Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93911.t1 | XP_013455262.1 | 98.2 | 775 | 14 | 0 | 1 | 775 | 270 | 1044 | 0.00E+00 | 1541.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93911.t1 | Q60EW9 | 64.8 | 778 | 262 | 7 | 2 | 775 | 5 | 774 | 2.2e-302 | 1039.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93911.t1 | A0A072UJM2 | 98.2 | 775 | 14 | 0 | 1 | 775 | 270 | 1044 | 0.0e+00 | 1541.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050553 | MS.gene93911 | 0.804212 | 2.41E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene93911 | MS.gene68918 | PPI |
| MS.gene015570 | MS.gene93911 | PPI |
| MS.gene93911 | MS.gene070339 | PPI |
| MS.gene072801 | MS.gene93911 | PPI |
| MS.gene048777 | MS.gene93911 | PPI |
| MS.gene93911 | MS.gene048780 | PPI |
| MS.gene99080 | MS.gene93911 | PPI |
| MS.gene93911 | MS.gene030426 | PPI |
| MS.gene93911 | MS.gene72170 | PPI |
| MS.gene066619 | MS.gene93911 | PPI |
| MS.gene93911 | MS.gene50295 | PPI |
| MS.gene050376 | MS.gene93911 | PPI |
| MS.gene019289 | MS.gene93911 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93911.t1 | MTR_4g033215 | 98.194 | 775 | 14 | 0 | 1 | 775 | 270 | 1044 | 0.0 | 1596 |
| MS.gene93911.t1 | MTR_7g092770 | 64.903 | 775 | 259 | 8 | 7 | 775 | 8 | 775 | 0.0 | 1065 |
| MS.gene93911.t1 | MTR_0305s0020 | 65.806 | 775 | 251 | 9 | 7 | 775 | 8 | 774 | 0.0 | 1047 |
| MS.gene93911.t1 | MTR_4g066150 | 64.258 | 775 | 268 | 6 | 2 | 775 | 4 | 770 | 0.0 | 1038 |
| MS.gene93911.t1 | MTR_5g010390 | 62.868 | 781 | 276 | 8 | 4 | 775 | 232 | 1007 | 0.0 | 1033 |
| MS.gene93911.t1 | MTR_3g027150 | 60.000 | 790 | 293 | 6 | 7 | 775 | 35 | 822 | 0.0 | 998 |
| MS.gene93911.t1 | MTR_0291s0010 | 59.217 | 792 | 303 | 7 | 2 | 775 | 8 | 797 | 0.0 | 990 |
| MS.gene93911.t1 | MTR_4g023460 | 61.508 | 756 | 285 | 3 | 25 | 775 | 388 | 1142 | 0.0 | 988 |
| MS.gene93911.t1 | MTR_7g076900 | 55.400 | 787 | 325 | 9 | 7 | 775 | 235 | 1013 | 0.0 | 907 |
| MS.gene93911.t1 | MTR_8g031270 | 56.082 | 781 | 321 | 10 | 7 | 775 | 233 | 1003 | 0.0 | 899 |
| MS.gene93911.t1 | MTR_4g057675 | 50.699 | 787 | 359 | 11 | 3 | 775 | 12 | 783 | 0.0 | 767 |
| MS.gene93911.t1 | MTR_4g071870 | 48.539 | 787 | 342 | 12 | 3 | 775 | 12 | 749 | 0.0 | 731 |
| MS.gene93911.t1 | MTR_4g107850 | 49.738 | 764 | 335 | 16 | 33 | 775 | 303 | 1038 | 0.0 | 729 |
| MS.gene93911.t1 | MTR_6g027540 | 47.963 | 761 | 353 | 12 | 33 | 775 | 274 | 1009 | 0.0 | 710 |
| MS.gene93911.t1 | MTR_6g028050 | 44.837 | 765 | 380 | 14 | 31 | 775 | 284 | 1026 | 0.0 | 675 |
| MS.gene93911.t1 | MTR_1g015540 | 44.882 | 762 | 385 | 13 | 28 | 770 | 23 | 768 | 0.0 | 613 |
| MS.gene93911.t1 | MTR_5g096980 | 37.582 | 761 | 442 | 13 | 29 | 775 | 22 | 763 | 1.15e-170 | 510 |
| MS.gene93911.t1 | MTR_4g023250 | 60.000 | 130 | 50 | 1 | 645 | 774 | 1 | 128 | 1.78e-49 | 170 |
| MS.gene93911.t1 | MTR_4g023230 | 47.541 | 122 | 49 | 1 | 562 | 683 | 49 | 155 | 3.11e-30 | 117 |
| MS.gene93911.t1 | MTR_4g023390 | 47.115 | 104 | 33 | 2 | 648 | 751 | 16 | 97 | 1.39e-22 | 93.2 |
| MS.gene93911.t1 | MTR_4g023240 | 60.000 | 60 | 24 | 0 | 496 | 555 | 10 | 69 | 7.94e-16 | 73.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93911.t1 | AT1G22610 | 79.692 | 778 | 153 | 1 | 3 | 775 | 252 | 1029 | 0.0 | 1312 |
| MS.gene93911.t1 | AT3G57880 | 66.150 | 774 | 249 | 8 | 7 | 775 | 8 | 773 | 0.0 | 1070 |
| MS.gene93911.t1 | AT3G57880 | 66.150 | 774 | 249 | 8 | 7 | 775 | 8 | 773 | 0.0 | 1070 |
| MS.gene93911.t1 | AT3G57880 | 66.150 | 774 | 249 | 8 | 7 | 775 | 8 | 773 | 0.0 | 1070 |
| MS.gene93911.t1 | AT3G57880 | 66.150 | 774 | 249 | 8 | 7 | 775 | 8 | 773 | 0.0 | 1070 |
| MS.gene93911.t1 | AT1G51570 | 65.464 | 776 | 254 | 8 | 7 | 775 | 8 | 776 | 0.0 | 1057 |
| MS.gene93911.t1 | AT5G12970 | 64.903 | 775 | 262 | 7 | 2 | 775 | 4 | 769 | 0.0 | 1044 |
| MS.gene93911.t1 | AT4G11610 | 62.868 | 781 | 275 | 9 | 4 | 775 | 237 | 1011 | 0.0 | 1021 |
| MS.gene93911.t1 | AT4G11610 | 62.868 | 781 | 275 | 9 | 4 | 775 | 233 | 1007 | 0.0 | 1020 |
| MS.gene93911.t1 | AT4G11610 | 62.868 | 781 | 275 | 9 | 4 | 775 | 100 | 874 | 0.0 | 1020 |
| MS.gene93911.t1 | AT5G06850 | 59.010 | 788 | 307 | 4 | 3 | 775 | 8 | 794 | 0.0 | 996 |
| MS.gene93911.t1 | AT5G48060 | 61.265 | 759 | 285 | 6 | 25 | 775 | 279 | 1036 | 0.0 | 981 |
| MS.gene93911.t1 | AT4G00700 | 55.089 | 786 | 330 | 10 | 6 | 775 | 228 | 1006 | 0.0 | 880 |
| MS.gene93911.t1 | AT4G00700 | 55.089 | 786 | 330 | 10 | 6 | 775 | 228 | 1006 | 0.0 | 880 |
| MS.gene93911.t1 | AT3G61300 | 54.113 | 778 | 324 | 14 | 6 | 775 | 220 | 972 | 0.0 | 872 |
| MS.gene93911.t1 | AT1G04150 | 54.293 | 792 | 319 | 13 | 7 | 775 | 241 | 1012 | 0.0 | 849 |
| MS.gene93911.t1 | AT4G20080 | 50.258 | 776 | 362 | 11 | 8 | 775 | 15 | 774 | 0.0 | 806 |
| MS.gene93911.t1 | AT1G74720 | 49.161 | 775 | 351 | 15 | 28 | 775 | 323 | 1081 | 0.0 | 736 |
| MS.gene93911.t1 | AT3G03680 | 47.903 | 787 | 352 | 16 | 16 | 775 | 262 | 1017 | 0.0 | 722 |
| MS.gene93911.t1 | AT5G17980 | 46.447 | 760 | 368 | 16 | 31 | 775 | 314 | 1049 | 0.0 | 684 |
| MS.gene93911.t1 | AT3G61720 | 36.375 | 789 | 431 | 23 | 31 | 774 | 32 | 794 | 6.85e-149 | 455 |
| MS.gene93911.t1 | AT5G03435 | 36.551 | 777 | 436 | 22 | 7 | 769 | 7 | 740 | 1.39e-142 | 437 |
| MS.gene93911.t1 | AT5G03435 | 38.927 | 578 | 316 | 14 | 7 | 575 | 7 | 556 | 6.57e-121 | 375 |
| MS.gene93911.t1 | AT5G44760 | 42.289 | 402 | 186 | 10 | 7 | 404 | 5 | 364 | 9.05e-93 | 298 |
| MS.gene93911.t1 | AT5G44760 | 23.392 | 513 | 260 | 15 | 201 | 677 | 36 | 451 | 1.25e-17 | 87.0 |
| MS.gene93911.t1 | AT1G03370 | 39.024 | 123 | 71 | 3 | 42 | 163 | 3 | 122 | 1.68e-14 | 78.2 |
| MS.gene93911.t1 | AT1G03370 | 39.024 | 123 | 71 | 3 | 42 | 163 | 3 | 122 | 2.15e-14 | 77.8 |
Find 193 sgRNAs with CRISPR-Local
Find 213 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGGTTGAACATAATGCATTT+TGG | 0.124007 | 4.4:-70194625 | None:intergenic |
| TGAGAGGCTTTAACCCTATT+TGG | 0.166763 | 4.4:+70193818 | MS.gene93911:CDS |
| CAACTATAATTGCTATAAAT+TGG | 0.221955 | 4.4:-70195292 | None:intergenic |
| TACTCATTATTATCCTCTTT+TGG | 0.232381 | 4.4:+70194494 | MS.gene93911:CDS |
| TGAACAAGGCAAGTTGTAAT+TGG | 0.232879 | 4.4:-70194882 | None:intergenic |
| TTTCTTTACTTGTTTGTGAT+TGG | 0.239952 | 4.4:+70194957 | MS.gene93911:CDS |
| ACGAGCATCCGGAAGCTTTC+CGG | 0.246203 | 4.4:-70193983 | None:intergenic |
| GTTTCCACCAATGCATATTC+TGG | 0.248708 | 4.4:-70193103 | None:intergenic |
| TCCTAACAATATTGAAATCT+TGG | 0.261337 | 4.4:+70193915 | MS.gene93911:CDS |
| CCTTCATAGGTAGCAAATTC+CGG | 0.278494 | 4.4:-70194218 | None:intergenic |
| ATAAGCTCCTCGTTCCAAAT+AGG | 0.279173 | 4.4:-70193832 | None:intergenic |
| TTCTTTACTTGTTTGTGATT+GGG | 0.281409 | 4.4:+70194958 | MS.gene93911:CDS |
| TGACATTATGCGATGAAAAT+TGG | 0.281887 | 4.4:-70194799 | None:intergenic |
| TCATCATCTTCTCACTGATC+TGG | 0.283757 | 4.4:+70195243 | MS.gene93911:CDS |
| CATATTCTGGATTCTGCTTT+GGG | 0.284632 | 4.4:-70193090 | None:intergenic |
| TCAGATCATTGTATCTGATT+TGG | 0.286145 | 4.4:-70195393 | None:intergenic |
| AACCCATTTGTTTCCATACT+TGG | 0.294660 | 4.4:-70194277 | None:intergenic |
| CATTGATTGGCTCCGCTATC+AGG | 0.304148 | 4.4:+70194662 | MS.gene93911:CDS |
| GCATATTCTGGATTCTGCTT+TGG | 0.308566 | 4.4:-70193091 | None:intergenic |
| GTGACAGTTGAGGACAAATT+TGG | 0.316140 | 4.4:+70193892 | MS.gene93911:CDS |
| TTGCACAGCTTGGGTTAATA+TGG | 0.320005 | 4.4:+70194575 | MS.gene93911:CDS |
| ATGGTTGGCAGTATCAATTC+AGG | 0.324194 | 4.4:-70194933 | None:intergenic |
| GCATACTGTGTTGCCAAGTA+TGG | 0.338450 | 4.4:+70194264 | MS.gene93911:CDS |
| TTCCAATTCTCTGATCTTTG+TGG | 0.338538 | 4.4:-70194428 | None:intergenic |
| CCCAAGATTTCAATATTGTT+AGG | 0.347422 | 4.4:-70193916 | None:intergenic |
| GAGTTCCACAAGCTTCTGTT+AGG | 0.347484 | 4.4:+70193752 | MS.gene93911:CDS |
| GAATTGGAAAGGTGAGAATA+AGG | 0.347930 | 4.4:+70194442 | MS.gene93911:CDS |
| ACTTGTTTGTGATTGGGATT+TGG | 0.356204 | 4.4:+70194964 | MS.gene93911:CDS |
| TGATTGGGATTTGGAATTAC+CGG | 0.361185 | 4.4:+70194973 | MS.gene93911:CDS |
| AGCTTGTCATCCAGATGAAT+TGG | 0.369444 | 4.4:+70195046 | MS.gene93911:CDS |
| GGATTTGGAATTACCGGTTC+CGG | 0.369744 | 4.4:+70194979 | MS.gene93911:CDS |
| GATTTGGTTACTCATGATAA+AGG | 0.374508 | 4.4:+70193727 | MS.gene93911:CDS |
| AGTGATTGAAGCTCAAGATT+TGG | 0.375103 | 4.4:+70193711 | MS.gene93911:CDS |
| GACCACAAAGATCAGAGAAT+TGG | 0.375978 | 4.4:+70194426 | MS.gene93911:CDS |
| CCAAGTTTCACTTCCACATA+AGG | 0.380141 | 4.4:-70193274 | None:intergenic |
| AATCTCTTGAAGAAATTAAC+TGG | 0.381502 | 4.4:-70195365 | None:intergenic |
| TTCATAGACCTAGCGCGGTC+GGG | 0.388551 | 4.4:+70194016 | MS.gene93911:CDS |
| ATCTTAATGAAGTGCCGGTT+AGG | 0.389058 | 4.4:+70193461 | MS.gene93911:CDS |
| CTACCATCTTTGCCCTTCAT+AGG | 0.399165 | 4.4:-70194231 | None:intergenic |
| ATTGGAGACCGGAAAGCTTC+CGG | 0.401323 | 4.4:+70193975 | MS.gene93911:CDS |
| GCAGCTAGGTTGAGGTATAA+AGG | 0.402038 | 4.4:+70193139 | MS.gene93911:CDS |
| TGAGGTTTACTTGCACAGCT+TGG | 0.403193 | 4.4:+70194565 | MS.gene93911:CDS |
| TAAGCTCCTCGTTCCAAATA+GGG | 0.405460 | 4.4:-70193831 | None:intergenic |
| GGCTCCTCAGTGGTATAGAT+TGG | 0.406615 | 4.4:+70193504 | MS.gene93911:CDS |
| CTAAATCTCCAACCACAGTT+TGG | 0.407369 | 4.4:-70195157 | None:intergenic |
| AGCCAATCAATGTGTCTAAC+AGG | 0.409018 | 4.4:-70194651 | None:intergenic |
| GAGGTTTACTTGCACAGCTT+GGG | 0.411394 | 4.4:+70194566 | MS.gene93911:CDS |
| CTATCCGGCGGAACCCTAAC+CGG | 0.413279 | 4.4:-70193475 | None:intergenic |
| CCGGAATTTGCTACCTATGA+AGG | 0.416546 | 4.4:+70194218 | MS.gene93911:CDS |
| TACCTGTTAGACACATTGAT+TGG | 0.416771 | 4.4:+70194649 | MS.gene93911:CDS |
| GTATACTGCTCATTCCATCT+AGG | 0.418342 | 4.4:-70194330 | None:intergenic |
| CTTCATAGGTAGCAAATTCC+GGG | 0.419673 | 4.4:-70194217 | None:intergenic |
| GAACAAGGCAAGTTGTAATT+GGG | 0.420619 | 4.4:-70194881 | None:intergenic |
| GTGAAATTATGCTTGCTGTT+TGG | 0.421078 | 4.4:+70193557 | MS.gene93911:CDS |
| ATAAGAATCAGCATCCTGTT+TGG | 0.424122 | 4.4:+70193326 | MS.gene93911:CDS |
| GGTTCCGCCGGATAGTCCTT+TGG | 0.424308 | 4.4:+70193483 | MS.gene93911:CDS |
| TCTTCCTCCCCGACCGCGCT+AGG | 0.430116 | 4.4:-70194024 | None:intergenic |
| AATTCCTCATCCAATTCATC+TGG | 0.433329 | 4.4:-70195056 | None:intergenic |
| GTGGATTCCTTGGCCGGAAC+CGG | 0.433338 | 4.4:-70194992 | None:intergenic |
| CCTAACAATATTGAAATCTT+GGG | 0.436106 | 4.4:+70193916 | MS.gene93911:CDS |
| GAGCTCAAGCTTTACTGAGT+TGG | 0.439961 | 4.4:+70195195 | MS.gene93911:CDS |
| GCAAAGATTTGCTTCCAAAC+AGG | 0.440169 | 4.4:-70193340 | None:intergenic |
| GAGAAATGTTCCGCAAAGAT+TGG | 0.442111 | 4.4:+70193957 | MS.gene93911:CDS |
| CTTCCTGTGATGGATATAAC+AGG | 0.444787 | 4.4:+70193241 | MS.gene93911:CDS |
| CATCATCTTCTCACTGATCT+GGG | 0.444824 | 4.4:+70195244 | MS.gene93911:CDS |
| CAAGTTTCACTTCCACATAA+GGG | 0.444872 | 4.4:-70193273 | None:intergenic |
| CTCCGAATTTGTCTTGAGGC+GGG | 0.445589 | 4.4:+70194087 | MS.gene93911:CDS |
| ATTCTAAGATAATAAAGCTT+AGG | 0.448617 | 4.4:-70193685 | None:intergenic |
| TTCTCCTTAGACTCCACATA+TGG | 0.451473 | 4.4:-70194770 | None:intergenic |
| ATTACCATATGTGGAGTCTA+AGG | 0.455668 | 4.4:+70194766 | MS.gene93911:CDS |
| CTCCTCAAGTGTTTCGAAGA+CGG | 0.456677 | 4.4:-70194156 | None:intergenic |
| TTTCCGGTCTCCAATCTTTG+CGG | 0.458718 | 4.4:-70193967 | None:intergenic |
| CAATTTATAGCAATTATAGT+TGG | 0.463673 | 4.4:+70195293 | MS.gene93911:CDS |
| GAACGAGGAGCTTATGTTTG+TGG | 0.463949 | 4.4:+70193840 | MS.gene93911:CDS |
| CGCGGTCGGGGAGGAAGAAA+CGG | 0.464656 | 4.4:+70194029 | MS.gene93911:CDS |
| TCTTCATGCTGCGTCATCCT+CGG | 0.465845 | 4.4:+70195318 | MS.gene93911:CDS |
| GAGGTATAAAGGAGGGCATA+AGG | 0.466959 | 4.4:+70193150 | MS.gene93911:CDS |
| ATATCAGCAGGTCTTGTAGT+TGG | 0.468121 | 4.4:-70195089 | None:intergenic |
| TTGACACACTGTCCCCTAGA+TGG | 0.468348 | 4.4:+70194316 | MS.gene93911:CDS |
| ACATTGGATATCTCGAACTC+GGG | 0.475864 | 4.4:+70194184 | MS.gene93911:CDS |
| TCTTAATGAAGTGCCGGTTA+GGG | 0.476718 | 4.4:+70193462 | MS.gene93911:CDS |
| ACCCCGCCTCAAGACAAATT+CGG | 0.477483 | 4.4:-70194089 | None:intergenic |
| GGAAGAAACGGAGAGAAAGA+AGG | 0.480058 | 4.4:+70194041 | MS.gene93911:CDS |
| TCCATGTGAGGTGGATTCCT+TGG | 0.486265 | 4.4:-70195002 | None:intergenic |
| TGAGGAGCCAAAGGACTATC+CGG | 0.491599 | 4.4:-70193490 | None:intergenic |
| TATACTGCTCATTCCATCTA+GGG | 0.496045 | 4.4:-70194329 | None:intergenic |
| CTACCTATGAAGGGCAAAGA+TGG | 0.497187 | 4.4:+70194228 | MS.gene93911:CDS |
| CACCACTTGCAGCTAGGTTG+AGG | 0.497949 | 4.4:+70193131 | MS.gene93911:CDS |
| TTGCCAAGTATGGAAACAAA+TGG | 0.503643 | 4.4:+70194274 | MS.gene93911:CDS |
| AATTATGCTTGCTGTTTGGA+TGG | 0.504180 | 4.4:+70193561 | MS.gene93911:CDS |
| TCGCATAATGTCACTACTCT+CGG | 0.504638 | 4.4:+70194809 | MS.gene93911:CDS |
| ACAATTATAATATCCTCAAA+AGG | 0.505624 | 4.4:-70193871 | None:intergenic |
| AGATTGAACCAACGAGCATC+CGG | 0.511725 | 4.4:-70193994 | None:intergenic |
| TGTGGTCACTGCTACCATTG+AGG | 0.518823 | 4.4:-70194410 | None:intergenic |
| GCATCAGAATGCCATGCCTC+AGG | 0.521107 | 4.4:-70193607 | None:intergenic |
| CGCATAATGTCACTACTCTC+GGG | 0.522301 | 4.4:+70194810 | MS.gene93911:CDS |
| CTTCATAGACCTAGCGCGGT+CGG | 0.522645 | 4.4:+70194015 | MS.gene93911:CDS |
| CTCATTCGAACAATATCAGC+AGG | 0.525290 | 4.4:-70195101 | None:intergenic |
| TTTACTTGAAGTTACTGTGA+AGG | 0.525641 | 4.4:+70193390 | MS.gene93911:CDS |
| AGCAAAAGAACTTCCTGTGA+TGG | 0.526165 | 4.4:+70193231 | MS.gene93911:CDS |
| AACTCGGGATACTTAGTGCC+CGG | 0.528434 | 4.4:+70194199 | MS.gene93911:CDS |
| TGTGAGGTGGATTCCTTGGC+CGG | 0.528935 | 4.4:-70194998 | None:intergenic |
| GGAATTACCGGTTCCGGCCA+AGG | 0.528999 | 4.4:+70194985 | MS.gene93911:CDS |
| TTTGACAATCACCACCTCAA+TGG | 0.529571 | 4.4:+70194396 | MS.gene93911:CDS |
| ATAATTGCTATAAATTGGAA+TGG | 0.531398 | 4.4:-70195287 | None:intergenic |
| TCATAGACCTAGCGCGGTCG+GGG | 0.532325 | 4.4:+70194017 | MS.gene93911:CDS |
| TGCCAAGTATGGAAACAAAT+GGG | 0.532532 | 4.4:+70194275 | MS.gene93911:CDS |
| GGCAATTTGCTTCGAAACCG+AGG | 0.534396 | 4.4:-70195335 | None:intergenic |
| TTGAGCTCTTTCGCCTTGAG+TGG | 0.534744 | 4.4:-70195180 | None:intergenic |
| AACATTGGATATCTCGAACT+CGG | 0.535580 | 4.4:+70194183 | MS.gene93911:CDS |
| AAAGGGATGAAGATAAATCA+TGG | 0.536402 | 4.4:+70193535 | MS.gene93911:CDS |
| AACCGTCTTCGAAACACTTG+AGG | 0.536418 | 4.4:+70194154 | MS.gene93911:CDS |
| TCCGAATTTGTCTTGAGGCG+GGG | 0.536647 | 4.4:+70194088 | MS.gene93911:CDS |
| CCTTATGTGGAAGTGAAACT+TGG | 0.541605 | 4.4:+70193274 | MS.gene93911:CDS |
| GTTTGATCTTAATGAAGTGC+CGG | 0.542712 | 4.4:+70193456 | MS.gene93911:CDS |
| TTAGGTTGAAGAACCAAAAG+AGG | 0.547365 | 4.4:-70194507 | None:intergenic |
| CATGGATGCTAGGCTTTCAC+AGG | 0.547979 | 4.4:+70195019 | MS.gene93911:CDS |
| TCCTCAGTGGTATAGATTGG+AGG | 0.548476 | 4.4:+70193507 | MS.gene93911:CDS |
| GCCAAGGAATCCACCTCACA+TGG | 0.549034 | 4.4:+70195001 | MS.gene93911:CDS |
| AAGAAATTAACTGGTACTGA+TGG | 0.550550 | 4.4:-70195356 | None:intergenic |
| TACTGAGTTGGAGAGACTCA+AGG | 0.551057 | 4.4:+70195207 | MS.gene93911:CDS |
| ATCCACCTCACATGGATGCT+AGG | 0.551946 | 4.4:+70195009 | MS.gene93911:CDS |
| AGTTCCACAAGCTTCTGTTA+GGG | 0.553072 | 4.4:+70193753 | MS.gene93911:CDS |
| AGGAAGTCTTGACCCTTATG+TGG | 0.554282 | 4.4:+70193261 | MS.gene93911:CDS |
| GGTAGAGTCCAAACTGTGGT+TGG | 0.554358 | 4.4:+70195149 | MS.gene93911:CDS |
| CTTCCTGTTATATCCATCAC+AGG | 0.554956 | 4.4:-70193244 | None:intergenic |
| GGCTTAACGACATTTGCACT+TGG | 0.556646 | 4.4:+70194853 | MS.gene93911:CDS |
| TCAATGTGTCTAACAGGTAT+CGG | 0.558957 | 4.4:-70194645 | None:intergenic |
| CCTTGCTGCCACAATCTGCA+TGG | 0.563384 | 4.4:-70194685 | None:intergenic |
| AAAGAATGGAGAGCTGCACT+TGG | 0.565426 | 4.4:+70194539 | MS.gene93911:CDS |
| GAATCCAGAATATGCATTGG+TGG | 0.567312 | 4.4:+70193099 | MS.gene93911:CDS |
| GAAAGCTTCCGGATGCTCGT+TGG | 0.567546 | 4.4:+70193986 | MS.gene93911:CDS |
| CTATCAGGCCATGCAGATTG+TGG | 0.567929 | 4.4:+70194677 | MS.gene93911:CDS |
| CAGCTCCACCACTTGCAGCT+AGG | 0.568046 | 4.4:+70193125 | MS.gene93911:CDS |
| ATCATTGTATCTGATTTGGA+AGG | 0.569129 | 4.4:-70195389 | None:intergenic |
| TACGACAGATTGAGAAGTGT+GGG | 0.570803 | 4.4:+70195125 | MS.gene93911:CDS |
| ACAAGGGTTTCTCAAATGAG+AGG | 0.571760 | 4.4:+70193802 | MS.gene93911:CDS |
| GTTGGAGATTTAGCCACTCA+AGG | 0.572360 | 4.4:+70195167 | MS.gene93911:CDS |
| TCTCCGAATTTGTCTTGAGG+CGG | 0.574374 | 4.4:+70194086 | MS.gene93911:CDS |
| ACAATATTGAAATCTTGGGA+AGG | 0.576231 | 4.4:+70193920 | MS.gene93911:CDS |
| ATTATGCTTGCTGTTTGGAT+GGG | 0.582370 | 4.4:+70193562 | MS.gene93911:CDS |
| CTATACCACTGAGGAGCCAA+AGG | 0.584006 | 4.4:-70193499 | None:intergenic |
| TCATCCAGATGAATTGGATG+AGG | 0.584013 | 4.4:+70195052 | MS.gene93911:CDS |
| TGGTTGGCAGTATCAATTCA+GGG | 0.584676 | 4.4:-70194932 | None:intergenic |
| GATGGAATGAGCAGTATACA+TGG | 0.585191 | 4.4:+70194334 | MS.gene93911:CDS |
| CTGCTGATATTGTTCGAATG+AGG | 0.587966 | 4.4:+70195102 | MS.gene93911:CDS |
| CGGAATTTGCTACCTATGAA+GGG | 0.588456 | 4.4:+70194219 | MS.gene93911:CDS |
| CTTTAACCCTATTTGGAACG+AGG | 0.591388 | 4.4:+70193825 | MS.gene93911:CDS |
| CCATGCAGATTGTGGCAGCA+AGG | 0.592875 | 4.4:+70194685 | MS.gene93911:CDS |
| CCTTCGATCGCGTATTCGAG+AGG | 0.593012 | 4.4:-70193651 | None:intergenic |
| CAATATTGAAATCTTGGGAA+GGG | 0.594946 | 4.4:+70193921 | MS.gene93911:CDS |
| ACTGAGTTGGAGAGACTCAA+GGG | 0.596495 | 4.4:+70195208 | MS.gene93911:CDS |
| CTAACTGTGATCACAGTGCA+TGG | 0.599529 | 4.4:-70194369 | None:intergenic |
| CAAAGATCAGAGAATTGGAA+AGG | 0.600718 | 4.4:+70194431 | MS.gene93911:CDS |
| TATTATAATTGTGACAGTTG+AGG | 0.601359 | 4.4:+70193882 | MS.gene93911:CDS |
| TCAACTGATTCACGTCGAAG+TGG | 0.602308 | 4.4:-70194726 | None:intergenic |
| GTGAAACTTGGTAACTACAA+AGG | 0.604614 | 4.4:+70193286 | MS.gene93911:CDS |
| CCTCTCGAATACGCGATCGA+AGG | 0.607582 | 4.4:+70193651 | MS.gene93911:CDS |
| AGCCTAGCATCCATGTGAGG+TGG | 0.607689 | 4.4:-70195011 | None:intergenic |
| CTCAACCTAGCTGCAAGTGG+TGG | 0.612125 | 4.4:-70193130 | None:intergenic |
| TCATCTCCGAATTTGTCTTG+AGG | 0.614427 | 4.4:+70194083 | MS.gene93911:CDS |
| GCAGAATCCAGAATATGCAT+TGG | 0.615456 | 4.4:+70193096 | MS.gene93911:CDS |
| GTTCCGCAAAGATTGGAGAC+CGG | 0.616738 | 4.4:+70193964 | MS.gene93911:CDS |
| CAATCTGCATGGCCTGATAG+CGG | 0.622267 | 4.4:-70194674 | None:intergenic |
| CGTCTTCGAAACACTTGAGG+AGG | 0.625391 | 4.4:+70194157 | MS.gene93911:CDS |
| GAGAGCTGCACTTGGCTGTG+AGG | 0.625943 | 4.4:+70194547 | MS.gene93911:CDS |
| TACCTCAACCTAGCTGCAAG+TGG | 0.626178 | 4.4:-70193133 | None:intergenic |
| TAGACCTAGCGCGGTCGGGG+AGG | 0.629162 | 4.4:+70194020 | MS.gene93911:CDS |
| GTATAAAGGAGGGCATAAGG+TGG | 0.637550 | 4.4:+70193153 | MS.gene93911:CDS |
| AGTTGAGTATATGCTTGATG+TGG | 0.638952 | 4.4:+70194743 | MS.gene93911:CDS |
| AGTGCCGGTTAGGGTTCCGC+CGG | 0.639109 | 4.4:+70193471 | MS.gene93911:CDS |
| CTTGGGAAGGGAGATTATGT+CGG | 0.642034 | 4.4:+70193933 | MS.gene93911:CDS |
| GCTTCTGTTAGGGTTCAGCT+AGG | 0.645640 | 4.4:+70193763 | MS.gene93911:CDS |
| GTACGACAGATTGAGAAGTG+TGG | 0.649017 | 4.4:+70195124 | MS.gene93911:CDS |
| GAAGTCAGATGAGATTCACA+AGG | 0.656489 | 4.4:+70193785 | MS.gene93911:CDS |
| CTAGGTTGAGGTATAAAGGA+GGG | 0.657817 | 4.4:+70193143 | MS.gene93911:CDS |
| TTGATGTGGATTACCATATG+TGG | 0.664898 | 4.4:+70194757 | MS.gene93911:CDS |
| GCTAGGTTGAGGTATAAAGG+AGG | 0.666305 | 4.4:+70193142 | MS.gene93911:CDS |
| ATAGTCCTTTGGCTCCTCAG+TGG | 0.669744 | 4.4:+70193494 | MS.gene93911:CDS |
| AAGTCAGATGAGATTCACAA+GGG | 0.671394 | 4.4:+70193786 | MS.gene93911:CDS |
| ACTGATTCACGTCGAAGTGG+CGG | 0.671903 | 4.4:-70194723 | None:intergenic |
| ATGGAATGAGCAGTATACAT+GGG | 0.673909 | 4.4:+70194335 | MS.gene93911:CDS |
| CAATCTTCATAGACCTAGCG+CGG | 0.678986 | 4.4:+70194011 | MS.gene93911:CDS |
| GAATGAGCAGTATACATGGG+AGG | 0.691843 | 4.4:+70194338 | MS.gene93911:CDS |
| GGTCACTGCTACCATTGAGG+TGG | 0.693069 | 4.4:-70194407 | None:intergenic |
| ATACTGCTCATTCCATCTAG+GGG | 0.694930 | 4.4:-70194328 | None:intergenic |
| TCAAGAACAAGACATGAACA+AGG | 0.696192 | 4.4:-70194896 | None:intergenic |
| GACAGATTGAGAAGTGTGGG+AGG | 0.712782 | 4.4:+70195128 | MS.gene93911:CDS |
| TGAACCCTAACAGAAGCTTG+TGG | 0.729603 | 4.4:-70193757 | None:intergenic |
| GGAGCCAAAGGACTATCCGG+CGG | 0.738578 | 4.4:-70193487 | None:intergenic |
| TCCTCCAATCTATACCACTG+AGG | 0.743340 | 4.4:-70193508 | None:intergenic |
| GAAAGCCTAGCATCCATGTG+AGG | 0.756739 | 4.4:-70195014 | None:intergenic |
| GGGAGGTAGAGTCCAAACTG+TGG | 0.795354 | 4.4:+70195145 | MS.gene93911:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACAATTATAATATCCTCAAA+AGG | - | chr4.4:70193874-70193893 | None:intergenic | 20.0% |
| !! | ATAATTGCTATAAATTGGAA+TGG | - | chr4.4:70195290-70195309 | None:intergenic | 20.0% |
| !! | CAACTATAATTGCTATAAAT+TGG | - | chr4.4:70195295-70195314 | None:intergenic | 20.0% |
| !! | CAATTTATAGCAATTATAGT+TGG | + | chr4.4:70195293-70195312 | MS.gene93911:CDS | 20.0% |
| !!! | ATTCTAAGATAATAAAGCTT+AGG | - | chr4.4:70193688-70193707 | None:intergenic | 20.0% |
| ! | AACAAGTAAAGAAAAATGGT+TGG | - | chr4.4:70194951-70194970 | None:intergenic | 25.0% |
| ! | AATCTCTTGAAGAAATTAAC+TGG | - | chr4.4:70195368-70195387 | None:intergenic | 25.0% |
| ! | ATAGATTGGAGGATAAAAAA+GGG | + | chr4.4:70193518-70193537 | MS.gene93911:CDS | 25.0% |
| ! | CACAAACAAGTAAAGAAAAA+TGG | - | chr4.4:70194955-70194974 | None:intergenic | 25.0% |
| ! | CCTAACAATATTGAAATCTT+GGG | + | chr4.4:70193916-70193935 | MS.gene93911:CDS | 25.0% |
| ! | TATAGATTGGAGGATAAAAA+AGG | + | chr4.4:70193517-70193536 | MS.gene93911:CDS | 25.0% |
| ! | TATTATAATTGTGACAGTTG+AGG | + | chr4.4:70193882-70193901 | MS.gene93911:CDS | 25.0% |
| ! | TCCTAACAATATTGAAATCT+TGG | + | chr4.4:70193915-70193934 | MS.gene93911:CDS | 25.0% |
| ! | TTCACATACAAAAAATGCAT+TGG | - | chr4.4:70193202-70193221 | None:intergenic | 25.0% |
| ! | TTCTTTACTTGTTTGTGATT+GGG | + | chr4.4:70194958-70194977 | MS.gene93911:CDS | 25.0% |
| ! | TTTCTTTACTTGTTTGTGAT+TGG | + | chr4.4:70194957-70194976 | MS.gene93911:CDS | 25.0% |
| !! | ATCAGTAAAGATGATTTTGT+TGG | + | chr4.4:70193424-70193443 | MS.gene93911:CDS | 25.0% |
| !! | TACTCATTATTATCCTCTTT+TGG | + | chr4.4:70194494-70194513 | MS.gene93911:CDS | 25.0% |
| AAAGGGATGAAGATAAATCA+TGG | + | chr4.4:70193535-70193554 | MS.gene93911:CDS | 30.0% | |
| ACAATATTGAAATCTTGGGA+AGG | + | chr4.4:70193920-70193939 | MS.gene93911:CDS | 30.0% | |
| CAATATTGAAATCTTGGGAA+GGG | + | chr4.4:70193921-70193940 | MS.gene93911:CDS | 30.0% | |
| CCCAAGATTTCAATATTGTT+AGG | - | chr4.4:70193919-70193938 | None:intergenic | 30.0% | |
| TCAGATCATTGTATCTGATT+TGG | - | chr4.4:70195396-70195415 | None:intergenic | 30.0% | |
| TGACATTATGCGATGAAAAT+TGG | - | chr4.4:70194802-70194821 | None:intergenic | 30.0% | |
| TTTACTTGAAGTTACTGTGA+AGG | + | chr4.4:70193390-70193409 | MS.gene93911:CDS | 30.0% | |
| ! | AAGAAATTAACTGGTACTGA+TGG | - | chr4.4:70195359-70195378 | None:intergenic | 30.0% |
| ! | GATTTGGTTACTCATGATAA+AGG | + | chr4.4:70193727-70193746 | MS.gene93911:CDS | 30.0% |
| ! | GGTTGAACATAATGCATTTT+GGG | - | chr4.4:70194627-70194646 | None:intergenic | 30.0% |
| ! | GTAAAGATGATTTTGTTGGT+AGG | + | chr4.4:70193428-70193447 | MS.gene93911:CDS | 30.0% |
| !! | ATCATTGTATCTGATTTGGA+AGG | - | chr4.4:70195392-70195411 | None:intergenic | 30.0% |
| !! | CCTAATGGGTTAAAAAAGAA+TGG | + | chr4.4:70194525-70194544 | MS.gene93911:CDS | 30.0% |
| !!! | CCATTCTTTTTTAACCCATT+AGG | - | chr4.4:70194528-70194547 | None:intergenic | 30.0% |
| !!! | TTTTGGTTCTTCAACCTAAT+GGG | + | chr4.4:70194511-70194530 | MS.gene93911:CDS | 30.0% |
| AACATTGGATATCTCGAACT+CGG | + | chr4.4:70194183-70194202 | MS.gene93911:CDS | 35.0% | |
| AACCCATTTGTTTCCATACT+TGG | - | chr4.4:70194280-70194299 | None:intergenic | 35.0% | |
| AAGTCAGATGAGATTCACAA+GGG | + | chr4.4:70193786-70193805 | MS.gene93911:CDS | 35.0% | |
| AATTCCTCATCCAATTCATC+TGG | - | chr4.4:70195059-70195078 | None:intergenic | 35.0% | |
| ACTTGTTTGTGATTGGGATT+TGG | + | chr4.4:70194964-70194983 | MS.gene93911:CDS | 35.0% | |
| AGTGATTGAAGCTCAAGATT+TGG | + | chr4.4:70193711-70193730 | MS.gene93911:CDS | 35.0% | |
| AGTTGAGTATATGCTTGATG+TGG | + | chr4.4:70194743-70194762 | MS.gene93911:CDS | 35.0% | |
| ATAAGAATCAGCATCCTGTT+TGG | + | chr4.4:70193326-70193345 | MS.gene93911:CDS | 35.0% | |
| ATGGAATGAGCAGTATACAT+GGG | + | chr4.4:70194335-70194354 | MS.gene93911:CDS | 35.0% | |
| ATTACCATATGTGGAGTCTA+AGG | + | chr4.4:70194766-70194785 | MS.gene93911:CDS | 35.0% | |
| CAAAGATCAGAGAATTGGAA+AGG | + | chr4.4:70194431-70194450 | MS.gene93911:CDS | 35.0% | |
| CAAGTTTCACTTCCACATAA+GGG | - | chr4.4:70193276-70193295 | None:intergenic | 35.0% | |
| CATATTCTGGATTCTGCTTT+GGG | - | chr4.4:70193093-70193112 | None:intergenic | 35.0% | |
| GAACAAGGCAAGTTGTAATT+GGG | - | chr4.4:70194884-70194903 | None:intergenic | 35.0% | |
| GAATTGGAAAGGTGAGAATA+AGG | + | chr4.4:70194442-70194461 | MS.gene93911:CDS | 35.0% | |
| GTTTGATCTTAATGAAGTGC+CGG | + | chr4.4:70193456-70193475 | MS.gene93911:CDS | 35.0% | |
| TACCTGTTAGACACATTGAT+TGG | + | chr4.4:70194649-70194668 | MS.gene93911:CDS | 35.0% | |
| TATACTGCTCATTCCATCTA+GGG | - | chr4.4:70194332-70194351 | None:intergenic | 35.0% | |
| TCAAGAACAAGACATGAACA+AGG | - | chr4.4:70194899-70194918 | None:intergenic | 35.0% | |
| TCAATGTGTCTAACAGGTAT+CGG | - | chr4.4:70194648-70194667 | None:intergenic | 35.0% | |
| TGAACAAGGCAAGTTGTAAT+TGG | - | chr4.4:70194885-70194904 | None:intergenic | 35.0% | |
| TGCCAAGTATGGAAACAAAT+GGG | + | chr4.4:70194275-70194294 | MS.gene93911:CDS | 35.0% | |
| TTCCAATTCTCTGATCTTTG+TGG | - | chr4.4:70194431-70194450 | None:intergenic | 35.0% | |
| TTGCCAAGTATGGAAACAAA+TGG | + | chr4.4:70194274-70194293 | MS.gene93911:CDS | 35.0% | |
| ! | CGGTTGAACATAATGCATTT+TGG | - | chr4.4:70194628-70194647 | None:intergenic | 35.0% |
| ! | GTGAAACTTGGTAACTACAA+AGG | + | chr4.4:70193286-70193305 | MS.gene93911:CDS | 35.0% |
| ! | GTTTTACTGCTGTGTGTAAA+TGG | + | chr4.4:70194832-70194851 | MS.gene93911:CDS | 35.0% |
| ! | TGATTGGGATTTGGAATTAC+CGG | + | chr4.4:70194973-70194992 | MS.gene93911:CDS | 35.0% |
| ! | TTGATGTGGATTACCATATG+TGG | + | chr4.4:70194757-70194776 | MS.gene93911:CDS | 35.0% |
| !! | AATTATGCTTGCTGTTTGGA+TGG | + | chr4.4:70193561-70193580 | MS.gene93911:CDS | 35.0% |
| !! | ATTATGCTTGCTGTTTGGAT+GGG | + | chr4.4:70193562-70193581 | MS.gene93911:CDS | 35.0% |
| !! | GTGAAATTATGCTTGCTGTT+TGG | + | chr4.4:70193557-70193576 | MS.gene93911:CDS | 35.0% |
| !! | TAATGCATTTTGGGAAGCAA+AGG | - | chr4.4:70194618-70194637 | None:intergenic | 35.0% |
| !! | TTAGGTTGAAGAACCAAAAG+AGG | - | chr4.4:70194510-70194529 | None:intergenic | 35.0% |
| !!! | CTTTTGGTTCTTCAACCTAA+TGG | + | chr4.4:70194510-70194529 | MS.gene93911:CDS | 35.0% |
| ACAAGGGTTTCTCAAATGAG+AGG | + | chr4.4:70193802-70193821 | MS.gene93911:CDS | 40.0% | |
| ACATTGGATATCTCGAACTC+GGG | + | chr4.4:70194184-70194203 | MS.gene93911:CDS | 40.0% | |
| AGCAAAAGAACTTCCTGTGA+TGG | + | chr4.4:70193231-70193250 | MS.gene93911:CDS | 40.0% | |
| AGCCAATCAATGTGTCTAAC+AGG | - | chr4.4:70194654-70194673 | None:intergenic | 40.0% | |
| AGCTTGTCATCCAGATGAAT+TGG | + | chr4.4:70195046-70195065 | MS.gene93911:CDS | 40.0% | |
| AGTTCCACAAGCTTCTGTTA+GGG | + | chr4.4:70193753-70193772 | MS.gene93911:CDS | 40.0% | |
| ATAAGCTCCTCGTTCCAAAT+AGG | - | chr4.4:70193835-70193854 | None:intergenic | 40.0% | |
| ATACTGCTCATTCCATCTAG+GGG | - | chr4.4:70194331-70194350 | None:intergenic | 40.0% | |
| ATGGTTGGCAGTATCAATTC+AGG | - | chr4.4:70194936-70194955 | None:intergenic | 40.0% | |
| CACTTGAGGAGGAAAAACAT+TGG | + | chr4.4:70194168-70194187 | MS.gene93911:CDS | 40.0% | |
| CATCATCTTCTCACTGATCT+GGG | + | chr4.4:70195244-70195263 | MS.gene93911:CDS | 40.0% | |
| CCAAGTTTCACTTCCACATA+AGG | - | chr4.4:70193277-70193296 | None:intergenic | 40.0% | |
| CCTTATGTGGAAGTGAAACT+TGG | + | chr4.4:70193274-70193293 | MS.gene93911:CDS | 40.0% | |
| CCTTCATAGGTAGCAAATTC+CGG | - | chr4.4:70194221-70194240 | None:intergenic | 40.0% | |
| CTAAATCTCCAACCACAGTT+TGG | - | chr4.4:70195160-70195179 | None:intergenic | 40.0% | |
| CTCATTCGAACAATATCAGC+AGG | - | chr4.4:70195104-70195123 | None:intergenic | 40.0% | |
| CTGCTGATATTGTTCGAATG+AGG | + | chr4.4:70195102-70195121 | MS.gene93911:CDS | 40.0% | |
| CTTCATAGGTAGCAAATTCC+GGG | - | chr4.4:70194220-70194239 | None:intergenic | 40.0% | |
| CTTCCTGTTATATCCATCAC+AGG | - | chr4.4:70193247-70193266 | None:intergenic | 40.0% | |
| GAAGTCAGATGAGATTCACA+AGG | + | chr4.4:70193785-70193804 | MS.gene93911:CDS | 40.0% | |
| GAATCCAGAATATGCATTGG+TGG | + | chr4.4:70193099-70193118 | MS.gene93911:CDS | 40.0% | |
| GACCACAAAGATCAGAGAAT+TGG | + | chr4.4:70194426-70194445 | MS.gene93911:CDS | 40.0% | |
| GAGAAATGTTCCGCAAAGAT+TGG | + | chr4.4:70193957-70193976 | MS.gene93911:CDS | 40.0% | |
| GATGGAATGAGCAGTATACA+TGG | + | chr4.4:70194334-70194353 | MS.gene93911:CDS | 40.0% | |
| GCAGAATCCAGAATATGCAT+TGG | + | chr4.4:70193096-70193115 | MS.gene93911:CDS | 40.0% | |
| GCATATTCTGGATTCTGCTT+TGG | - | chr4.4:70193094-70193113 | None:intergenic | 40.0% | |
| GTATACTGCTCATTCCATCT+AGG | - | chr4.4:70194333-70194352 | None:intergenic | 40.0% | |
| GTGACAGTTGAGGACAAATT+TGG | + | chr4.4:70193892-70193911 | MS.gene93911:CDS | 40.0% | |
| GTTTCCACCAATGCATATTC+TGG | - | chr4.4:70193106-70193125 | None:intergenic | 40.0% | |
| TAAGCTCCTCGTTCCAAATA+GGG | - | chr4.4:70193834-70193853 | None:intergenic | 40.0% | |
| TCATCATCTTCTCACTGATC+TGG | + | chr4.4:70195243-70195262 | MS.gene93911:CDS | 40.0% | |
| TCATCCAGATGAATTGGATG+AGG | + | chr4.4:70195052-70195071 | MS.gene93911:CDS | 40.0% | |
| TCATCTCCGAATTTGTCTTG+AGG | + | chr4.4:70194083-70194102 | MS.gene93911:CDS | 40.0% | |
| TCGCATAATGTCACTACTCT+CGG | + | chr4.4:70194809-70194828 | MS.gene93911:CDS | 40.0% | |
| TGGTTGGCAGTATCAATTCA+GGG | - | chr4.4:70194935-70194954 | None:intergenic | 40.0% | |
| TTCTCCTTAGACTCCACATA+TGG | - | chr4.4:70194773-70194792 | None:intergenic | 40.0% | |
| TTGCACAGCTTGGGTTAATA+TGG | + | chr4.4:70194575-70194594 | MS.gene93911:CDS | 40.0% | |
| TTTGACAATCACCACCTCAA+TGG | + | chr4.4:70194396-70194415 | MS.gene93911:CDS | 40.0% | |
| ! | ATATCAGCAGGTCTTGTAGT+TGG | - | chr4.4:70195092-70195111 | None:intergenic | 40.0% |
| ! | CTAGGTTGAGGTATAAAGGA+GGG | + | chr4.4:70193143-70193162 | MS.gene93911:CDS | 40.0% |
| ! | CTTTAACCCTATTTGGAACG+AGG | + | chr4.4:70193825-70193844 | MS.gene93911:CDS | 40.0% |
| ! | GCAAAGATTTGCTTCCAAAC+AGG | - | chr4.4:70193343-70193362 | None:intergenic | 40.0% |
| ! | GCAAATCTTTGCGTTTTCGA+AGG | + | chr4.4:70193351-70193370 | MS.gene93911:CDS | 40.0% |
| ! | TACGACAGATTGAGAAGTGT+GGG | + | chr4.4:70195125-70195144 | MS.gene93911:CDS | 40.0% |
| ! | TGAGAGGCTTTAACCCTATT+TGG | + | chr4.4:70193818-70193837 | MS.gene93911:CDS | 40.0% |
| !! | ATCTTAATGAAGTGCCGGTT+AGG | + | chr4.4:70193461-70193480 | MS.gene93911:CDS | 40.0% |
| !! | CGGAATTTGCTACCTATGAA+GGG | + | chr4.4:70194219-70194238 | MS.gene93911:CDS | 40.0% |
| !! | CTTCCTGTGATGGATATAAC+AGG | + | chr4.4:70193241-70193260 | MS.gene93911:CDS | 40.0% |
| !! | TCTTAATGAAGTGCCGGTTA+GGG | + | chr4.4:70193462-70193481 | MS.gene93911:CDS | 40.0% |
| AAAGAATGGAGAGCTGCACT+TGG | + | chr4.4:70194539-70194558 | MS.gene93911:CDS | 45.0% | |
| AACCGTCTTCGAAACACTTG+AGG | + | chr4.4:70194154-70194173 | MS.gene93911:CDS | 45.0% | |
| AGATTGAACCAACGAGCATC+CGG | - | chr4.4:70193997-70194016 | None:intergenic | 45.0% | |
| AGGAAGTCTTGACCCTTATG+TGG | + | chr4.4:70193261-70193280 | MS.gene93911:CDS | 45.0% | |
| CAATCTTCATAGACCTAGCG+CGG | + | chr4.4:70194011-70194030 | MS.gene93911:CDS | 45.0% | |
| CGCATAATGTCACTACTCTC+GGG | + | chr4.4:70194810-70194829 | MS.gene93911:CDS | 45.0% | |
| CTAACTGTGATCACAGTGCA+TGG | - | chr4.4:70194372-70194391 | None:intergenic | 45.0% | |
| CTACCATCTTTGCCCTTCAT+AGG | - | chr4.4:70194234-70194253 | None:intergenic | 45.0% | |
| CTACCTATGAAGGGCAAAGA+TGG | + | chr4.4:70194228-70194247 | MS.gene93911:CDS | 45.0% | |
| CTCCTCAAGTGTTTCGAAGA+CGG | - | chr4.4:70194159-70194178 | None:intergenic | 45.0% | |
| CTTGGGAAGGGAGATTATGT+CGG | + | chr4.4:70193933-70193952 | MS.gene93911:CDS | 45.0% | |
| GAACGAGGAGCTTATGTTTG+TGG | + | chr4.4:70193840-70193859 | MS.gene93911:CDS | 45.0% | |
| GAATGAGCAGTATACATGGG+AGG | + | chr4.4:70194338-70194357 | MS.gene93911:CDS | 45.0% | |
| GAGCTCAAGCTTTACTGAGT+TGG | + | chr4.4:70195195-70195214 | MS.gene93911:CDS | 45.0% | |
| GAGGTTTACTTGCACAGCTT+GGG | + | chr4.4:70194566-70194585 | MS.gene93911:CDS | 45.0% | |
| GAGTTCCACAAGCTTCTGTT+AGG | + | chr4.4:70193752-70193771 | MS.gene93911:CDS | 45.0% | |
| GCATACTGTGTTGCCAAGTA+TGG | + | chr4.4:70194264-70194283 | MS.gene93911:CDS | 45.0% | |
| GGAAGAAACGGAGAGAAAGA+AGG | + | chr4.4:70194041-70194060 | MS.gene93911:CDS | 45.0% | |
| GGCTTAACGACATTTGCACT+TGG | + | chr4.4:70194853-70194872 | MS.gene93911:CDS | 45.0% | |
| GTACGACAGATTGAGAAGTG+TGG | + | chr4.4:70195124-70195143 | MS.gene93911:CDS | 45.0% | |
| GTTGGAGATTTAGCCACTCA+AGG | + | chr4.4:70195167-70195186 | MS.gene93911:CDS | 45.0% | |
| TCCTCAGTGGTATAGATTGG+AGG | + | chr4.4:70193507-70193526 | MS.gene93911:CDS | 45.0% | |
| TCCTCCAATCTATACCACTG+AGG | - | chr4.4:70193511-70193530 | None:intergenic | 45.0% | |
| TCTCCGAATTTGTCTTGAGG+CGG | + | chr4.4:70194086-70194105 | MS.gene93911:CDS | 45.0% | |
| TGAACCCTAACAGAAGCTTG+TGG | - | chr4.4:70193760-70193779 | None:intergenic | 45.0% | |
| TGAGGTTTACTTGCACAGCT+TGG | + | chr4.4:70194565-70194584 | MS.gene93911:CDS | 45.0% | |
| TTTCCGGTCTCCAATCTTTG+CGG | - | chr4.4:70193970-70193989 | None:intergenic | 45.0% | |
| ! | ACTGAGTTGGAGAGACTCAA+GGG | + | chr4.4:70195208-70195227 | MS.gene93911:CDS | 45.0% |
| ! | AGCTGATGAGTCTTTTCCTG+AGG | + | chr4.4:70193591-70193610 | MS.gene93911:CDS | 45.0% |
| ! | ATGAGTCTTTTCCTGAGGCA+TGG | + | chr4.4:70193596-70193615 | MS.gene93911:CDS | 45.0% |
| ! | GAGGTATAAAGGAGGGCATA+AGG | + | chr4.4:70193150-70193169 | MS.gene93911:CDS | 45.0% |
| ! | GCAGCTAGGTTGAGGTATAA+AGG | + | chr4.4:70193139-70193158 | MS.gene93911:CDS | 45.0% |
| ! | GCTAGGTTGAGGTATAAAGG+AGG | + | chr4.4:70193142-70193161 | MS.gene93911:CDS | 45.0% |
| ! | GTATAAAGGAGGGCATAAGG+TGG | + | chr4.4:70193153-70193172 | MS.gene93911:CDS | 45.0% |
| ! | TACTGAGTTGGAGAGACTCA+AGG | + | chr4.4:70195207-70195226 | MS.gene93911:CDS | 45.0% |
| ! | TCAACTGATTCACGTCGAAG+TGG | - | chr4.4:70194729-70194748 | None:intergenic | 45.0% |
| ! | TCTTTGCGTTTTCGAAGGAG+AGG | + | chr4.4:70193356-70193375 | MS.gene93911:CDS | 45.0% |
| !! | CCGGAATTTGCTACCTATGA+AGG | + | chr4.4:70194218-70194237 | MS.gene93911:CDS | 45.0% |
| !! | GGATTTGGAATTACCGGTTC+CGG | + | chr4.4:70194979-70194998 | MS.gene93911:CDS | 45.0% |
| AACTCGGGATACTTAGTGCC+CGG | + | chr4.4:70194199-70194218 | MS.gene93911:CDS | 50.0% | |
| ACCCCGCCTCAAGACAAATT+CGG | - | chr4.4:70194092-70194111 | None:intergenic | 50.0% | |
| ATCCACCTCACATGGATGCT+AGG | + | chr4.4:70195009-70195028 | MS.gene93911:CDS | 50.0% | |
| ATTGGAGACCGGAAAGCTTC+CGG | + | chr4.4:70193975-70193994 | MS.gene93911:CDS | 50.0% | |
| CAATCTGCATGGCCTGATAG+CGG | - | chr4.4:70194677-70194696 | None:intergenic | 50.0% | |
| CATGGATGCTAGGCTTTCAC+AGG | + | chr4.4:70195019-70195038 | MS.gene93911:CDS | 50.0% | |
| CGTCTTCGAAACACTTGAGG+AGG | + | chr4.4:70194157-70194176 | MS.gene93911:CDS | 50.0% | |
| CTATACCACTGAGGAGCCAA+AGG | - | chr4.4:70193502-70193521 | None:intergenic | 50.0% | |
| CTATCAGGCCATGCAGATTG+TGG | + | chr4.4:70194677-70194696 | MS.gene93911:CDS | 50.0% | |
| CTCCGAATTTGTCTTGAGGC+GGG | + | chr4.4:70194087-70194106 | MS.gene93911:CDS | 50.0% | |
| GAAAGCCTAGCATCCATGTG+AGG | - | chr4.4:70195017-70195036 | None:intergenic | 50.0% | |
| GCTTCTGTTAGGGTTCAGCT+AGG | + | chr4.4:70193763-70193782 | MS.gene93911:CDS | 50.0% | |
| GGCTCCTCAGTGGTATAGAT+TGG | + | chr4.4:70193504-70193523 | MS.gene93911:CDS | 50.0% | |
| GGTAGAGTCCAAACTGTGGT+TGG | + | chr4.4:70195149-70195168 | MS.gene93911:CDS | 50.0% | |
| GTTCCGCAAAGATTGGAGAC+CGG | + | chr4.4:70193964-70193983 | MS.gene93911:CDS | 50.0% | |
| TACCTCAACCTAGCTGCAAG+TGG | - | chr4.4:70193136-70193155 | None:intergenic | 50.0% | |
| TCCGAATTTGTCTTGAGGCG+GGG | + | chr4.4:70194088-70194107 | MS.gene93911:CDS | 50.0% | |
| TCTTCATGCTGCGTCATCCT+CGG | + | chr4.4:70195318-70195337 | MS.gene93911:CDS | 50.0% | |
| TGAGGAGCCAAAGGACTATC+CGG | - | chr4.4:70193493-70193512 | None:intergenic | 50.0% | |
| TGTGGTCACTGCTACCATTG+AGG | - | chr4.4:70194413-70194432 | None:intergenic | 50.0% | |
| TTGACACACTGTCCCCTAGA+TGG | + | chr4.4:70194316-70194335 | MS.gene93911:CDS | 50.0% | |
| TTGAGCTCTTTCGCCTTGAG+TGG | - | chr4.4:70195183-70195202 | None:intergenic | 50.0% | |
| ! | ACTGATTCACGTCGAAGTGG+CGG | - | chr4.4:70194726-70194745 | None:intergenic | 50.0% |
| ! | ATAGTCCTTTGGCTCCTCAG+TGG | + | chr4.4:70193494-70193513 | MS.gene93911:CDS | 50.0% |
| ! | CATTGATTGGCTCCGCTATC+AGG | + | chr4.4:70194662-70194681 | MS.gene93911:CDS | 50.0% |
| ! | GACAGATTGAGAAGTGTGGG+AGG | + | chr4.4:70195128-70195147 | MS.gene93911:CDS | 50.0% |
| ! | GGCAATTTGCTTCGAAACCG+AGG | - | chr4.4:70195338-70195357 | None:intergenic | 50.0% |
| ! | TCCATGTGAGGTGGATTCCT+TGG | - | chr4.4:70195005-70195024 | None:intergenic | 50.0% |
| ! | TGTGGCAGCTGAACCTTTTG+AGG | + | chr4.4:70193858-70193877 | MS.gene93911:CDS | 50.0% |
| ACGAGCATCCGGAAGCTTTC+CGG | - | chr4.4:70193986-70194005 | None:intergenic | 55.0% | |
| AGCCTAGCATCCATGTGAGG+TGG | - | chr4.4:70195014-70195033 | None:intergenic | 55.0% | |
| CACCACTTGCAGCTAGGTTG+AGG | + | chr4.4:70193131-70193150 | MS.gene93911:CDS | 55.0% | |
| CCATGCAGATTGTGGCAGCA+AGG | + | chr4.4:70194685-70194704 | MS.gene93911:CDS | 55.0% | |
| CCTCTCGAATACGCGATCGA+AGG | + | chr4.4:70193651-70193670 | MS.gene93911:CDS | 55.0% | |
| CCTTCGATCGCGTATTCGAG+AGG | - | chr4.4:70193654-70193673 | None:intergenic | 55.0% | |
| CCTTGCTGCCACAATCTGCA+TGG | - | chr4.4:70194688-70194707 | None:intergenic | 55.0% | |
| CTCAACCTAGCTGCAAGTGG+TGG | - | chr4.4:70193133-70193152 | None:intergenic | 55.0% | |
| CTTCATAGACCTAGCGCGGT+CGG | + | chr4.4:70194015-70194034 | MS.gene93911:CDS | 55.0% | |
| GAAAGCTTCCGGATGCTCGT+TGG | + | chr4.4:70193986-70194005 | MS.gene93911:CDS | 55.0% | |
| GCATCAGAATGCCATGCCTC+AGG | - | chr4.4:70193610-70193629 | None:intergenic | 55.0% | |
| GCCAAGGAATCCACCTCACA+TGG | + | chr4.4:70195001-70195020 | MS.gene93911:CDS | 55.0% | |
| GGGAGGTAGAGTCCAAACTG+TGG | + | chr4.4:70195145-70195164 | MS.gene93911:CDS | 55.0% | |
| GGTCACTGCTACCATTGAGG+TGG | - | chr4.4:70194410-70194429 | None:intergenic | 55.0% | |
| TTCATAGACCTAGCGCGGTC+GGG | + | chr4.4:70194016-70194035 | MS.gene93911:CDS | 55.0% | |
| ! | TGTGAGGTGGATTCCTTGGC+CGG | - | chr4.4:70195001-70195020 | None:intergenic | 55.0% |
| CAGCTCCACCACTTGCAGCT+AGG | + | chr4.4:70193125-70193144 | MS.gene93911:CDS | 60.0% | |
| CTATCCGGCGGAACCCTAAC+CGG | - | chr4.4:70193478-70193497 | None:intergenic | 60.0% | |
| GAGAGCTGCACTTGGCTGTG+AGG | + | chr4.4:70194547-70194566 | MS.gene93911:CDS | 60.0% | |
| GGAGCCAAAGGACTATCCGG+CGG | - | chr4.4:70193490-70193509 | None:intergenic | 60.0% | |
| GGTTCCGCCGGATAGTCCTT+TGG | + | chr4.4:70193483-70193502 | MS.gene93911:CDS | 60.0% | |
| GTGGATTCCTTGGCCGGAAC+CGG | - | chr4.4:70194995-70195014 | None:intergenic | 60.0% | |
| TCATAGACCTAGCGCGGTCG+GGG | + | chr4.4:70194017-70194036 | MS.gene93911:CDS | 60.0% | |
| !! | GGAATTACCGGTTCCGGCCA+AGG | + | chr4.4:70194985-70195004 | MS.gene93911:CDS | 60.0% |
| CGCGGTCGGGGAGGAAGAAA+CGG | + | chr4.4:70194029-70194048 | MS.gene93911:CDS | 65.0% | |
| !! | AGTGCCGGTTAGGGTTCCGC+CGG | + | chr4.4:70193471-70193490 | MS.gene93911:CDS | 65.0% |
| TAGACCTAGCGCGGTCGGGG+AGG | + | chr4.4:70194020-70194039 | MS.gene93911:CDS | 70.0% | |
| TCTTCCTCCCCGACCGCGCT+AGG | - | chr4.4:70194027-70194046 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 70193088 | 70195415 | 70193088 | ID=MS.gene93911 |
| chr4.4 | mRNA | 70193088 | 70195415 | 70193088 | ID=MS.gene93911.t1;Parent=MS.gene93911 |
| chr4.4 | exon | 70193088 | 70195415 | 70193088 | ID=MS.gene93911.t1.exon1;Parent=MS.gene93911.t1 |
| chr4.4 | CDS | 70193088 | 70195415 | 70193088 | ID=cds.MS.gene93911.t1;Parent=MS.gene93911.t1 |
| Gene Sequence |
| Protein sequence |
