Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93177.t1 | XP_013466477.1 | 95.1 | 488 | 24 | 0 | 1 | 488 | 1 | 488 | 3.60E-265 | 923.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93177.t1 | Q70DU8 | 70.1 | 481 | 144 | 0 | 8 | 488 | 4 | 484 | 2.1e-202 | 706.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93177.t1 | A0A072VFE4 | 95.1 | 488 | 24 | 0 | 1 | 488 | 1 | 488 | 2.6e-265 | 923.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene89630 | MS.gene93177 | PPI |
| MS.gene012582 | MS.gene93177 | PPI |
| MS.gene016051 | MS.gene93177 | PPI |
| MS.gene012075 | MS.gene93177 | PPI |
| MS.gene035576 | MS.gene93177 | PPI |
| MS.gene76463 | MS.gene93177 | PPI |
| MS.gene042286 | MS.gene93177 | PPI |
| MS.gene030576 | MS.gene93177 | PPI |
| MS.gene62087 | MS.gene93177 | PPI |
| MS.gene49712 | MS.gene93177 | PPI |
| MS.gene025244 | MS.gene93177 | PPI |
| MS.gene037163 | MS.gene93177 | PPI |
| MS.gene64463 | MS.gene93177 | PPI |
| MS.gene057392 | MS.gene93177 | PPI |
| MS.gene70176 | MS.gene93177 | PPI |
| MS.gene33139 | MS.gene93177 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93177.t1 | MTR_1g029840 | 95.082 | 488 | 24 | 0 | 1 | 488 | 1 | 488 | 0.0 | 961 |
| MS.gene93177.t1 | MTR_1g029840 | 88.773 | 481 | 54 | 0 | 8 | 488 | 8 | 488 | 0.0 | 879 |
| MS.gene93177.t1 | MTR_3g088150 | 78.378 | 481 | 104 | 0 | 6 | 486 | 8 | 488 | 0.0 | 810 |
| MS.gene93177.t1 | MTR_8g094600 | 66.529 | 484 | 162 | 0 | 3 | 486 | 56 | 539 | 0.0 | 692 |
| MS.gene93177.t1 | MTR_8g076480 | 50.333 | 451 | 224 | 0 | 20 | 470 | 13 | 463 | 1.02e-167 | 482 |
| MS.gene93177.t1 | MTR_2g097950 | 47.599 | 479 | 248 | 1 | 11 | 486 | 15 | 493 | 1.46e-157 | 457 |
| MS.gene93177.t1 | MTR_4g065040 | 52.203 | 454 | 214 | 1 | 20 | 470 | 9 | 462 | 1.11e-147 | 431 |
| MS.gene93177.t1 | MTR_2g097950 | 45.168 | 476 | 229 | 2 | 11 | 486 | 15 | 458 | 1.85e-140 | 412 |
| MS.gene93177.t1 | MTR_1222s0010 | 36.220 | 381 | 231 | 5 | 19 | 395 | 8 | 380 | 4.75e-80 | 263 |
| MS.gene93177.t1 | MTR_1314s0010 | 36.982 | 338 | 203 | 4 | 116 | 445 | 1 | 336 | 2.94e-74 | 238 |
| MS.gene93177.t1 | MTR_2g034160 | 25.111 | 450 | 305 | 10 | 34 | 466 | 106 | 540 | 5.41e-37 | 144 |
| MS.gene93177.t1 | MTR_4g106510 | 29.640 | 361 | 239 | 8 | 95 | 445 | 130 | 485 | 5.75e-36 | 140 |
| MS.gene93177.t1 | MTR_3g078550 | 29.917 | 361 | 238 | 7 | 95 | 445 | 100 | 455 | 1.45e-35 | 138 |
| MS.gene93177.t1 | MTR_3g078550 | 29.917 | 361 | 238 | 7 | 95 | 445 | 130 | 485 | 1.69e-35 | 138 |
| MS.gene93177.t1 | MTR_2g067660 | 26.812 | 414 | 284 | 10 | 42 | 446 | 112 | 515 | 3.29e-35 | 138 |
| MS.gene93177.t1 | MTR_3g078490 | 29.178 | 353 | 233 | 8 | 103 | 445 | 170 | 515 | 2.51e-33 | 132 |
| MS.gene93177.t1 | MTR_4g107040 | 29.446 | 343 | 232 | 7 | 111 | 446 | 196 | 535 | 7.09e-31 | 125 |
| MS.gene93177.t1 | MTR_8g064170 | 28.256 | 407 | 276 | 10 | 48 | 446 | 134 | 532 | 1.45e-30 | 125 |
| MS.gene93177.t1 | MTR_3g078170 | 30.321 | 343 | 229 | 8 | 111 | 446 | 194 | 533 | 2.57e-30 | 124 |
| MS.gene93177.t1 | MTR_8g083530 | 29.395 | 347 | 219 | 12 | 115 | 446 | 159 | 494 | 1.27e-28 | 119 |
| MS.gene93177.t1 | MTR_6g086300 | 28.857 | 350 | 227 | 11 | 110 | 446 | 153 | 493 | 3.25e-26 | 112 |
| MS.gene93177.t1 | MTR_6g086300 | 28.857 | 350 | 227 | 11 | 110 | 446 | 153 | 493 | 3.25e-26 | 112 |
| MS.gene93177.t1 | MTR_6g086340 | 27.551 | 392 | 250 | 15 | 77 | 445 | 110 | 490 | 2.22e-24 | 106 |
| MS.gene93177.t1 | MTR_4g131180 | 25.111 | 450 | 300 | 12 | 1 | 429 | 35 | 468 | 3.77e-24 | 105 |
| MS.gene93177.t1 | MTR_8g064170 | 26.238 | 404 | 256 | 12 | 48 | 446 | 134 | 500 | 3.80e-21 | 96.7 |
| MS.gene93177.t1 | MTR_4g131180 | 24.773 | 440 | 294 | 12 | 1 | 419 | 35 | 458 | 6.16e-21 | 95.9 |
| MS.gene93177.t1 | MTR_2g009750 | 27.390 | 387 | 233 | 14 | 48 | 406 | 80 | 446 | 7.92e-21 | 95.9 |
| MS.gene93177.t1 | MTR_2g009750 | 27.390 | 387 | 233 | 14 | 48 | 406 | 79 | 445 | 8.03e-21 | 95.9 |
| MS.gene93177.t1 | MTR_4g020720 | 42.308 | 130 | 66 | 4 | 183 | 306 | 116 | 242 | 9.56e-21 | 92.4 |
| MS.gene93177.t1 | MTR_1g014320 | 25.310 | 403 | 282 | 10 | 37 | 429 | 75 | 468 | 1.50e-20 | 94.7 |
| MS.gene93177.t1 | MTR_3g078170 | 29.961 | 257 | 172 | 7 | 111 | 360 | 194 | 449 | 2.06e-20 | 94.0 |
| MS.gene93177.t1 | MTR_2g009750 | 27.132 | 387 | 235 | 14 | 48 | 406 | 80 | 447 | 2.81e-20 | 94.0 |
| MS.gene93177.t1 | MTR_8g083520 | 25.000 | 396 | 232 | 14 | 73 | 446 | 20 | 372 | 3.75e-19 | 89.7 |
| MS.gene93177.t1 | MTR_8g083520 | 25.000 | 396 | 232 | 14 | 73 | 446 | 100 | 452 | 6.06e-19 | 89.7 |
| MS.gene93177.t1 | MTR_4g093170 | 26.623 | 308 | 205 | 8 | 113 | 406 | 174 | 474 | 2.34e-18 | 88.2 |
| MS.gene93177.t1 | MTR_2g042330 | 23.615 | 343 | 244 | 8 | 113 | 442 | 152 | 489 | 7.71e-17 | 83.6 |
| MS.gene93177.t1 | MTR_3g078490 | 33.889 | 180 | 109 | 5 | 103 | 277 | 140 | 314 | 2.00e-16 | 81.3 |
| MS.gene93177.t1 | MTR_3g078170 | 28.992 | 238 | 161 | 7 | 111 | 341 | 194 | 430 | 6.69e-16 | 80.1 |
| MS.gene93177.t1 | MTR_3g078170 | 28.992 | 238 | 161 | 7 | 111 | 341 | 194 | 430 | 8.59e-16 | 79.7 |
| MS.gene93177.t1 | MTR_4g020710 | 52.941 | 68 | 32 | 0 | 301 | 368 | 16 | 83 | 1.07e-15 | 74.3 |
| MS.gene93177.t1 | MTR_8g083530 | 35.099 | 151 | 89 | 5 | 115 | 259 | 159 | 306 | 2.94e-13 | 71.6 |
| MS.gene93177.t1 | MTR_1399s0020 | 29.688 | 192 | 128 | 5 | 252 | 440 | 145 | 332 | 3.67e-13 | 71.2 |
| MS.gene93177.t1 | MTR_1690s0010 | 26.786 | 280 | 173 | 11 | 48 | 312 | 83 | 345 | 2.87e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93177.t1 | AT1G44170 | 70.062 | 481 | 144 | 0 | 8 | 488 | 4 | 484 | 0.0 | 730 |
| MS.gene93177.t1 | AT1G44170 | 70.062 | 481 | 144 | 0 | 8 | 488 | 4 | 484 | 0.0 | 730 |
| MS.gene93177.t1 | AT1G44170 | 73.850 | 413 | 108 | 0 | 76 | 488 | 9 | 421 | 0.0 | 663 |
| MS.gene93177.t1 | AT4G34240 | 65.489 | 481 | 166 | 0 | 6 | 486 | 65 | 545 | 0.0 | 654 |
| MS.gene93177.t1 | AT4G34240 | 65.489 | 481 | 166 | 0 | 6 | 486 | 50 | 530 | 0.0 | 654 |
| MS.gene93177.t1 | AT4G34240 | 70.823 | 401 | 117 | 0 | 86 | 486 | 3 | 403 | 0.0 | 586 |
| MS.gene93177.t1 | AT4G36250 | 46.809 | 470 | 247 | 1 | 20 | 486 | 12 | 481 | 5.45e-163 | 470 |
| MS.gene93177.t1 | AT4G34240 | 65.644 | 326 | 112 | 0 | 6 | 331 | 65 | 390 | 2.96e-151 | 437 |
| MS.gene93177.t1 | AT3G66658 | 27.064 | 436 | 292 | 8 | 34 | 451 | 106 | 533 | 1.10e-40 | 154 |
| MS.gene93177.t1 | AT3G66658 | 26.569 | 478 | 316 | 10 | 34 | 484 | 106 | 575 | 2.17e-40 | 154 |
| MS.gene93177.t1 | AT1G74920 | 29.781 | 366 | 241 | 9 | 95 | 449 | 125 | 485 | 9.26e-40 | 150 |
| MS.gene93177.t1 | AT1G74920 | 29.781 | 366 | 241 | 9 | 95 | 449 | 130 | 490 | 1.05e-39 | 150 |
| MS.gene93177.t1 | AT1G23800 | 28.090 | 445 | 302 | 11 | 12 | 446 | 89 | 525 | 4.34e-36 | 140 |
| MS.gene93177.t1 | AT1G79440 | 28.193 | 415 | 277 | 11 | 42 | 446 | 118 | 521 | 2.57e-35 | 138 |
| MS.gene93177.t1 | AT3G48170 | 28.488 | 344 | 231 | 7 | 112 | 445 | 147 | 485 | 8.32e-35 | 136 |
| MS.gene93177.t1 | AT3G48000 | 27.434 | 452 | 296 | 14 | 12 | 446 | 93 | 529 | 3.76e-29 | 120 |
| MS.gene93177.t1 | AT3G24503 | 27.114 | 343 | 236 | 9 | 113 | 446 | 155 | 492 | 3.65e-27 | 114 |
| MS.gene93177.t1 | AT2G24270 | 24.888 | 446 | 306 | 13 | 1 | 429 | 75 | 508 | 2.13e-21 | 97.8 |
| MS.gene93177.t1 | AT2G24270 | 24.888 | 446 | 306 | 13 | 1 | 429 | 35 | 468 | 2.71e-21 | 97.1 |
| MS.gene93177.t1 | AT2G24270 | 24.888 | 446 | 306 | 13 | 1 | 429 | 35 | 468 | 3.00e-21 | 97.1 |
| MS.gene93177.t1 | AT2G24270 | 24.888 | 446 | 306 | 13 | 1 | 429 | 35 | 468 | 3.00e-21 | 97.1 |
| MS.gene93177.t1 | AT1G54100 | 22.714 | 339 | 246 | 7 | 116 | 442 | 154 | 488 | 2.97e-20 | 94.0 |
| MS.gene93177.t1 | AT1G54100 | 22.714 | 339 | 246 | 7 | 116 | 442 | 154 | 488 | 2.97e-20 | 94.0 |
| MS.gene93177.t1 | AT2G14170 | 25.648 | 386 | 252 | 15 | 78 | 445 | 109 | 477 | 2.93e-18 | 87.8 |
| MS.gene93177.t1 | AT2G14170 | 25.648 | 386 | 252 | 15 | 78 | 445 | 218 | 586 | 3.26e-18 | 88.2 |
| MS.gene93177.t1 | AT2G14170 | 25.797 | 345 | 224 | 13 | 78 | 406 | 218 | 546 | 1.06e-16 | 83.2 |
| MS.gene93177.t1 | AT1G23800 | 28.627 | 255 | 169 | 7 | 12 | 259 | 89 | 337 | 2.14e-16 | 81.6 |
Find 94 sgRNAs with CRISPR-Local
Find 360 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGGATGATGACAAAGTTTC+TGG | 0.156174 | 1.3:-15788385 | MS.gene93177:CDS |
| GCTATAATTCGTGCCTTATT+TGG | 0.169978 | 1.3:-15786926 | MS.gene93177:CDS |
| CGATCGCTTGATAAAGCTTT+TGG | 0.222465 | 1.3:-15788404 | MS.gene93177:CDS |
| TTATCACTTGATCCAGTAAT+TGG | 0.232948 | 1.3:-15789513 | MS.gene93177:CDS |
| GCAATTCATACTTTGCCTTT+TGG | 0.268675 | 1.3:-15787124 | MS.gene93177:CDS |
| TGATTCAAATATCAACTTAC+AGG | 0.279419 | 1.3:-15788935 | MS.gene93177:intron |
| ATTCTAGGCCCTTCCAAATA+AGG | 0.301994 | 1.3:+15786913 | None:intergenic |
| GCTGCAATAGCCCCAATTAC+TGG | 0.305450 | 1.3:+15789501 | None:intergenic |
| ATTTATCATGACGAATGAAT+TGG | 0.307322 | 1.3:-15792964 | None:intergenic |
| TTTGTTGTTATGATATAATC+TGG | 0.316109 | 1.3:+15788622 | None:intergenic |
| GATTAGCCCTACTGTTCTAT+TGG | 0.328993 | 1.3:-15788215 | MS.gene93177:CDS |
| AGCTTTGATGTGATAAATTC+AGG | 0.353189 | 1.3:-15787829 | MS.gene93177:CDS |
| GACTGTTTCTGCTGGTGGTT+TGG | 0.353589 | 1.3:-15787743 | MS.gene93177:CDS |
| CATCAATCTCATCTTTGTAT+TGG | 0.356661 | 1.3:+15786976 | None:intergenic |
| TCCAGCCACATCATCGTTGC+TGG | 0.362338 | 1.3:-15789442 | MS.gene93177:CDS |
| GTTTCTGGTAAGATTGTTCA+TGG | 0.366193 | 1.3:-15788370 | MS.gene93177:CDS |
| CCTCCAAGCTCCAGCACAAC+TGG | 0.367836 | 1.3:+15788976 | None:intergenic |
| CTGAGACAAACATTTGGTTC+TGG | 0.403023 | 1.3:-15792891 | MS.gene93177:CDS |
| CTCATCTTTGTATTGGTGTA+TGG | 0.403429 | 1.3:+15786983 | None:intergenic |
| TATCACTTGATCCAGTAATT+GGG | 0.409496 | 1.3:-15789512 | MS.gene93177:CDS |
| ACACCAGTTGTGCTGGAGCT+TGG | 0.416382 | 1.3:-15788979 | MS.gene93177:CDS |
| ATATTTGAATCAACAACAAC+TGG | 0.421798 | 1.3:+15788946 | None:intergenic |
| CTTAATTCGTACCGTGATGA+TGG | 0.427177 | 1.3:+15788138 | None:intergenic |
| AGATAATAACCGAACCTCAT+AGG | 0.441099 | 1.3:+15792740 | None:intergenic |
| ATAATGAGCGAAGAGATATT+TGG | 0.444128 | 1.3:-15788172 | MS.gene93177:CDS |
| TCGTTGCTGGCAAAACTGTT+AGG | 0.451153 | 1.3:-15789429 | MS.gene93177:CDS |
| TTTGTTAAGACTGTTTCTGC+TGG | 0.453254 | 1.3:-15787751 | MS.gene93177:CDS |
| GATTGTTCATGGAGGTGAAA+AGG | 0.454910 | 1.3:-15788359 | MS.gene93177:CDS |
| GATACTATTTCAGCTGAAGA+AGG | 0.460660 | 1.3:+15789901 | None:intergenic |
| GCATTGGATGGCTCCGGAAA+AGG | 0.463175 | 1.3:-15790047 | MS.gene93177:intron |
| ATTGCAAGGTGGCAACTAGA+AGG | 0.464455 | 1.3:-15788693 | MS.gene93177:intron |
| GGAGTAGGTGAGAGTGGAGT+GGG | 0.469025 | 1.3:-15787100 | MS.gene93177:CDS |
| CTGTATTACTGCAACAAAAG+TGG | 0.474056 | 1.3:-15789350 | MS.gene93177:CDS |
| ATATATGCAGCAAGAGGCTT+CGG | 0.476234 | 1.3:+15787805 | None:intergenic |
| AATGAACTGAGACAAACATT+TGG | 0.478069 | 1.3:-15792897 | MS.gene93177:CDS |
| GCACCTTACACCAGTTGTGC+TGG | 0.485174 | 1.3:-15788986 | MS.gene93177:CDS |
| GTTAAGACTGTTTCTGCTGG+TGG | 0.490673 | 1.3:-15787748 | MS.gene93177:CDS |
| CTCATCTATAAGAGTTGTTG+AGG | 0.493781 | 1.3:-15789391 | MS.gene93177:CDS |
| CCAGTTGTGCTGGAGCTTGG+AGG | 0.497518 | 1.3:-15788976 | MS.gene93177:CDS |
| CACTCAAGGAATTGAAGCAT+TGG | 0.498600 | 1.3:-15790063 | MS.gene93177:CDS |
| GAAGGATAATCGCTGGAAAG+TGG | 0.505649 | 1.3:-15788675 | MS.gene93177:CDS |
| CTCATGTAAAACTGCACTCA+AGG | 0.507865 | 1.3:-15790077 | MS.gene93177:CDS |
| GAGATTGATGAAGGCTCTCA+TGG | 0.510072 | 1.3:-15786963 | MS.gene93177:CDS |
| GCTCCAGCACAACTGGTGTA+AGG | 0.510660 | 1.3:+15788983 | None:intergenic |
| GGAAAGTGGGGTTGCAACAA+TGG | 0.510938 | 1.3:-15788661 | MS.gene93177:CDS |
| TACAAAGATGAGATTGATGA+AGG | 0.513208 | 1.3:-15786972 | MS.gene93177:CDS |
| AAGAGTGGCACGCATTGTTA+TGG | 0.524412 | 1.3:-15789022 | MS.gene93177:CDS |
| AAGGATAATCGCTGGAAAGT+GGG | 0.525366 | 1.3:-15788674 | MS.gene93177:CDS |
| ATTGAAGCATTGGATGGCTC+CGG | 0.525858 | 1.3:-15790053 | MS.gene93177:CDS |
| AAAAGACTATGCTCCTAAGT+TGG | 0.527792 | 1.3:-15788602 | MS.gene93177:intron |
| TAATTCGTGCCTTATTTGGA+AGG | 0.530992 | 1.3:-15786922 | MS.gene93177:CDS |
| CAATGAAGCGGGATCCATGC+TGG | 0.534188 | 1.3:-15792922 | MS.gene93177:CDS |
| ATGAAGGCTCTCATGGGTGG+TGG | 0.534832 | 1.3:-15786956 | MS.gene93177:CDS |
| GCCAGCAACGATGATGTGGC+TGG | 0.536814 | 1.3:+15789441 | None:intergenic |
| TTTGGAGGAGTAGGTGAGAG+TGG | 0.537231 | 1.3:-15787106 | MS.gene93177:CDS |
| GGGACATCCAATAGAACAGT+AGG | 0.538615 | 1.3:+15788208 | None:intergenic |
| TCTCAGTTCATTCACCAGCA+TGG | 0.539045 | 1.3:+15792908 | None:intergenic |
| CTCTCACCTACTCCTCCAAA+AGG | 0.540508 | 1.3:+15787109 | None:intergenic |
| TCTTGAAACTGTCGCCTATG+AGG | 0.543885 | 1.3:-15792754 | MS.gene93177:intron |
| GTAATTGGGGCTATTGCAGC+TGG | 0.545653 | 1.3:-15789498 | MS.gene93177:CDS |
| ATCACTTGATCCAGTAATTG+GGG | 0.548933 | 1.3:-15789511 | MS.gene93177:CDS |
| AATATGTTCGACAATGAAGC+GGG | 0.550123 | 1.3:-15792933 | MS.gene93177:CDS |
| ATCTTTGTATTGGTGTATGG+TGG | 0.551950 | 1.3:+15786986 | None:intergenic |
| TCATCTATAAGAGTTGTTGA+GGG | 0.559074 | 1.3:-15789390 | MS.gene93177:CDS |
| AGGAGTAGGTGAGAGTGGAG+TGG | 0.559793 | 1.3:-15787101 | MS.gene93177:CDS |
| TGTATTACTGCAACAAAAGT+GGG | 0.565567 | 1.3:-15789349 | MS.gene93177:CDS |
| GCAACTAGAAGGATAATCGC+TGG | 0.565895 | 1.3:-15788682 | MS.gene93177:CDS |
| AATTCGTGCCTTATTTGGAA+GGG | 0.566567 | 1.3:-15786921 | MS.gene93177:CDS |
| GTAAATATATATGCAGCAAG+AGG | 0.571237 | 1.3:+15787799 | None:intergenic |
| TTAATTCGTACCGTGATGAT+GGG | 0.573561 | 1.3:+15788139 | None:intergenic |
| ACCGTGATGATGGGAAGTAA+TGG | 0.581585 | 1.3:+15788148 | None:intergenic |
| CAAGGAATTGAAGCATTGGA+TGG | 0.593249 | 1.3:-15790059 | MS.gene93177:CDS |
| CATAGGCGACAGTTTCAAGA+GGG | 0.597623 | 1.3:+15792757 | None:intergenic |
| TAGGCGACAGTTTCAAGAGG+GGG | 0.599399 | 1.3:+15792759 | None:intergenic |
| AGGATAATCGCTGGAAAGTG+GGG | 0.609873 | 1.3:-15788673 | MS.gene93177:CDS |
| GTGGCTGGAGAAATTTCTGA+TGG | 0.612827 | 1.3:+15789456 | None:intergenic |
| GAATATGTTCGACAATGAAG+CGG | 0.619480 | 1.3:-15792934 | MS.gene93177:CDS |
| TATTGCAGCTGGTAATGCTG+TGG | 0.620073 | 1.3:-15789487 | MS.gene93177:CDS |
| AAAACTGTTAGGAGAATACA+TGG | 0.624224 | 1.3:-15789418 | MS.gene93177:CDS |
| TCCATTACTTCCCATCATCA+CGG | 0.627032 | 1.3:-15788149 | MS.gene93177:intron |
| TACAAACGACAAGAAGCTCA+AGG | 0.637163 | 1.3:-15787779 | MS.gene93177:CDS |
| GAAATAGTATCTGAACCACT+TGG | 0.643478 | 1.3:-15789889 | MS.gene93177:CDS |
| AGTGGAGTGGGTGCATACCA+TGG | 0.646385 | 1.3:-15787088 | MS.gene93177:CDS |
| GGACATCCAATAGAACAGTA+GGG | 0.647357 | 1.3:+15788209 | None:intergenic |
| ATGATCAACACAACTCCAAG+TGG | 0.650557 | 1.3:+15789874 | None:intergenic |
| GCTTTATCAAGCGATCGAAG+TGG | 0.653845 | 1.3:+15788410 | None:intergenic |
| TTGTGTTGATCATCTCTGCA+TGG | 0.653993 | 1.3:-15789864 | MS.gene93177:CDS |
| AGATTGATGAAGGCTCTCAT+GGG | 0.665748 | 1.3:-15786962 | MS.gene93177:CDS |
| TCATAGGCGACAGTTTCAAG+AGG | 0.669261 | 1.3:+15792756 | None:intergenic |
| CTCATTATCAGAGAATCACG+CGG | 0.673973 | 1.3:+15788187 | None:intergenic |
| TTGATGAAGGCTCTCATGGG+TGG | 0.678752 | 1.3:-15786959 | MS.gene93177:CDS |
| TCTGGTAAGATTGTTCATGG+AGG | 0.703693 | 1.3:-15788367 | MS.gene93177:CDS |
| ATAGGCGACAGTTTCAAGAG+GGG | 0.706757 | 1.3:+15792758 | None:intergenic |
| TCATTATCAGAGAATCACGC+GGG | 0.717383 | 1.3:+15788188 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTAATTTTTTTTTTTTTTT+TGG | - | chr1.3:15787291-15787310 | MS.gene93177:intron | 0.0% |
| !!! | AAATATTTTAACATACAAAA+TGG | + | chr1.3:15790041-15790060 | None:intergenic | 10.0% |
| !!! | AATTAAAATTTGCATTTTTT+TGG | - | chr1.3:15788016-15788035 | MS.gene93177:intron | 10.0% |
| !!! | TAATAATTTTTTTCATATCA+TGG | + | chr1.3:15789486-15789505 | None:intergenic | 10.0% |
| !!! | TTAAGTATATCTTTTTAAAA+TGG | - | chr1.3:15788163-15788182 | MS.gene93177:CDS | 10.0% |
| !! | AACATAAAAGCTTATTATTT+GGG | + | chr1.3:15787724-15787743 | None:intergenic | 15.0% |
| !! | ATACTAATAATAATAAGAAG+AGG | + | chr1.3:15787174-15787193 | None:intergenic | 15.0% |
| !! | GAAATTTATTCAAATAAAAG+TGG | - | chr1.3:15792517-15792536 | MS.gene93177:intron | 15.0% |
| !! | TAACATAAAAGCTTATTATT+TGG | + | chr1.3:15787725-15787744 | None:intergenic | 15.0% |
| !! | TCATTTCATTAGAAAATATA+TGG | + | chr1.3:15792450-15792469 | None:intergenic | 15.0% |
| !! | TGAAATAAATATCATTACTA+TGG | + | chr1.3:15788972-15788991 | None:intergenic | 15.0% |
| !!! | ATTTGTGTTATTTTAGTTTT+TGG | - | chr1.3:15789139-15789158 | MS.gene93177:intron | 15.0% |
| !!! | CAAACATTATCTTTAATTTT+GGG | + | chr1.3:15788802-15788821 | None:intergenic | 15.0% |
| !!! | CATTTATTGTTGTTATTTAT+GGG | - | chr1.3:15787336-15787355 | MS.gene93177:intron | 15.0% |
| !!! | TAAAAATCCAAACTTAATTT+TGG | + | chr1.3:15787982-15788001 | None:intergenic | 15.0% |
| !!! | TCATTTATTGTTGTTATTTA+TGG | - | chr1.3:15787335-15787354 | MS.gene93177:intron | 15.0% |
| !!! | TTATTAGTATTATTCTTTTG+TGG | - | chr1.3:15787184-15787203 | MS.gene93177:intron | 15.0% |
| !! | ACTATTTAACAATACAAAGT+TGG | + | chr1.3:15788352-15788371 | None:intergenic | 20.0% |
| !! | ATCTGAATTCAAATAAATGA+TGG | - | chr1.3:15788111-15788130 | MS.gene93177:intron | 20.0% |
| !! | ATGTACTAATATTCATAAGT+TGG | + | chr1.3:15787813-15787832 | None:intergenic | 20.0% |
| !! | CCAAAATTAAAGATAATGTT+TGG | - | chr1.3:15788800-15788819 | MS.gene93177:intron | 20.0% |
| !! | TATGGTTTATAATTCTGAAT+TGG | - | chr1.3:15790597-15790616 | MS.gene93177:intron | 20.0% |
| !! | TATTTATATCTTCTCATACT+TGG | - | chr1.3:15789740-15789759 | MS.gene93177:intron | 20.0% |
| !! | TGTCAAAAATTGTATTGTTA+TGG | - | chr1.3:15792361-15792380 | MS.gene93177:intron | 20.0% |
| !! | TTAAAGATAATGTTTGGATT+TGG | - | chr1.3:15788806-15788825 | MS.gene93177:intron | 20.0% |
| !! | TTAACGATTAAGATATTGTT+AGG | + | chr1.3:15787248-15787267 | None:intergenic | 20.0% |
| !! | TTACTCAAATAAGTAATTGT+TGG | - | chr1.3:15790813-15790832 | MS.gene93177:intron | 20.0% |
| !! | TTTATTTAGTGTTTAGTGTT+TGG | - | chr1.3:15791338-15791357 | MS.gene93177:intron | 20.0% |
| !!! | ACATTTTGAATACTTTTAAC+AGG | - | chr1.3:15789540-15789559 | MS.gene93177:intron | 20.0% |
| !!! | ATTTTATGGAAAGAATCAAT+TGG | - | chr1.3:15791406-15791425 | MS.gene93177:intron | 20.0% |
| !!! | CATTTTGAATACTTTTAACA+GGG | - | chr1.3:15789541-15789560 | MS.gene93177:intron | 20.0% |
| !!! | CCAAACATTATCTTTAATTT+TGG | + | chr1.3:15788803-15788822 | None:intergenic | 20.0% |
| !!! | TAAGTAATTGTTGGTTTTTT+AGG | - | chr1.3:15790822-15790841 | MS.gene93177:intron | 20.0% |
| !!! | TTTGATAGCAAACTAATATT+AGG | - | chr1.3:15789437-15789456 | MS.gene93177:CDS | 20.0% |
| !!! | TTTGTTGTTATGATATAATC+TGG | + | chr1.3:15791254-15791273 | None:intergenic | 20.0% |
| ! | AAGTTTATTAAAATGATCCG+TGG | - | chr1.3:15790780-15790799 | MS.gene93177:intron | 25.0% |
| ! | AAGTTTGATAGAAAAACAGT+TGG | - | chr1.3:15789569-15789588 | MS.gene93177:intron | 25.0% |
| ! | AATAAGTCAATTCATTCAGA+CGG | - | chr1.3:15787876-15787895 | MS.gene93177:intron | 25.0% |
| ! | AGTAAATTTAAGTCTTAGTG+AGG | + | chr1.3:15791150-15791169 | None:intergenic | 25.0% |
| ! | AGTATAATAATTGAATGCAC+AGG | + | chr1.3:15789325-15789344 | None:intergenic | 25.0% |
| ! | AGTTTAAAAGCTTAAAAAGC+TGG | + | chr1.3:15787047-15787066 | None:intergenic | 25.0% |
| ! | ATATTTGAATCAACAACAAC+TGG | + | chr1.3:15790930-15790949 | None:intergenic | 25.0% |
| ! | CAAAAATTGTATTGTTATGG+AGG | - | chr1.3:15792364-15792383 | MS.gene93177:intron | 25.0% |
| ! | CATATAAAAATGACATTCAC+AGG | + | chr1.3:15792231-15792250 | None:intergenic | 25.0% |
| ! | GAAAAACTTATTACCAACTT+AGG | + | chr1.3:15791287-15791306 | None:intergenic | 25.0% |
| ! | GTATTTAACGAGTATTATTC+TGG | - | chr1.3:15791000-15791019 | MS.gene93177:intron | 25.0% |
| ! | TACTATGGTTTGAATACTTT+AGG | + | chr1.3:15788957-15788976 | None:intergenic | 25.0% |
| ! | TACTTGAACTTAAAATTGCA+AGG | - | chr1.3:15791166-15791185 | MS.gene93177:intron | 25.0% |
| ! | TCTTTCATGATTTGACAAAT+AGG | - | chr1.3:15789226-15789245 | MS.gene93177:intron | 25.0% |
| ! | TGATTCAAATATCAACTTAC+AGG | - | chr1.3:15790938-15790957 | MS.gene93177:intron | 25.0% |
| ! | TGTAGTTTCCTTATAACAAA+AGG | + | chr1.3:15791879-15791898 | None:intergenic | 25.0% |
| ! | TGTTAAATAGTTCCATGATA+TGG | - | chr1.3:15788361-15788380 | MS.gene93177:CDS | 25.0% |
| ! | TTGTACTAAATACCATATCA+TGG | + | chr1.3:15788376-15788395 | None:intergenic | 25.0% |
| ! | TTTCTGATAGAATAACCTAA+GGG | - | chr1.3:15790621-15790640 | MS.gene93177:intron | 25.0% |
| !! | ACTGAATTAGAGCAATTTTA+TGG | - | chr1.3:15791392-15791411 | MS.gene93177:intron | 25.0% |
| !! | CATTTTATCTATTTCCTAGT+TGG | + | chr1.3:15791914-15791933 | None:intergenic | 25.0% |
| !! | TTTTCTGATAGAATAACCTA+AGG | - | chr1.3:15790620-15790639 | MS.gene93177:intron | 25.0% |
| !!! | AAATTCCACCTTTTGTTATA+AGG | - | chr1.3:15791868-15791887 | MS.gene93177:intron | 25.0% |
| !!! | ACTTTGTTTTCTTAAATTCC+AGG | - | chr1.3:15791633-15791652 | MS.gene93177:intron | 25.0% |
| !!! | AGTTTGTTTTTGAGAGTTAT+AGG | - | chr1.3:15787635-15787654 | MS.gene93177:intron | 25.0% |
| !!! | ATCTACTATCACTTTTTGAA+AGG | - | chr1.3:15787572-15787591 | MS.gene93177:intron | 25.0% |
| !!! | ATTTTTTGCATTTATGCATG+TGG | - | chr1.3:15787926-15787945 | MS.gene93177:intron | 25.0% |
| !!! | CAAGATATTTTAATCCAACT+AGG | - | chr1.3:15791897-15791916 | MS.gene93177:intron | 25.0% |
| !!! | TCTACTATCACTTTTTGAAA+GGG | - | chr1.3:15787573-15787592 | MS.gene93177:intron | 25.0% |
| !!! | TGAACAAATTGTTATTTTCG+TGG | - | chr1.3:15788453-15788472 | MS.gene93177:CDS | 25.0% |
| AAAACTGTTAGGAGAATACA+TGG | - | chr1.3:15790455-15790474 | MS.gene93177:intron | 30.0% | |
| AAACCATAAAAGAAAACCAG+AGG | + | chr1.3:15790585-15790604 | None:intergenic | 30.0% | |
| AAAGACTGAAAGAGAGATTA+AGG | + | chr1.3:15790979-15790998 | None:intergenic | 30.0% | |
| AACCAACTTAAAAGCTGATT+TGG | + | chr1.3:15792281-15792300 | None:intergenic | 30.0% | |
| AACCATAAAAGAAAACCAGA+GGG | + | chr1.3:15790584-15790603 | None:intergenic | 30.0% | |
| AAGTATAACTTACTACAGTG+AGG | - | chr1.3:15792422-15792441 | MS.gene93177:intron | 30.0% | |
| AAGTGTAACAACACATATTG+TGG | + | chr1.3:15789069-15789088 | None:intergenic | 30.0% | |
| AATATCGTCAGTATAGATTG+AGG | + | chr1.3:15790312-15790331 | None:intergenic | 30.0% | |
| AATCTTCATCATTCTACTGT+TGG | + | chr1.3:15789031-15789050 | None:intergenic | 30.0% | |
| AATGAACTGAGACAAACATT+TGG | - | chr1.3:15786976-15786995 | MS.gene93177:CDS | 30.0% | |
| ACACAAATTCAAAAAACCAG+AGG | + | chr1.3:15789127-15789146 | None:intergenic | 30.0% | |
| AGACGATCCAAAATTAAGTT+TGG | - | chr1.3:15787972-15787991 | MS.gene93177:intron | 30.0% | |
| AGTTTCCTTATAACAAAAGG+TGG | + | chr1.3:15791876-15791895 | None:intergenic | 30.0% | |
| ATAAGAAGAGAGTTATTGCA+CGG | + | chr1.3:15788918-15788937 | None:intergenic | 30.0% | |
| ATAATGAGCGAAGAGATATT+TGG | - | chr1.3:15791701-15791720 | MS.gene93177:intron | 30.0% | |
| ATAGCAACACTTTAGATGTT+CGG | - | chr1.3:15788297-15788316 | MS.gene93177:intron | 30.0% | |
| ATATTCCAAATGTGTGAAAG+TGG | - | chr1.3:15788068-15788087 | MS.gene93177:intron | 30.0% | |
| ATCTTCATCATTCTACTGTT+GGG | + | chr1.3:15789030-15789049 | None:intergenic | 30.0% | |
| ATGAATGAATGATTACCCTT+AGG | + | chr1.3:15790639-15790658 | None:intergenic | 30.0% | |
| CAAAAGAAACTTGAGTGTTA+AGG | + | chr1.3:15789421-15789440 | None:intergenic | 30.0% | |
| CACATAAACTAAGAGATTCA+AGG | + | chr1.3:15792206-15792225 | None:intergenic | 30.0% | |
| CAGTCTATTTATCTGTTATG+AGG | - | chr1.3:15788191-15788210 | MS.gene93177:CDS | 30.0% | |
| CATCAATCTCATCTTTGTAT+TGG | + | chr1.3:15792900-15792919 | None:intergenic | 30.0% | |
| CGATTAAGATATTGTTAGGT+CGG | + | chr1.3:15787244-15787263 | None:intergenic | 30.0% | |
| GCTATTTAACAACACAATGT+TGG | + | chr1.3:15788273-15788292 | None:intergenic | 30.0% | |
| GTAAATATATATGCAGCAAG+AGG | + | chr1.3:15792077-15792096 | None:intergenic | 30.0% | |
| GTCTTGAATTATCTACACTA+TGG | - | chr1.3:15788865-15788884 | MS.gene93177:intron | 30.0% | |
| TAAACTAAGAGATTCAAGGA+TGG | + | chr1.3:15792202-15792221 | None:intergenic | 30.0% | |
| TAAATGCAAAAAATCCCAAC+AGG | + | chr1.3:15787920-15787939 | None:intergenic | 30.0% | |
| TACAAAGATGAGATTGATGA+AGG | - | chr1.3:15792901-15792920 | MS.gene93177:CDS | 30.0% | |
| TACTGAATGTTGCAAAATAG+CGG | + | chr1.3:15790188-15790207 | None:intergenic | 30.0% | |
| TATAGATTGAGGAAAGAACT+TGG | + | chr1.3:15790301-15790320 | None:intergenic | 30.0% | |
| TATCACTTGATCCAGTAATT+GGG | - | chr1.3:15790361-15790380 | MS.gene93177:intron | 30.0% | |
| TATTCCAAATGTGTGAAAGT+GGG | - | chr1.3:15788069-15788088 | MS.gene93177:intron | 30.0% | |
| TCATCTATAAGAGTTGTTGA+GGG | - | chr1.3:15790483-15790502 | MS.gene93177:intron | 30.0% | |
| TGAGTAAATGATATGATCCA+CGG | + | chr1.3:15790800-15790819 | None:intergenic | 30.0% | |
| TGTAAATAGAAGTTCAGTGA+AGG | - | chr1.3:15792249-15792268 | MS.gene93177:intron | 30.0% | |
| TGTATTACTGCAACAAAAGT+GGG | - | chr1.3:15790524-15790543 | MS.gene93177:intron | 30.0% | |
| TTATCACTTGATCCAGTAAT+TGG | - | chr1.3:15790360-15790379 | MS.gene93177:intron | 30.0% | |
| TTGAACTTAAAATTGCAAGG+TGG | - | chr1.3:15791169-15791188 | MS.gene93177:intron | 30.0% | |
| ! | AGCTTTGATGTGATAAATTC+AGG | - | chr1.3:15792044-15792063 | MS.gene93177:intron | 30.0% |
| ! | CATCAAATGAGAATTTTCCA+TGG | + | chr1.3:15792805-15792824 | None:intergenic | 30.0% |
| ! | GTGTCTTCAATCTGAAATAT+CGG | + | chr1.3:15792594-15792613 | None:intergenic | 30.0% |
| ! | TTATGGGTCCAGATTTTATT+GGG | - | chr1.3:15787352-15787371 | MS.gene93177:intron | 30.0% |
| ! | TTGTTTTCTTAAATTCCAGG+AGG | - | chr1.3:15791636-15791655 | MS.gene93177:intron | 30.0% |
| ! | TTTATGGGTCCAGATTTTAT+TGG | - | chr1.3:15787351-15787370 | MS.gene93177:intron | 30.0% |
| ! | TTTTTACCCCCAATAAAATC+TGG | + | chr1.3:15787363-15787382 | None:intergenic | 30.0% |
| !! | CTAATATTCATAAGTTGGTC+TGG | + | chr1.3:15787808-15787827 | None:intergenic | 30.0% |
| !!! | ATGTTTTGACCTGCATTAAA+GGG | + | chr1.3:15789938-15789957 | None:intergenic | 30.0% |
| !!! | ATTGTTGGTTTTTTAGGCAA+TGG | - | chr1.3:15790828-15790847 | MS.gene93177:intron | 30.0% |
| !!! | CAAATTGTTATTTTCGTGGT+CGG | - | chr1.3:15788457-15788476 | MS.gene93177:CDS | 30.0% |
| !!! | CTACTATCACTTTTTGAAAG+GGG | - | chr1.3:15787574-15787593 | MS.gene93177:intron | 30.0% |
| !!! | GATAAAGAACTGCTTTTTTG+TGG | + | chr1.3:15792835-15792854 | None:intergenic | 30.0% |
| !!! | GTTCTTTATCGCAGTTTTTT+TGG | - | chr1.3:15792845-15792864 | MS.gene93177:CDS | 30.0% |
| !!! | TCAAGAGTTATTTTTACCCT+TGG | - | chr1.3:15789389-15789408 | MS.gene93177:CDS | 30.0% |
| !!! | TCATATGTGCTTTTTTCACT+TGG | - | chr1.3:15792718-15792737 | MS.gene93177:intron | 30.0% |
| !!! | TTTTTGGTGATGCTTCTATT+AGG | - | chr1.3:15792861-15792880 | MS.gene93177:CDS | 30.0% |
| AAAAGACTATGCTCCTAAGT+TGG | - | chr1.3:15791271-15791290 | MS.gene93177:intron | 35.0% | |
| AAACCTCCAAAAAAGAAGAC+AGG | + | chr1.3:15791561-15791580 | None:intergenic | 35.0% | |
| AAAGACGTGCACTACTAAAA+GGG | + | chr1.3:15788725-15788744 | None:intergenic | 35.0% | |
| AACCTCCAAAAAAGAAGACA+GGG | + | chr1.3:15791560-15791579 | None:intergenic | 35.0% | |
| AATATGTTCGACAATGAAGC+GGG | - | chr1.3:15786940-15786959 | MS.gene93177:CDS | 35.0% | |
| AATCAGTAGAAGCAAATGCA+AGG | + | chr1.3:15792486-15792505 | None:intergenic | 35.0% | |
| AATCTTCTACTTATAGGTGG+TGG | - | chr1.3:15787600-15787619 | MS.gene93177:intron | 35.0% | |
| ACCAATCTTCTACTTATAGG+TGG | - | chr1.3:15787597-15787616 | MS.gene93177:intron | 35.0% | |
| ACCACCTATAAGTAGAAGAT+TGG | + | chr1.3:15787601-15787620 | None:intergenic | 35.0% | |
| ACCATAAAAGAAAACCAGAG+GGG | + | chr1.3:15790583-15790602 | None:intergenic | 35.0% | |
| AGATAATAACCGAACCTCAT+AGG | + | chr1.3:15787136-15787155 | None:intergenic | 35.0% | |
| AGCATCCGTTGAAGAAAAAA+AGG | + | chr1.3:15792543-15792562 | None:intergenic | 35.0% | |
| AGGAGAACTAGTGCAATAAA+TGG | + | chr1.3:15790688-15790707 | None:intergenic | 35.0% | |
| ATATGCTATTAAGTGTGTGG+TGG | - | chr1.3:15789163-15789182 | MS.gene93177:intron | 35.0% | |
| ATCACTTGATCCAGTAATTG+GGG | - | chr1.3:15790362-15790381 | MS.gene93177:intron | 35.0% | |
| ATCAGTAGAAGCAAATGCAA+GGG | + | chr1.3:15792485-15792504 | None:intergenic | 35.0% | |
| ATGATAGCAAGTACTCTATG+TGG | + | chr1.3:15791112-15791131 | None:intergenic | 35.0% | |
| ATGATTGGATGCTTATGAGT+GGG | + | chr1.3:15789005-15789024 | None:intergenic | 35.0% | |
| ATTCAGATACCTAGTAGTTG+TGG | + | chr1.3:15788099-15788118 | None:intergenic | 35.0% | |
| ATTCCAAATGTGTGAAAGTG+GGG | - | chr1.3:15788070-15788089 | MS.gene93177:intron | 35.0% | |
| CTCATCTATAAGAGTTGTTG+AGG | - | chr1.3:15790482-15790501 | MS.gene93177:intron | 35.0% | |
| CTGTATTACTGCAACAAAAG+TGG | - | chr1.3:15790523-15790542 | MS.gene93177:intron | 35.0% | |
| GAAAAACACGAAGTTATGAC+TGG | - | chr1.3:15787004-15787023 | MS.gene93177:CDS | 35.0% | |
| GAAATAGTATCTGAACCACT+TGG | - | chr1.3:15789984-15790003 | MS.gene93177:intron | 35.0% | |
| GAATATGTTCGACAATGAAG+CGG | - | chr1.3:15786939-15786958 | MS.gene93177:CDS | 35.0% | |
| GATACTATTTCAGCTGAAGA+AGG | + | chr1.3:15789975-15789994 | None:intergenic | 35.0% | |
| GATTCATATTCCTTCCTGTT+GGG | - | chr1.3:15787903-15787922 | MS.gene93177:intron | 35.0% | |
| GGTATATGCTATTAAGTGTG+TGG | - | chr1.3:15789160-15789179 | MS.gene93177:intron | 35.0% | |
| GTGTACATGTATGATGTATC+TGG | + | chr1.3:15791070-15791089 | None:intergenic | 35.0% | |
| TATCACATGTACTCAGATGA+AGG | - | chr1.3:15787215-15787234 | MS.gene93177:intron | 35.0% | |
| TATGATTGGATGCTTATGAG+TGG | + | chr1.3:15789006-15789025 | None:intergenic | 35.0% | |
| TCATCTGGAAAGGAAAATGT+AGG | + | chr1.3:15789190-15789209 | None:intergenic | 35.0% | |
| TGATTTCCTGACTATTGCTT+AGG | - | chr1.3:15789672-15789691 | MS.gene93177:intron | 35.0% | |
| TGCTATCATTCTAGATACCT+TGG | - | chr1.3:15791123-15791142 | MS.gene93177:intron | 35.0% | |
| TTAATTCGTACCGTGATGAT+GGG | + | chr1.3:15791737-15791756 | None:intergenic | 35.0% | |
| TTCTACTGTTGGGATATGAT+TGG | + | chr1.3:15789020-15789039 | None:intergenic | 35.0% | |
| TTGGATGATGACAAAGTTTC+TGG | - | chr1.3:15791488-15791507 | MS.gene93177:intron | 35.0% | |
| TTTGTTTCCTTTCTCGAAAC+AGG | - | chr1.3:15792004-15792023 | MS.gene93177:intron | 35.0% | |
| ! | ACATTCACTCAGATTTTCCT+AGG | + | chr1.3:15787460-15787479 | None:intergenic | 35.0% |
| ! | ACTATTGCTTAGGTTGTTGA+AGG | - | chr1.3:15789682-15789701 | MS.gene93177:intron | 35.0% |
| ! | ATCTTTGTATTGGTGTATGG+TGG | + | chr1.3:15792890-15792909 | None:intergenic | 35.0% |
| ! | ATTCATACTTTGCCTTTTGG+AGG | - | chr1.3:15792752-15792771 | MS.gene93177:intron | 35.0% |
| ! | CTATTGCTTAGGTTGTTGAA+GGG | - | chr1.3:15789683-15789702 | MS.gene93177:intron | 35.0% |
| ! | CTCATCTTTGTATTGGTGTA+TGG | + | chr1.3:15792893-15792912 | None:intergenic | 35.0% |
| ! | GCAATTCATACTTTGCCTTT+TGG | - | chr1.3:15792749-15792768 | MS.gene93177:intron | 35.0% |
| ! | GCTATAATTCGTGCCTTATT+TGG | - | chr1.3:15792947-15792966 | MS.gene93177:CDS | 35.0% |
| ! | TATGGGTCCAGATTTTATTG+GGG | - | chr1.3:15787353-15787372 | MS.gene93177:intron | 35.0% |
| ! | TCACACATTTGGAATATCAG+TGG | + | chr1.3:15788065-15788084 | None:intergenic | 35.0% |
| ! | TGGGACAAAATTTTCTACAC+AGG | - | chr1.3:15790543-15790562 | MS.gene93177:intron | 35.0% |
| ! | TGTTGTTATTGTTGTGTGAC+TGG | - | chr1.3:15789592-15789611 | MS.gene93177:intron | 35.0% |
| ! | TTTTATAGTAGTGCACGTGA+GGG | - | chr1.3:15788530-15788549 | MS.gene93177:intron | 35.0% |
| !! | AATTCGTGCCTTATTTGGAA+GGG | - | chr1.3:15792952-15792971 | MS.gene93177:CDS | 35.0% |
| !! | AATTGATGAGAGTGCTTGAT+TGG | - | chr1.3:15787391-15787410 | MS.gene93177:intron | 35.0% |
| !! | ATTGATGAGAGTGCTTGATT+GGG | - | chr1.3:15787392-15787411 | MS.gene93177:intron | 35.0% |
| !! | CACCAAATCAGCTTTTAAGT+TGG | - | chr1.3:15792276-15792295 | MS.gene93177:intron | 35.0% |
| !! | CTAGAAGTAGCTTTAAAACC+AGG | + | chr1.3:15792314-15792333 | None:intergenic | 35.0% |
| !! | GTTTCTGGTAAGATTGTTCA+TGG | - | chr1.3:15791503-15791522 | MS.gene93177:intron | 35.0% |
| !! | TAATTCGTGCCTTATTTGGA+AGG | - | chr1.3:15792951-15792970 | MS.gene93177:CDS | 35.0% |
| !! | TTTGTTAAGACTGTTTCTGC+TGG | - | chr1.3:15792122-15792141 | MS.gene93177:intron | 35.0% |
| !!! | AGTGGCCTTTTTTTCTTCAA+CGG | - | chr1.3:15792535-15792554 | MS.gene93177:intron | 35.0% |
| !!! | AGTGTGGGTTTTTTATGGTT+TGG | - | chr1.3:15787535-15787554 | MS.gene93177:intron | 35.0% |
| !!! | AGTTATTTTTACCCTTGGAC+AGG | - | chr1.3:15789394-15789413 | MS.gene93177:CDS | 35.0% |
| !!! | GATGTTTTGACCTGCATTAA+AGG | + | chr1.3:15789939-15789958 | None:intergenic | 35.0% |
| !!! | TGTTTTGACCTGCATTAAAG+GGG | + | chr1.3:15789937-15789956 | None:intergenic | 35.0% |
| !!! | TTTTTTAGGCAATGGAAGAG+TGG | - | chr1.3:15790836-15790855 | MS.gene93177:intron | 35.0% |
| AACAACCAATTCACACTTGC+TGG | + | chr1.3:15789348-15789367 | None:intergenic | 40.0% | |
| AACAGCCTCTTGTGTAAAAC+AGG | - | chr1.3:15788619-15788638 | MS.gene93177:CDS | 40.0% | |
| ACACAATGTTGGATCGTCAA+TGG | + | chr1.3:15788262-15788281 | None:intergenic | 40.0% | |
| ACAGCCTCTTGTGTAAAACA+GGG | - | chr1.3:15788620-15788639 | MS.gene93177:CDS | 40.0% | |
| ACTGGATCAAGTGATAACAC+TGG | + | chr1.3:15790357-15790376 | None:intergenic | 40.0% | |
| AGATTGATGAAGGCTCTCAT+GGG | - | chr1.3:15792911-15792930 | MS.gene93177:CDS | 40.0% | |
| AGCATCTTAAGTGTCTCAAG+TGG | + | chr1.3:15788217-15788236 | None:intergenic | 40.0% | |
| AGCTTGGAGGGAAGAAAAAA+GGG | + | chr1.3:15790083-15790102 | None:intergenic | 40.0% | |
| AGTCAATTCATTCAGACGGT+TGG | - | chr1.3:15787880-15787899 | MS.gene93177:intron | 40.0% | |
| AGTCTGAGTTGTGTAGTTAG+TGG | - | chr1.3:15789623-15789642 | MS.gene93177:intron | 40.0% | |
| ATACTCCAGCAAGTGTGAAT+TGG | - | chr1.3:15789340-15789359 | MS.gene93177:CDS | 40.0% | |
| ATATATGCAGCAAGAGGCTT+CGG | + | chr1.3:15792071-15792090 | None:intergenic | 40.0% | |
| ATCAAAGATCTCCTAACCAG+TGG | + | chr1.3:15789285-15789304 | None:intergenic | 40.0% | |
| ATGATCAACACAACTCCAAG+TGG | + | chr1.3:15790002-15790021 | None:intergenic | 40.0% | |
| ATTCCCCACTTTCACACATT+TGG | + | chr1.3:15788076-15788095 | None:intergenic | 40.0% | |
| CAACAACCTAAGCAATAGTC+AGG | + | chr1.3:15789681-15789700 | None:intergenic | 40.0% | |
| CACTCAAGGAATTGAAGCAT+TGG | - | chr1.3:15789810-15789829 | MS.gene93177:intron | 40.0% | |
| CACTTAAGATGCTAGGTCTT+AGG | - | chr1.3:15788224-15788243 | MS.gene93177:intron | 40.0% | |
| CACTTTAGATGTTCGGTCAT+AGG | - | chr1.3:15788304-15788323 | MS.gene93177:intron | 40.0% | |
| CATCATCACGGTACGAATTA+AGG | - | chr1.3:15791736-15791755 | MS.gene93177:intron | 40.0% | |
| CATGAATTCCCCTTTAATGC+AGG | - | chr1.3:15789926-15789945 | MS.gene93177:CDS | 40.0% | |
| CGTACAATACACCAAATGGT+GGG | - | chr1.3:15788651-15788670 | MS.gene93177:CDS | 40.0% | |
| CTCATGTAAAACTGCACTCA+AGG | - | chr1.3:15789796-15789815 | MS.gene93177:intron | 40.0% | |
| CTCATTATCAGAGAATCACG+CGG | + | chr1.3:15791689-15791708 | None:intergenic | 40.0% | |
| CTCTTGTGTAAAACAGGGTA+AGG | - | chr1.3:15788625-15788644 | MS.gene93177:CDS | 40.0% | |
| CTTAATTCGTACCGTGATGA+TGG | + | chr1.3:15791738-15791757 | None:intergenic | 40.0% | |
| CTTGAGACACTTAAGATGCT+AGG | - | chr1.3:15788217-15788236 | MS.gene93177:CDS | 40.0% | |
| GAAAGACGTGCACTACTAAA+AGG | + | chr1.3:15788726-15788745 | None:intergenic | 40.0% | |
| GACATAGTATCTGAACCACT+TGG | - | chr1.3:15789889-15789908 | MS.gene93177:CDS | 40.0% | |
| GATTGTTCATGGAGGTGAAA+AGG | - | chr1.3:15791514-15791533 | MS.gene93177:intron | 40.0% | |
| GCATTTATGCATGTGGAATG+TGG | - | chr1.3:15787933-15787952 | MS.gene93177:intron | 40.0% | |
| GGACATCCAATAGAACAGTA+GGG | + | chr1.3:15791667-15791686 | None:intergenic | 40.0% | |
| GGATTCATATTCCTTCCTGT+TGG | - | chr1.3:15787902-15787921 | MS.gene93177:intron | 40.0% | |
| GGGACCAATCTTCTACTTAT+AGG | - | chr1.3:15787594-15787613 | MS.gene93177:intron | 40.0% | |
| GGTGTAATTGCATTGCAGAT+TGG | - | chr1.3:15789761-15789780 | MS.gene93177:intron | 40.0% | |
| GTCAATTCATTCAGACGGTT+GGG | - | chr1.3:15787881-15787900 | MS.gene93177:intron | 40.0% | |
| GTGCTTCTAATCATCTGGAA+AGG | + | chr1.3:15789200-15789219 | None:intergenic | 40.0% | |
| GTTCTGTTCTGTTGAATCCT+AGG | - | chr1.3:15787440-15787459 | MS.gene93177:intron | 40.0% | |
| GTTGTTGTCATGTGACTGAA+AGG | - | chr1.3:15788576-15788595 | MS.gene93177:intron | 40.0% | |
| TACAAACGACAAGAAGCTCA+AGG | - | chr1.3:15792094-15792113 | MS.gene93177:intron | 40.0% | |
| TAGAGAATCCACCTAGGAAT+AGG | + | chr1.3:15791369-15791388 | None:intergenic | 40.0% | |
| TAGCTTGGAGGGAAGAAAAA+AGG | + | chr1.3:15790084-15790103 | None:intergenic | 40.0% | |
| TCATTATCAGAGAATCACGC+GGG | + | chr1.3:15791688-15791707 | None:intergenic | 40.0% | |
| TCCATTACTTCCCATCATCA+CGG | - | chr1.3:15791724-15791743 | MS.gene93177:intron | 40.0% | |
| TCTGGTAAGATTGTTCATGG+AGG | - | chr1.3:15791506-15791525 | MS.gene93177:intron | 40.0% | |
| TGCAAAAAATCCCAACAGGA+AGG | + | chr1.3:15787916-15787935 | None:intergenic | 40.0% | |
| TGCACGGAATAGACTCTATT+TGG | + | chr1.3:15788902-15788921 | None:intergenic | 40.0% | |
| TGCTTGTGCTTCTAATCATC+TGG | + | chr1.3:15789205-15789224 | None:intergenic | 40.0% | |
| TGTTATTGTTGTGTGACTGG+AGG | - | chr1.3:15789595-15789614 | MS.gene93177:intron | 40.0% | |
| TTAAGTCTTAGTGAGGTCCA+AGG | + | chr1.3:15791143-15791162 | None:intergenic | 40.0% | |
| TTATCGACCTGTTTCGAGAA+AGG | + | chr1.3:15792014-15792033 | None:intergenic | 40.0% | |
| TTTATAGTAGTGCACGTGAG+GGG | - | chr1.3:15788531-15788550 | MS.gene93177:intron | 40.0% | |
| ! | AAGACGACTTCAAGTTTGCT+TGG | - | chr1.3:15790757-15790776 | MS.gene93177:intron | 40.0% |
| ! | AGTCTTTAGAGAATCCACCT+AGG | + | chr1.3:15791375-15791394 | None:intergenic | 40.0% |
| ! | ATGGGTCCAGATTTTATTGG+GGG | - | chr1.3:15787354-15787373 | MS.gene93177:intron | 40.0% |
| ! | ATTGACATCACTAGCTTGGA+GGG | + | chr1.3:15790095-15790114 | None:intergenic | 40.0% |
| ! | CAAAGCTCTAATACCAGTTG+AGG | + | chr1.3:15790708-15790727 | None:intergenic | 40.0% |
| ! | CACTGAAAACGTACCTTTTC+CGG | + | chr1.3:15789842-15789861 | None:intergenic | 40.0% |
| ! | CGATCGCTTGATAAAGCTTT+TGG | - | chr1.3:15791469-15791488 | MS.gene93177:intron | 40.0% |
| ! | CTGAGACAAACATTTGGTTC+TGG | - | chr1.3:15786982-15787001 | MS.gene93177:CDS | 40.0% |
| ! | CTTACCCTGTTTTACACAAG+AGG | + | chr1.3:15788627-15788646 | None:intergenic | 40.0% |
| ! | CTTTGATCACAGAGTGTTCA+GGG | - | chr1.3:15790723-15790742 | MS.gene93177:intron | 40.0% |
| ! | GATTAGCCCTACTGTTCTAT+TGG | - | chr1.3:15791658-15791677 | MS.gene93177:intron | 40.0% |
| ! | GTACGTGTATCTTGTCACTT+TGG | - | chr1.3:15791043-15791062 | MS.gene93177:intron | 40.0% |
| ! | GTTTTATAGTAGTGCACGTG+AGG | - | chr1.3:15788529-15788548 | MS.gene93177:intron | 40.0% |
| ! | TTGTGTTGATCATCTCTGCA+TGG | - | chr1.3:15790009-15790028 | MS.gene93177:intron | 40.0% |
| !! | CAAGGAATTGAAGCATTGGA+TGG | - | chr1.3:15789814-15789833 | MS.gene93177:intron | 40.0% |
| !!! | AAGCTCCCTGTCTTCTTTTT+TGG | - | chr1.3:15791552-15791571 | MS.gene93177:intron | 40.0% |
| !!! | GTTGCAGTGTGGGTTTTTTA+TGG | - | chr1.3:15787530-15787549 | MS.gene93177:intron | 40.0% |
| !!! | TAGTGCGTCATAGTTTTGAC+TGG | - | chr1.3:15792677-15792696 | MS.gene93177:intron | 40.0% |
| !!! | TCCCCTCTGGTTTTCTTTTA+TGG | - | chr1.3:15790579-15790598 | MS.gene93177:intron | 40.0% |
| AAACTGTCGCCTATGAGGTT+CGG | - | chr1.3:15787124-15787143 | MS.gene93177:CDS | 45.0% | |
| AAGAGTGGCACGCATTGTTA+TGG | - | chr1.3:15790851-15790870 | MS.gene93177:intron | 45.0% | |
| AATTGAATGCACAGGACCAC+TGG | + | chr1.3:15789317-15789336 | None:intergenic | 45.0% | |
| ACCGTTCAATCTTGACCAAG+TGG | - | chr1.3:15788039-15788058 | MS.gene93177:intron | 45.0% | |
| AGAATCCACCTAGGAATAGG+AGG | + | chr1.3:15791366-15791385 | None:intergenic | 45.0% | |
| AGATGAGAATGAGATGCCAC+TGG | - | chr1.3:15789266-15789285 | MS.gene93177:intron | 45.0% | |
| AGTGTTAAGGTCCTGTCCAA+GGG | + | chr1.3:15789408-15789427 | None:intergenic | 45.0% | |
| ATAGGCGACAGTTTCAAGAG+GGG | + | chr1.3:15787118-15787137 | None:intergenic | 45.0% | |
| ATTGCAAGGTGGCAACTAGA+AGG | - | chr1.3:15791180-15791199 | MS.gene93177:intron | 45.0% | |
| ATTGGATGCTTATGAGTGGG+TGG | + | chr1.3:15789002-15789021 | None:intergenic | 45.0% | |
| CAACTTTACCAATTGCGCCA+AGG | + | chr1.3:15788560-15788579 | None:intergenic | 45.0% | |
| CAGTTATAGCAGCTCTATCG+CGG | + | chr1.3:15790260-15790279 | None:intergenic | 45.0% | |
| CATAGGCGACAGTTTCAAGA+GGG | + | chr1.3:15787119-15787138 | None:intergenic | 45.0% | |
| GAGATTGATGAAGGCTCTCA+TGG | - | chr1.3:15792910-15792929 | MS.gene93177:CDS | 45.0% | |
| GATTGATGCAACTGTCGTGT+TGG | + | chr1.3:15792616-15792635 | None:intergenic | 45.0% | |
| GCAACTAGAAGGATAATCGC+TGG | - | chr1.3:15791191-15791210 | MS.gene93177:intron | 45.0% | |
| GCCACTTGGTCAAGATTGAA+CGG | + | chr1.3:15788043-15788062 | None:intergenic | 45.0% | |
| GCGTACAATACACCAAATGG+TGG | - | chr1.3:15788650-15788669 | MS.gene93177:CDS | 45.0% | |
| GCTGCGTACAATACACCAAA+TGG | - | chr1.3:15788647-15788666 | MS.gene93177:CDS | 45.0% | |
| GCTTTATCAAGCGATCGAAG+TGG | + | chr1.3:15791466-15791485 | None:intergenic | 45.0% | |
| GGGACATCCAATAGAACAGT+AGG | + | chr1.3:15791668-15791687 | None:intergenic | 45.0% | |
| GTCATGTGACTGAAAGGTCA+CGG | - | chr1.3:15788582-15788601 | MS.gene93177:intron | 45.0% | |
| GTGATCAACACAACTCCAAG+TGG | + | chr1.3:15789907-15789926 | None:intergenic | 45.0% | |
| GTGGCTGGAGAAATTTCTGA+TGG | + | chr1.3:15790420-15790439 | None:intergenic | 45.0% | |
| TCATAGGCGACAGTTTCAAG+AGG | + | chr1.3:15787120-15787139 | None:intergenic | 45.0% | |
| TCATGTGACTGAAAGGTCAC+GGG | - | chr1.3:15788583-15788602 | MS.gene93177:intron | 45.0% | |
| TCGTTGCTGGCAAAACTGTT+AGG | - | chr1.3:15790444-15790463 | MS.gene93177:intron | 45.0% | |
| TCTCAGTTCATTCACCAGCA+TGG | + | chr1.3:15786968-15786987 | None:intergenic | 45.0% | |
| TCTTGAAACTGTCGCCTATG+AGG | - | chr1.3:15787119-15787138 | MS.gene93177:CDS | 45.0% | |
| TGCGATTGACATCACTAGCT+TGG | + | chr1.3:15790099-15790118 | None:intergenic | 45.0% | |
| TGCTAGGTCTTAGGTGTTAG+AGG | - | chr1.3:15788233-15788252 | MS.gene93177:intron | 45.0% | |
| TTGGAATATCAGTGGCCACT+TGG | + | chr1.3:15788057-15788076 | None:intergenic | 45.0% | |
| ! | AGAATGAGATGCCACTGGTT+AGG | - | chr1.3:15789271-15789290 | MS.gene93177:intron | 45.0% |
| ! | AGTTGGTTCTCAGCAATTCC+TGG | - | chr1.3:15792293-15792312 | MS.gene93177:intron | 45.0% |
| ! | GATTGACATCACTAGCTTGG+AGG | + | chr1.3:15790096-15790115 | None:intergenic | 45.0% |
| ! | GCTTAGGTTGTTGAAGGGTT+TGG | - | chr1.3:15789688-15789707 | MS.gene93177:intron | 45.0% |
| ! | GCTTTGATCACAGAGTGTTC+AGG | - | chr1.3:15790722-15790741 | MS.gene93177:intron | 45.0% |
| ! | GTTTGGTTCCTCCTATTCCT+AGG | - | chr1.3:15791355-15791374 | MS.gene93177:intron | 45.0% |
| ! | TATTGCAGCTGGTAATGCTG+TGG | - | chr1.3:15790386-15790405 | MS.gene93177:intron | 45.0% |
| ! | TTACACAAGAGGCTGTTTCC+AGG | + | chr1.3:15788616-15788635 | None:intergenic | 45.0% |
| ! | TTCTCTTTGTTTCTCCCCTC+TGG | - | chr1.3:15790566-15790585 | MS.gene93177:intron | 45.0% |
| ! | TTGCACTAGTTCTCCTCAAC+TGG | - | chr1.3:15790692-15790711 | MS.gene93177:intron | 45.0% |
| ! | TTTCTGGTGCGTGTACTGTT+CGG | - | chr1.3:15787497-15787516 | MS.gene93177:intron | 45.0% |
| ! | TTTTGCCAGCAACGATGATG+TGG | + | chr1.3:15790439-15790458 | None:intergenic | 45.0% |
| !! | ACCGTGATGATGGGAAGTAA+TGG | + | chr1.3:15791728-15791747 | None:intergenic | 45.0% |
| !! | ACTTTGCCTTTTGGAGGAGT+AGG | - | chr1.3:15792758-15792777 | MS.gene93177:CDS | 45.0% |
| !! | ATTGAAGCATTGGATGGCTC+CGG | - | chr1.3:15789820-15789839 | MS.gene93177:intron | 45.0% |
| !! | CTTTGATGATGTGCAACCAG+TGG | - | chr1.3:15789298-15789317 | MS.gene93177:intron | 45.0% |
| !! | GTTAAGACTGTTTCTGCTGG+TGG | - | chr1.3:15792125-15792144 | MS.gene93177:intron | 45.0% |
| !!! | CTCCCTGTCTTCTTTTTTGG+AGG | - | chr1.3:15791555-15791574 | MS.gene93177:intron | 45.0% |
| !!! | TTTATTTTTTTTAATTTTTC+TGG | - | chr1.3:15787481-15787500 | MS.gene93177:intron | 5.0% |
| AACAGTAGGGCTAATCCTCC+TGG | + | chr1.3:15791654-15791673 | None:intergenic | 50.0% | |
| ACCAGAGGCCATTAAGTACG+AGG | + | chr1.3:15789112-15789131 | None:intergenic | 50.0% | |
| CCAGAGGCCATTAAGTACGA+GGG | + | chr1.3:15789111-15789130 | None:intergenic | 50.0% | |
| CTCTCACCTACTCCTCCAAA+AGG | + | chr1.3:15792767-15792786 | None:intergenic | 50.0% | |
| GAGTGTTAAGGTCCTGTCCA+AGG | + | chr1.3:15789409-15789428 | None:intergenic | 50.0% | |
| GCACTACTAAAAGGGCAACC+CGG | + | chr1.3:15788717-15788736 | None:intergenic | 50.0% | |
| GCAGTGACCCTCGTACTTAA+TGG | - | chr1.3:15789101-15789120 | MS.gene93177:intron | 50.0% | |
| GCTGCAATAGCCCCAATTAC+TGG | + | chr1.3:15790375-15790394 | None:intergenic | 50.0% | |
| GTAATTGGGGCTATTGCAGC+TGG | - | chr1.3:15790375-15790394 | MS.gene93177:intron | 50.0% | |
| GTGGGGAATCCACAACTACT+AGG | - | chr1.3:15788087-15788106 | MS.gene93177:intron | 50.0% | |
| TAGGCGACAGTTTCAAGAGG+GGG | + | chr1.3:15787117-15787136 | None:intergenic | 50.0% | |
| TGGTGGAAACGTTGCAGTGT+GGG | - | chr1.3:15787520-15787539 | MS.gene93177:intron | 50.0% | |
| TGGTTCCTCCTATTCCTAGG+TGG | - | chr1.3:15791358-15791377 | MS.gene93177:intron | 50.0% | |
| TGTTCGGTCATAGGTCTGAG+AGG | - | chr1.3:15788313-15788332 | MS.gene93177:intron | 50.0% | |
| TTGATGAAGGCTCTCATGGG+TGG | - | chr1.3:15792914-15792933 | MS.gene93177:CDS | 50.0% | |
| TTTGGAGGAGTAGGTGAGAG+TGG | - | chr1.3:15792767-15792786 | MS.gene93177:CDS | 50.0% | |
| !! | GACTGTTTCTGCTGGTGGTT+TGG | - | chr1.3:15792130-15792149 | MS.gene93177:intron | 50.0% |
| AAGGTCACGGGTTCAAGTCC+TGG | - | chr1.3:15788595-15788614 | MS.gene93177:intron | 55.0% | |
| ACACCAGTTGTGCTGGAGCT+TGG | - | chr1.3:15790894-15790913 | MS.gene93177:intron | 55.0% | |
| ACTAGAGCTCCCGCATATGC+AGG | + | chr1.3:15788691-15788710 | None:intergenic | 55.0% | |
| AGGAGTAGGTGAGAGTGGAG+TGG | - | chr1.3:15792772-15792791 | MS.gene93177:CDS | 55.0% | |
| AGGGGTAACCTTGGCGCAAT+TGG | - | chr1.3:15788549-15788568 | MS.gene93177:intron | 55.0% | |
| AGTGGAGTGGGTGCATACCA+TGG | - | chr1.3:15792785-15792804 | MS.gene93177:CDS | 55.0% | |
| ATGAAGGCTCTCATGGGTGG+TGG | - | chr1.3:15792917-15792936 | MS.gene93177:CDS | 55.0% | |
| CAATGAAGCGGGATCCATGC+TGG | - | chr1.3:15786951-15786970 | MS.gene93177:CDS | 55.0% | |
| CCCTCGTACTTAATGGCCTC+TGG | - | chr1.3:15789108-15789127 | MS.gene93177:intron | 55.0% | |
| CTAGAGCTCCCGCATATGCA+GGG | + | chr1.3:15788690-15788709 | None:intergenic | 55.0% | |
| GCACCTTACACCAGTTGTGC+TGG | - | chr1.3:15790887-15790906 | MS.gene93177:intron | 55.0% | |
| GCATTGGATGGCTCCGGAAA+AGG | - | chr1.3:15789826-15789845 | MS.gene93177:intron | 55.0% | |
| GCTCCAGCACAACTGGTGTA+AGG | + | chr1.3:15790893-15790912 | None:intergenic | 55.0% | |
| GGAGTAGGTGAGAGTGGAGT+GGG | - | chr1.3:15792773-15792792 | MS.gene93177:CDS | 55.0% | |
| TCCAGCCACATCATCGTTGC+TGG | - | chr1.3:15790431-15790450 | MS.gene93177:intron | 55.0% | |
| ! | GTGGTGGAAACGTTGCAGTG+TGG | - | chr1.3:15787519-15787538 | MS.gene93177:intron | 55.0% |
| AGCGGCTATAGCAGCGCTCT+AGG | + | chr1.3:15790170-15790189 | None:intergenic | 60.0% | |
| CATATGCAGGGTCCGGGAAG+GGG | + | chr1.3:15788678-15788697 | None:intergenic | 60.0% | |
| CCAGTTGTGCTGGAGCTTGG+AGG | - | chr1.3:15790897-15790916 | MS.gene93177:intron | 60.0% | |
| CCTCCAAGCTCCAGCACAAC+TGG | + | chr1.3:15790900-15790919 | None:intergenic | 60.0% | |
| CTGGTGCGTGTACTGTTCGG+TGG | - | chr1.3:15787500-15787519 | MS.gene93177:intron | 60.0% | |
| CTTCCCGGACCCTGCATATG+CGG | - | chr1.3:15788678-15788697 | MS.gene93177:CDS | 60.0% | |
| GCATATGCAGGGTCCGGGAA+GGG | + | chr1.3:15788679-15788698 | None:intergenic | 60.0% | |
| GCCAGCAACGATGATGTGGC+TGG | + | chr1.3:15790435-15790454 | None:intergenic | 60.0% | |
| GTGCACGTGAGGGGTAACCT+TGG | - | chr1.3:15788540-15788559 | MS.gene93177:intron | 60.0% | |
| TTCCCGGACCCTGCATATGC+GGG | - | chr1.3:15788679-15788698 | MS.gene93177:CDS | 60.0% | |
| ! | CAAATGGTGGGACCCCTTCC+CGG | - | chr1.3:15788663-15788682 | MS.gene93177:CDS | 60.0% |
| ! | GTGCGTGTACTGTTCGGTGG+TGG | - | chr1.3:15787503-15787522 | MS.gene93177:intron | 60.0% |
| CGCATATGCAGGGTCCGGGA+AGG | + | chr1.3:15788680-15788699 | None:intergenic | 65.0% | |
| CGGGAAGGGGTCCCACCATT+TGG | + | chr1.3:15788665-15788684 | None:intergenic | 65.0% | |
| CTCCCGCATATGCAGGGTCC+GGG | + | chr1.3:15788684-15788703 | None:intergenic | 65.0% | |
| GCTCCCGCATATGCAGGGTC+CGG | + | chr1.3:15788685-15788704 | None:intergenic | 65.0% | |
| ! | ATGCGGGAGCTCTAGTGCGC+CGG | - | chr1.3:15788695-15788714 | MS.gene93177:intron | 65.0% |
| ! | TGCGGGAGCTCTAGTGCGCC+GGG | - | chr1.3:15788696-15788715 | MS.gene93177:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 15786916 | 15792979 | 15786916 | ID=MS.gene93177 |
| chr1.3 | mRNA | 15786916 | 15792979 | 15786916 | ID=MS.gene93177.t1;Parent=MS.gene93177 |
| chr1.3 | exon | 15792755 | 15792979 | 15792755 | ID=MS.gene93177.t1.exon1;Parent=MS.gene93177.t1 |
| chr1.3 | CDS | 15792755 | 15792979 | 15792755 | ID=cds.MS.gene93177.t1;Parent=MS.gene93177.t1 |
| chr1.3 | exon | 15790048 | 15790116 | 15790048 | ID=MS.gene93177.t1.exon2;Parent=MS.gene93177.t1 |
| chr1.3 | CDS | 15790048 | 15790116 | 15790048 | ID=cds.MS.gene93177.t1;Parent=MS.gene93177.t1 |
| chr1.3 | exon | 15789851 | 15789947 | 15789851 | ID=MS.gene93177.t1.exon3;Parent=MS.gene93177.t1 |
| chr1.3 | CDS | 15789851 | 15789947 | 15789851 | ID=cds.MS.gene93177.t1;Parent=MS.gene93177.t1 |
| chr1.3 | exon | 15789331 | 15789537 | 15789331 | ID=MS.gene93177.t1.exon4;Parent=MS.gene93177.t1 |
| chr1.3 | CDS | 15789331 | 15789537 | 15789331 | ID=cds.MS.gene93177.t1;Parent=MS.gene93177.t1 |
| chr1.3 | exon | 15788936 | 15789051 | 15788936 | ID=MS.gene93177.t1.exon5;Parent=MS.gene93177.t1 |
| chr1.3 | CDS | 15788936 | 15789051 | 15788936 | ID=cds.MS.gene93177.t1;Parent=MS.gene93177.t1 |
| chr1.3 | exon | 15788603 | 15788707 | 15788603 | ID=MS.gene93177.t1.exon6;Parent=MS.gene93177.t1 |
| chr1.3 | CDS | 15788603 | 15788707 | 15788603 | ID=cds.MS.gene93177.t1;Parent=MS.gene93177.t1 |
| chr1.3 | exon | 15788346 | 15788518 | 15788346 | ID=MS.gene93177.t1.exon7;Parent=MS.gene93177.t1 |
| chr1.3 | CDS | 15788346 | 15788518 | 15788346 | ID=cds.MS.gene93177.t1;Parent=MS.gene93177.t1 |
| chr1.3 | exon | 15788150 | 15788240 | 15788150 | ID=MS.gene93177.t1.exon8;Parent=MS.gene93177.t1 |
| chr1.3 | CDS | 15788150 | 15788240 | 15788150 | ID=cds.MS.gene93177.t1;Parent=MS.gene93177.t1 |
| chr1.3 | exon | 15787720 | 15787869 | 15787720 | ID=MS.gene93177.t1.exon9;Parent=MS.gene93177.t1 |
| chr1.3 | CDS | 15787720 | 15787869 | 15787720 | ID=cds.MS.gene93177.t1;Parent=MS.gene93177.t1 |
| chr1.3 | exon | 15786916 | 15787149 | 15786916 | ID=MS.gene93177.t1.exon10;Parent=MS.gene93177.t1 |
| chr1.3 | CDS | 15786916 | 15787149 | 15786916 | ID=cds.MS.gene93177.t1;Parent=MS.gene93177.t1 |
| Gene Sequence |
| Protein sequence |
