG | - | chr7.3:1107811-1107830 | MS.gene050633:intron | 40.0% | |
| GTGGCATTTAGTATGGGAAA+GGG | + | chr7.3:1106366-1106385 | None:intergenic | 40.0% | |
| TAACAGCTGTTCCTAATCCA+AGG | + | chr7.3:1108230-1108249 | None:intergenic | 40.0% | |
| TATGACACGTGCTTACTTTG+TGG | - | chr7.3:1107223-1107242 | MS.gene050633:CDS | 40.0% | |
| TATGCTGTGCTTCCTCAAAT+TGG | - | chr7.3:1106082-1106101 | MS.gene050633:intron | 40.0% | |
| TATTGGAGCCTTAGAACTTC+GGG | - | chr7.3:1108164-1108183 | MS.gene050633:CDS | 40.0% | |
| TCAGAGCCTTTGAACAAGTT+TGG | - | chr7.3:1105720-1105739 | MS.gene050633:intron | 40.0% | |
| TGCAACACAATGTTGTGTGT+AGG | + | chr7.3:1108282-1108301 | None:intergenic | 40.0% | |
| TGGCATTATGACAGGTTCTA+TGG | - | chr7.3:1105934-1105953 | MS.gene050633:intron | 40.0% | |
| TGTTCATCAGTCATGCTATG+TGG | + | chr7.3:1105228-1105247 | None:intergenic | 40.0% | |
| TTAAATGCTCTTGGCACCTT+AGG | - | chr7.3:1106901-1106920 | MS.gene050633:CDS | 40.0% | |
| TTTGCATTGGGAAAAAGCTC+TGG | + | chr7.3:1105905-1105924 | None:intergenic | 40.0% | |
| ! | AATCTTCTGGGAAATCAGTG+GGG | - | chr7.3:1108050-1108069 | MS.gene050633:intron | 40.0% |
| ! | CAGATTTAACTTTCCCATGG+TGG | - | chr7.3:1106330-1106349 | MS.gene050633:intron | 40.0% |
| ! | CTCTTCCCAAACTTGTTCAA+AGG | + | chr7.3:1105729-1105748 | None:intergenic | 40.0% |
| ! | GATTTAACTTTCCCATGGTG+GGG | - | chr7.3:1106332-1106351 | MS.gene050633:intron | 40.0% |
| ! | GCCAATTCAGGTGGAATTTT+TGG | + | chr7.3:1106058-1106077 | None:intergenic | 40.0% |
| ! | GCCTTTTTGCTAATTGGAGT+TGG | - | chr7.3:1105384-1105403 | MS.gene050633:intron | 40.0% |
| ! | GTAATCTTCTGGGAAATCAG+TGG | - | chr7.3:1108048-1108067 | MS.gene050633:intron | 40.0% |
| ! | TACGAATGTTACTTGCACTG+TGG | - | chr7.3:1106555-1106574 | MS.gene050633:intron | 40.0% |
| ! | TTGGTGGTTTGACCATCTTT+GGG | - | chr7.3:1107262-1107281 | MS.gene050633:CDS | 40.0% |
| !! | TCTCTTAACTGTGCTACTTC+AGG | + | chr7.3:1107062-1107081 | None:intergenic | 40.0% |
| AAGATGCAGAAAGGGTTCAG+AGG | - | chr7.3:1104546-1104565 | MS.gene050633:CDS | 45.0% | |
| AGACATAGCAGTTCGAATGG+AGG | + | chr7.3:1105801-1105820 | None:intergenic | 45.0% | |
| AGAGTGGGTGGCATTTAGTA+TGG | + | chr7.3:1106373-1106392 | None:intergenic | 45.0% | |
| AGATGCAGAAAGGGTTCAGA+GGG | - | chr7.3:1104547-1104566 | MS.gene050633:CDS | 45.0% | |
| CAGAAGATTACGTAGTTCCC+TGG | + | chr7.3:1108039-1108058 | None:intergenic | 45.0% | |
| CAGGGAACTACGTAATCTTC+TGG | - | chr7.3:1108037-1108056 | MS.gene050633:intron | 45.0% | |
| CCATAGTCAGCAGTACACAA+AGG | + | chr7.3:1106001-1106020 | None:intergenic | 45.0% | |
| CCGCCAAATATCACTTCATC+TGG | + | chr7.3:1105596-1105615 | None:intergenic | 45.0% | |
| CCTAACAACCCGAAGTTCTA+AGG | + | chr7.3:1108175-1108194 | None:intergenic | 45.0% | |
| CCTGTTCCTATAGGCAAAAG+AGG | + | chr7.3:1104960-1104979 | None:intergenic | 45.0% | |
| CCTTTGTGTTAATCCTCAGC+CGG | - | chr7.3:1106153-1106172 | MS.gene050633:intron | 45.0% | |
| CTATGATGTGTCCTTGGCAT+AGG | + | chr7.3:1107559-1107578 | None:intergenic | 45.0% | |
| CTGACTATGGAGCTTCTGAA+GGG | - | chr7.3:1106011-1106030 | MS.gene050633:intron | 45.0% | |
| GACATAGCAGTTCGAATGGA+GGG | + | chr7.3:1105800-1105819 | None:intergenic | 45.0% | |
| GAGTGAATGCTGCAACTGTT+TGG | - | chr7.3:1108092-1108111 | MS.gene050633:CDS | 45.0% | |
| GAGTGGGTGGCATTTAGTAT+GGG | + | chr7.3:1106372-1106391 | None:intergenic | 45.0% | |
| GCATAAGTTGCCAATTCAGG+TGG | + | chr7.3:1106067-1106086 | None:intergenic | 45.0% | |
| GGACTCACTGAGGTTAAAGT+TGG | - | chr7.3:1106178-1106197 | MS.gene050633:intron | 45.0% | |
| GGCGCAGAGTATAAAACTGT+GGG | - | chr7.3:1106576-1106595 | MS.gene050633:intron | 45.0% | |
| GGTCCGATATATCTGCATTG+TGG | + | chr7.3:1104939-1104958 | None:intergenic | 45.0% | |
| GGTGGCATTTAGTATGGGAA+AGG | + | chr7.3:1106367-1106386 | None:intergenic | 45.0% | |
| TCATTCTCAAGCTGTGTGAG+AGG | + | chr7.3:1106124-1106143 | None:intergenic | 45.0% | |
| TGACATAGCAGATGAGGTCA+AGG | + | chr7.3:1107454-1107473 | None:intergenic | 45.0% | |
| TGAGTACTTACCTGTTGGAG+TGG | + | chr7.3:1106227-1106246 | None:intergenic | 45.0% | |
| TGGCGCAGAGTATAAAACTG+TGG | - | chr7.3:1106575-1106594 | MS.gene050633:intron | 45.0% | |
| TGTGTAGGACCTACACATCT+TGG | + | chr7.3:1108267-1108286 | None:intergenic | 45.0% | |
| TTTCCGCGAGGAAGTTCAAT+TGG | - | chr7.3:1105661-1105680 | MS.gene050633:intron | 45.0% | |
| ! | ATCGGACCTCTTTTGCCTAT+AGG | - | chr7.3:1104951-1104970 | MS.gene050633:CDS | 45.0% |
| ! | CCTCTTTTGCCTATAGGAAC+AGG | - | chr7.3:1104957-1104976 | MS.gene050633:CDS | 45.0% |
| ! | CCTTTGTGTACTGCTGACTA+TGG | - | chr7.3:1105998-1106017 | MS.gene050633:intron | 45.0% |
| ! | CTTGGTGGTTTGACCATCTT+TGG | - | chr7.3:1107261-1107280 | MS.gene050633:CDS | 45.0% |
| ! | GACAAGTCTTTTGTCGATGC+AGG | - | chr7.3:1108114-1108133 | MS.gene050633:CDS | 45.0% |
| ! | GTAAAACTGAGGCACTATGC+AGG | - | chr7.3:1105968-1105987 | MS.gene050633:intron | 45.0% |
| ! | TAATTTTGCCGCTGCTTCCA+CGG | + | chr7.3:1107956-1107975 | None:intergenic | 45.0% |
| ! | TACGTAGTTCCCTGGTTCTT+TGG | + | chr7.3:1108031-1108050 | None:intergenic | 45.0% |
| !! | CCTTAGAACTTCGGGTTGTT+AGG | - | chr7.3:1108172-1108191 | MS.gene050633:CDS | 45.0% |
| !! | GAACTTCGGGTTGTTAGGAA+AGG | - | chr7.3:1108177-1108196 | MS.gene050633:CDS | 45.0% |
| !! | GTCTAAGTTGGTCCCAAAGA+TGG | + | chr7.3:1107277-1107296 | None:intergenic | 45.0% |
| AGCAGTTCGAATGGAGGGAA+CGG | + | chr7.3:1105795-1105814 | None:intergenic | 50.0% | |
| CCGGCTGAGGATTAACACAA+AGG | + | chr7.3:1106156-1106175 | None:intergenic | 50.0% | |
| GAACCGTACTCTTGCAGTTC+TGG | - | chr7.3:1104860-1104879 | MS.gene050633:CDS | 50.0% | |
| GATGCTTCTCCCATTCTCAC+TGG | - | chr7.3:1104725-1104744 | MS.gene050633:CDS | 50.0% | |
| GCTGACTATGGAGCTTCTGA+AGG | - | chr7.3:1106010-1106029 | MS.gene050633:intron | 50.0% | |
| GTGCCAGAACTGCAAGAGTA+CGG | + | chr7.3:1104866-1104885 | None:intergenic | 50.0% | |
| TCCATTTGCTTCCCTAGACC+CGG | - | chr7.3:1106749-1106768 | MS.gene050633:CDS | 50.0% | |
| TGTGTTAATCCTCAGCCGGT+GGG | - | chr7.3:1106157-1106176 | MS.gene050633:intron | 50.0% | |
| TTAACCTCAGTGAGTCCCAC+CGG | + | chr7.3:1106175-1106194 | None:intergenic | 50.0% | |
| TTGTGTTAATCCTCAGCCGG+TGG | - | chr7.3:1106156-1106175 | MS.gene050633:intron | 50.0% | |
| ! | ACTATGGAGCTTCTGAAGGG+TGG | - | chr7.3:1106014-1106033 | MS.gene050633:intron | 50.0% |
| !! | ATGCGGACTAATTTTCCGCG+AGG | - | chr7.3:1105649-1105668 | MS.gene050633:intron | 50.0% |
| ACAGTTAGCCGTGGAAGCAG+CGG | - | chr7.3:1107945-1107964 | MS.gene050633:intron | 55.0% | |
| ACCGGGTCTAGGGAAGCAAA+TGG | + | chr7.3:1106753-1106772 | None:intergenic | 55.0% | |
| AGGGTAAGAGTTCCCCACCA+TGG | + | chr7.3:1106347-1106366 | None:intergenic | 55.0% | |
| ATTTGCTTCCCTAGACCCGG+TGG | - | chr7.3:1106752-1106771 | MS.gene050633:CDS | 55.0% | |
| CAGGTATAGGCTAGGGGATG+TGG | - | chr7.3:1107819-1107838 | MS.gene050633:intron | 55.0% | |
| GGGTAAGAGTTCCCCACCAT+GGG | + | chr7.3:1106346-1106365 | None:intergenic | 55.0% | |
| TCCATTGACCACCGGGTCTA+GGG | + | chr7.3:1106763-1106782 | None:intergenic | 55.0% | |
| ! | GCAGTTCTGGCACTACGCAA+GGG | - | chr7.3:1104873-1104892 | MS.gene050633:CDS | 55.0% |
| ! | GGTTTGGCTCCATTGACCAC+CGG | + | chr7.3:1106771-1106790 | None:intergenic | 55.0% |
| ! | GTTTGGCTCCATTGACCACC+GGG | + | chr7.3:1106770-1106789 | None:intergenic | 55.0% |
| ! | TGCAGTTCTGGCACTACGCA+AGG | - | chr7.3:1104872-1104891 | MS.gene050633:CDS | 55.0% |
| CTCCATTGACCACCGGGTCT+AGG | + | chr7.3:1106764-1106783 | None:intergenic | 60.0% | |
| TCCCTAGACCCGGTGGTCAA+TGG | - | chr7.3:1106759-1106778 | MS.gene050633:CDS | 60.0% | |
| TCAGCCGGTGGGACTCACTG+AGG | - | chr7.3:1106168-1106187 | MS.gene050633:intron | 65.0% | |
| ! | TCAGTGAGTCCCACCGGCTG+AGG | + | chr7.3:1106169-1106188 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 1104482 | 1108353 | 1104482 | ID=MS.gene050633 |
| chr7.3 | mRNA | 1104482 | 1108353 | 1104482 | ID=MS.gene050633.t1;Parent=MS.gene050633 |
| chr7.3 | exon | 1108061 | 1108353 | 1108061 | ID=MS.gene050633.t1.exon1;Parent=MS.gene050633.t1 |
| chr7.3 | CDS | 1108061 | 1108353 | 1108061 | ID=cds.MS.gene050633.t1;Parent=MS.gene050633.t1 |
| chr7.3 | exon | 1107857 | 1107958 | 1107857 | ID=MS.gene050633.t1.exon2;Parent=MS.gene050633.t1 |
| chr7.3 | CDS | 1107857 | 1107958 | 1107857 | ID=cds.MS.gene050633.t1;Parent=MS.gene050633.t1 |
| chr7.3 | exon | 1106600 | 1107402 | 1106600 | ID=MS.gene050633.t1.exon3;Parent=MS.gene050633.t1 |
| chr7.3 | CDS | 1106600 | 1107402 | 1106600 | ID=cds.MS.gene050633.t1;Parent=MS.gene050633.t1 |
| chr7.3 | exon | 1104482 | 1105023 | 1104482 | ID=MS.gene050633.t1.exon4;Parent=MS.gene050633.t1 |
| chr7.3 | CDS | 1104482 | 1105023 | 1104482 | ID=cds.MS.gene050633.t1;Parent=MS.gene050633.t1 |
| Gene Sequence |
| Protein sequence |
