Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93913.t1 | XP_013455262.1 | 98.2 | 775 | 14 | 0 | 1 | 775 | 270 | 1044 | 0.00E+00 | 1541.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93913.t1 | Q60EW9 | 64.8 | 778 | 262 | 7 | 2 | 775 | 5 | 774 | 2.2e-302 | 1039.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93913.t1 | A0A072UJM2 | 98.2 | 775 | 14 | 0 | 1 | 775 | 270 | 1044 | 0.0e+00 | 1541.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene015570 | MS.gene93913 | PPI |
| MS.gene93913 | MS.gene072801 | PPI |
| MS.gene93913 | MS.gene030426 | PPI |
| MS.gene99080 | MS.gene93913 | PPI |
| MS.gene93913 | MS.gene68918 | PPI |
| MS.gene048777 | MS.gene93913 | PPI |
| MS.gene93913 | MS.gene50295 | PPI |
| MS.gene93913 | MS.gene070339 | PPI |
| MS.gene050376 | MS.gene93913 | PPI |
| MS.gene93913 | MS.gene048780 | PPI |
| MS.gene066619 | MS.gene93913 | PPI |
| MS.gene93913 | MS.gene72170 | PPI |
| MS.gene019289 | MS.gene93913 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93913.t1 | MTR_4g033215 | 98.194 | 775 | 14 | 0 | 1 | 775 | 270 | 1044 | 0.0 | 1596 |
| MS.gene93913.t1 | MTR_7g092770 | 64.903 | 775 | 259 | 8 | 7 | 775 | 8 | 775 | 0.0 | 1065 |
| MS.gene93913.t1 | MTR_0305s0020 | 65.806 | 775 | 251 | 9 | 7 | 775 | 8 | 774 | 0.0 | 1047 |
| MS.gene93913.t1 | MTR_4g066150 | 64.258 | 775 | 268 | 6 | 2 | 775 | 4 | 770 | 0.0 | 1038 |
| MS.gene93913.t1 | MTR_5g010390 | 62.868 | 781 | 276 | 8 | 4 | 775 | 232 | 1007 | 0.0 | 1033 |
| MS.gene93913.t1 | MTR_3g027150 | 60.000 | 790 | 293 | 6 | 7 | 775 | 35 | 822 | 0.0 | 998 |
| MS.gene93913.t1 | MTR_0291s0010 | 59.217 | 792 | 303 | 7 | 2 | 775 | 8 | 797 | 0.0 | 990 |
| MS.gene93913.t1 | MTR_4g023460 | 61.508 | 756 | 285 | 3 | 25 | 775 | 388 | 1142 | 0.0 | 988 |
| MS.gene93913.t1 | MTR_7g076900 | 55.400 | 787 | 325 | 9 | 7 | 775 | 235 | 1013 | 0.0 | 907 |
| MS.gene93913.t1 | MTR_8g031270 | 56.082 | 781 | 321 | 10 | 7 | 775 | 233 | 1003 | 0.0 | 899 |
| MS.gene93913.t1 | MTR_4g057675 | 50.699 | 787 | 359 | 11 | 3 | 775 | 12 | 783 | 0.0 | 767 |
| MS.gene93913.t1 | MTR_4g071870 | 48.539 | 787 | 342 | 12 | 3 | 775 | 12 | 749 | 0.0 | 731 |
| MS.gene93913.t1 | MTR_4g107850 | 49.738 | 764 | 335 | 16 | 33 | 775 | 303 | 1038 | 0.0 | 729 |
| MS.gene93913.t1 | MTR_6g027540 | 47.963 | 761 | 353 | 12 | 33 | 775 | 274 | 1009 | 0.0 | 710 |
| MS.gene93913.t1 | MTR_6g028050 | 44.837 | 765 | 380 | 14 | 31 | 775 | 284 | 1026 | 0.0 | 675 |
| MS.gene93913.t1 | MTR_1g015540 | 44.882 | 762 | 385 | 13 | 28 | 770 | 23 | 768 | 0.0 | 613 |
| MS.gene93913.t1 | MTR_5g096980 | 37.582 | 761 | 442 | 13 | 29 | 775 | 22 | 763 | 1.15e-170 | 510 |
| MS.gene93913.t1 | MTR_4g023250 | 60.000 | 130 | 50 | 1 | 645 | 774 | 1 | 128 | 1.78e-49 | 170 |
| MS.gene93913.t1 | MTR_4g023230 | 47.541 | 122 | 49 | 1 | 562 | 683 | 49 | 155 | 3.11e-30 | 117 |
| MS.gene93913.t1 | MTR_4g023390 | 47.115 | 104 | 33 | 2 | 648 | 751 | 16 | 97 | 1.39e-22 | 93.2 |
| MS.gene93913.t1 | MTR_4g023240 | 60.000 | 60 | 24 | 0 | 496 | 555 | 10 | 69 | 7.94e-16 | 73.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93913.t1 | AT1G22610 | 79.692 | 778 | 153 | 1 | 3 | 775 | 252 | 1029 | 0.0 | 1312 |
| MS.gene93913.t1 | AT3G57880 | 66.150 | 774 | 249 | 8 | 7 | 775 | 8 | 773 | 0.0 | 1070 |
| MS.gene93913.t1 | AT3G57880 | 66.150 | 774 | 249 | 8 | 7 | 775 | 8 | 773 | 0.0 | 1070 |
| MS.gene93913.t1 | AT3G57880 | 66.150 | 774 | 249 | 8 | 7 | 775 | 8 | 773 | 0.0 | 1070 |
| MS.gene93913.t1 | AT3G57880 | 66.150 | 774 | 249 | 8 | 7 | 775 | 8 | 773 | 0.0 | 1070 |
| MS.gene93913.t1 | AT1G51570 | 65.464 | 776 | 254 | 8 | 7 | 775 | 8 | 776 | 0.0 | 1057 |
| MS.gene93913.t1 | AT5G12970 | 64.903 | 775 | 262 | 7 | 2 | 775 | 4 | 769 | 0.0 | 1044 |
| MS.gene93913.t1 | AT4G11610 | 62.868 | 781 | 275 | 9 | 4 | 775 | 237 | 1011 | 0.0 | 1021 |
| MS.gene93913.t1 | AT4G11610 | 62.868 | 781 | 275 | 9 | 4 | 775 | 233 | 1007 | 0.0 | 1020 |
| MS.gene93913.t1 | AT4G11610 | 62.868 | 781 | 275 | 9 | 4 | 775 | 100 | 874 | 0.0 | 1020 |
| MS.gene93913.t1 | AT5G06850 | 59.010 | 788 | 307 | 4 | 3 | 775 | 8 | 794 | 0.0 | 996 |
| MS.gene93913.t1 | AT5G48060 | 61.265 | 759 | 285 | 6 | 25 | 775 | 279 | 1036 | 0.0 | 981 |
| MS.gene93913.t1 | AT4G00700 | 55.089 | 786 | 330 | 10 | 6 | 775 | 228 | 1006 | 0.0 | 880 |
| MS.gene93913.t1 | AT4G00700 | 55.089 | 786 | 330 | 10 | 6 | 775 | 228 | 1006 | 0.0 | 880 |
| MS.gene93913.t1 | AT3G61300 | 54.113 | 778 | 324 | 14 | 6 | 775 | 220 | 972 | 0.0 | 872 |
| MS.gene93913.t1 | AT1G04150 | 54.293 | 792 | 319 | 13 | 7 | 775 | 241 | 1012 | 0.0 | 849 |
| MS.gene93913.t1 | AT4G20080 | 50.258 | 776 | 362 | 11 | 8 | 775 | 15 | 774 | 0.0 | 806 |
| MS.gene93913.t1 | AT1G74720 | 49.161 | 775 | 351 | 15 | 28 | 775 | 323 | 1081 | 0.0 | 736 |
| MS.gene93913.t1 | AT3G03680 | 47.903 | 787 | 352 | 16 | 16 | 775 | 262 | 1017 | 0.0 | 722 |
| MS.gene93913.t1 | AT5G17980 | 46.447 | 760 | 368 | 16 | 31 | 775 | 314 | 1049 | 0.0 | 684 |
| MS.gene93913.t1 | AT3G61720 | 36.375 | 789 | 431 | 23 | 31 | 774 | 32 | 794 | 6.85e-149 | 455 |
| MS.gene93913.t1 | AT5G03435 | 36.551 | 777 | 436 | 22 | 7 | 769 | 7 | 740 | 1.39e-142 | 437 |
| MS.gene93913.t1 | AT5G03435 | 38.927 | 578 | 316 | 14 | 7 | 575 | 7 | 556 | 6.57e-121 | 375 |
| MS.gene93913.t1 | AT5G44760 | 42.289 | 402 | 186 | 10 | 7 | 404 | 5 | 364 | 9.05e-93 | 298 |
| MS.gene93913.t1 | AT5G44760 | 23.392 | 513 | 260 | 15 | 201 | 677 | 36 | 451 | 1.25e-17 | 87.0 |
| MS.gene93913.t1 | AT1G03370 | 39.024 | 123 | 71 | 3 | 42 | 163 | 3 | 122 | 1.68e-14 | 78.2 |
| MS.gene93913.t1 | AT1G03370 | 39.024 | 123 | 71 | 3 | 42 | 163 | 3 | 122 | 2.15e-14 | 77.8 |
Find 0 sgRNAs with CRISPR-Local
Find 213 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACAATTATAATATCCTCAAA+AGG | + | 33274:7414-7433 | None:intergenic | 20.0% |
| !! | ATAATTGCTATAAATTGGAA+TGG | + | 33274:8830-8849 | None:intergenic | 20.0% |
| !! | CAACTATAATTGCTATAAAT+TGG | + | 33274:8835-8854 | None:intergenic | 20.0% |
| !! | CAATTTATAGCAATTATAGT+TGG | - | 33274:8833-8852 | MS.gene93913:CDS | 20.0% |
| !!! | ATTCTAAGATAATAAAGCTT+AGG | + | 33274:7228-7247 | None:intergenic | 20.0% |
| ! | AACAAGTAAAGAAAAATGGT+TGG | + | 33274:8491-8510 | None:intergenic | 25.0% |
| ! | AATCTCTTGAAGAAATTAAC+TGG | + | 33274:8908-8927 | None:intergenic | 25.0% |
| ! | ATAGATTGGAGGATAAAAAA+GGG | - | 33274:7058-7077 | MS.gene93913:CDS | 25.0% |
| ! | CACAAACAAGTAAAGAAAAA+TGG | + | 33274:8495-8514 | None:intergenic | 25.0% |
| ! | CCTAACAATATTGAAATCTT+GGG | - | 33274:7456-7475 | MS.gene93913:CDS | 25.0% |
| ! | TATAGATTGGAGGATAAAAA+AGG | - | 33274:7057-7076 | MS.gene93913:CDS | 25.0% |
| ! | TATTATAATTGTGACAGTTG+AGG | - | 33274:7422-7441 | MS.gene93913:CDS | 25.0% |
| ! | TCCTAACAATATTGAAATCT+TGG | - | 33274:7455-7474 | MS.gene93913:CDS | 25.0% |
| ! | TTCACATACAAAAAATGCAT+TGG | + | 33274:6742-6761 | None:intergenic | 25.0% |
| ! | TTCTTTACTTGTTTGTGATT+GGG | - | 33274:8498-8517 | MS.gene93913:CDS | 25.0% |
| ! | TTTCTTTACTTGTTTGTGAT+TGG | - | 33274:8497-8516 | MS.gene93913:CDS | 25.0% |
| !! | ATCAGTAAAGATGATTTTGT+TGG | - | 33274:6964-6983 | MS.gene93913:CDS | 25.0% |
| !! | TACTCATTATTATCCTCTTT+TGG | - | 33274:8034-8053 | MS.gene93913:CDS | 25.0% |
| AAAGGGATGAAGATAAATCA+TGG | - | 33274:7075-7094 | MS.gene93913:CDS | 30.0% | |
| ACAATATTGAAATCTTGGGA+AGG | - | 33274:7460-7479 | MS.gene93913:CDS | 30.0% | |
| CAATATTGAAATCTTGGGAA+GGG | - | 33274:7461-7480 | MS.gene93913:CDS | 30.0% | |
| CCCAAGATTTCAATATTGTT+AGG | + | 33274:7459-7478 | None:intergenic | 30.0% | |
| TCAGATCATTGTATCTGATT+TGG | + | 33274:8936-8955 | None:intergenic | 30.0% | |
| TGACATTATGCGATGAAAAT+TGG | + | 33274:8342-8361 | None:intergenic | 30.0% | |
| TTTACTTGAAGTTACTGTGA+AGG | - | 33274:6930-6949 | MS.gene93913:CDS | 30.0% | |
| ! | AAGAAATTAACTGGTACTGA+TGG | + | 33274:8899-8918 | None:intergenic | 30.0% |
| ! | GATTTGGTTACTCATGATAA+AGG | - | 33274:7267-7286 | MS.gene93913:CDS | 30.0% |
| ! | GGTTGAACATAATGCATTTT+GGG | + | 33274:8167-8186 | None:intergenic | 30.0% |
| ! | GTAAAGATGATTTTGTTGGT+AGG | - | 33274:6968-6987 | MS.gene93913:CDS | 30.0% |
| !! | ATCATTGTATCTGATTTGGA+AGG | + | 33274:8932-8951 | None:intergenic | 30.0% |
| !! | CCTAATGGGTTAAAAAAGAA+TGG | - | 33274:8065-8084 | MS.gene93913:CDS | 30.0% |
| !!! | CCATTCTTTTTTAACCCATT+AGG | + | 33274:8068-8087 | None:intergenic | 30.0% |
| !!! | TTTTGGTTCTTCAACCTAAT+GGG | - | 33274:8051-8070 | MS.gene93913:CDS | 30.0% |
| AACATTGGATATCTCGAACT+CGG | - | 33274:7723-7742 | MS.gene93913:CDS | 35.0% | |
| AACCCATTTGTTTCCATACT+TGG | + | 33274:7820-7839 | None:intergenic | 35.0% | |
| AAGTCAGATGAGATTCACAA+GGG | - | 33274:7326-7345 | MS.gene93913:CDS | 35.0% | |
| AATTCCTCATCCAATTCATC+TGG | + | 33274:8599-8618 | None:intergenic | 35.0% | |
| ACTTGTTTGTGATTGGGATT+TGG | - | 33274:8504-8523 | MS.gene93913:CDS | 35.0% | |
| AGTGATTGAAGCTCAAGATT+TGG | - | 33274:7251-7270 | MS.gene93913:CDS | 35.0% | |
| AGTTGAGTATATGCTTGATG+TGG | - | 33274:8283-8302 | MS.gene93913:CDS | 35.0% | |
| ATAAGAATCAGCATCCTGTT+TGG | - | 33274:6866-6885 | MS.gene93913:CDS | 35.0% | |
| ATGGAATGAGCAGTATACAT+GGG | - | 33274:7875-7894 | MS.gene93913:CDS | 35.0% | |
| ATTACCATATGTGGAGTCTA+AGG | - | 33274:8306-8325 | MS.gene93913:CDS | 35.0% | |
| CAAAGATCAGAGAATTGGAA+AGG | - | 33274:7971-7990 | MS.gene93913:CDS | 35.0% | |
| CAAGTTTCACTTCCACATAA+GGG | + | 33274:6816-6835 | None:intergenic | 35.0% | |
| CATATTCTGGATTCTGCTTT+GGG | + | 33274:6633-6652 | None:intergenic | 35.0% | |
| GAACAAGGCAAGTTGTAATT+GGG | + | 33274:8424-8443 | None:intergenic | 35.0% | |
| GAATTGGAAAGGTGAGAATA+AGG | - | 33274:7982-8001 | MS.gene93913:CDS | 35.0% | |
| GTTTGATCTTAATGAAGTGC+CGG | - | 33274:6996-7015 | MS.gene93913:CDS | 35.0% | |
| TACCTGTTAGACACATTGAT+TGG | - | 33274:8189-8208 | MS.gene93913:CDS | 35.0% | |
| TATACTGCTCATTCCATCTA+GGG | + | 33274:7872-7891 | None:intergenic | 35.0% | |
| TCAAGAACAAGACATGAACA+AGG | + | 33274:8439-8458 | None:intergenic | 35.0% | |
| TCAATGTGTCTAACAGGTAT+CGG | + | 33274:8188-8207 | None:intergenic | 35.0% | |
| TGAACAAGGCAAGTTGTAAT+TGG | + | 33274:8425-8444 | None:intergenic | 35.0% | |
| TGCCAAGTATGGAAACAAAT+GGG | - | 33274:7815-7834 | MS.gene93913:CDS | 35.0% | |
| TTCCAATTCTCTGATCTTTG+TGG | + | 33274:7971-7990 | None:intergenic | 35.0% | |
| TTGCCAAGTATGGAAACAAA+TGG | - | 33274:7814-7833 | MS.gene93913:CDS | 35.0% | |
| ! | CGGTTGAACATAATGCATTT+TGG | + | 33274:8168-8187 | None:intergenic | 35.0% |
| ! | GTGAAACTTGGTAACTACAA+AGG | - | 33274:6826-6845 | MS.gene93913:CDS | 35.0% |
| ! | GTTTTACTGCTGTGTGTAAA+TGG | - | 33274:8372-8391 | MS.gene93913:CDS | 35.0% |
| ! | TGATTGGGATTTGGAATTAC+CGG | - | 33274:8513-8532 | MS.gene93913:CDS | 35.0% |
| ! | TTGATGTGGATTACCATATG+TGG | - | 33274:8297-8316 | MS.gene93913:CDS | 35.0% |
| !! | AATTATGCTTGCTGTTTGGA+TGG | - | 33274:7101-7120 | MS.gene93913:CDS | 35.0% |
| !! | ATTATGCTTGCTGTTTGGAT+GGG | - | 33274:7102-7121 | MS.gene93913:CDS | 35.0% |
| !! | GTGAAATTATGCTTGCTGTT+TGG | - | 33274:7097-7116 | MS.gene93913:CDS | 35.0% |
| !! | TAATGCATTTTGGGAAGCAA+AGG | + | 33274:8158-8177 | None:intergenic | 35.0% |
| !! | TTAGGTTGAAGAACCAAAAG+AGG | + | 33274:8050-8069 | None:intergenic | 35.0% |
| !!! | CTTTTGGTTCTTCAACCTAA+TGG | - | 33274:8050-8069 | MS.gene93913:CDS | 35.0% |
| ACAAGGGTTTCTCAAATGAG+AGG | - | 33274:7342-7361 | MS.gene93913:CDS | 40.0% | |
| ACATTGGATATCTCGAACTC+GGG | - | 33274:7724-7743 | MS.gene93913:CDS | 40.0% | |
| AGCAAAAGAACTTCCTGTGA+TGG | - | 33274:6771-6790 | MS.gene93913:CDS | 40.0% | |
| AGCCAATCAATGTGTCTAAC+AGG | + | 33274:8194-8213 | None:intergenic | 40.0% | |
| AGCTTGTCATCCAGATGAAT+TGG | - | 33274:8586-8605 | MS.gene93913:CDS | 40.0% | |
| AGTTCCACAAGCTTCTGTTA+GGG | - | 33274:7293-7312 | MS.gene93913:CDS | 40.0% | |
| ATAAGCTCCTCGTTCCAAAT+AGG | + | 33274:7375-7394 | None:intergenic | 40.0% | |
| ATACTGCTCATTCCATCTAG+GGG | + | 33274:7871-7890 | None:intergenic | 40.0% | |
| ATGGTTGGCAGTATCAATTC+AGG | + | 33274:8476-8495 | None:intergenic | 40.0% | |
| CACTTGAGGAGGAAAAACAT+TGG | - | 33274:7708-7727 | MS.gene93913:CDS | 40.0% | |
| CATCATCTTCTCACTGATCT+GGG | - | 33274:8784-8803 | MS.gene93913:CDS | 40.0% | |
| CCAAGTTTCACTTCCACATA+AGG | + | 33274:6817-6836 | None:intergenic | 40.0% | |
| CCTTATGTGGAAGTGAAACT+TGG | - | 33274:6814-6833 | MS.gene93913:CDS | 40.0% | |
| CCTTCATAGGTAGCAAATTC+CGG | + | 33274:7761-7780 | None:intergenic | 40.0% | |
| CTAAATCTCCAACCACAGTT+TGG | + | 33274:8700-8719 | None:intergenic | 40.0% | |
| CTCATTCGAACAATATCAGC+AGG | + | 33274:8644-8663 | None:intergenic | 40.0% | |
| CTGCTGATATTGTTCGAATG+AGG | - | 33274:8642-8661 | MS.gene93913:CDS | 40.0% | |
| CTTCATAGGTAGCAAATTCC+GGG | + | 33274:7760-7779 | None:intergenic | 40.0% | |
| CTTCCTGTTATATCCATCAC+AGG | + | 33274:6787-6806 | None:intergenic | 40.0% | |
| GAAGTCAGATGAGATTCACA+AGG | - | 33274:7325-7344 | MS.gene93913:CDS | 40.0% | |
| GAATCCAGAATATGCATTGG+TGG | - | 33274:6639-6658 | MS.gene93913:CDS | 40.0% | |
| GACCACAAAGATCAGAGAAT+TGG | - | 33274:7966-7985 | MS.gene93913:CDS | 40.0% | |
| GAGAAATGTTCCGCAAAGAT+TGG | - | 33274:7497-7516 | MS.gene93913:CDS | 40.0% | |
| GATGGAATGAGCAGTATACA+TGG | - | 33274:7874-7893 | MS.gene93913:CDS | 40.0% | |
| GCAGAATCCAGAATATGCAT+TGG | - | 33274:6636-6655 | MS.gene93913:CDS | 40.0% | |
| GCATATTCTGGATTCTGCTT+TGG | + | 33274:6634-6653 | None:intergenic | 40.0% | |
| GTATACTGCTCATTCCATCT+AGG | + | 33274:7873-7892 | None:intergenic | 40.0% | |
| GTGACAGTTGAGGACAAATT+TGG | - | 33274:7432-7451 | MS.gene93913:CDS | 40.0% | |
| GTTTCCACCAATGCATATTC+TGG | + | 33274:6646-6665 | None:intergenic | 40.0% | |
| TAAGCTCCTCGTTCCAAATA+GGG | + | 33274:7374-7393 | None:intergenic | 40.0% | |
| TCATCATCTTCTCACTGATC+TGG | - | 33274:8783-8802 | MS.gene93913:CDS | 40.0% | |
| TCATCCAGATGAATTGGATG+AGG | - | 33274:8592-8611 | MS.gene93913:CDS | 40.0% | |
| TCATCTCCGAATTTGTCTTG+AGG | - | 33274:7623-7642 | MS.gene93913:CDS | 40.0% | |
| TCGCATAATGTCACTACTCT+CGG | - | 33274:8349-8368 | MS.gene93913:CDS | 40.0% | |
| TGGTTGGCAGTATCAATTCA+GGG | + | 33274:8475-8494 | None:intergenic | 40.0% | |
| TTCTCCTTAGACTCCACATA+TGG | + | 33274:8313-8332 | None:intergenic | 40.0% | |
| TTGCACAGCTTGGGTTAATA+TGG | - | 33274:8115-8134 | MS.gene93913:CDS | 40.0% | |
| TTTGACAATCACCACCTCAA+TGG | - | 33274:7936-7955 | MS.gene93913:CDS | 40.0% | |
| ! | ATATCAGCAGGTCTTGTAGT+TGG | + | 33274:8632-8651 | None:intergenic | 40.0% |
| ! | CTAGGTTGAGGTATAAAGGA+GGG | - | 33274:6683-6702 | MS.gene93913:CDS | 40.0% |
| ! | CTTTAACCCTATTTGGAACG+AGG | - | 33274:7365-7384 | MS.gene93913:CDS | 40.0% |
| ! | GCAAAGATTTGCTTCCAAAC+AGG | + | 33274:6883-6902 | None:intergenic | 40.0% |
| ! | GCAAATCTTTGCGTTTTCGA+AGG | - | 33274:6891-6910 | MS.gene93913:CDS | 40.0% |
| ! | TACGACAGATTGAGAAGTGT+GGG | - | 33274:8665-8684 | MS.gene93913:CDS | 40.0% |
| ! | TGAGAGGCTTTAACCCTATT+TGG | - | 33274:7358-7377 | MS.gene93913:CDS | 40.0% |
| !! | ATCTTAATGAAGTGCCGGTT+AGG | - | 33274:7001-7020 | MS.gene93913:CDS | 40.0% |
| !! | CGGAATTTGCTACCTATGAA+GGG | - | 33274:7759-7778 | MS.gene93913:CDS | 40.0% |
| !! | CTTCCTGTGATGGATATAAC+AGG | - | 33274:6781-6800 | MS.gene93913:CDS | 40.0% |
| !! | TCTTAATGAAGTGCCGGTTA+GGG | - | 33274:7002-7021 | MS.gene93913:CDS | 40.0% |
| AAAGAATGGAGAGCTGCACT+TGG | - | 33274:8079-8098 | MS.gene93913:CDS | 45.0% | |
| AACCGTCTTCGAAACACTTG+AGG | - | 33274:7694-7713 | MS.gene93913:CDS | 45.0% | |
| AGATTGAACCAACGAGCATC+CGG | + | 33274:7537-7556 | None:intergenic | 45.0% | |
| AGGAAGTCTTGACCCTTATG+TGG | - | 33274:6801-6820 | MS.gene93913:CDS | 45.0% | |
| CAATCTTCATAGACCTAGCG+CGG | - | 33274:7551-7570 | MS.gene93913:CDS | 45.0% | |
| CGCATAATGTCACTACTCTC+GGG | - | 33274:8350-8369 | MS.gene93913:CDS | 45.0% | |
| CTAACTGTGATCACAGTGCA+TGG | + | 33274:7912-7931 | None:intergenic | 45.0% | |
| CTACCATCTTTGCCCTTCAT+AGG | + | 33274:7774-7793 | None:intergenic | 45.0% | |
| CTACCTATGAAGGGCAAAGA+TGG | - | 33274:7768-7787 | MS.gene93913:CDS | 45.0% | |
| CTCCTCAAGTGTTTCGAAGA+CGG | + | 33274:7699-7718 | None:intergenic | 45.0% | |
| CTTGGGAAGGGAGATTATGT+CGG | - | 33274:7473-7492 | MS.gene93913:CDS | 45.0% | |
| GAACGAGGAGCTTATGTTTG+TGG | - | 33274:7380-7399 | MS.gene93913:CDS | 45.0% | |
| GAATGAGCAGTATACATGGG+AGG | - | 33274:7878-7897 | MS.gene93913:CDS | 45.0% | |
| GAGCTCAAGCTTTACTGAGT+TGG | - | 33274:8735-8754 | MS.gene93913:CDS | 45.0% | |
| GAGGTTTACTTGCACAGCTT+GGG | - | 33274:8106-8125 | MS.gene93913:CDS | 45.0% | |
| GAGTTCCACAAGCTTCTGTT+AGG | - | 33274:7292-7311 | MS.gene93913:CDS | 45.0% | |
| GCATACTGTGTTGCCAAGTA+TGG | - | 33274:7804-7823 | MS.gene93913:CDS | 45.0% | |
| GGAAGAAACGGAGAGAAAGA+AGG | - | 33274:7581-7600 | MS.gene93913:CDS | 45.0% | |
| GGCTTAACGACATTTGCACT+TGG | - | 33274:8393-8412 | MS.gene93913:CDS | 45.0% | |
| GTACGACAGATTGAGAAGTG+TGG | - | 33274:8664-8683 | MS.gene93913:CDS | 45.0% | |
| GTTGGAGATTTAGCCACTCA+AGG | - | 33274:8707-8726 | MS.gene93913:CDS | 45.0% | |
| TCCTCAGTGGTATAGATTGG+AGG | - | 33274:7047-7066 | MS.gene93913:CDS | 45.0% | |
| TCCTCCAATCTATACCACTG+AGG | + | 33274:7051-7070 | None:intergenic | 45.0% | |
| TCTCCGAATTTGTCTTGAGG+CGG | - | 33274:7626-7645 | MS.gene93913:CDS | 45.0% | |
| TGAACCCTAACAGAAGCTTG+TGG | + | 33274:7300-7319 | None:intergenic | 45.0% | |
| TGAGGTTTACTTGCACAGCT+TGG | - | 33274:8105-8124 | MS.gene93913:CDS | 45.0% | |
| TTTCCGGTCTCCAATCTTTG+CGG | + | 33274:7510-7529 | None:intergenic | 45.0% | |
| ! | ACTGAGTTGGAGAGACTCAA+GGG | - | 33274:8748-8767 | MS.gene93913:CDS | 45.0% |
| ! | AGCTGATGAGTCTTTTCCTG+AGG | - | 33274:7131-7150 | MS.gene93913:CDS | 45.0% |
| ! | ATGAGTCTTTTCCTGAGGCA+TGG | - | 33274:7136-7155 | MS.gene93913:CDS | 45.0% |
| ! | GAGGTATAAAGGAGGGCATA+AGG | - | 33274:6690-6709 | MS.gene93913:CDS | 45.0% |
| ! | GCAGCTAGGTTGAGGTATAA+AGG | - | 33274:6679-6698 | MS.gene93913:CDS | 45.0% |
| ! | GCTAGGTTGAGGTATAAAGG+AGG | - | 33274:6682-6701 | MS.gene93913:CDS | 45.0% |
| ! | GTATAAAGGAGGGCATAAGG+TGG | - | 33274:6693-6712 | MS.gene93913:CDS | 45.0% |
| ! | TACTGAGTTGGAGAGACTCA+AGG | - | 33274:8747-8766 | MS.gene93913:CDS | 45.0% |
| ! | TCAACTGATTCACGTCGAAG+TGG | + | 33274:8269-8288 | None:intergenic | 45.0% |
| ! | TCTTTGCGTTTTCGAAGGAG+AGG | - | 33274:6896-6915 | MS.gene93913:CDS | 45.0% |
| !! | CCGGAATTTGCTACCTATGA+AGG | - | 33274:7758-7777 | MS.gene93913:CDS | 45.0% |
| !! | GGATTTGGAATTACCGGTTC+CGG | - | 33274:8519-8538 | MS.gene93913:CDS | 45.0% |
| AACTCGGGATACTTAGTGCC+CGG | - | 33274:7739-7758 | MS.gene93913:CDS | 50.0% | |
| ACCCCGCCTCAAGACAAATT+CGG | + | 33274:7632-7651 | None:intergenic | 50.0% | |
| ATCCACCTCACATGGATGCT+AGG | - | 33274:8549-8568 | MS.gene93913:CDS | 50.0% | |
| ATTGGAGACCGGAAAGCTTC+CGG | - | 33274:7515-7534 | MS.gene93913:CDS | 50.0% | |
| CAATCTGCATGGCCTGATAG+CGG | + | 33274:8217-8236 | None:intergenic | 50.0% | |
| CATGGATGCTAGGCTTTCAC+AGG | - | 33274:8559-8578 | MS.gene93913:CDS | 50.0% | |
| CGTCTTCGAAACACTTGAGG+AGG | - | 33274:7697-7716 | MS.gene93913:CDS | 50.0% | |
| CTATACCACTGAGGAGCCAA+AGG | + | 33274:7042-7061 | None:intergenic | 50.0% | |
| CTATCAGGCCATGCAGATTG+TGG | - | 33274:8217-8236 | MS.gene93913:CDS | 50.0% | |
| CTCCGAATTTGTCTTGAGGC+GGG | - | 33274:7627-7646 | MS.gene93913:CDS | 50.0% | |
| GAAAGCCTAGCATCCATGTG+AGG | + | 33274:8557-8576 | None:intergenic | 50.0% | |
| GCTTCTGTTAGGGTTCAGCT+AGG | - | 33274:7303-7322 | MS.gene93913:CDS | 50.0% | |
| GGCTCCTCAGTGGTATAGAT+TGG | - | 33274:7044-7063 | MS.gene93913:CDS | 50.0% | |
| GGTAGAGTCCAAACTGTGGT+TGG | - | 33274:8689-8708 | MS.gene93913:CDS | 50.0% | |
| GTTCCGCAAAGATTGGAGAC+CGG | - | 33274:7504-7523 | MS.gene93913:CDS | 50.0% | |
| TACCTCAACCTAGCTGCAAG+TGG | + | 33274:6676-6695 | None:intergenic | 50.0% | |
| TCCGAATTTGTCTTGAGGCG+GGG | - | 33274:7628-7647 | MS.gene93913:CDS | 50.0% | |
| TCTTCATGCTGCGTCATCCT+CGG | - | 33274:8858-8877 | MS.gene93913:CDS | 50.0% | |
| TGAGGAGCCAAAGGACTATC+CGG | + | 33274:7033-7052 | None:intergenic | 50.0% | |
| TGTGGTCACTGCTACCATTG+AGG | + | 33274:7953-7972 | None:intergenic | 50.0% | |
| TTGACACACTGTCCCCTAGA+TGG | - | 33274:7856-7875 | MS.gene93913:CDS | 50.0% | |
| TTGAGCTCTTTCGCCTTGAG+TGG | + | 33274:8723-8742 | None:intergenic | 50.0% | |
| ! | ACTGATTCACGTCGAAGTGG+CGG | + | 33274:8266-8285 | None:intergenic | 50.0% |
| ! | ATAGTCCTTTGGCTCCTCAG+TGG | - | 33274:7034-7053 | MS.gene93913:CDS | 50.0% |
| ! | CATTGATTGGCTCCGCTATC+AGG | - | 33274:8202-8221 | MS.gene93913:CDS | 50.0% |
| ! | GACAGATTGAGAAGTGTGGG+AGG | - | 33274:8668-8687 | MS.gene93913:CDS | 50.0% |
| ! | GGCAATTTGCTTCGAAACCG+AGG | + | 33274:8878-8897 | None:intergenic | 50.0% |
| ! | TCCATGTGAGGTGGATTCCT+TGG | + | 33274:8545-8564 | None:intergenic | 50.0% |
| ! | TGTGGCAGCTGAACCTTTTG+AGG | - | 33274:7398-7417 | MS.gene93913:CDS | 50.0% |
| ACGAGCATCCGGAAGCTTTC+CGG | + | 33274:7526-7545 | None:intergenic | 55.0% | |
| AGCCTAGCATCCATGTGAGG+TGG | + | 33274:8554-8573 | None:intergenic | 55.0% | |
| CACCACTTGCAGCTAGGTTG+AGG | - | 33274:6671-6690 | MS.gene93913:CDS | 55.0% | |
| CCATGCAGATTGTGGCAGCA+AGG | - | 33274:8225-8244 | MS.gene93913:CDS | 55.0% | |
| CCTCTCGAATACGCGATCGA+AGG | - | 33274:7191-7210 | MS.gene93913:CDS | 55.0% | |
| CCTTCGATCGCGTATTCGAG+AGG | + | 33274:7194-7213 | None:intergenic | 55.0% | |
| CCTTGCTGCCACAATCTGCA+TGG | + | 33274:8228-8247 | None:intergenic | 55.0% | |
| CTCAACCTAGCTGCAAGTGG+TGG | + | 33274:6673-6692 | None:intergenic | 55.0% | |
| CTTCATAGACCTAGCGCGGT+CGG | - | 33274:7555-7574 | MS.gene93913:CDS | 55.0% | |
| GAAAGCTTCCGGATGCTCGT+TGG | - | 33274:7526-7545 | MS.gene93913:CDS | 55.0% | |
| GCATCAGAATGCCATGCCTC+AGG | + | 33274:7150-7169 | None:intergenic | 55.0% | |
| GCCAAGGAATCCACCTCACA+TGG | - | 33274:8541-8560 | MS.gene93913:CDS | 55.0% | |
| GGGAGGTAGAGTCCAAACTG+TGG | - | 33274:8685-8704 | MS.gene93913:CDS | 55.0% | |
| GGTCACTGCTACCATTGAGG+TGG | + | 33274:7950-7969 | None:intergenic | 55.0% | |
| TTCATAGACCTAGCGCGGTC+GGG | - | 33274:7556-7575 | MS.gene93913:CDS | 55.0% | |
| ! | TGTGAGGTGGATTCCTTGGC+CGG | + | 33274:8541-8560 | None:intergenic | 55.0% |
| CAGCTCCACCACTTGCAGCT+AGG | - | 33274:6665-6684 | MS.gene93913:CDS | 60.0% | |
| CTATCCGGCGGAACCCTAAC+CGG | + | 33274:7018-7037 | None:intergenic | 60.0% | |
| GAGAGCTGCACTTGGCTGTG+AGG | - | 33274:8087-8106 | MS.gene93913:CDS | 60.0% | |
| GGAGCCAAAGGACTATCCGG+CGG | + | 33274:7030-7049 | None:intergenic | 60.0% | |
| GGTTCCGCCGGATAGTCCTT+TGG | - | 33274:7023-7042 | MS.gene93913:CDS | 60.0% | |
| GTGGATTCCTTGGCCGGAAC+CGG | + | 33274:8535-8554 | None:intergenic | 60.0% | |
| TCATAGACCTAGCGCGGTCG+GGG | - | 33274:7557-7576 | MS.gene93913:CDS | 60.0% | |
| !! | GGAATTACCGGTTCCGGCCA+AGG | - | 33274:8525-8544 | MS.gene93913:CDS | 60.0% |
| CGCGGTCGGGGAGGAAGAAA+CGG | - | 33274:7569-7588 | MS.gene93913:CDS | 65.0% | |
| !! | AGTGCCGGTTAGGGTTCCGC+CGG | - | 33274:7011-7030 | MS.gene93913:CDS | 65.0% |
| TAGACCTAGCGCGGTCGGGG+AGG | - | 33274:7560-7579 | MS.gene93913:CDS | 70.0% | |
| TCTTCCTCCCCGACCGCGCT+AGG | + | 33274:7567-7586 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 33274 | gene | 6628 | 8955 | 6628 | ID=MS.gene93913 |
| 33274 | mRNA | 6628 | 8955 | 6628 | ID=MS.gene93913.t1;Parent=MS.gene93913 |
| 33274 | exon | 6628 | 8955 | 6628 | ID=MS.gene93913.t1.exon1;Parent=MS.gene93913.t1 |
| 33274 | CDS | 6628 | 8955 | 6628 | ID=cds.MS.gene93913.t1;Parent=MS.gene93913.t1 |
| Gene Sequence |
| Protein sequence |
